Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAAGAAAAGGAGATGCAAGAATTTTCATAATCTCAGGTTTGATCTTCCTTTGCATTATCTCGGGCGGTTTCCTCCTCTGTCTCTACCTTTTCCTCCCCGAATCGCAAACTCCCGATTGGTATCCGATCGTCGGGATCGTATTGGTTTCAACTCCCTGGATCTTTTGGCTTTTGGTTTATTTGCACCATTGCTTGAAACCTACCAAAGTTCAACTCAATGCCTTTGGCTCTAATAATAACTCATCTAACAACAAGACAGAGGCTAATAATAATAATGGTGGTGCAACAACTGAAGCCAATCTTGGTGAAGTTGAATCCCCTGGTGGAGGGAAACGCCGAGTGCATTTTGGTGCAGTGGTTGTCATGGGAAAACAGCCACAATTAGATAGGAATTTTAGCCATGAAAGCAATTCAAAACAGCCTACTACTATGGCTCCAAAGGAAAATGAAGTGCCATTCAGGTCGTCAACCTCGTCGTCTTAG
mRNA sequence
ATGGAAGAAAGAAAAGGAGATGCAAGAATTTTCATAATCTCAGGTTTGATCTTCCTTTGCATTATCTCGGGCGGTTTCCTCCTCTGTCTCTACCTTTTCCTCCCCGAATCGCAAACTCCCGATTGGTATCCGATCGTCGGGATCGTATTGGTTTCAACTCCCTGGATCTTTTGGCTTTTGGTTTATTTGCACCATTGCTTGAAACCTACCAAAGTTCAACTCAATGCCTTTGGCTCTAATAATAACTCATCTAACAACAAGACAGAGGCTAATAATAATAATGGTGGTGCAACAACTGAAGCCAATCTTGGTGAAGTTGAATCCCCTGGTGGAGGGAAACGCCGAGTGCATTTTGGTGCAGTGGTTGTCATGGGAAAACAGCCACAATTAGATAGGAATTTTAGCCATGAAAGCAATTCAAAACAGCCTACTACTATGGCTCCAAAGGAAAATGAAGTGCCATTCAGGTCGTCAACCTCGTCGTCTTAG
Coding sequence (CDS)
ATGGAAGAAAGAAAAGGAGATGCAAGAATTTTCATAATCTCAGGTTTGATCTTCCTTTGCATTATCTCGGGCGGTTTCCTCCTCTGTCTCTACCTTTTCCTCCCCGAATCGCAAACTCCCGATTGGTATCCGATCGTCGGGATCGTATTGGTTTCAACTCCCTGGATCTTTTGGCTTTTGGTTTATTTGCACCATTGCTTGAAACCTACCAAAGTTCAACTCAATGCCTTTGGCTCTAATAATAACTCATCTAACAACAAGACAGAGGCTAATAATAATAATGGTGGTGCAACAACTGAAGCCAATCTTGGTGAAGTTGAATCCCCTGGTGGAGGGAAACGCCGAGTGCATTTTGGTGCAGTGGTTGTCATGGGAAAACAGCCACAATTAGATAGGAATTTTAGCCATGAAAGCAATTCAAAACAGCCTACTACTATGGCTCCAAAGGAAAATGAAGTGCCATTCAGGTCGTCAACCTCGTCGTCTTAG
Protein sequence
MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNAFGSNNNSSNNKTEANNNNGGATTEANLGEVESPGGGKRRVHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPFRSSTSSS
Homology
BLAST of CcUC06G117800 vs. NCBI nr
Match:
XP_038875814.1 (uncharacterized protein LOC120068181 [Benincasa hispida])
HSP 1 Score: 270.4 bits (690), Expect = 1.0e-68
Identity = 141/164 (85.98%), Postives = 150/164 (91.46%), Query Frame = 0
Query: 1 MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLL 60
MEERKGDARIFIISGLIFLCIISGG LLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWL
Sbjct: 1 MEERKGDARIFIISGLIFLCIISGGILLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLS 60
Query: 61 VYLHHCLKPTKVQLNAFGSNNNSSNN-KTE-ANNNNGGATTEANLGEVESPGGGKRRVHF 120
+Y +HCLKPTKVQLNAFG NNN+S++ KTE AN N+GGAT E NLGEVESPG GKRRVHF
Sbjct: 61 IYFYHCLKPTKVQLNAFGPNNNNSHSKKTEAANYNDGGATIEGNLGEVESPGEGKRRVHF 120
Query: 121 GAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPFRSSTSSS 163
GAVVVM KQPQLDRN+SHES SKQPTTM+P+E EVP RSSTSSS
Sbjct: 121 GAVVVMEKQPQLDRNYSHESQSKQPTTMSPRETEVPLRSSTSSS 164
BLAST of CcUC06G117800 vs. NCBI nr
Match:
XP_004138999.1 (uncharacterized protein LOC101203715 [Cucumis sativus] >KAE8651759.1 hypothetical protein Csa_006785 [Cucumis sativus])
HSP 1 Score: 221.5 bits (563), Expect = 5.4e-54
Identity = 119/163 (73.01%), Postives = 134/163 (82.21%), Query Frame = 0
Query: 1 MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLL 60
MEERKGDARI IISGLIFLCII GGFLLCLYLFLPESQT DWYP +GIVLVSTPWIFWL
Sbjct: 15 MEERKGDARIVIISGLIFLCIILGGFLLCLYLFLPESQTSDWYPTIGIVLVSTPWIFWLS 74
Query: 61 VYLHHCLKPTKVQLNAFGSNN-NSSNNKTEANNNNGGATTEANLGEVESPGGGKRRVHFG 120
VY++HCLKPTKV LN FGSN+ NSS+ KTEA+ NN E ++G+ E+PGGGKR+VHFG
Sbjct: 75 VYIYHCLKPTKVLLNPFGSNSINSSSKKTEASKNNEDDVGEDDVGDDETPGGGKRKVHFG 134
Query: 121 AVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPFRSSTSSS 163
AV VM KQP LDRN SH SKQ T+ +P+E E+P R STSSS
Sbjct: 135 AVFVMEKQPTLDRNSSH---SKQSTSTSPREPEMPLRLSTSSS 174
BLAST of CcUC06G117800 vs. NCBI nr
Match:
KAG7026101.1 (hypothetical protein SDJN02_12600, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 179.9 bits (455), Expect = 1.8e-41
Identity = 101/167 (60.48%), Postives = 122/167 (73.05%), Query Frame = 0
Query: 1 MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLL 60
MEERKGDARI IISGL+FLC+++GGFLLCLYLF+PES++ DWY +VGI+LVSTPW+FW L
Sbjct: 1 MEERKGDARILIISGLMFLCVVAGGFLLCLYLFVPESESQDWYSVVGIILVSTPWMFWFL 60
Query: 61 VYLHHCLKPTKVQLNAFGSNNNSSNNKTEANNNNGGATTEANLGEVES-----PGGGKRR 120
VYL+HCLKP +VQ NA S+++SSN A N GG ANL +VES PG GKRR
Sbjct: 61 VYLYHCLKPIRVQSNAALSHSSSSNRPPSAANKGGGIV--ANLPQVESPDCDTPGDGKRR 120
Query: 121 VHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPFRSSTSSS 163
VHFGAVVV G +PQ + SH+S SK+ + NE S TSSS
Sbjct: 121 VHFGAVVVKGNKPQGGKKSSHDSGSKE-----LRSNESGATSPTSSS 160
BLAST of CcUC06G117800 vs. NCBI nr
Match:
XP_023000624.1 (uncharacterized protein LOC111494867 [Cucurbita maxima])
HSP 1 Score: 174.1 bits (440), Expect = 9.8e-40
Identity = 98/167 (58.68%), Postives = 120/167 (71.86%), Query Frame = 0
Query: 1 MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLL 60
MEERKGDA I IISGL+FLC+++GG LLCLYLF+PES++ DWY +VGI+LVSTPWIFW L
Sbjct: 1 MEERKGDATILIISGLMFLCVVAGGLLLCLYLFVPESESQDWYSVVGIILVSTPWIFWFL 60
Query: 61 VYLHHCLKPTKVQLNAFGSNNNSSNNKTEANNNNGGATTEANLGEVES-----PGGGKRR 120
VYL+HCLKP ++Q NA +++SSN A NN+GG ANL +VES PG GKRR
Sbjct: 61 VYLYHCLKPIRLQSNAALKHSSSSNRPPSAANNSGGIV--ANLPQVESPDCDTPGDGKRR 120
Query: 121 VHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPFRSSTSSS 163
VHFGAVVV G PQ + SH+S+SK+ + NE S T SS
Sbjct: 121 VHFGAVVVKGNNPQGGKKSSHDSSSKE-----LRSNESGATSPTLSS 160
BLAST of CcUC06G117800 vs. NCBI nr
Match:
KAG6593768.1 (hypothetical protein SDJN03_13244, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 151.4 bits (381), Expect = 6.8e-33
Identity = 86/151 (56.95%), Postives = 107/151 (70.86%), Query Frame = 0
Query: 17 IFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLVYLHHCLKPTKVQLNA 76
+FLC+++GGFLLCLYLF+PES++ DWY +VGI+LVSTPW+FW LVYL+HCLKP +VQ NA
Sbjct: 1 MFLCVVAGGFLLCLYLFVPESESQDWYSVVGIILVSTPWMFWFLVYLYHCLKPIRVQSNA 60
Query: 77 FGSNNNSSNNKTEANNNNGGATTEANLGEVES-----PGGGKRRVHFGAVVVMGKQPQLD 136
S+++SSN A N GG ANL +VES PG GKRRVHFGAVVV G +PQ
Sbjct: 61 TLSHSSSSNRPPSAANKGGGIV--ANLPQVESPDCDTPGDGKRRVHFGAVVVKGNKPQGG 120
Query: 137 RNFSHESNSKQPTTMAPKENEVPFRSSTSSS 163
+ SH+S SK+ + NE S TSSS
Sbjct: 121 KKSSHDSGSKE-----LRSNESGATSPTSSS 144
BLAST of CcUC06G117800 vs. ExPASy TrEMBL
Match:
A0A0A0LN77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120380 PE=4 SV=1)
HSP 1 Score: 221.5 bits (563), Expect = 2.6e-54
Identity = 119/163 (73.01%), Postives = 134/163 (82.21%), Query Frame = 0
Query: 1 MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLL 60
MEERKGDARI IISGLIFLCII GGFLLCLYLFLPESQT DWYP +GIVLVSTPWIFWL
Sbjct: 1 MEERKGDARIVIISGLIFLCIILGGFLLCLYLFLPESQTSDWYPTIGIVLVSTPWIFWLS 60
Query: 61 VYLHHCLKPTKVQLNAFGSNN-NSSNNKTEANNNNGGATTEANLGEVESPGGGKRRVHFG 120
VY++HCLKPTKV LN FGSN+ NSS+ KTEA+ NN E ++G+ E+PGGGKR+VHFG
Sbjct: 61 VYIYHCLKPTKVLLNPFGSNSINSSSKKTEASKNNEDDVGEDDVGDDETPGGGKRKVHFG 120
Query: 121 AVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPFRSSTSSS 163
AV VM KQP LDRN SH SKQ T+ +P+E E+P R STSSS
Sbjct: 121 AVFVMEKQPTLDRNSSH---SKQSTSTSPREPEMPLRLSTSSS 160
BLAST of CcUC06G117800 vs. ExPASy TrEMBL
Match:
A0A6J1KKI3 (uncharacterized protein LOC111494867 OS=Cucurbita maxima OX=3661 GN=LOC111494867 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 4.8e-40
Identity = 98/167 (58.68%), Postives = 120/167 (71.86%), Query Frame = 0
Query: 1 MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLL 60
MEERKGDA I IISGL+FLC+++GG LLCLYLF+PES++ DWY +VGI+LVSTPWIFW L
Sbjct: 1 MEERKGDATILIISGLMFLCVVAGGLLLCLYLFVPESESQDWYSVVGIILVSTPWIFWFL 60
Query: 61 VYLHHCLKPTKVQLNAFGSNNNSSNNKTEANNNNGGATTEANLGEVES-----PGGGKRR 120
VYL+HCLKP ++Q NA +++SSN A NN+GG ANL +VES PG GKRR
Sbjct: 61 VYLYHCLKPIRLQSNAALKHSSSSNRPPSAANNSGGIV--ANLPQVESPDCDTPGDGKRR 120
Query: 121 VHFGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPFRSSTSSS 163
VHFGAVVV G PQ + SH+S+SK+ + NE S T SS
Sbjct: 121 VHFGAVVVKGNNPQGGKKSSHDSSSKE-----LRSNESGATSPTLSS 160
BLAST of CcUC06G117800 vs. ExPASy TrEMBL
Match:
A0A6J1DSP4 (uncharacterized protein LOC111022806 OS=Momordica charantia OX=3673 GN=LOC111022806 PE=4 SV=1)
HSP 1 Score: 150.6 bits (379), Expect = 5.6e-33
Identity = 89/163 (54.60%), Postives = 112/163 (68.71%), Query Frame = 0
Query: 1 MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLL 60
MEERKGDARI IISG+IFLCIISGG LL LYL+LP+S++ DWYPIVGIVLV+TPWIFWLL
Sbjct: 5 MEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWLL 64
Query: 61 VYLHHCLKP-TKVQLNAFGSNNNSSNNKTEANNNNGGATTEANLGEVESPGGGKRRVHFG 120
VYL+HC KP + Q F + N+S+N A N +G A +SPGGGKRRVHFG
Sbjct: 65 VYLYHCFKPAAQPQPPRFNAFNSSTNRAPPAANPSG-----AESPNCDSPGGGKRRVHFG 124
Query: 121 AVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPFRSSTSSS 163
++ +D N + +N ++ P+E+E+P S SSS
Sbjct: 125 TT----REEGMDSNTNGGNNHEK----CPRESELPLSPSISSS 154
BLAST of CcUC06G117800 vs. ExPASy TrEMBL
Match:
A0A2I4FRW9 (uncharacterized protein LOC109001519 OS=Juglans regia OX=51240 GN=LOC109001519 PE=4 SV=1)
HSP 1 Score: 131.0 bits (328), Expect = 4.6e-27
Identity = 74/149 (49.66%), Postives = 97/149 (65.10%), Query Frame = 0
Query: 1 MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLL 60
MEERKGDAR++IIS + F CI++GG LL LY+F+P++ + WYPIVG++LV PW FWL
Sbjct: 1 MEERKGDARVYIISFMFFACIVTGGILLFLYIFVPQADSASWYPIVGMILVGIPWAFWLF 60
Query: 61 VYLHHCLKP-TKVQLNAFGSNNNSSNNKTEANNNNGGATTEANLGEVESP-----GGGKR 120
YL+ C+KP T QL S NSS+ T+ GGAT N +ESP GGG+R
Sbjct: 61 TYLYRCIKPSTDTQL----SKQNSSHRSTQP---VGGATNTDNSRSLESPLNSPCGGGQR 120
Query: 121 RVHFGAVVVMGKQPQLDRNFSHESNSKQP 144
RVHFGAVVV+G + N +H++ P
Sbjct: 121 RVHFGAVVVLGNED----NSAHDTGRDVP 138
BLAST of CcUC06G117800 vs. ExPASy TrEMBL
Match:
A0A6A1W806 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G013118 PE=4 SV=1)
HSP 1 Score: 123.6 bits (309), Expect = 7.4e-25
Identity = 76/175 (43.43%), Postives = 103/175 (58.86%), Query Frame = 0
Query: 1 MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLL 60
MEERKGDARI+IIS L F CI++GG LLCLY+FLP++Q+ WYP+ GI+LV PW FWL
Sbjct: 1 MEERKGDARIYIISFLFFACIVTGGVLLCLYVFLPQTQSASWYPVAGIILVGIPWAFWLF 60
Query: 61 VYLHHCLKPTKVQLNAFGSNNNSSNNKTEANNNNGGATTEANLGEVESP---GGGKRRVH 120
YL+ CLKP+ + SS+ T GATT N ESP +RRVH
Sbjct: 61 AYLYRCLKPSAGDPKP--NEYESSHGPTPPAAPASGATTTPNTSSAESPVQSSCAQRRVH 120
Query: 121 FGAVVVMGKQP----QLDRNFSHESNSKQP---------TTMAPKENEVPFRSST 160
FGAVVV+G + Q +R+ +++K+ ++ +E+E+P S T
Sbjct: 121 FGAVVVLGDEEGGGGQRERDVQELAHAKETRGVSDEAVMLSIESRESEMPILSLT 173
BLAST of CcUC06G117800 vs. TAIR 10
Match:
AT5G17590.1 (Putative membrane lipoprotein )
HSP 1 Score: 67.8 bits (164), Expect = 9.3e-12
Identity = 60/171 (35.09%), Postives = 84/171 (49.12%), Query Frame = 0
Query: 1 MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLL 60
M++RKGD RI+II+ L CI+ GG LL LYL S + G+V V PW+FW L
Sbjct: 1 MDQRKGDPRIYIITVLFLSCILIGGVLLGLYLV--RSDPNPLFLQAGMVFVGVPWLFWFL 60
Query: 61 VYLHHC-LKPTKV---QLNAFGSNNNSS--NNKTEANNNNGGATTEANLGEVESPGGGKR 120
Y++ C LKP + Q F S + +S K + N TT ++ SP G++
Sbjct: 61 AYVYSCVLKPCVIFVSQSTIFNSKSVTSFDPEKGDPNKAPETVTTTSDPAPRNSPREGEK 120
Query: 121 RVHFGAVVVMGKQ---PQLDRNFSHESNSKQPTTMAPKENEVPFRSSTSSS 163
V FG VVV+G + + D N S +N Q +E + S S S
Sbjct: 121 HVQFGNVVVLGDEEGGKEEDHNESSSNNLIQDHMRIEEEEDQENGRSNSKS 169
BLAST of CcUC06G117800 vs. TAIR 10
Match:
AT4G30770.1 (Putative membrane lipoprotein )
HSP 1 Score: 48.5 bits (114), Expect = 5.8e-06
Identity = 54/167 (32.34%), Postives = 72/167 (43.11%), Query Frame = 0
Query: 2 EERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLLV 61
+ R G A I +I+ +FL I GG L Y LP P W +GIV V PW FW+L
Sbjct: 5 DPRAGQAFICLITLFLFLSIAVGGGCLIAYTILP--YPPVWLSYLGIVFVCLPWFFWILT 64
Query: 62 YLHHCLKPTKVQLNAFGSNNNSSNNKTEANNNNGGATTEANLG----EVESPGGGKRR-- 121
+ + + T GS N NNN G T +L +ESP
Sbjct: 65 FAYRIVSRTFGFRMVVGSGGN--------NNNANGETMTRDLDPPEQSLESPDDDDPEPI 124
Query: 122 VH-FGAVVVMGKQPQLDRNFSHESNSKQPTTMAPKENEVPFRSSTSS 162
H G V+V + Q + S SNS T+A E+E+P S +S
Sbjct: 125 AHPQGQVLVSIEGNQSKKRMSTSSNS----TIASHESEMPLAISMAS 157
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038875814.1 | 1.0e-68 | 85.98 | uncharacterized protein LOC120068181 [Benincasa hispida] | [more] |
XP_004138999.1 | 5.4e-54 | 73.01 | uncharacterized protein LOC101203715 [Cucumis sativus] >KAE8651759.1 hypothetica... | [more] |
KAG7026101.1 | 1.8e-41 | 60.48 | hypothetical protein SDJN02_12600, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023000624.1 | 9.8e-40 | 58.68 | uncharacterized protein LOC111494867 [Cucurbita maxima] | [more] |
KAG6593768.1 | 6.8e-33 | 56.95 | hypothetical protein SDJN03_13244, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LN77 | 2.6e-54 | 73.01 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120380 PE=4 SV=1 | [more] |
A0A6J1KKI3 | 4.8e-40 | 58.68 | uncharacterized protein LOC111494867 OS=Cucurbita maxima OX=3661 GN=LOC111494867... | [more] |
A0A6J1DSP4 | 5.6e-33 | 54.60 | uncharacterized protein LOC111022806 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A2I4FRW9 | 4.6e-27 | 49.66 | uncharacterized protein LOC109001519 OS=Juglans regia OX=51240 GN=LOC109001519 P... | [more] |
A0A6A1W806 | 7.4e-25 | 43.43 | Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G013118 PE=4 SV=1 | [more] |