CcUC06G113550 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G113550
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pentatricopeptide repeat-containing protein
Location	CicolChr06: 4643762 .. 4647394 (+)
RNA-Seq Expression	CcUC06G113550
Synteny	CcUC06G113550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAACGGTGGAGCAATCTTTCAGAGAAATCAAGATCTTAGTTGATCGTATTGCTGCTGTCGACGTCACTATCAACGATGAGGAGACCTTCTTGCACATCTTTAATGGCTTACAGGCCGAGTTCAACACGTTTTGGACTTCCATTCGAACTCGAGACACAACATTAGTGCTCGCAGAACTGGAAGTTGTCCTCGACGCAGAAGCTAAGGCGATCATTGTTCACCAATCGGCATCAGAACCGGTACCCACGACCATGACCGCTTTCTAGCATCTGTAGACGAGAATCATGGTGGTCAAAATTCACAGAACAGGGGCGACAGGCGTTTGGTTCGTGGGAGAGGAAGGAATAATAATTGTAGGGTTTCTTTTAAATCCTGACAATCAATCCCAGCTTAGCCACTGATTACAATGGCGACGAAACAGTGAGCTTGTAATGGCCAATCCCTTACTATCACTCACAATGGGAGCGGTATTCTCTCCACCCCATCTCATTTCTTTACTTTATCTAAAATTCATTGGTCCTCTTAATTATCTGCCAATCTTTTATCTATTAAAAAATTTTGGAAAATCTGTACCGATGACCCATATTTAGCGCCACTCGAAATCTGACCTCGCTTTCAAAGAAACTCAAAATTTGGCCTTTTGCTGTTCTTCCTTCTTTCTTCTACTTTTTTTTTTTTTTTTCAGCTTTTTTTCTTTTTTCGTTTGCAATGTCTTCTCCAAGTCTCAGAAGCTAATGGCAAATCTTCTGCTATGCGCTCTCTGTGTGTCTATCCTGAGTCCATCAATCTGTCCGACCTCCTTCAGGGCCGCATTAACAATTCCCATCTTCGTCAAATCCACGCCCGAGTCTTTCGTCTGCTGAAGCATCAAGACAATCTAATTGCAACTCGACTTATTGGCCACTACCCACATTCTGTTGGACTCAGAGTTTTCAATCAACTCATTCGCCCCAACATATTTCCTTGCAATGCCATTATCAGAGTACTTGCTGAACACAACTCTTCCTTCCTTGCCTTTTCCATCTTCAAATCTTTGAAGCACTTTTCACTTTCCCCTAATGACTTCACTTTTTCTTTCCTTCTCAAAGCGTTTCACCGTTCCAGCCATGCTCTAAATTTGAAACAAGTTCATACCCATGTCCTTAAAATGGGTTATTTGGGTGATTCTTTTATCTCCAATGCGCTTCTTGCAGTCTACGCGAGAGGCTTGAAGGATATGGCTTCTGCACATAAGGTGTTCGATGAAATGTCGGATAGAGATATGGCTTGTTGTTGGACTTCTTTGATTGCTGGCTATGCCCAGATGGGTCTTGCTGAAAAGGCTCTGCTGCTTTTTGTGATGATGATCAAAGAGAATATGCAGCCGGAGGACGACACCATGGTCAGTGTTCTGTCTGCTTGTTCCAAGTTTCATATTGCTGAGATTGAGAAATGGGTTGTAGAATTAAGACAACTGGTTAATAAATTTGATTCCAAGAGCTCTTGTTGTGATTCAATCAATATTGTTCTTATTTATCTATATGGGAAGTGGGGGATGATTGAGAAGAGTGAAGAAAAGTTTAATGAAATTGTTGATAAGAGAAGTGTGCTTGTTTGGAATTCAATGATAAATGCATATTTTCAGAATGGTTTCCCTGTTGAAGCCTTGGCCCTTTTCCGTCTAATGGTTGAAAATTCCCATTGCAAACCTAACCATGTTACAATGGTTACTGTCCTTTCAGCTTGTGCTCAAATAGGAGATTTGCAGCTCGGTTGTTGGGTTCATGAAGTTCTCGAATGTGGTGGCCGTAGAGGTATCATTGCATCAAACAAAATGTTAGCCACTGCATTGATTGATATGTATTGTAAAAGTGGTAGCTTGGAGAGGGCAAAAGAAGTTTTTCATCAACTAATCAACAAAGATGTAATCTCCTTCAATGCCATGATCATGGGCCTTGCAGTTAACGGCAAAGGCGATGAGGCATTGAAGCTTTTTTCCCAAATGCAAGAGGTTGATATAAGGCCAACGACCGGAACATTTATTGGTTTATTATCTGCTTGTAGCCATTCGGGTTTTCTAGAACAAGGGCGTCAAATTTTTATTGAAATGACTACCCGCTATTTAGTATTGCCTAGTTTAGAACACTATGCTTGTTACATTGATCTCCTTGCTCGGGCAGGCCACTTCGAAGATGCTCTTGAAGTTGTTTCAACCATGCCTTTTGAACCTAATAATTTTGTTTGGAGTTCTCTGCTGAGAGGCTGCCTACTCCATTCAAAATTTGAGTTGGCACAATATGTTTCCAAAAAGCTTGTTGAAGTGGATCCTGAAAACTCTGCTGGCTATGTAATGCAGGCTAATTCATTTGCTACAGATCTTCAATGGGATGATGTCTCGGCTCTGAGATGGTTTATGAGAGAAAAGGGTATCCGTAAGCAGCCAGGCCAGAGTTGGATCAGTATAGATGGAATTGTACATGAATTTTTCTCGGCAACCAAATCACATCCTTATGTTGATCTATTATACAACACGTTGAATGTGCTTGAAAAACAAATGAAGCTAGTAATCCCATAGAAAAAACCTTACAAGGTTTAGAATGCGTTTGGCTAAGATATAATACATTTGTCTTAAAAATCAGATGTTCAAATCCCACCTTGCATTGTTAAACATAAAAAGAAGGGAGATGTTTGCATAAATATCACAATATAAATATGTACTTGTGAATGATTGACTGTGCTGGTGGTATTCAGTCATAGCAAGGGTATAGGCGAAGTTTCATTTGGTAATATTTTCTACTATTGATATGAATCACCATGTCAATTATGATGGCCACTTTACGTTCCTAGGCTTCAATCTTGCCTAATCATGTGGTTGTGTGGGTGTAACTCTACCTTACACACTGGTAAGGAGTATTGATCTCTTCCCAACTTTCTGAATGTGATGTACTTTTATTGGTATATTTTTATTGCATTTCATAAGTTAGTGTGCCCCACTAAACTTTTCTAGCCATAAAAAATGCATCAGTTCATACACTACTATTATGTTTTAGATTTAGTTTTCTTAAGCACGTGATCAATTTCGGTATGTTTTTAGCCTGAAATATTTTGTTGATGTTTGTTGTATTTGTTTTCCTGGAATCAGTTCTTTAATCTTACATCCAAGAGACGGAGCCATTATATGCAACTATAACTCAAGATGTTCCACCTACCACTGTGGATGCTATAAAAGGGACTATCTCGGGCATTACTGGTCTTACTTCCATCTGACCAGTTTCAACTCTTACTTGAGGCTTTTTCATGACTCATTTTCAAATTTTGACTGGTTTTTCGACTTACTTTCTTTCATTGCTTTTTCTTGATGCAAAATAACGAAGCACCCACTTATACATTATAGTTTTTGTTTTTTAGTTACTAATTGGCTATCTCTCTTCGTGATCACATATTGGTGTTTTGGGAGTTTCACCTATTTCATTTATTCAATGAAATGTTTCATCATCTAAAAAAATTCAATAAGAATAACATTGCCAGGTCGTAGGAGATGTTAGGACCTTTATGCTAAAGAATCTGAATTTCGAATCTTGAGCTTGAGACATTACATTTTTCTTGTAAAGAATATTCAAATGGTAATAATTAGCTTTTGACATGATTATGAT

mRNA sequence

GGAACGGTGGAGCAATCTTTCAGAGAAATCAAGATCTTAGTTGATCGTATTGCTGCTGTCGACGTCACTATCAACGATGAGGAGACCTTCTTGCACATCTTTAATGGCTTACAGGCCGAGTTCAACACGTTTTGGACTTCCATTCGAACTCGAGACACAACATTAGTGCTCGCAGAACTGGAAGTTGTCCTCGACGCAGAAGCTAAGGCGATCATTGTTCACCAATCGGCATCAGAACCGGGGCGACAGGCGTTTGCTTGTAATGGCCAATCCCTTACTATCACTCACAATGGGAGCGAAGCTAATGGCAAATCTTCTGCTATGCGCTCTCTGTGTGTCTATCCTGAGTCCATCAATCTGTCCGACCTCCTTCAGGGCCGCATTAACAATTCCCATCTTCGTCAAATCCACGCCCGAGTCTTTCGTCTGCTGAAGCATCAAGACAATCTAATTGCAACTCGACTTATTGGCCACTACCCACATTCTGTTGGACTCAGAGTTTTCAATCAACTCATTCGCCCCAACATATTTCCTTGCAATGCCATTATCAGAGTACTTGCTGAACACAACTCTTCCTTCCTTGCCTTTTCCATCTTCAAATCTTTGAAGCACTTTTCACTTTCCCCTAATGACTTCACTTTTTCTTTCCTTCTCAAAGCGTTTCACCGTTCCAGCCATGCTCTAAATTTGAAACAAGTTCATACCCATGTCCTTAAAATGGGTTATTTGGGTGATTCTTTTATCTCCAATGCGCTTCTTGCAGTCTACGCGAGAGGCTTGAAGGATATGGCTTCTGCACATAAGGTGTTCGATGAAATGTCGGATAGAGATATGGCTTGTTGTTGGACTTCTTTGATTGCTGGCTATGCCCAGATGGGTCTTGCTGAAAAGGCTCTGCTGCTTTTTGTGATGATGATCAAAGAGAATATGCAGCCGGAGGACGACACCATGGTCAGTGTTCTGTCTGCTTGTTCCAAGTTTCATATTGCTGAGATTGAGAAATGGGTTGTAGAATTAAGACAACTGGTTAATAAATTTGATTCCAAGAGCTCTTGTTGTGATTCAATCAATATTGTTCTTATTTATCTATATGGGAAGTGGGGGATGATTGAGAAGAGTGAAGAAAAGTTTAATGAAATTGTTGATAAGAGAAGTGTGCTTGTTTGGAATTCAATGATAAATGCATATTTTCAGAATGGTTTCCCTGTTGAAGCCTTGGCCCTTTTCCGTCTAATGGTTGAAAATTCCCATTGCAAACCTAACCATGTTACAATGGTTACTGTCCTTTCAGCTTGTGCTCAAATAGGAGATTTGCAGCTCGGTTGTTGGGTTCATGAAGTTCTCGAATGTGGTGGCCGTAGAGGTATCATTGCATCAAACAAAATGTTAGCCACTGCATTGATTGATATGTATTGTAAAAGTGGTAGCTTGGAGAGGGCAAAAGAAGTTTTTCATCAACTAATCAACAAAGATGTAATCTCCTTCAATGCCATGATCATGGGCCTTGCAGTTAACGGCAAAGGCGATGAGGCATTGAAGCTTTTTTCCCAAATGCAAGAGGTTGATATAAGGCCAACGACCGGAACATTTATTGGTTTATTATCTGCTTGTAGCCATTCGGGTTTTCTAGAACAAGGGCGTCAAATTTTTATTGAAATGACTACCCGCTATTTAGTATTGCCTAGTTTAGAACACTATGCTTGTTACATTGATCTCCTTGCTCGGGCAGGCCACTTCGAAGATGCTCTTGAAGTTGTTTCAACCATGCCTTTTGAACCTAATAATTTTGTTTGGAGTTCTCTGCTGAGAGGCTGCCTACTCCATTCAAAATTTGAGTTGGCACAATATGTTTCCAAAAAGCTTGTTGAAGTGGATCCTGAAAACTCTGCTGGCTATGTAATGCAGGCTAATTCATTTGCTACAGATCTTCAATGGGATGATGTCTCGGCTCTGAGATGGTTTATGAGAGAAAAGGGTATCCGTAAGCAGCCAGGCCAGAGTTGGATCAGTATAGATGGAATTGTACATGAATTTTTCTCGGCAACCAAATCACATCCTTATGTTGATCTATTATACAACACGTTGAATGTGCTTGAAAAACAAATGAAGCTAGTAATCCCATAGAAAAAACCTTACAAGGTTTAGAATGCGTTTGGCTAAGATATAATACATTTGTCTTAAAAATCAGATGTTCAAATCCCACCTTGCATTGTTAAACATAAAAAGAAGGGAGATGTTTGCATAAATATCACAATATAAATATGTACTTGTGAATGATTGACTGTGCTGGTGGTATTCAGTCATAGCAAGGGTATAGGCGAAGTTTCATTTGGTAATATTTTCTACTATTGATATGAATCACCATGTCAATTATGATGGCCACTTTACGTTCCTAGGCTTCAATCTTGCCTAATCATGTGGTTGTGTGGGTGTAACTCTACCTTACACACTGGTAAGGAGTATTGATCTCTTCCCAACTTTCTGAATGTGATGTACTTTTATTGGTATATTTTTATTGCATTTCATAAGTTAGTGTGCCCCACTAAACTTTTCTAGCCATAAAAAATGCATCAGTTCATACACTACTATTATGTTTTAGATTTAGTTTTCTTAAGCACGTGATCAATTTCGGTATGTTTTTAGCCTGAAATATTTTGTTGATGTTTGTTGTATTTGTTTTCCTGGAATCAGTTCTTTAATCTTACATCCAAGAGACGGAGCCATTATATGCAACTATAACTCAAGATGTTCCACCTACCACTGTGGATGCTATAAAAGGGACTATCTCGGGCATTACTGGTCTTACTTCCATCTGACCAGTTTCAACTCTTACTTGAGGCTTTTTCATGACTCATTTTCAAATTTTGACTGGTTTTTCGACTTACTTTCTTTCATTGCTTTTTCTTGATGCAAAATAACGAAGCACCCACTTATACATTATAGTTTTTGTTTTTTAGTTACTAATTGGCTATCTCTCTTCGTGATCACATATTGGTGTTTTGGGAGTTTCACCTATTTCATTTATTCAATGAAATGTTTCATCATCTAAAAAAATTCAATAAGAATAACATTGCCAGGTCGTAGGAGATGTTAGGACCTTTATGCTAAAGAATCTGAATTTCGAATCTTGAGCTTGAGACATTACATTTTTCTTGTAAAGAATATTCAAATGGTAATAATTAGCTTTTGACATGATTATGAT

Coding sequence (CDS)

GGAACGGTGGAGCAATCTTTCAGAGAAATCAAGATCTTAGTTGATCGTATTGCTGCTGTCGACGTCACTATCAACGATGAGGAGACCTTCTTGCACATCTTTAATGGCTTACAGGCCGAGTTCAACACGTTTTGGACTTCCATTCGAACTCGAGACACAACATTAGTGCTCGCAGAACTGGAAGTTGTCCTCGACGCAGAAGCTAAGGCGATCATTGTTCACCAATCGGCATCAGAACCGGGGCGACAGGCGTTTGCTTGTAATGGCCAATCCCTTACTATCACTCACAATGGGAGCGAAGCTAATGGCAAATCTTCTGCTATGCGCTCTCTGTGTGTCTATCCTGAGTCCATCAATCTGTCCGACCTCCTTCAGGGCCGCATTAACAATTCCCATCTTCGTCAAATCCACGCCCGAGTCTTTCGTCTGCTGAAGCATCAAGACAATCTAATTGCAACTCGACTTATTGGCCACTACCCACATTCTGTTGGACTCAGAGTTTTCAATCAACTCATTCGCCCCAACATATTTCCTTGCAATGCCATTATCAGAGTACTTGCTGAACACAACTCTTCCTTCCTTGCCTTTTCCATCTTCAAATCTTTGAAGCACTTTTCACTTTCCCCTAATGACTTCACTTTTTCTTTCCTTCTCAAAGCGTTTCACCGTTCCAGCCATGCTCTAAATTTGAAACAAGTTCATACCCATGTCCTTAAAATGGGTTATTTGGGTGATTCTTTTATCTCCAATGCGCTTCTTGCAGTCTACGCGAGAGGCTTGAAGGATATGGCTTCTGCACATAAGGTGTTCGATGAAATGTCGGATAGAGATATGGCTTGTTGTTGGACTTCTTTGATTGCTGGCTATGCCCAGATGGGTCTTGCTGAAAAGGCTCTGCTGCTTTTTGTGATGATGATCAAAGAGAATATGCAGCCGGAGGACGACACCATGGTCAGTGTTCTGTCTGCTTGTTCCAAGTTTCATATTGCTGAGATTGAGAAATGGGTTGTAGAATTAAGACAACTGGTTAATAAATTTGATTCCAAGAGCTCTTGTTGTGATTCAATCAATATTGTTCTTATTTATCTATATGGGAAGTGGGGGATGATTGAGAAGAGTGAAGAAAAGTTTAATGAAATTGTTGATAAGAGAAGTGTGCTTGTTTGGAATTCAATGATAAATGCATATTTTCAGAATGGTTTCCCTGTTGAAGCCTTGGCCCTTTTCCGTCTAATGGTTGAAAATTCCCATTGCAAACCTAACCATGTTACAATGGTTACTGTCCTTTCAGCTTGTGCTCAAATAGGAGATTTGCAGCTCGGTTGTTGGGTTCATGAAGTTCTCGAATGTGGTGGCCGTAGAGGTATCATTGCATCAAACAAAATGTTAGCCACTGCATTGATTGATATGTATTGTAAAAGTGGTAGCTTGGAGAGGGCAAAAGAAGTTTTTCATCAACTAATCAACAAAGATGTAATCTCCTTCAATGCCATGATCATGGGCCTTGCAGTTAACGGCAAAGGCGATGAGGCATTGAAGCTTTTTTCCCAAATGCAAGAGGTTGATATAAGGCCAACGACCGGAACATTTATTGGTTTATTATCTGCTTGTAGCCATTCGGGTTTTCTAGAACAAGGGCGTCAAATTTTTATTGAAATGACTACCCGCTATTTAGTATTGCCTAGTTTAGAACACTATGCTTGTTACATTGATCTCCTTGCTCGGGCAGGCCACTTCGAAGATGCTCTTGAAGTTGTTTCAACCATGCCTTTTGAACCTAATAATTTTGTTTGGAGTTCTCTGCTGAGAGGCTGCCTACTCCATTCAAAATTTGAGTTGGCACAATATGTTTCCAAAAAGCTTGTTGAAGTGGATCCTGAAAACTCTGCTGGCTATGTAATGCAGGCTAATTCATTTGCTACAGATCTTCAATGGGATGATGTCTCGGCTCTGAGATGGTTTATGAGAGAAAAGGGTATCCGTAAGCAGCCAGGCCAGAGTTGGATCAGTATAGATGGAATTGTACATGAATTTTTCTCGGCAACCAAATCACATCCTTATGTTGATCTATTATACAACACGTTGAATGTGCTTGAAAAACAAATGAAGCTAGTAATCCCATAG

Protein sequence

GTVEQSFREIKILVDRIAAVDVTINDEETFLHIFNGLQAEFNTFWTSIRTRDTTLVLAELEVVLDAEAKAIIVHQSASEPGRQAFACNGQSLTITHNGSEANGKSSAMRSLCVYPESINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKVFDEMSDRDMACCWTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRQLVNKFDSKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGFPVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFSQMQEVDIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEHYACYIDLLARAGHFEDALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQMKLVIP

Homology

[Close]

BLAST of CcUC06G113550 vs. NCBI nr
Match: XP_038888799.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 1140.9 bits (2950), Expect = 0.0e+00
Identity = 565/610 (92.62%), Postives = 582/610 (95.41%), Query Frame = 0


Query: 98  GSEANGKSSAMRSLCVYPESINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIG 157
           G   NGKS AMR+LC+ P+SINLSDLLQGRI+NSHLRQIHARVFRLLKHQDNLIATRLIG
Sbjct: 17  GQMVNGKSYAMRALCINPDSINLSDLLQGRISNSHLRQIHARVFRLLKHQDNLIATRLIG 76

Query: 158 HYPHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFL 217
           HYPHSVGL VFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKH SLSPNDFTFSFL
Sbjct: 77  HYPHSVGLSVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHLSLSPNDFTFSFL 136

Query: 218 LKAFHRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKVFDEMSDRD 277
           LKAFHRSSHALN+KQVHTHVLKMGYLGDSFISNALL VYARGLKDMASAHK+FDEMS R+
Sbjct: 137 LKAFHRSSHALNVKQVHTHVLKMGYLGDSFISNALLGVYARGLKDMASAHKLFDEMSGRE 196

Query: 278 MACCWTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVV 337
           +A CWTSLIAGYAQMGLAE ALL FVMMI+ENMQPEDDTMVSVLSACSKFHIAEIEKWVV
Sbjct: 197 IA-CWTSLIAGYAQMGLAENALLHFVMMIEENMQPEDDTMVSVLSACSKFHIAEIEKWVV 256

Query: 338 ELRQLVNKFDSKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYF 397
           ELRQLVNKFD KSSCCDSINIVLIYLYGKWG IEKSEEKFNEIVDKRSVLVWNSMINAYF
Sbjct: 257 ELRQLVNKFDPKSSCCDSINIVLIYLYGKWGKIEKSEEKFNEIVDKRSVLVWNSMINAYF 316

Query: 398 QNGFPVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGII 457
           QNG PVE L LFRLMVENSHCKPNHVTMVTVLSACA IGDLQLGCWVH+ LE GGRRG+I
Sbjct: 317 QNGCPVETLTLFRLMVENSHCKPNHVTMVTVLSACALIGDLQLGCWVHDFLEHGGRRGVI 376

Query: 458 ASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFSQ 517
           ASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLF+Q
Sbjct: 377 ASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQ 436

Query: 518 MQEVDIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEHYACYIDLLARAG 577
           MQEVDIRPTTGTF+ LLSACSHSGFLEQGRQIFIEMTTRY +LP+LEHYACYIDLLARAG
Sbjct: 437 MQEVDIRPTTGTFVSLLSACSHSGFLEQGRQIFIEMTTRYFILPTLEHYACYIDLLARAG 496

Query: 578 HFEDALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQAN 637
           HFEDALEVVSTMPFEPNN VWSSLL GCLLHSKFELAQYVSKKLVEVDPENSAGYVMQAN
Sbjct: 497 HFEDALEVVSTMPFEPNNCVWSSLLGGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQAN 556

Query: 638 SFATDLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNV 697
           SFATDLQWDDVSALRWFMREKG+ KQPGQSWISIDGIVHEFFSA KSHP VDLLYNTLN 
Sbjct: 557 SFATDLQWDDVSALRWFMREKGVHKQPGQSWISIDGIVHEFFSAMKSHPSVDLLYNTLNE 616

Query: 698 LEKQMKLVIP 708
           LEKQMKLV+P
Sbjct: 617 LEKQMKLVLP 625

[Close]

BLAST of CcUC06G113550 vs. NCBI nr
Match: TYK06804.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 554/606 (91.42%), Postives = 577/606 (95.21%), Query Frame = 0


Query: 102 NGKSSAMRSLCVYPESINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 161
           N KS AMR L V PE INLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH
Sbjct: 30  NIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 89

Query: 162 SVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAF 221
           SVGLRVFNQLIRPNIFPCNAIIRVLAEHN+SFLA SIFKSLKH SLSPNDFTFSFLLKAF
Sbjct: 90  SVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLKAF 149

Query: 222 HRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKVFDEMSDRDMACC 281
           HRS +AL++KQVHTHVLKMGY GDSFISNALL VYARGLKDMASAHKVFDEMSDR+MACC
Sbjct: 150 HRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMACC 209

Query: 282 WTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRQ 341
           WTSLIAGYAQMGLAEKA+L+FV MIKENMQPEDDTMVSVLSACSKF IAEIEKWVV LR+
Sbjct: 210 WTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVALRE 269

Query: 342 LVNKFDSKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGF 401
           LVNKFDSKSSCCDSINIVLIYLYGKWGM+EKSEEKFNEI+DK+SVLVWNSMINAYFQNGF
Sbjct: 270 LVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQNGF 329

Query: 402 PVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNK 461
           PVEAL LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIASNK
Sbjct: 330 PVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIASNK 389

Query: 462 MLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFSQMQEV 521
           MLATALIDMYCK GSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLF+QMQE+
Sbjct: 390 MLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEI 449

Query: 522 DIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEHYACYIDLLARAGHFED 581
           DIRP+TGTFIGLLSACSHSGFLEQG QIFIEMTT+YL+ PSLEHYACYIDLLARAG FED
Sbjct: 450 DIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRFED 509

Query: 582 ALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFAT 641
           ALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSFA+
Sbjct: 510 ALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSFAS 569

Query: 642 DLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQ 701
           D QWDDVSALRWFMREKG+ KQPGQSWISIDG VHEFFSATKSHPYVDLLY+TLN L+KQ
Sbjct: 570 DRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELDKQ 629

Query: 702 MKLVIP 708
            KLVIP
Sbjct: 630 TKLVIP 635

[Close]

BLAST of CcUC06G113550 vs. NCBI nr
Match: XP_008455016.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 554/606 (91.42%), Postives = 577/606 (95.21%), Query Frame = 0


Query: 102 NGKSSAMRSLCVYPESINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 161
           N KS AMR L V PE INLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH
Sbjct: 3   NIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 62

Query: 162 SVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAF 221
           SVGLRVFNQLIRPNIFPCNAIIRVLAEHN+SFLA SIFKSLKH SLSPNDFTFSFLLKAF
Sbjct: 63  SVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLKAF 122

Query: 222 HRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKVFDEMSDRDMACC 281
           HRS +AL++KQVHTHVLKMGY GDSFISNALL VYARGLKDMASAHKVFDEMSDR+MACC
Sbjct: 123 HRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMACC 182

Query: 282 WTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRQ 341
           WTSLIAGYAQMGLAEKA+L+FV MIKENMQPEDDTMVSVLSACSKF IAEIEKWVV LR+
Sbjct: 183 WTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVALRE 242

Query: 342 LVNKFDSKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGF 401
           LVNKFDSKSSCCDSINIVLIYLYGKWGM+EKSEEKFNEI+DK+SVLVWNSMINAYFQNGF
Sbjct: 243 LVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQNGF 302

Query: 402 PVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNK 461
           PVEAL LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIASNK
Sbjct: 303 PVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIASNK 362

Query: 462 MLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFSQMQEV 521
           MLATALIDMYCK GSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLF+QMQE+
Sbjct: 363 MLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEI 422

Query: 522 DIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEHYACYIDLLARAGHFED 581
           DIRP+TGTFIGLLSACSHSGFLEQG QIFIEMTT+YL+ PSLEHYACYIDLLARAG FED
Sbjct: 423 DIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRFED 482

Query: 582 ALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFAT 641
           ALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSFA+
Sbjct: 483 ALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSFAS 542

Query: 642 DLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQ 701
           D QWDDVSALRWFMREKG+ KQPGQSWISIDG VHEFFSATKSHPYVDLLY+TLN L+KQ
Sbjct: 543 DRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELDKQ 602

Query: 702 MKLVIP 708
            KLVIP
Sbjct: 603 TKLVIP 608

[Close]

BLAST of CcUC06G113550 vs. NCBI nr
Match: KAA0031351.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1124.8 bits (2908), Expect = 0.0e+00
Identity = 553/606 (91.25%), Postives = 577/606 (95.21%), Query Frame = 0


Query: 102 NGKSSAMRSLCVYPESINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 161
           N KS AMR L V PE INLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH
Sbjct: 30  NIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 89

Query: 162 SVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAF 221
           SVGLRVFNQLIRPNIFPCNAIIRVLAEHN+SFLA SIFKSLKH SLSPNDFTFSFLLKAF
Sbjct: 90  SVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLKAF 149

Query: 222 HRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKVFDEMSDRDMACC 281
           HRS +AL++KQVHTHVLKMGY GDSFISNALL VYARGLKDMASAHKVFDEMSDR+MACC
Sbjct: 150 HRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMACC 209

Query: 282 WTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRQ 341
           WTSLIAGYAQMGLAEKA+L+FV MIKENMQPEDDTMVSVLSACSKF IAEIEKWVV LR+
Sbjct: 210 WTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVALRE 269

Query: 342 LVNKFDSKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGF 401
           LVNKFDSKSSCCDSINIVLIYLYGKWGM+EKSEEKFNEI+DK+SVLVWNSMINAYFQNGF
Sbjct: 270 LVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQNGF 329

Query: 402 PVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNK 461
           PVEAL LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIASNK
Sbjct: 330 PVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIASNK 389

Query: 462 MLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFSQMQEV 521
           MLATALID+YCK GSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLF+QMQE+
Sbjct: 390 MLATALIDLYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEI 449

Query: 522 DIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEHYACYIDLLARAGHFED 581
           DIRP+TGTFIGLLSACSHSGFLEQG QIFIEMTT+YL+ PSLEHYACYIDLLARAG FED
Sbjct: 450 DIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRFED 509

Query: 582 ALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFAT 641
           ALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSFA+
Sbjct: 510 ALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSFAS 569

Query: 642 DLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQ 701
           D QWDDVSALRWFMREKG+ KQPGQSWISIDG VHEFFSATKSHPYVDLLY+TLN L+KQ
Sbjct: 570 DRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELDKQ 629

Query: 702 MKLVIP 708
            KLVIP
Sbjct: 630 TKLVIP 635

[Close]

BLAST of CcUC06G113550 vs. NCBI nr
Match: XP_031744265.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 1117.8 bits (2890), Expect = 0.0e+00
Identity = 546/600 (91.00%), Postives = 572/600 (95.33%), Query Frame = 0


Query: 108 MRSLCVYPESINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 167
           MR LCV PE I+LSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV
Sbjct: 1   MRCLCVNPEFISLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 60

Query: 168 FNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHA 227
           FNQLIRPNIFPCNAIIRVLAEHNSSF A SIFK LKH SLSPNDFTFSFLLKAFHRS +A
Sbjct: 61  FNQLIRPNIFPCNAIIRVLAEHNSSFFALSIFKYLKHLSLSPNDFTFSFLLKAFHRSCNA 120

Query: 228 LNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKVFDEMSDRDMACCWTSLIA 287
           LN+KQVHTHVLKMGY GDSFISN+LL VYARGLK+MASAHK+FDEMSDR+MACCWTSLIA
Sbjct: 121 LNVKQVHTHVLKMGYFGDSFISNSLLGVYARGLKEMASAHKLFDEMSDREMACCWTSLIA 180

Query: 288 GYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRQLVNKFD 347
           GYAQMGLAEKA+LLF MM+KEN+QPEDDT+VSVLSACSK  IAEIEKWVVELRQLVNK D
Sbjct: 181 GYAQMGLAEKAMLLFFMMVKENIQPEDDTIVSVLSACSKLQIAEIEKWVVELRQLVNKCD 240

Query: 348 SKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGFPVEALA 407
           SK SCCDSINIVLIYLYGKWGM+EKSEEKFNE+VDKRSVLVWNSMINAYFQNGFPVEAL 
Sbjct: 241 SKRSCCDSINIVLIYLYGKWGMVEKSEEKFNEVVDKRSVLVWNSMINAYFQNGFPVEALT 300

Query: 408 LFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNKMLATAL 467
           LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+ GGR+GIIASNKMLAT+L
Sbjct: 301 LFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRGGRKGIIASNKMLATSL 360

Query: 468 IDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFSQMQEVDIRPTT 527
           IDMYCK GSLERAKEVFHQLINKDVI+FNAMIMGLAVN KGDEALKLF+QMQE++I P+T
Sbjct: 361 IDMYCKCGSLERAKEVFHQLINKDVITFNAMIMGLAVNSKGDEALKLFAQMQEINIIPST 420

Query: 528 GTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEHYACYIDLLARAGHFEDALEVVS 587
           GTFIGLLSACSHSGFLEQGRQIFIEMTT YLV PSLEHYACYIDLLARAGHF+DALEV+S
Sbjct: 421 GTFIGLLSACSHSGFLEQGRQIFIEMTTHYLVSPSLEHYACYIDLLARAGHFDDALEVIS 480

Query: 588 TMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 647
           TMPFEPNNFVWSSLLRGCLLHS+FELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD
Sbjct: 481 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 540

Query: 648 VSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQMKLVIP 707
           VSALRWFMREKG+ KQPGQSWISIDG VHEFFSATKSHPYVDLLY TLN LEKQMKLVIP
Sbjct: 541 VSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYTTLNELEKQMKLVIP 600

[Close]

BLAST of CcUC06G113550 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 7.0e-101
Identity = 212/606 (34.98%), Postives = 338/606 (55.78%), Query Frame = 0


Query: 133 LRQIHARVFRLLKHQDNLIATRLIGH---YPHSVGL----RVFNQLIRPNIFPCNAIIRV 192
           LR IHA++ ++  H  N   ++LI      PH  GL     VF  +  PN+   N + R 
Sbjct: 49  LRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG 108

Query: 193 LAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHTHVLKMGYLGD 252
            A  +    A  ++  +    L PN +TF F+LK+  +S      +Q+H HVLK+G   D
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168

Query: 253 SFISNALLAVYARGLKDMASAHKVFDEMSDRDM--------------------------- 312
            ++  +L+++Y +  + +  AHKVFD+   RD+                           
Sbjct: 169 LYVHTSLISMYVQNGR-LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 228

Query: 313 ---ACCWTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKW 372
                 W ++I+GYA+ G  ++AL LF  M+K N++P++ TMV+V+SAC+       +  
Sbjct: 229 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA-------QSG 288

Query: 373 VVELRQLVNKFDSKSSCCDSINIV--LIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMI 432
            +EL + V+ +        ++ IV  LI LY K G +E +   F E +  + V+ WN++I
Sbjct: 289 SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF-ERLPYKDVISWNTLI 348

Query: 433 NAYFQNGFPVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGR 492
             Y       EAL LF+ M+ +    PN VTM+++L ACA +G + +G W+H  ++   R
Sbjct: 349 GGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYID--KR 408

Query: 493 RGIIASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALK 552
              + +   L T+LIDMY K G +E A +VF+ +++K + S+NAMI G A++G+ D +  
Sbjct: 409 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 468

Query: 553 LFSQMQEVDIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEHYACYIDLL 612
           LFS+M+++ I+P   TF+GLLSACSHSG L+ GR IF  MT  Y + P LEHY C IDLL
Sbjct: 469 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 528

Query: 613 ARAGHFEDALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYV 672
             +G F++A E+++ M  EP+  +W SLL+ C +H   EL +  ++ L++++PEN   YV
Sbjct: 529 GHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 588

Query: 673 MQANSFATDLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYN 700
           + +N +A+  +W++V+  R  + +KG++K PG S I ID +VHEF    K HP    +Y 
Sbjct: 589 LLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 642

[Close]

BLAST of CcUC06G113550 vs. ExPASy Swiss-Prot
Match: Q9SR82 (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H84 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.0e-95
Identity = 200/585 (34.19%), Postives = 321/585 (54.87%), Query Frame = 0


Query: 131 SHLRQIHARVFRLLKHQD----NLIATRLIGHYPHSVGLRVFNQLIRPNIFPCNAIIRVL 190
           +HL+QIH  +     H D    NL+  R +          +F+    PNIF  N++I   
Sbjct: 27  NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86

Query: 191 AEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHTHVLKMGYLGDS 250
             ++       +F S++   L  + FTF  +LKA  R+S       +H+ V+K G+  D 
Sbjct: 87  VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146

Query: 251 FISNALLAVYARGLKDMASAHKVFDEMSDRDMACCWTSLIAGYAQMGLAEKALLLFVMMI 310
               +LL++Y+ G   +  AHK+FDE+ DR +   WT+L +GY   G   +A+ LF  M+
Sbjct: 147 AAMTSLLSIYS-GSGRLNDAHKLFDEIPDRSVV-TWTALFSGYTTSGRHREAIDLFKKMV 206

Query: 311 KENMQPEDDTMVSVLSACSKFHIAEIE--KWVV----ELRQLVNKFDSKSSCCDSINIVL 370
           +  ++P+   +V VLSAC   H+ +++  +W+V    E+    N F         +   L
Sbjct: 207 EMGVKPDSYFIVQVLSAC--VHVGDLDSGEWIVKYMEEMEMQKNSF---------VRTTL 266

Query: 371 IYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGFPVEALALFRLMVENSHCKP 430
           + LY K G +EK+   F+ +V+K  ++ W++MI  Y  N FP E + LF  M++  + KP
Sbjct: 267 VNLYAKCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQ-ENLKP 326

Query: 431 NHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNKMLATALIDMYCKSGSLERA 490
           +  ++V  LS+CA +G L LG W   +++    R    +N  +A ALIDMY K G++ R 
Sbjct: 327 DQFSIVGFLSSCASLGALDLGEWGISLID----RHEFLTNLFMANALIDMYAKCGAMARG 386

Query: 491 KEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFSQMQEVDIRPTTGTFIGLLSACSHS 550
            EVF ++  KD++  NA I GLA NG    +  +F Q +++ I P   TF+GLL  C H+
Sbjct: 387 FEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHA 446

Query: 551 GFLEQGRQIFIEMTTRYLVLPSLEHYACYIDLLARAGHFEDALEVVSTMPFEPNNFVWSS 610
           G ++ G + F  ++  Y +  ++EHY C +DL  RAG  +DA  ++  MP  PN  VW +
Sbjct: 447 GLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGA 506

Query: 611 LLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDDVSALRWFMREKGI 670
           LL GC L    +LA+ V K+L+ ++P N+  YV  +N ++   +WD+ + +R  M +KG+
Sbjct: 507 LLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGM 566

Query: 671 RKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQMKLV 706
           +K PG SWI ++G VHEF +  KSHP  D +Y  L  L  +M+L+
Sbjct: 567 KKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLM 592

[Close]

BLAST of CcUC06G113550 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.3e-94
Identity = 199/618 (32.20%), Postives = 335/618 (54.21%), Query Frame = 0


Query: 123 LLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHS------VGLRVFNQLIRPNI 182
           L++  ++   L+Q H  + R     D   A++L      S         +VF+++ +PN 
Sbjct: 36  LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95

Query: 183 FPCNAIIRVLAEHNSSFLAFSIFKSL-KHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHT 242
           F  N +IR  A      L+   F  +       PN +TF FL+KA    S     + +H 
Sbjct: 96  FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155

Query: 243 HVLKMGYLGDSFISNALLAVYARGLKDMASAHKVFDEMSDRDMACCWTSLIAGYAQMGLA 302
             +K     D F++N+L+  Y     D+ SA KVF  + ++D+   W S+I G+ Q G  
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEKDVV-SWNSMINGFVQKGSP 215

Query: 303 EKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRQLVNKFDSKSSCCDS 362
           +KAL LF  M  E+++    TMV VLSAC+K    E  + V    +     +++ +   +
Sbjct: 216 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE-----ENRVNVNLT 275

Query: 363 INIVLIYLYGKWGMIEKSEEKFNEIVDK------------------------------RS 422
           +   ++ +Y K G IE ++  F+ + +K                              + 
Sbjct: 276 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 335

Query: 423 VLVWNSMINAYFQNGFPVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVH 482
           ++ WN++I+AY QNG P EAL +F  +    + K N +T+V+ LSACAQ+G L+LG W+H
Sbjct: 336 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 395

Query: 483 EVLECGGRRGIIASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVN 542
             ++  G    I  N  + +ALI MY K G LE+++EVF+ +  +DV  ++AMI GLA++
Sbjct: 396 SYIKKHG----IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMH 455

Query: 543 GKGDEALKLFSQMQEVDIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEH 602
           G G+EA+ +F +MQE +++P   TF  +  ACSH+G +++   +F +M + Y ++P  +H
Sbjct: 456 GCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH 515

Query: 603 YACYIDLLARAGHFEDALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVD 662
           YAC +D+L R+G+ E A++ +  MP  P+  VW +LL  C +H+   LA+    +L+E++
Sbjct: 516 YACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELE 575

Query: 663 PENSAGYVMQANSFATDLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSH 704
           P N   +V+ +N +A   +W++VS LR  MR  G++K+PG S I IDG++HEF S   +H
Sbjct: 576 PRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAH 635

[Close]

BLAST of CcUC06G113550 vs. ExPASy Swiss-Prot
Match: Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.0e-91
Identity = 192/576 (33.33%), Postives = 324/576 (56.25%), Query Frame = 0


Query: 129 NNSHLRQIHARVFRLLKHQDNLIATRLIGHY----PHSVGLRVFNQLIRPNIFPCNAIIR 188
           N + ++Q+HA++ R   H+D  IA +LI         ++ +RVFNQ+  PN+  CN++IR
Sbjct: 31  NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90

Query: 189 VLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHTHVLKMGYLG 248
             A+++  + AF +F  ++ F L  ++FT+ FLLKA    S    +K +H H+ K+G   
Sbjct: 91  AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150

Query: 249 DSFISNALLAVYAR-GLKDMASAHKVFDEMSDRDMACCWTSLIAGYAQMGLAEKALLLFV 308
           D ++ NAL+  Y+R G   +  A K+F++MS+RD    W S++ G  + G    A  LF 
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD-TVSWNSMLGGLVKAGELRDARRLFD 210

Query: 309 MMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRQLVNKFDSKSSCCDSINIVLIYL 368
            M + ++    +TM+   + C +   A          +L  K   +++   S    ++  
Sbjct: 211 EMPQRDL-ISWNTMLDGYARCREMSKA---------FELFEKMPERNTVSWS---TMVMG 270

Query: 369 YGKWGMIEKSEEKFNEI-VDKRSVLVWNSMINAYFQNGFPVEALALFRLMVENSHCKPNH 428
           Y K G +E +   F+++ +  ++V+ W  +I  Y + G   EA  L   MV  S  K + 
Sbjct: 271 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA-SGLKFDA 330

Query: 429 VTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNKMLATALIDMYCKSGSLERAKE 488
             ++++L+AC + G L LG  +H +L    +R  + SN  +  AL+DMY K G+L++A +
Sbjct: 331 AAVISILAACTESGLLSLGMRIHSIL----KRSNLGSNAYVLNALLDMYAKCGNLKKAFD 390

Query: 489 VFHQLINKDVISFNAMIMGLAVNGKGDEALKLFSQMQEVDIRPTTGTFIGLLSACSHSGF 548
           VF+ +  KD++S+N M+ GL V+G G EA++LFS+M+   IRP   TFI +L +C+H+G 
Sbjct: 391 VFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGL 450

Query: 549 LEQGRQIFIEMTTRYLVLPSLEHYACYIDLLARAGHFEDALEVVSTMPFEPNNFVWSSLL 608
           +++G   F  M   Y ++P +EHY C +DLL R G  ++A++VV TMP EPN  +W +LL
Sbjct: 451 IDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALL 510

Query: 609 RGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDDVSALRWFMREKGIRK 668
             C +H++ ++A+ V   LV++DP +   Y + +N +A    W+ V+ +R  M+  G+ K
Sbjct: 511 GACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEK 570

Query: 669 QPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVL 699
             G S + ++  +HEF    KSHP  D +Y  L  L
Sbjct: 571 PSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587

[Close]

BLAST of CcUC06G113550 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.9e-90
Identity = 204/612 (33.33%), Postives = 340/612 (55.56%), Query Frame = 0


Query: 104 KSSAMRSLCVYPESINLSD-----LLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGH 163
           ++S + S  +Y  S   SD     L+    + + L+QIHAR+  L       + T+LI H
Sbjct: 3   EASCLASPLLYTNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI-H 62

Query: 164 YPHSVG-----LRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFT 223
              S G      +VF+ L RP IFP NAIIR  + +N    A  ++ +++   +SP+ FT
Sbjct: 63  ASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFT 122

Query: 224 FSFLLKAFHRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKVFD-- 283
           F  LLKA    SH    + VH  V ++G+  D F+ N L+A+YA+  + + SA  VF+  
Sbjct: 123 FPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAK-CRRLGSARTVFEGL 182

Query: 284 EMSDRDMACCWTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAE 343
            + +R +   WT++++ YAQ G   +AL +F  M K +++P+   +VSVL+A   F   +
Sbjct: 183 PLPERTIV-SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA---FTCLQ 242

Query: 344 IEKWVVELRQLVNKFDSKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNS 403
             K    +   V K   +      + I L  +Y K G +  ++  F++ +   ++++WN+
Sbjct: 243 DLKQGRSIHASVVKMGLEIE--PDLLISLNTMYAKCGQVATAKILFDK-MKSPNLILWNA 302

Query: 404 MINAYFQNGFPVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECG 463
           MI+ Y +NG+  EA+ +F  M+ N   +P+ +++ + +SACAQ+G L+    ++E +   
Sbjct: 303 MISGYAKNGYAREAIDMFHEMI-NKDVRPDTISITSAISACAQVGSLEQARSMYEYV--- 362

Query: 464 GRRGIIASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEA 523
             R     +  +++ALIDM+ K GS+E A+ VF + +++DV+ ++AMI+G  ++G+  EA
Sbjct: 363 -GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 422

Query: 524 LKLFSQMQEVDIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEHYACYID 583
           + L+  M+   + P   TF+GLL AC+HSG + +G   F  M   + + P  +HYAC ID
Sbjct: 423 ISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVID 482

Query: 584 LLARAGHFEDALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAG 643
           LL RAGH + A EV+  MP +P   VW +LL  C  H   EL +Y +++L  +DP N+  
Sbjct: 483 LLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGH 542

Query: 644 YVMQANSFATDLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLL 703
           YV  +N +A    WD V+ +R  M+EKG+ K  G SW+ + G +  F    KSHP  + +
Sbjct: 543 YVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 599

[Close]

BLAST of CcUC06G113550 vs. ExPASy TrEMBL
Match: A0A5D3C6A4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001060 PE=4 SV=1)

HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 554/606 (91.42%), Postives = 577/606 (95.21%), Query Frame = 0


Query: 102 NGKSSAMRSLCVYPESINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 161
           N KS AMR L V PE INLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH
Sbjct: 30  NIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 89

Query: 162 SVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAF 221
           SVGLRVFNQLIRPNIFPCNAIIRVLAEHN+SFLA SIFKSLKH SLSPNDFTFSFLLKAF
Sbjct: 90  SVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLKAF 149

Query: 222 HRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKVFDEMSDRDMACC 281
           HRS +AL++KQVHTHVLKMGY GDSFISNALL VYARGLKDMASAHKVFDEMSDR+MACC
Sbjct: 150 HRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMACC 209

Query: 282 WTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRQ 341
           WTSLIAGYAQMGLAEKA+L+FV MIKENMQPEDDTMVSVLSACSKF IAEIEKWVV LR+
Sbjct: 210 WTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVALRE 269

Query: 342 LVNKFDSKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGF 401
           LVNKFDSKSSCCDSINIVLIYLYGKWGM+EKSEEKFNEI+DK+SVLVWNSMINAYFQNGF
Sbjct: 270 LVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQNGF 329

Query: 402 PVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNK 461
           PVEAL LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIASNK
Sbjct: 330 PVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIASNK 389

Query: 462 MLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFSQMQEV 521
           MLATALIDMYCK GSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLF+QMQE+
Sbjct: 390 MLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEI 449

Query: 522 DIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEHYACYIDLLARAGHFED 581
           DIRP+TGTFIGLLSACSHSGFLEQG QIFIEMTT+YL+ PSLEHYACYIDLLARAG FED
Sbjct: 450 DIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRFED 509

Query: 582 ALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFAT 641
           ALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSFA+
Sbjct: 510 ALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSFAS 569

Query: 642 DLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQ 701
           D QWDDVSALRWFMREKG+ KQPGQSWISIDG VHEFFSATKSHPYVDLLY+TLN L+KQ
Sbjct: 570 DRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELDKQ 629

Query: 702 MKLVIP 708
            KLVIP
Sbjct: 630 TKLVIP 635

[Close]

BLAST of CcUC06G113550 vs. ExPASy TrEMBL
Match: A0A1S3BZG8 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495291 PE=4 SV=1)

HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 554/606 (91.42%), Postives = 577/606 (95.21%), Query Frame = 0


Query: 102 NGKSSAMRSLCVYPESINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 161
           N KS AMR L V PE INLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH
Sbjct: 3   NIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 62

Query: 162 SVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAF 221
           SVGLRVFNQLIRPNIFPCNAIIRVLAEHN+SFLA SIFKSLKH SLSPNDFTFSFLLKAF
Sbjct: 63  SVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLKAF 122

Query: 222 HRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKVFDEMSDRDMACC 281
           HRS +AL++KQVHTHVLKMGY GDSFISNALL VYARGLKDMASAHKVFDEMSDR+MACC
Sbjct: 123 HRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMACC 182

Query: 282 WTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRQ 341
           WTSLIAGYAQMGLAEKA+L+FV MIKENMQPEDDTMVSVLSACSKF IAEIEKWVV LR+
Sbjct: 183 WTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVALRE 242

Query: 342 LVNKFDSKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGF 401
           LVNKFDSKSSCCDSINIVLIYLYGKWGM+EKSEEKFNEI+DK+SVLVWNSMINAYFQNGF
Sbjct: 243 LVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQNGF 302

Query: 402 PVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNK 461
           PVEAL LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIASNK
Sbjct: 303 PVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIASNK 362

Query: 462 MLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFSQMQEV 521
           MLATALIDMYCK GSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLF+QMQE+
Sbjct: 363 MLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEI 422

Query: 522 DIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEHYACYIDLLARAGHFED 581
           DIRP+TGTFIGLLSACSHSGFLEQG QIFIEMTT+YL+ PSLEHYACYIDLLARAG FED
Sbjct: 423 DIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRFED 482

Query: 582 ALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFAT 641
           ALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSFA+
Sbjct: 483 ALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSFAS 542

Query: 642 DLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQ 701
           D QWDDVSALRWFMREKG+ KQPGQSWISIDG VHEFFSATKSHPYVDLLY+TLN L+KQ
Sbjct: 543 DRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELDKQ 602

Query: 702 MKLVIP 708
            KLVIP
Sbjct: 603 TKLVIP 608

[Close]

BLAST of CcUC06G113550 vs. ExPASy TrEMBL
Match: A0A5A7SP64 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G001050 PE=4 SV=1)

HSP 1 Score: 1124.8 bits (2908), Expect = 0.0e+00
Identity = 553/606 (91.25%), Postives = 577/606 (95.21%), Query Frame = 0


Query: 102 NGKSSAMRSLCVYPESINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 161
           N KS AMR L V PE INLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH
Sbjct: 30  NIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 89

Query: 162 SVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAF 221
           SVGLRVFNQLIRPNIFPCNAIIRVLAEHN+SFLA SIFKSLKH SLSPNDFTFSFLLKAF
Sbjct: 90  SVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLKAF 149

Query: 222 HRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKVFDEMSDRDMACC 281
           HRS +AL++KQVHTHVLKMGY GDSFISNALL VYARGLKDMASAHKVFDEMSDR+MACC
Sbjct: 150 HRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMACC 209

Query: 282 WTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRQ 341
           WTSLIAGYAQMGLAEKA+L+FV MIKENMQPEDDTMVSVLSACSKF IAEIEKWVV LR+
Sbjct: 210 WTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVALRE 269

Query: 342 LVNKFDSKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGF 401
           LVNKFDSKSSCCDSINIVLIYLYGKWGM+EKSEEKFNEI+DK+SVLVWNSMINAYFQNGF
Sbjct: 270 LVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQNGF 329

Query: 402 PVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNK 461
           PVEAL LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIASNK
Sbjct: 330 PVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIASNK 389

Query: 462 MLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFSQMQEV 521
           MLATALID+YCK GSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLF+QMQE+
Sbjct: 390 MLATALIDLYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEI 449

Query: 522 DIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEHYACYIDLLARAGHFED 581
           DIRP+TGTFIGLLSACSHSGFLEQG QIFIEMTT+YL+ PSLEHYACYIDLLARAG FED
Sbjct: 450 DIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRFED 509

Query: 582 ALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFAT 641
           ALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSFA+
Sbjct: 510 ALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSFAS 569

Query: 642 DLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQ 701
           D QWDDVSALRWFMREKG+ KQPGQSWISIDG VHEFFSATKSHPYVDLLY+TLN L+KQ
Sbjct: 570 DRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELDKQ 629

Query: 702 MKLVIP 708
            KLVIP
Sbjct: 630 TKLVIP 635

[Close]

BLAST of CcUC06G113550 vs. ExPASy TrEMBL
Match: A0A0A0K4I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071580 PE=4 SV=1)

HSP 1 Score: 1117.8 bits (2890), Expect = 0.0e+00
Identity = 546/600 (91.00%), Postives = 572/600 (95.33%), Query Frame = 0


Query: 108 MRSLCVYPESINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 167
           MR LCV PE I+LSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV
Sbjct: 1   MRCLCVNPEFISLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 60

Query: 168 FNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHA 227
           FNQLIRPNIFPCNAIIRVLAEHNSSF A SIFK LKH SLSPNDFTFSFLLKAFHRS +A
Sbjct: 61  FNQLIRPNIFPCNAIIRVLAEHNSSFFALSIFKYLKHLSLSPNDFTFSFLLKAFHRSCNA 120

Query: 228 LNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKVFDEMSDRDMACCWTSLIA 287
           LN+KQVHTHVLKMGY GDSFISN+LL VYARGLK+MASAHK+FDEMSDR+MACCWTSLIA
Sbjct: 121 LNVKQVHTHVLKMGYFGDSFISNSLLGVYARGLKEMASAHKLFDEMSDREMACCWTSLIA 180

Query: 288 GYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRQLVNKFD 347
           GYAQMGLAEKA+LLF MM+KEN+QPEDDT+VSVLSACSK  IAEIEKWVVELRQLVNK D
Sbjct: 181 GYAQMGLAEKAMLLFFMMVKENIQPEDDTIVSVLSACSKLQIAEIEKWVVELRQLVNKCD 240

Query: 348 SKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGFPVEALA 407
           SK SCCDSINIVLIYLYGKWGM+EKSEEKFNE+VDKRSVLVWNSMINAYFQNGFPVEAL 
Sbjct: 241 SKRSCCDSINIVLIYLYGKWGMVEKSEEKFNEVVDKRSVLVWNSMINAYFQNGFPVEALT 300

Query: 408 LFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNKMLATAL 467
           LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+ GGR+GIIASNKMLAT+L
Sbjct: 301 LFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRGGRKGIIASNKMLATSL 360

Query: 468 IDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFSQMQEVDIRPTT 527
           IDMYCK GSLERAKEVFHQLINKDVI+FNAMIMGLAVN KGDEALKLF+QMQE++I P+T
Sbjct: 361 IDMYCKCGSLERAKEVFHQLINKDVITFNAMIMGLAVNSKGDEALKLFAQMQEINIIPST 420

Query: 528 GTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEHYACYIDLLARAGHFEDALEVVS 587
           GTFIGLLSACSHSGFLEQGRQIFIEMTT YLV PSLEHYACYIDLLARAGHF+DALEV+S
Sbjct: 421 GTFIGLLSACSHSGFLEQGRQIFIEMTTHYLVSPSLEHYACYIDLLARAGHFDDALEVIS 480

Query: 588 TMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 647
           TMPFEPNNFVWSSLLRGCLLHS+FELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD
Sbjct: 481 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 540

Query: 648 VSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQMKLVIP 707
           VSALRWFMREKG+ KQPGQSWISIDG VHEFFSATKSHPYVDLLY TLN LEKQMKLVIP
Sbjct: 541 VSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYTTLNELEKQMKLVIP 600

[Close]

BLAST of CcUC06G113550 vs. ExPASy TrEMBL
Match: A0A6J1GKT0 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454858 PE=4 SV=1)

HSP 1 Score: 1067.8 bits (2760), Expect = 2.0e-308
Identity = 531/606 (87.62%), Postives = 561/606 (92.57%), Query Frame = 0


Query: 102 NGKSSAMRSLCVYPESINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 161
           NGKS AMRS C+  E INLSDLLQGRIN+S LRQIH RVFRLLKHQDNLIATRLIGHYP+
Sbjct: 3   NGKSYAMRSSCINLEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPY 62

Query: 162 SVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAF 221
           SVG+RVFNQL+RPNIFPCNAIIRVLAE N SFLAFSIFKSLK  SLSPNDFTFSFLLKAF
Sbjct: 63  SVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAF 122

Query: 222 HRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKVFDEMSDRDMACC 281
           HRSSH+ N+KQVHTHV+KMGYLGDSFISNALL VYARGLKDM SAH +FDEMS+R+MACC
Sbjct: 123 HRSSHSPNVKQVHTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACC 182

Query: 282 WTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRQ 341
           WTSLIAGYA MGLAEKALLLFVMMIKEN+QPEDDTMVSVLSACSK  IAEIEKWV EL Q
Sbjct: 183 WTSLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQ 242

Query: 342 LVNKFDSKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGF 401
           LVN+FD   SCCDSINIVL+YLYGKWG IEKSEEKFNEIVDKRS +VWNSMINAYFQNG 
Sbjct: 243 LVNEFD---SCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGC 302

Query: 402 PVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNK 461
           PVEAL LFRLM+EN HCKPNHVTMVTVLSACAQIGDLQLG  VHE LE GGRRGIIASNK
Sbjct: 303 PVEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNK 362

Query: 462 MLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFSQMQEV 521
           MLATALIDMYCKSGSLE+AK+VFH+LI KDVISFNAMIMGLAVNGK DEALKLFSQMQE 
Sbjct: 363 MLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQES 422

Query: 522 DIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEHYACYIDLLARAGHFED 581
           DI+PTTGTFIGLLSACSHSGFLEQGRQIFI+M TRY   PSL+HYACYIDLLARAG  ED
Sbjct: 423 DIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVED 482

Query: 582 ALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFAT 641
           ALEVVSTMPFEPNNFVWSSLLRGCLLHS+FELA+YVSKKLVEVDPE+SAGYVMQANSFAT
Sbjct: 483 ALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFAT 542

Query: 642 DLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQ 701
           DLQWDDVSALRWFMREKG+ KQPG+SWISIDG VHEFFSATKSHP VDLLY+TL+ LE+Q
Sbjct: 543 DLQWDDVSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHPCVDLLYSTLSELERQ 602

Query: 702 MKLVIP 708
           MKLVIP
Sbjct: 603 MKLVIP 605

[Close]

BLAST of CcUC06G113550 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 369.8 bits (948), Expect = 5.0e-102
Identity = 212/606 (34.98%), Postives = 338/606 (55.78%), Query Frame = 0


Query: 133 LRQIHARVFRLLKHQDNLIATRLIGH---YPHSVGL----RVFNQLIRPNIFPCNAIIRV 192
           LR IHA++ ++  H  N   ++LI      PH  GL     VF  +  PN+   N + R 
Sbjct: 49  LRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG 108

Query: 193 LAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHTHVLKMGYLGD 252
            A  +    A  ++  +    L PN +TF F+LK+  +S      +Q+H HVLK+G   D
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168

Query: 253 SFISNALLAVYARGLKDMASAHKVFDEMSDRDM--------------------------- 312
            ++  +L+++Y +  + +  AHKVFD+   RD+                           
Sbjct: 169 LYVHTSLISMYVQNGR-LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 228

Query: 313 ---ACCWTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKW 372
                 W ++I+GYA+ G  ++AL LF  M+K N++P++ TMV+V+SAC+       +  
Sbjct: 229 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA-------QSG 288

Query: 373 VVELRQLVNKFDSKSSCCDSINIV--LIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMI 432
            +EL + V+ +        ++ IV  LI LY K G +E +   F E +  + V+ WN++I
Sbjct: 289 SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF-ERLPYKDVISWNTLI 348

Query: 433 NAYFQNGFPVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGR 492
             Y       EAL LF+ M+ +    PN VTM+++L ACA +G + +G W+H  ++   R
Sbjct: 349 GGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYID--KR 408

Query: 493 RGIIASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALK 552
              + +   L T+LIDMY K G +E A +VF+ +++K + S+NAMI G A++G+ D +  
Sbjct: 409 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 468

Query: 553 LFSQMQEVDIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEHYACYIDLL 612
           LFS+M+++ I+P   TF+GLLSACSHSG L+ GR IF  MT  Y + P LEHY C IDLL
Sbjct: 469 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 528

Query: 613 ARAGHFEDALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYV 672
             +G F++A E+++ M  EP+  +W SLL+ C +H   EL +  ++ L++++PEN   YV
Sbjct: 529 GHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 588

Query: 673 MQANSFATDLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYN 700
           + +N +A+  +W++V+  R  + +KG++K PG S I ID +VHEF    K HP    +Y 
Sbjct: 589 LLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 642

[Close]

BLAST of CcUC06G113550 vs. TAIR 10
Match: AT3G08820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 351.7 bits (901), Expect = 1.4e-96
Identity = 200/585 (34.19%), Postives = 321/585 (54.87%), Query Frame = 0


Query: 131 SHLRQIHARVFRLLKHQD----NLIATRLIGHYPHSVGLRVFNQLIRPNIFPCNAIIRVL 190
           +HL+QIH  +     H D    NL+  R +          +F+    PNIF  N++I   
Sbjct: 27  NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86

Query: 191 AEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHTHVLKMGYLGDS 250
             ++       +F S++   L  + FTF  +LKA  R+S       +H+ V+K G+  D 
Sbjct: 87  VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146

Query: 251 FISNALLAVYARGLKDMASAHKVFDEMSDRDMACCWTSLIAGYAQMGLAEKALLLFVMMI 310
               +LL++Y+ G   +  AHK+FDE+ DR +   WT+L +GY   G   +A+ LF  M+
Sbjct: 147 AAMTSLLSIYS-GSGRLNDAHKLFDEIPDRSVV-TWTALFSGYTTSGRHREAIDLFKKMV 206

Query: 311 KENMQPEDDTMVSVLSACSKFHIAEIE--KWVV----ELRQLVNKFDSKSSCCDSINIVL 370
           +  ++P+   +V VLSAC   H+ +++  +W+V    E+    N F         +   L
Sbjct: 207 EMGVKPDSYFIVQVLSAC--VHVGDLDSGEWIVKYMEEMEMQKNSF---------VRTTL 266

Query: 371 IYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGFPVEALALFRLMVENSHCKP 430
           + LY K G +EK+   F+ +V+K  ++ W++MI  Y  N FP E + LF  M++  + KP
Sbjct: 267 VNLYAKCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQ-ENLKP 326

Query: 431 NHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNKMLATALIDMYCKSGSLERA 490
           +  ++V  LS+CA +G L LG W   +++    R    +N  +A ALIDMY K G++ R 
Sbjct: 327 DQFSIVGFLSSCASLGALDLGEWGISLID----RHEFLTNLFMANALIDMYAKCGAMARG 386

Query: 491 KEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFSQMQEVDIRPTTGTFIGLLSACSHS 550
            EVF ++  KD++  NA I GLA NG    +  +F Q +++ I P   TF+GLL  C H+
Sbjct: 387 FEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHA 446

Query: 551 GFLEQGRQIFIEMTTRYLVLPSLEHYACYIDLLARAGHFEDALEVVSTMPFEPNNFVWSS 610
           G ++ G + F  ++  Y +  ++EHY C +DL  RAG  +DA  ++  MP  PN  VW +
Sbjct: 447 GLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGA 506

Query: 611 LLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDDVSALRWFMREKGI 670
           LL GC L    +LA+ V K+L+ ++P N+  YV  +N ++   +WD+ + +R  M +KG+
Sbjct: 507 LLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGM 566

Query: 671 RKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQMKLV 706
           +K PG SWI ++G VHEF +  KSHP  D +Y  L  L  +M+L+
Sbjct: 567 KKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLM 592

[Close]

BLAST of CcUC06G113550 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 349.0 bits (894), Expect = 9.1e-96
Identity = 199/618 (32.20%), Postives = 335/618 (54.21%), Query Frame = 0


Query: 123 LLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHS------VGLRVFNQLIRPNI 182
           L++  ++   L+Q H  + R     D   A++L      S         +VF+++ +PN 
Sbjct: 36  LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95

Query: 183 FPCNAIIRVLAEHNSSFLAFSIFKSL-KHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHT 242
           F  N +IR  A      L+   F  +       PN +TF FL+KA    S     + +H 
Sbjct: 96  FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155

Query: 243 HVLKMGYLGDSFISNALLAVYARGLKDMASAHKVFDEMSDRDMACCWTSLIAGYAQMGLA 302
             +K     D F++N+L+  Y     D+ SA KVF  + ++D+   W S+I G+ Q G  
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEKDVV-SWNSMINGFVQKGSP 215

Query: 303 EKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRQLVNKFDSKSSCCDS 362
           +KAL LF  M  E+++    TMV VLSAC+K    E  + V    +     +++ +   +
Sbjct: 216 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE-----ENRVNVNLT 275

Query: 363 INIVLIYLYGKWGMIEKSEEKFNEIVDK------------------------------RS 422
           +   ++ +Y K G IE ++  F+ + +K                              + 
Sbjct: 276 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 335

Query: 423 VLVWNSMINAYFQNGFPVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVH 482
           ++ WN++I+AY QNG P EAL +F  +    + K N +T+V+ LSACAQ+G L+LG W+H
Sbjct: 336 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 395

Query: 483 EVLECGGRRGIIASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVN 542
             ++  G    I  N  + +ALI MY K G LE+++EVF+ +  +DV  ++AMI GLA++
Sbjct: 396 SYIKKHG----IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMH 455

Query: 543 GKGDEALKLFSQMQEVDIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEH 602
           G G+EA+ +F +MQE +++P   TF  +  ACSH+G +++   +F +M + Y ++P  +H
Sbjct: 456 GCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH 515

Query: 603 YACYIDLLARAGHFEDALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVD 662
           YAC +D+L R+G+ E A++ +  MP  P+  VW +LL  C +H+   LA+    +L+E++
Sbjct: 516 YACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELE 575

Query: 663 PENSAGYVMQANSFATDLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSH 704
           P N   +V+ +N +A   +W++VS LR  MR  G++K+PG S I IDG++HEF S   +H
Sbjct: 576 PRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAH 635

[Close]

BLAST of CcUC06G113550 vs. TAIR 10
Match: AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 337.0 bits (863), Expect = 3.6e-92
Identity = 192/576 (33.33%), Postives = 324/576 (56.25%), Query Frame = 0


Query: 129 NNSHLRQIHARVFRLLKHQDNLIATRLIGHY----PHSVGLRVFNQLIRPNIFPCNAIIR 188
           N + ++Q+HA++ R   H+D  IA +LI         ++ +RVFNQ+  PN+  CN++IR
Sbjct: 31  NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90

Query: 189 VLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHTHVLKMGYLG 248
             A+++  + AF +F  ++ F L  ++FT+ FLLKA    S    +K +H H+ K+G   
Sbjct: 91  AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150

Query: 249 DSFISNALLAVYAR-GLKDMASAHKVFDEMSDRDMACCWTSLIAGYAQMGLAEKALLLFV 308
           D ++ NAL+  Y+R G   +  A K+F++MS+RD    W S++ G  + G    A  LF 
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD-TVSWNSMLGGLVKAGELRDARRLFD 210

Query: 309 MMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRQLVNKFDSKSSCCDSINIVLIYL 368
            M + ++    +TM+   + C +   A          +L  K   +++   S    ++  
Sbjct: 211 EMPQRDL-ISWNTMLDGYARCREMSKA---------FELFEKMPERNTVSWS---TMVMG 270

Query: 369 YGKWGMIEKSEEKFNEI-VDKRSVLVWNSMINAYFQNGFPVEALALFRLMVENSHCKPNH 428
           Y K G +E +   F+++ +  ++V+ W  +I  Y + G   EA  L   MV  S  K + 
Sbjct: 271 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA-SGLKFDA 330

Query: 429 VTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNKMLATALIDMYCKSGSLERAKE 488
             ++++L+AC + G L LG  +H +L    +R  + SN  +  AL+DMY K G+L++A +
Sbjct: 331 AAVISILAACTESGLLSLGMRIHSIL----KRSNLGSNAYVLNALLDMYAKCGNLKKAFD 390

Query: 489 VFHQLINKDVISFNAMIMGLAVNGKGDEALKLFSQMQEVDIRPTTGTFIGLLSACSHSGF 548
           VF+ +  KD++S+N M+ GL V+G G EA++LFS+M+   IRP   TFI +L +C+H+G 
Sbjct: 391 VFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGL 450

Query: 549 LEQGRQIFIEMTTRYLVLPSLEHYACYIDLLARAGHFEDALEVVSTMPFEPNNFVWSSLL 608
           +++G   F  M   Y ++P +EHY C +DLL R G  ++A++VV TMP EPN  +W +LL
Sbjct: 451 IDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALL 510

Query: 609 RGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDDVSALRWFMREKGIRK 668
             C +H++ ++A+ V   LV++DP +   Y + +N +A    W+ V+ +R  M+  G+ K
Sbjct: 511 GACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEK 570

Query: 669 QPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVL 699
             G S + ++  +HEF    KSHP  D +Y  L  L
Sbjct: 571 PSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587

[Close]

BLAST of CcUC06G113550 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 335.1 bits (858), Expect = 1.4e-91
Identity = 204/612 (33.33%), Postives = 340/612 (55.56%), Query Frame = 0


Query: 104 KSSAMRSLCVYPESINLSD-----LLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGH 163
           ++S + S  +Y  S   SD     L+    + + L+QIHAR+  L       + T+LI H
Sbjct: 3   EASCLASPLLYTNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI-H 62

Query: 164 YPHSVG-----LRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFT 223
              S G      +VF+ L RP IFP NAIIR  + +N    A  ++ +++   +SP+ FT
Sbjct: 63  ASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFT 122

Query: 224 FSFLLKAFHRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKVFD-- 283
           F  LLKA    SH    + VH  V ++G+  D F+ N L+A+YA+  + + SA  VF+  
Sbjct: 123 FPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAK-CRRLGSARTVFEGL 182

Query: 284 EMSDRDMACCWTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAE 343
            + +R +   WT++++ YAQ G   +AL +F  M K +++P+   +VSVL+A   F   +
Sbjct: 183 PLPERTIV-SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA---FTCLQ 242

Query: 344 IEKWVVELRQLVNKFDSKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNS 403
             K    +   V K   +      + I L  +Y K G +  ++  F++ +   ++++WN+
Sbjct: 243 DLKQGRSIHASVVKMGLEIE--PDLLISLNTMYAKCGQVATAKILFDK-MKSPNLILWNA 302

Query: 404 MINAYFQNGFPVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECG 463
           MI+ Y +NG+  EA+ +F  M+ N   +P+ +++ + +SACAQ+G L+    ++E +   
Sbjct: 303 MISGYAKNGYAREAIDMFHEMI-NKDVRPDTISITSAISACAQVGSLEQARSMYEYV--- 362

Query: 464 GRRGIIASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEA 523
             R     +  +++ALIDM+ K GS+E A+ VF + +++DV+ ++AMI+G  ++G+  EA
Sbjct: 363 -GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 422

Query: 524 LKLFSQMQEVDIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLVLPSLEHYACYID 583
           + L+  M+   + P   TF+GLL AC+HSG + +G   F  M   + + P  +HYAC ID
Sbjct: 423 ISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVID 482

Query: 584 LLARAGHFEDALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAG 643
           LL RAGH + A EV+  MP +P   VW +LL  C  H   EL +Y +++L  +DP N+  
Sbjct: 483 LLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGH 542

Query: 644 YVMQANSFATDLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLL 703
           YV  +N +A    WD V+ +R  M+EKG+ K  G SW+ + G +  F    KSHP  + +
Sbjct: 543 YVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 599

The following BLAST results are available for this feature:

BLAST of CcUC06G113550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888799.1	0.0e+00	92.62	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benin...	[more]
TYK06804.1	0.0e+00	91.42	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008455016.1	0.0e+00	91.42	PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-...	[more]
KAA0031351.1	0.0e+00	91.25	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_031744265.1	0.0e+00	91.00	pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 ...	[more]

BLAST of CcUC06G113550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LN01	7.0e-101	34.98	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9SR82	2.0e-95	34.19	Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis th...	[more]
O82380	1.3e-94	32.20	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9LS72	5.0e-91	33.33	Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX...	[more]
Q9LTV8	1.9e-90	33.33	Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX...	[more]

BLAST of CcUC06G113550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C6A4	0.0e+00	91.42	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BZG8	0.0e+00	91.42	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor...	[more]
A0A5A7SP64	0.0e+00	91.25	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0K4I3	0.0e+00	91.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071580 PE=4 SV=1	[more]
A0A6J1GKT0	2.0e-308	87.62	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor...	[more]

BLAST of CcUC06G113550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08070.1	5.0e-102	34.98	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G08820.1	1.4e-96	34.19	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G29760.1	9.1e-96	32.20	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G29230.1	3.6e-92	33.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G12770.1	1.4e-91	33.33	mitochondrial editing factor 22	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 360..383 e-value: 0.66 score: 10.4 coord: 281..309 e-value: 9.8E-6 score: 25.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 490..538 e-value: 6.8E-10 score: 39.0 coord: 385..433 e-value: 7.6E-9 score: 35.6 coord: 174..222 e-value: 2.6E-7 score: 30.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 465..491 e-value: 1.8E-4 score: 19.4 coord: 388..421 e-value: 6.3E-8 score: 30.3 coord: 281..312 e-value: 3.2E-5 score: 21.8 coord: 493..526 e-value: 5.6E-7 score: 27.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 491..525 score: 12.002681
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 385..419 score: 9.930995
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 278..312 score: 9.536388
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 460..490 score: 8.659485
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 235..355 e-value: 5.3E-16 score: 60.9 coord: 459..685 e-value: 1.1E-37 score: 132.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 356..451 e-value: 1.8E-10 score: 42.6 coord: 114..234 e-value: 3.6E-5 score: 25.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 456..630
None	No IPR available	PANTHER	PTHR47925:SF67	SUBFAMILY NOT NAMED	coord: 124..704
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 124..704

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G113550.1	CcUC06G113550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
biological_process	GO:0016556	mRNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding