CcUC06G116070 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G116070
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Auxin-responsive protein
Location	CicolChr06: 7546479 .. 7547776 (-)
RNA-Seq Expression	CcUC06G116070
Synteny	CcUC06G116070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTTTTCTATATAACTACTCTCCCAATTACATCTCTCACCCAAAAAGACACACAAAATCCCTTTTTCTCTTCTTCTCCTTCCTCCTCCTTATCAAACCATTCAAAGAAAGAAAGAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAACAGAGGAAAATGGAATCCAAAGTTGCGTTTCAGAACGATCTGAATCTCGAAGCCACCGAACTTCGTCTTGGACTACCTGGAGTCGTTACTGAAAGAGATGATTCATCGGAGAATTCATCTGGGGTTAAACCTAATAACAAGAGGAATTTGCGCAATGATTCTGCTCCTCCCTCAAAGTAAGTGATGATTTCGTTAAAATCTTTTGTGTTTGTAATTTGATCTATGTCTTTTTGTTACTCAATTTGTGTTTTGTGATGTGGGTATTGTAGGGCTCAGGTTGTTGGGTGGCCACCGATTAGATCTTTTAGGAAAAATATTCTTCAGGTGAAGAAAACGGAGGCCACGACGGCGGCGGACGGCGGCGGAGGGATTTATGTGAAAGTGAGTATGGATGGTGCTCCTTATTTGAGGAAGATTGATTTGAGTCTCTATAAAGGCTACCCTGAACTTCTTAAAGCCTTGGAGGATATGTTCAAGTTTACCATCGGTAAGGAAAATTTTCAAAATACTTCAATCTTCAATGGGTTTTCTTTTGTTCTTTTTAATTGATGTTCGAAGGTAATAAAGTTTTGTTTAATTACAGGTCAATATTCTGAGAGGGAAGGTTATAAGGGATCTGATTTTGCTCCAACTTATGAAGATAAAGATGGTGATTGGATGCTTGTGGGTGATGTTCCATGGGAGTAAGTTCCTTCTAATATTCTTCAAAATTTTAAAGAATCTGTATATTGAATTTGTATGTATGTTTAAAGGAAATTCAAGATCTAACTTTTTGTGGTGTTTAATTTAAATGCAGAATGTTTATTTCATCTTGCAAGAGGATGAGAATCATGAAAGGATCAGAAGTTGGGGGACTCAGCTGTGGCGTATGAGAAAATTGCTTAGAAAAGAAAGAAGAAGAAGAAAAAGAAACAACTTCGATTTTCTCGAGAAAGAAAAAGAGAGCAGATGAACTGCAAATTTTCTGTTTGGTTTCTCGGAAAAGAGAATCTGATCCGTCGGGAAAGTTTCCGGTGACGGAAATCCGGACGGAGAAAAAGAACTCTCGCCAGAGTAAATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGTTTTGGATTTGTGTAACAAACTTAGGGGTTTTGTGGATGACATATTAAGATGA

mRNA sequence

TTCCTTTTCTATATAACTACTCTCCCAATTACATCTCTCACCCAAAAAGACACACAAAATCCCTTTTTCTCTTCTTCTCCTTCCTCCTCCTTATCAAACCATTCAAAGAAAGAAAGAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAACAGAGGAAAATGGAATCCAAAGTTGCGTTTCAGAACGATCTGAATCTCGAAGCCACCGAACTTCGTCTTGGACTACCTGGAGTCGTTACTGAAAGAGATGATTCATCGGAGAATTCATCTGGGGTTAAACCTAATAACAAGAGGAATTTGCGCAATGATTCTGCTCCTCCCTCAAAGGCTCAGGTTGTTGGGTGGCCACCGATTAGATCTTTTAGGAAAAATATTCTTCAGGTGAAGAAAACGGAGGCCACGACGGCGGCGGACGGCGGCGGAGGGATTTATGTGAAAGTGAGTATGGATGGTGCTCCTTATTTGAGGAAGATTGATTTGAGTCTCTATAAAGGCTACCCTGAACTTCTTAAAGCCTTGGAGGATATGTTCAAGTTTACCATCGGTCAATATTCTGAGAGGGAAGGTTATAAGGGATCTGATTTTGCTCCAACTTATGAAGATAAAGATGGTGATTGGATGCTTGTGGGTGATGTTCCATGGGAAATGTTTATTTCATCTTGCAAGAGGATGAGAATCATGAAAGGATCAGAAGTTGGGGGACTCAGCTGTGGCAAAAAGAGAGCAGATGAACTGCAAATTTTCTGTTTGGTTTCTCGGAAAAGAGAATCTGATCCGTCGGGAAAGTTTCCGGTGACGGAAATCCGGACGGAGAAAAAGAACTCTCGCCAGATTTTGGATTTGTGTAACAAACTTAGGGGTTTTGTGGATGACATATTAAGATGA

Coding sequence (CDS)

ATGGAATCCAAAGTTGCGTTTCAGAACGATCTGAATCTCGAAGCCACCGAACTTCGTCTTGGACTACCTGGAGTCGTTACTGAAAGAGATGATTCATCGGAGAATTCATCTGGGGTTAAACCTAATAACAAGAGGAATTTGCGCAATGATTCTGCTCCTCCCTCAAAGGCTCAGGTTGTTGGGTGGCCACCGATTAGATCTTTTAGGAAAAATATTCTTCAGGTGAAGAAAACGGAGGCCACGACGGCGGCGGACGGCGGCGGAGGGATTTATGTGAAAGTGAGTATGGATGGTGCTCCTTATTTGAGGAAGATTGATTTGAGTCTCTATAAAGGCTACCCTGAACTTCTTAAAGCCTTGGAGGATATGTTCAAGTTTACCATCGGTCAATATTCTGAGAGGGAAGGTTATAAGGGATCTGATTTTGCTCCAACTTATGAAGATAAAGATGGTGATTGGATGCTTGTGGGTGATGTTCCATGGGAAATGTTTATTTCATCTTGCAAGAGGATGAGAATCATGAAAGGATCAGAAGTTGGGGGACTCAGCTGTGGCAAAAAGAGAGCAGATGAACTGCAAATTTTCTGTTTGGTTTCTCGGAAAAGAGAATCTGATCCGTCGGGAAAGTTTCCGGTGACGGAAATCCGGACGGAGAAAAAGAACTCTCGCCAGATTTTGGATTTGTGTAACAAACTTAGGGGTTTTGTGGATGACATATTAAGATGA

Protein sequence

MESKVAFQNDLNLEATELRLGLPGVVTERDDSSENSSGVKPNNKRNLRNDSAPPSKAQVVGWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKALEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKGSEVGGLSCGKKRADELQIFCLVSRKRESDPSGKFPVTEIRTEKKNSRQILDLCNKLRGFVDDILR

Homology

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BLAST of CcUC06G116070 vs. NCBI nr
Match: XP_038875234.1 (auxin-induced protein 22B-like [Benincasa hispida])

HSP 1 Score: 350.5 bits (898), Expect = 1.1e-92
Identity = 172/186 (92.47%), Postives = 176/186 (94.62%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGVVTERDDSSENSSGV-KPNNKRNLRNDSAPPSKAQV 60
           MESKVAFQNDLNLEATELRLGLPG+VTERDD +ENSSGV KPNNKRN   DSAPP KAQV
Sbjct: 1   MESKVAFQNDLNLEATELRLGLPGIVTERDDPAENSSGVIKPNNKRNFHKDSAPPPKAQV 60

Query: 61  VGWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKA 120
           VGWPPIRSFRKN LQVKKTEAT AA  GGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKA
Sbjct: 61  VGWPPIRSFRKNTLQVKKTEATMAAADGGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKA 120

Query: 121 LEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKGSEV 180
           LEDMFKFTIGQYSEREGYKGS+FAPTYEDKDGDWMLVGDVPW+MFISSCKRMRIMKGSEV
Sbjct: 121 LEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEV 180

Query: 181 GGLSCG 186
           GGLSCG
Sbjct: 181 GGLSCG 186

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BLAST of CcUC06G116070 vs. NCBI nr
Match: XP_004150434.1 (auxin-induced protein 22B [Cucumis sativus] >KGN61645.1 hypothetical protein Csa_006659 [Cucumis sativus])

HSP 1 Score: 347.8 bits (891), Expect = 7.4e-92
Identity = 168/185 (90.81%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGVVTERDDSSENSSGVKPNNKRNLRNDSAPPSKAQVV 60
           MES V F NDLNLEATELRLGLPG+V+ERDDSS  SS VKPNNKRN +NDSAPP KAQVV
Sbjct: 1   MESNVTFHNDLNLEATELRLGLPGIVSERDDSSATSSAVKPNNKRNFQNDSAPPPKAQVV 60

Query: 61  GWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPPIRSFRKN LQVKKTEATT A  GGGIYVKVSMDGAPYLRKIDLS+YKGYPELLKAL
Sbjct: 61  GWPPIRSFRKNTLQVKKTEATTTAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPELLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKGSEVG 180
           EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPW+MFISSCKRMRIMKGSEVG
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEVG 180

Query: 181 GLSCG 186
           GLSCG
Sbjct: 181 GLSCG 185

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BLAST of CcUC06G116070 vs. NCBI nr
Match: XP_008449289.1 (PREDICTED: auxin-induced protein 22B [Cucumis melo] >KAA0057481.1 auxin-induced protein 22B [Cucumis melo var. makuwa] >TYK30177.1 auxin-induced protein 22B [Cucumis melo var. makuwa])

HSP 1 Score: 347.4 bits (890), Expect = 9.7e-92
Identity = 169/185 (91.35%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGVVTERDDSSENSSGVKPNNKRNLRNDSAPPSKAQVV 60
           MES V F NDLNLEATELRLGLPGVV+ERDDSS  SS VKPNNKRN +NDSAPP KAQVV
Sbjct: 1   MESNVTFHNDLNLEATELRLGLPGVVSERDDSSAASSAVKPNNKRNFQNDSAPPPKAQVV 60

Query: 61  GWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPPIRSFRKN LQVKKTEATTAA  GGGIYVKVSMDGAPYLRKIDLS+YKGYPE LKAL
Sbjct: 61  GWPPIRSFRKNTLQVKKTEATTAAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPEFLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKGSEVG 180
           EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPW+MFISSCKRMRIMKGSEVG
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEVG 180

Query: 181 GLSCG 186
           GLSCG
Sbjct: 181 GLSCG 185

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BLAST of CcUC06G116070 vs. NCBI nr
Match: XP_023547374.1 (auxin-induced protein 22B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.5 bits (815), Expect = 4.8e-83
Identity = 153/178 (85.96%), Postives = 162/178 (91.01%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGVVTERDDSSENSSGVKPNNKRNLRNDSAPPSKAQVV 60
           MESK AFQ DLNLEATELRLGLPG+ TE DDS ENSSG+K NNKRNL+NDSAPP KAQVV
Sbjct: 1   MESKPAFQTDLNLEATELRLGLPGIATETDDSPENSSGLKTNNKRNLQNDSAPPPKAQVV 60

Query: 61  GWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPP+RSFRKN LQ+KK    TAAD GGG +VKVSMDGAPYLRKIDL LYKGYPELLKAL
Sbjct: 61  GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKGSE 179
           EDMFKFTIGQYSEREGYKGSDF+ TYEDKDGDWMLVGDVPW+MFISSCKRMRIMKGS+
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSD 178

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BLAST of CcUC06G116070 vs. NCBI nr
Match: XP_022959055.1 (auxin-induced protein 22B-like [Cucurbita moschata])

HSP 1 Score: 313.9 bits (803), Expect = 1.2e-81
Identity = 150/178 (84.27%), Postives = 162/178 (91.01%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGVVTERDDSSENSSGVKPNNKRNLRNDSAPPSKAQVV 60
           MESK AFQ+DLNLEATELRLGLPG+ TE DD+ ENS G+K NNKRNL+NDSAPP KAQVV
Sbjct: 114 MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPGLKTNNKRNLQNDSAPPPKAQVV 173

Query: 61  GWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPP+RSFRKN LQ+KK    TAAD GGG +VKVSMDGAPYLRKIDL LY+GYPELLKAL
Sbjct: 174 GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYEGYPELLKAL 233

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKGSE 179
           EDMFKFTIGQYSEREGYKGSDF+ TYEDKDGDWMLVGDVPW+MFISSCKRMRIMKGS+
Sbjct: 234 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSD 291

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BLAST of CcUC06G116070 vs. ExPASy Swiss-Prot
Match: P32294 (Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.0e-64
Identity = 124/204 (60.78%), Postives = 149/204 (73.04%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGVVTERDDSSENSSGVKPNNKRNLRND---------- 60
           MES+V F++DLNL+ATELRLGLPG   E++D++  +  V  NNKR +R            
Sbjct: 1   MESRVVFESDLNLKATELRLGLPG-TEEKEDNNLRTHAVLRNNKRQVRETSQDSVSISKA 60

Query: 61  ----------SAPPSKAQVVGWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAP 120
                     SAPP KA++VGWPPIRS+RKN +Q  +         G GI+VKVSMDGAP
Sbjct: 61  SHHQQHVETVSAPPPKAKIVGWPPIRSYRKNSVQEGE---------GDGIFVKVSMDGAP 120

Query: 121 YLRKIDLSLYKGYPELLKALEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVP 180
           YLRK+DL +Y GYPELLKALE MFK  IG+YSEREGYKGS++APTYEDKDGDWMLVGDVP
Sbjct: 121 YLRKVDLKVYGGYPELLKALETMFKLAIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVP 180

Query: 181 WEMFISSCKRMRIMKGSEVGGLSC 185
           W+MF++SCKR+RIMKGSE  GL C
Sbjct: 181 WDMFVTSCKRLRIMKGSEARGLGC 194

[Close]

BLAST of CcUC06G116070 vs. ExPASy Swiss-Prot
Match: P33077 (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2)

HSP 1 Score: 238.8 bits (608), Expect = 6.3e-62
Identity = 116/189 (61.38%), Postives = 142/189 (75.13%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGVVTERDDSSENSSGVKPNNKRNL----RNDSAPPSK 60
           ME    +   +NL+ATELRLGLPG          N   +    ++ +    + ++A P K
Sbjct: 1   MEKVDVYDELVNLKATELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPK 60

Query: 61  AQVVGWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPEL 120
           AQ+VGWPP+RS+RKN +Q KK+E+      G G YVKVSMDGAPYLRKIDL++YK YPEL
Sbjct: 61  AQIVGWPPVRSYRKNNVQTKKSESE-----GQGNYVKVSMDGAPYLRKIDLTMYKQYPEL 120

Query: 121 LKALEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKG 180
           +K+LE+MFKF++G+Y EREGYKGSDF PTYEDKDGDWMLVGDVPWEMF+SSCKR+RIMKG
Sbjct: 121 MKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKG 180

Query: 181 SEVGGLSCG 186
           SEV GL CG
Sbjct: 181 SEVKGLGCG 184

[Close]

BLAST of CcUC06G116070 vs. ExPASy Swiss-Prot
Match: Q38822 (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 7.0e-61
Identity = 120/188 (63.83%), Postives = 138/188 (73.40%), Query Frame = 0


Query: 11  LNLEATELRLGLPGVVTERDDSSENSSGVKPNNKRNLRND-------------SAPPSKA 70
           +NL+ TELRLGLPG      ++ E  S    NNKR L  D             ++PP KA
Sbjct: 5   VNLKETELRLGLPG-TDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKA 64

Query: 71  QVVGWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPELL 130
           Q+VGWPP+RS+RKN +Q KK E   +   G GIYVKVSMDGAPYLRKIDLS YKGY ELL
Sbjct: 65  QIVGWPPVRSYRKNNIQSKKNE---SEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELL 124

Query: 131 KALEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKGS 186
           KALE MFKF++G+Y ER+GYKGSDF PTYEDKDGDWML+GDVPWEMFI +CKR+RIMKGS
Sbjct: 125 KALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGS 184

[Close]

BLAST of CcUC06G116070 vs. ExPASy Swiss-Prot
Match: O24542 (Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.9e-59
Identity = 116/190 (61.05%), Postives = 141/190 (74.21%), Query Frame = 0


Query: 6   AFQNDLNLEATELRLGLPGVVTERDDSSENS---SGVKPNNKRNLRNDS--------APP 65
           +++ +LNL+ATELRLGLPG       ++  S   S  + +++ ++ N S         PP
Sbjct: 7   SYEKELNLKATELRLGLPGSDEPEKRATARSNKRSSPEASDEESISNGSDVTKEDNVVPP 66

Query: 66  SKAQVVGWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYP 125
           +KAQVVGWPPIRS+RKN +Q KK E +     G G+YVKVSM GAPYLRKIDL +YK YP
Sbjct: 67  AKAQVVGWPPIRSYRKNNVQQKKEEESE----GNGMYVKVSMAGAPYLRKIDLKVYKSYP 126

Query: 126 ELLKALEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIM 185
           ELLKALE+MFK   G+YSEREGY GS++APTYEDKDGDWMLVGDVPW MF+SSCKR+RIM
Sbjct: 127 ELLKALENMFKCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIM 186

[Close]

BLAST of CcUC06G116070 vs. ExPASy Swiss-Prot
Match: P49679 (Auxin-induced protein IAA4 OS=Pisum sativum OX=3888 GN=IAA4/5 PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 8.6e-59
Identity = 119/197 (60.41%), Postives = 139/197 (70.56%), Query Frame = 0


Query: 11  LNLEATELRLGLPGVVTERDDS-SENSSGVKPNNKRNL---------------------R 70
           +  +ATELRLGLPG+  E +      SS VK NNKR L                      
Sbjct: 1   MEFKATELRLGLPGITEEEEKKIIHGSSVVKNNNKRQLPQTSEESVSISKVTNDEHIVES 60

Query: 71  NDSAPPSKAQVVGWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLS 130
           + +APP+KA++VGWPPIRS+RKN L     EA       GGI+VKVSMDGAPYLRKIDL 
Sbjct: 61  SSAAPPAKAKIVGWPPIRSYRKNSLH----EADV-----GGIFVKVSMDGAPYLRKIDLR 120

Query: 131 LYKGYPELLKALEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSC 186
           +Y GY ELLKALE MFK TIG+YSEREGYKGS++APTYEDKDGDWMLVGDVPW+MF++SC
Sbjct: 121 VYGGYSELLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSC 180

[Close]

BLAST of CcUC06G116070 vs. ExPASy TrEMBL
Match: A0A0A0LIA8 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G200440 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.6e-92
Identity = 168/185 (90.81%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGVVTERDDSSENSSGVKPNNKRNLRNDSAPPSKAQVV 60
           MES V F NDLNLEATELRLGLPG+V+ERDDSS  SS VKPNNKRN +NDSAPP KAQVV
Sbjct: 1   MESNVTFHNDLNLEATELRLGLPGIVSERDDSSATSSAVKPNNKRNFQNDSAPPPKAQVV 60

Query: 61  GWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPPIRSFRKN LQVKKTEATT A  GGGIYVKVSMDGAPYLRKIDLS+YKGYPELLKAL
Sbjct: 61  GWPPIRSFRKNTLQVKKTEATTTAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPELLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKGSEVG 180
           EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPW+MFISSCKRMRIMKGSEVG
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEVG 180

Query: 181 GLSCG 186
           GLSCG
Sbjct: 181 GLSCG 185

[Close]

BLAST of CcUC06G116070 vs. ExPASy TrEMBL
Match: A0A5A7UVE4 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001650 PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.7e-92
Identity = 169/185 (91.35%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGVVTERDDSSENSSGVKPNNKRNLRNDSAPPSKAQVV 60
           MES V F NDLNLEATELRLGLPGVV+ERDDSS  SS VKPNNKRN +NDSAPP KAQVV
Sbjct: 1   MESNVTFHNDLNLEATELRLGLPGVVSERDDSSAASSAVKPNNKRNFQNDSAPPPKAQVV 60

Query: 61  GWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPPIRSFRKN LQVKKTEATTAA  GGGIYVKVSMDGAPYLRKIDLS+YKGYPE LKAL
Sbjct: 61  GWPPIRSFRKNTLQVKKTEATTAAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPEFLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKGSEVG 180
           EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPW+MFISSCKRMRIMKGSEVG
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEVG 180

Query: 181 GLSCG 186
           GLSCG
Sbjct: 181 GLSCG 185

[Close]

BLAST of CcUC06G116070 vs. ExPASy TrEMBL
Match: A0A1S3BMB6 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103491213 PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.7e-92
Identity = 169/185 (91.35%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGVVTERDDSSENSSGVKPNNKRNLRNDSAPPSKAQVV 60
           MES V F NDLNLEATELRLGLPGVV+ERDDSS  SS VKPNNKRN +NDSAPP KAQVV
Sbjct: 1   MESNVTFHNDLNLEATELRLGLPGVVSERDDSSAASSAVKPNNKRNFQNDSAPPPKAQVV 60

Query: 61  GWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPPIRSFRKN LQVKKTEATTAA  GGGIYVKVSMDGAPYLRKIDLS+YKGYPE LKAL
Sbjct: 61  GWPPIRSFRKNTLQVKKTEATTAAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPEFLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKGSEVG 180
           EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPW+MFISSCKRMRIMKGSEVG
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEVG 180

Query: 181 GLSCG 186
           GLSCG
Sbjct: 181 GLSCG 185

[Close]

BLAST of CcUC06G116070 vs. ExPASy TrEMBL
Match: A0A6J1H578 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111460160 PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.7e-82
Identity = 150/178 (84.27%), Postives = 162/178 (91.01%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGVVTERDDSSENSSGVKPNNKRNLRNDSAPPSKAQVV 60
           MESK AFQ+DLNLEATELRLGLPG+ TE DD+ ENS G+K NNKRNL+NDSAPP KAQVV
Sbjct: 114 MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPGLKTNNKRNLQNDSAPPPKAQVV 173

Query: 61  GWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPP+RSFRKN LQ+KK    TAAD GGG +VKVSMDGAPYLRKIDL LY+GYPELLKAL
Sbjct: 174 GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYEGYPELLKAL 233

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKGSE 179
           EDMFKFTIGQYSEREGYKGSDF+ TYEDKDGDWMLVGDVPW+MFISSCKRMRIMKGS+
Sbjct: 234 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSD 291

[Close]

BLAST of CcUC06G116070 vs. ExPASy TrEMBL
Match: A0A6J1CCX2 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111009592 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.4e-80
Identity = 151/186 (81.18%), Postives = 166/186 (89.25%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPG-VVTERDDSSENSSGVKPNNKRNLRNDSAPPSKAQV 60
           ME+K+ F++ LNLEATELRLGLPG +  ER DS ENSSGV+  NKRN +NDSAPP KAQV
Sbjct: 35  MEAKIGFESGLNLEATELRLGLPGSIADERRDSGENSSGVR-TNKRNFQNDSAPPPKAQV 94

Query: 61  VGWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKA 120
           VGWPPIRSFRKN LQ KKTEA   A+GGG  +VKVSMDGAPYLRKIDL +YKGYPELLKA
Sbjct: 95  VGWPPIRSFRKNTLQAKKTEAAATAEGGGS-FVKVSMDGAPYLRKIDLGVYKGYPELLKA 154

Query: 121 LEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKGSEV 180
           LEDMFKFTIGQYSEREGYKGS+FAPTYEDKDGDWMLVGDVPW+MFI SCKR+RIM+GS+V
Sbjct: 155 LEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLVGDVPWQMFILSCKRLRIMRGSDV 214

Query: 181 GGLSCG 186
           GGLSCG
Sbjct: 215 GGLSCG 218

[Close]

BLAST of CcUC06G116070 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 238.8 bits (608), Expect = 4.5e-63
Identity = 116/189 (61.38%), Postives = 142/189 (75.13%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGVVTERDDSSENSSGVKPNNKRNL----RNDSAPPSK 60
           ME    +   +NL+ATELRLGLPG          N   +    ++ +    + ++A P K
Sbjct: 1   MEKVDVYDELVNLKATELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPK 60

Query: 61  AQVVGWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPEL 120
           AQ+VGWPP+RS+RKN +Q KK+E+      G G YVKVSMDGAPYLRKIDL++YK YPEL
Sbjct: 61  AQIVGWPPVRSYRKNNVQTKKSESE-----GQGNYVKVSMDGAPYLRKIDLTMYKQYPEL 120

Query: 121 LKALEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKG 180
           +K+LE+MFKF++G+Y EREGYKGSDF PTYEDKDGDWMLVGDVPWEMF+SSCKR+RIMKG
Sbjct: 121 MKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKG 180

Query: 181 SEVGGLSCG 186
           SEV GL CG
Sbjct: 181 SEVKGLGCG 184

[Close]

BLAST of CcUC06G116070 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 235.3 bits (599), Expect = 5.0e-62
Identity = 120/188 (63.83%), Postives = 138/188 (73.40%), Query Frame = 0


Query: 11  LNLEATELRLGLPGVVTERDDSSENSSGVKPNNKRNLRND-------------SAPPSKA 70
           +NL+ TELRLGLPG      ++ E  S    NNKR L  D             ++PP KA
Sbjct: 5   VNLKETELRLGLPG-TDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKA 64

Query: 71  QVVGWPPIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPELL 130
           Q+VGWPP+RS+RKN +Q KK E   +   G GIYVKVSMDGAPYLRKIDLS YKGY ELL
Sbjct: 65  QIVGWPPVRSYRKNNIQSKKNE---SEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELL 124

Query: 131 KALEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKGS 186
           KALE MFKF++G+Y ER+GYKGSDF PTYEDKDGDWML+GDVPWEMFI +CKR+RIMKGS
Sbjct: 125 KALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGS 184

[Close]

BLAST of CcUC06G116070 vs. TAIR 10
Match: AT4G14560.1 (indole-3-acetic acid inducible )

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-55
Identity = 111/175 (63.43%), Postives = 128/175 (73.14%), Query Frame = 0


Query: 9   NDLNLEATELRLGLPGVVTERDDSSENSSGVKPNNKRNLRNDSA-----PPSKAQVVGWP 68
           N LNL+ TELRLGLPG    +++     S V+ NNKR   NDS      PP+K Q+VGWP
Sbjct: 5   NGLNLKDTELRLGLPGA---QEEQQLELSCVRSNNKRK-NNDSTEESAPPPAKTQIVGWP 64

Query: 69  PIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKALEDM 128
           P+RS RKN             +     YVKVSMDGAPYLRKIDL +YK YPELLKALE+M
Sbjct: 65  PVRSNRKN------------NNNKNVSYVKVSMDGAPYLRKIDLKMYKNYPELLKALENM 124

Query: 129 FKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKGSE 179
           FKFT+G+YSEREGYKGS F PTYEDKDGDWMLVGDVPW+MF SSC+++RIMKGSE
Sbjct: 125 FKFTVGEYSEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSE 163

[Close]

BLAST of CcUC06G116070 vs. TAIR 10
Match: AT3G23030.1 (indole-3-acetic acid inducible 2 )

HSP 1 Score: 212.6 bits (540), Expect = 3.5e-55
Identity = 112/179 (62.57%), Postives = 125/179 (69.83%), Query Frame = 0


Query: 9   NDLNLEATELRLGLPGVVTERDDSSENSSGVKPNNKRNL-----RNDSAPPSKAQVVGWP 68
           N+LNL+ TEL LGLPG  TE+    +  S VK NNKR         +S PP+K Q+VGWP
Sbjct: 7   NELNLKDTELCLGLPG-RTEKIKEEQEVSCVKSNNKRLFEETRDEEESTPPTKTQIVGWP 66

Query: 69  PIRSFRKNILQVKKTEATTAADGGGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKALEDM 128
           P+RS RKN   V               YVKVSMDGAPYLRKIDL  YK YPELLKALE+M
Sbjct: 67  PVRSSRKNNNSVS--------------YVKVSMDGAPYLRKIDLKTYKNYPELLKALENM 126

Query: 129 FKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWEMFISSCKRMRIMKGSEVGGL 183
           FK  IG+Y EREGYKGS F PTYEDKDGDWMLVGDVPW+MF SSCKR+RIMKGS+   L
Sbjct: 127 FKVMIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170

[Close]

BLAST of CcUC06G116070 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 177.9 bits (450), Expect = 9.4e-45
Identity = 109/225 (48.44%), Postives = 128/225 (56.89%), Query Frame = 0


Query: 11  LNLEATELRLGLPGVVTERDDSSEN-----------------SSGVKPNNKRNLRNDS-- 70
           +N EATELRLGLPG     + + +N                 S+ +   +K +L N    
Sbjct: 2   INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKEK 61

Query: 71  --APPSKAQVVGWPPIRSFRKNILQVKK------TEATTAADGGGG-----------IYV 130
              PP+KAQVVGWPP+RSFRKN++  +K      TE      G  G            YV
Sbjct: 62  VVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYV 121

Query: 131 KVSMDGAPYLRKIDLSLYKGYPELLKALEDMF-KFTIGQYSEREGYK------------- 184
           KVSMDGAPYLRKIDL LYK Y +L  AL  MF  FTIG Y   +G K             
Sbjct: 122 KVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGP-QGMKDFMNESKLIDLLN 181

The following BLAST results are available for this feature:

BLAST of CcUC06G116070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875234.1	1.1e-92	92.47	auxin-induced protein 22B-like [Benincasa hispida]	[more]
XP_004150434.1	7.4e-92	90.81	auxin-induced protein 22B [Cucumis sativus] >KGN61645.1 hypothetical protein Csa...	[more]
XP_008449289.1	9.7e-92	91.35	PREDICTED: auxin-induced protein 22B [Cucumis melo] >KAA0057481.1 auxin-induced ...	[more]
XP_023547374.1	4.8e-83	85.96	auxin-induced protein 22B-like [Cucurbita pepo subsp. pepo]	[more]
XP_022959055.1	1.2e-81	84.27	auxin-induced protein 22B-like [Cucurbita moschata]	[more]

BLAST of CcUC06G116070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32294	4.0e-64	60.78	Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 S...	[more]
P33077	6.3e-62	61.38	Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2	[more]
Q38822	7.0e-61	63.83	Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1	[more]
O24542	2.9e-59	61.05	Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 S...	[more]
P49679	8.6e-59	60.41	Auxin-induced protein IAA4 OS=Pisum sativum OX=3888 GN=IAA4/5 PE=1 SV=1	[more]

BLAST of CcUC06G116070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIA8	3.6e-92	90.81	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G200440 PE=3 SV=1	[more]
A0A5A7UVE4	4.7e-92	91.35	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BMB6	4.7e-92	91.35	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103491213 PE=3 SV=1	[more]
A0A6J1H578	5.7e-82	84.27	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111460160 PE=3 SV=1	[more]
A0A6J1CCX2	1.4e-80	81.18	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111009592 PE=3 SV=...	[more]

BLAST of CcUC06G116070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43700.1	4.5e-63	61.38	AUX/IAA transcriptional regulator family protein	[more]
AT1G04240.1	5.0e-62	63.83	AUX/IAA transcriptional regulator family protein	[more]
AT4G14560.1	1.6e-55	63.43	indole-3-acetic acid inducible	[more]
AT3G23030.1	3.5e-55	62.57	indole-3-acetic acid inducible 2	[more]
AT3G04730.1	9.4e-45	48.44	indoleacetic acid-induced protein 16	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 40..183 e-value: 1.0E-58 score: 199.1
None	No IPR available	GENE3D	3.10.20.90		coord: 85..188 e-value: 3.0E-44 score: 151.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..60
None	No IPR available	PANTHER	PTHR31734:SF167	AUXIN-RESPONSIVE PROTEIN	coord: 4..184
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 84..175
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 4..184
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 89..176 score: 27.584053

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G116070.1	CcUC06G116070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding