CcUC05G107550 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G107550
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	U4/U6 small nuclear ribonucleoprotein Prp31 homolog
Location	CicolChr05: 34538831 .. 34542394 (+)
RNA-Seq Expression	CcUC05G107550
Synteny	CcUC05G107550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTGTCGATTGGTGGCTGGACCATCGGCGAAGAAAGACGGCCGTTCAATTCATTTGTTCTCTCTTCTTCCTCTGTTCTTCACTATTTCCGTCGACCACGAGCCACCGCCAGGTTTTCCCGCTCGTTCGTCGGCGTTCTTTCTTCTCGTTTTTAGTGTGAAAACTCGTCTGCCGTACTTCGATTCCCTTTCTGGAAAAATTTGGAGAACATAGTTTGATCTGAGGTTAGGGATTTCCTTTTGTGTAAAAGCAATTGAGTGTGGTTTTATCCATTTAGGTTTATATATATGTATCTTACCCTTAACCCTGGGAATTGAAATTTTGATATTCAGCTATTCTTCAACTTGGTGCTGAATTGTTTACGACCAGGGAGGTTTTGTAAATCTTCTAGCGCAGCTTAGAAAATGGTTAGTAACTTTTTTTCTTTTTTCTGCTTTTGCTTGCATCCATGTTACGCTTAGGTTTCAGAACTTTCTTGTATGCTGGGTTAGTTTAGTTGGCATGTTTATTTATTTCATACTTTCATTAGGCTTTTCAACTTGGTATGGTGCTTCTTCTTTCGAATGTTTGTTTGAATCTATCTTGAAATTGTGATTTATCTTGTTTATTAGTTTTCAGTTTCTTTTCTTGGGTTTTGTAGGCTACTTTGGCTGATTCTTTTCTAGCAGATCTAGATGAACTCTCTGATGAAGACAAATTTCAGGTTAGTAAATGGTTTTTACTTCTCCGTAGAAATGAAGTCATAATTATTTGGTTGGTAGTAGTGTGAATTTATCTACCTTATATTTTGAGGCAATAGTTACTGGATGTTTACAGGCTGAACAAGATGCCGATGCTGAAAATATGGAAGAGGATATTGATGGGGACCTTGCGGACCTAGAAAGCCTAAATTATGATGATCTGGACAGTGTATCAAAATTGCAGAAAACACAAAGATACAATGATATTATGCAAGTAAGTTCATATGAAAGTTTCCTTATTGACCTTGGTGTGGCTTGAGCAGAAAGGGATTAAAAGAGAGCCAATTAATACATTTGTCCTTGCTTTCTTGTCTATTATTCTATCCTTTTAGTGGATGACAAGTTCTGGGTTACTGTATAATTATTGGATTTCTTCCAATTCATCTCCCCCCTGGATAAACTTAGATTTGCAGATTTTGAAAATATATTGAAGTTATGACGCATTTCTATTTTACTATTGAAAATCACGATGTTCTTACAACCACAACTCCTCTCCTCTAAATGTTTAATATTTTTAGTGTTCATAAATGATGTCGCTATACTTTCCCCTTTTCCCATCTGTGCGGAGGTAATTTTGATGGGATTTGTTGGCATCTAAATTACAGAAAGTGGAAGATGCATTGGAGACAGATTCTAATATCTCAAGTCAGGGATTTGTATTGGAAGATGATCCTGAGTACCAATTGATTGTAGAGTGTAACGCCTTGTCAGTGGATATTGAGAATGAAATTATTATTATTCACAATTTTATACGTGATAAATATCGACTGAAATTTCCAGAGCTTGAATCACTTGTGCACCATCCAATTGATTATGCTCGAGTTGTTAAGAAGATTGGGAATGAAATGGATTTGACTCTTGTAGATTTAGAAGGGCTTTTACCCTCTGCTGTCATTATGGTTGTCTCTGTTACAGCATCTACCACAAGTGGAAAGCCACTTCCAGAGGAAATTCTCCAGAAAACAATGGATGCATGTGATCGAGCTCTTGCTTTAGATTCGGCAAAGAAAATGGTCCTTAATTTTGTTGAAAGTAGAATGGGATACATTGCACCAAATCTCTCAGCGATAGTTGGAAGTGCTGTTGCAGCAAAACTAATGGGAACTGCTGGTGGTCTTGCTGCTTTGGCTAAGATGCCTGCTTGCAATGTTCAGCTTCTCGGTGCAAAGAAAAAAAATCTGGCTGGGTTTTCGACAGCGACCTCACAATTTCGAGTAGGTTATATTGAGCAAACGGAGATATTCCAATCAACACCTCCTCCTTTGAAGATGCGTGCTTGTCGGCTCATAGCTGCAAAGTCAACACTTGCAGCACGAGTTGACTCTACCAGGGGGGATCCTACTGGGAAGACTGGTAGAGTCTTCAAAGATGAGATCCTTAAGAAAATTGAGAAGTGGCAAGAGCCTCCACCTGCAAAACAACCAAAACCTCTTCCAGTCCCTGATTCTGAGCCCAAAAAGAAGAGAGGTGGCCGCCGATTAAGGAAGATGAAGGAAAGGTACTGTTATGGTACTTTTGTCTTTCATCTCCCTAACAGTAGAACTTAGAAGTTCTGATCTGTTGCACTTTTTGTTTATTCATAGATTGATATGGTTTTCCTTGTCAGATATGCAACGACGGAGATGAGGAAGCTAGCTAACAGGATGCAGTTTGGGGTGCCTGAAGAGAGTTCTTTAGGTAAACCATTCTTTCATTTCTGAATAATCTGGATTGTTTGGATTGGTAGTCTTGCTTCTGCTACGTTTCATGTTACACATTGCAATGAGATGCAATGTCATGCTGTTCAATAAGCTTAAGTTGTCACGTTCAGTCTTGAGTCTGACCTCTTTCAGGAATGTTTCATATCATAAGTAGTTGCATTTTCTTCCGAATATCAGCTGTTTTTGAAAATTGTTCTGAATGGAAAAAAAAAAAAAAAAAAAGAAAAATAGTGGTTTGAAGCATTCTACAGTAGTGTTCTAAATAAAGACCTCTCTCGCTCTCTCTTTTTGTCTTTTGTTTTTCTATTTTTTAAGATTCTGTATAAAAATATTCTTAATAAATATTTCACAATTTTCCCCCTTATGCGACAACAGGAGATGGATTGGGGGAAGGGTATGGAATGCTTGGTCAGGCTGGGAGTGGCAAGTTGCGTGTGTCGGCTGCTCAGAGCAAGCTTGCTGCAAAAGTTGTTAAGAAGTAAGTCAAGTCATTGAGCTGATCCTAGTAATAATTATTATTACAAAGGGAAAAAGGATATTTGTAGCCTTTCATTCGCTTCTTTGTCTGTTCTCTTTTACTTATCTTCTTAAATTAACGTTTAGGTTCAAGGAAAAACGCTATGGAAGCAGTGGTGCCACATCTGGGCTGACCTCAAGTTTGGCATTTACTCCTGTACAAGTCAGTAATCTCTTTTTCTCCTATGTTATCTAAATTTTCCTCGCAAGTAATTGTTTTTGTCATGACACGGCCTGGGTGCTTAATATTAAGGTTATGAGAATTTCTTGTTCTCCTTGCAGGGAATTGAGCTGTCGAATCCTCAGGCCCATTTGAACCAGCTAGGCAGTGGAACTCAAAGCACCTACTTTTCGGAAACAGGAACATTTTCAAAGATTAGGAAAAACTGAGTCATTAGACCATCAAGCTTTATGTTTCATGCTCATGCTGTAACCATACATGAATATGGCTACGATTATGCTTTGTAATTCAGTACTAAGAGAGCCACAGGAATTTTTGTTTCTATAATGCAAAGGTTTTCCTTTTCTGCCCCTTAGTTTTGAATGTTTTGATTATGCTTTATCATTTCAAGGCTTTTGTTGACTAGTGGTGATTATTAGCCTTTTC

mRNA sequence

GTTTTGTCGATTGGTGGCTGGACCATCGGCGAAGAAAGACGGCCGTTCAATTCATTTGTTCTCTCTTCTTCCTCTGTTCTTCACTATTTCCGTCGACCACGAGCCACCGCCAGGTTTTCCCGCTCGTTCGTCGGCGTTCTTTCTTCTCGTTTTTAGTGTGAAAACTCGTCTGCCGTACTTCGATTCCCTTTCTGGAAAAATTTGGAGAACATAGTTTGATCTGAGCTATTCTTCAACTTGGTGCTGAATTGTTTACGACCAGGGAGGTTTTGTAAATCTTCTAGCGCAGCTTAGAAAATGGCTACTTTGGCTGATTCTTTTCTAGCAGATCTAGATGAACTCTCTGATGAAGACAAATTTCAGGCTGAACAAGATGCCGATGCTGAAAATATGGAAGAGGATATTGATGGGGACCTTGCGGACCTAGAAAGCCTAAATTATGATGATCTGGACAGTGTATCAAAATTGCAGAAAACACAAAGATACAATGATATTATGCAAAAAGTGGAAGATGCATTGGAGACAGATTCTAATATCTCAAGTCAGGGATTTGTATTGGAAGATGATCCTGAGTACCAATTGATTGTAGAGTGTAACGCCTTGTCAGTGGATATTGAGAATGAAATTATTATTATTCACAATTTTATACGTGATAAATATCGACTGAAATTTCCAGAGCTTGAATCACTTGTGCACCATCCAATTGATTATGCTCGAGTTGTTAAGAAGATTGGGAATGAAATGGATTTGACTCTTGTAGATTTAGAAGGGCTTTTACCCTCTGCTGTCATTATGGTTGTCTCTGTTACAGCATCTACCACAAGTGGAAAGCCACTTCCAGAGGAAATTCTCCAGAAAACAATGGATGCATGTGATCGAGCTCTTGCTTTAGATTCGGCAAAGAAAATGGTCCTTAATTTTGTTGAAAGTAGAATGGGATACATTGCACCAAATCTCTCAGCGATAGTTGGAAGTGCTGTTGCAGCAAAACTAATGGGAACTGCTGGTGGTCTTGCTGCTTTGGCTAAGATGCCTGCTTGCAATGTTCAGCTTCTCGGTGCAAAGAAAAAAAATCTGGCTGGGTTTTCGACAGCGACCTCACAATTTCGAGTAGGTTATATTGAGCAAACGGAGATATTCCAATCAACACCTCCTCCTTTGAAGATGCGTGCTTGTCGGCTCATAGCTGCAAAGTCAACACTTGCAGCACGAGTTGACTCTACCAGGGGGGATCCTACTGGGAAGACTGGTAGAGTCTTCAAAGATGAGATCCTTAAGAAAATTGAGAAGTGGCAAGAGCCTCCACCTGCAAAACAACCAAAACCTCTTCCAGTCCCTGATTCTGAGCCCAAAAAGAAGAGAGGTGGCCGCCGATTAAGGAAGATGAAGGAAAGATATGCAACGACGGAGATGAGGAAGCTAGCTAACAGGATGCAGTTTGGGGTGCCTGAAGAGAGTTCTTTAGGAGATGGATTGGGGGAAGGGTATGGAATGCTTGGTCAGGCTGGGAGTGGCAAGTTGCGTGTGTCGGCTGCTCAGAGCAAGCTTGCTGCAAAAGTTGTTAAGAAGTTCAAGGAAAAACGCTATGGAAGCAGTGGTGCCACATCTGGGCTGACCTCAAGTTTGGCATTTACTCCTGTACAAGGAATTGAGCTGTCGAATCCTCAGGCCCATTTGAACCAGCTAGGCAGTGGAACTCAAAGCACCTACTTTTCGGAAACAGGAACATTTTCAAAGATTAGGAAAAACTGAGTCATTAGACCATCAAGCTTTATGTTTCATGCTCATGCTGTAACCATACATGAATATGGCTACGATTATGCTTTGTAATTCAGTACTAAGAGAGCCACAGGAATTTTTGTTTCTATAATGCAAAGGTTTTCCTTTTCTGCCCCTTAGTTTTGAATGTTTTGATTATGCTTTATCATTTCAAGGCTTTTGTTGACTAGTGGTGATTATTAGCCTTTTC

Coding sequence (CDS)

ATGGCTACTTTGGCTGATTCTTTTCTAGCAGATCTAGATGAACTCTCTGATGAAGACAAATTTCAGGCTGAACAAGATGCCGATGCTGAAAATATGGAAGAGGATATTGATGGGGACCTTGCGGACCTAGAAAGCCTAAATTATGATGATCTGGACAGTGTATCAAAATTGCAGAAAACACAAAGATACAATGATATTATGCAAAAAGTGGAAGATGCATTGGAGACAGATTCTAATATCTCAAGTCAGGGATTTGTATTGGAAGATGATCCTGAGTACCAATTGATTGTAGAGTGTAACGCCTTGTCAGTGGATATTGAGAATGAAATTATTATTATTCACAATTTTATACGTGATAAATATCGACTGAAATTTCCAGAGCTTGAATCACTTGTGCACCATCCAATTGATTATGCTCGAGTTGTTAAGAAGATTGGGAATGAAATGGATTTGACTCTTGTAGATTTAGAAGGGCTTTTACCCTCTGCTGTCATTATGGTTGTCTCTGTTACAGCATCTACCACAAGTGGAAAGCCACTTCCAGAGGAAATTCTCCAGAAAACAATGGATGCATGTGATCGAGCTCTTGCTTTAGATTCGGCAAAGAAAATGGTCCTTAATTTTGTTGAAAGTAGAATGGGATACATTGCACCAAATCTCTCAGCGATAGTTGGAAGTGCTGTTGCAGCAAAACTAATGGGAACTGCTGGTGGTCTTGCTGCTTTGGCTAAGATGCCTGCTTGCAATGTTCAGCTTCTCGGTGCAAAGAAAAAAAATCTGGCTGGGTTTTCGACAGCGACCTCACAATTTCGAGTAGGTTATATTGAGCAAACGGAGATATTCCAATCAACACCTCCTCCTTTGAAGATGCGTGCTTGTCGGCTCATAGCTGCAAAGTCAACACTTGCAGCACGAGTTGACTCTACCAGGGGGGATCCTACTGGGAAGACTGGTAGAGTCTTCAAAGATGAGATCCTTAAGAAAATTGAGAAGTGGCAAGAGCCTCCACCTGCAAAACAACCAAAACCTCTTCCAGTCCCTGATTCTGAGCCCAAAAAGAAGAGAGGTGGCCGCCGATTAAGGAAGATGAAGGAAAGATATGCAACGACGGAGATGAGGAAGCTAGCTAACAGGATGCAGTTTGGGGTGCCTGAAGAGAGTTCTTTAGGAGATGGATTGGGGGAAGGGTATGGAATGCTTGGTCAGGCTGGGAGTGGCAAGTTGCGTGTGTCGGCTGCTCAGAGCAAGCTTGCTGCAAAAGTTGTTAAGAAGTTCAAGGAAAAACGCTATGGAAGCAGTGGTGCCACATCTGGGCTGACCTCAAGTTTGGCATTTACTCCTGTACAAGGAATTGAGCTGTCGAATCCTCAGGCCCATTTGAACCAGCTAGGCAGTGGAACTCAAAGCACCTACTTTTCGGAAACAGGAACATTTTCAAAGATTAGGAAAAACTGA

Protein sequence

MATLADSFLADLDELSDEDKFQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKTQRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLAALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKSTLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSKIRKN

Homology

[Close]

BLAST of CcUC05G107550 vs. NCBI nr
Match: XP_038892283.1 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 889.0 bits (2296), Expect = 1.8e-254
Identity = 472/484 (97.52%), Postives = 480/484 (99.17%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDED F A++DADAENMEEDIDGDLADLESLNYDDLDSVSKLQ+T
Sbjct: 1   MATLADSFLADLDELSDEDNFVAKEDADAENMEEDIDGDLADLESLNYDDLDSVSKLQQT 60

Query: 61  QRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKVEDAL TDSNIS+QGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEDALRTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240
           P+EILQKT+DACDRALALDSAKKMVLNFVESRMG+IAPNLSAIVGSAVAAKLMGTAGGLA
Sbjct: 181 PDEILQKTIDACDRALALDSAKKMVLNFVESRMGFIAPNLSAIVGSAVAAKLMGTAGGLA 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLI+AKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300

Query: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDSTRGDPTGKTGR FKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRAFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of CcUC05G107550 vs. NCBI nr
Match: XP_022956658.1 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucurbita moschata] >XP_023004221.1 U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucurbita maxima] >XP_023526610.1 U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucurbita pepo subsp. pepo] >KAG6601489.1 U4/U6 small nuclear ribonucleoprotein Prp31-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 887.5 bits (2292), Expect = 5.2e-254
Identity = 472/484 (97.52%), Postives = 476/484 (98.35%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDED F  E+DADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDNFLDEEDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKV DALE DSN+S+QGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVADALEMDSNVSNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240
           PEEILQKT+DACDRAL LDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEEILQKTIDACDRALTLDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLV 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300

Query: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLG GTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of CcUC05G107550 vs. NCBI nr
Match: KAG7032269.1 (U4/U6 small nuclear ribonucleoprotein Prp31-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 885.6 bits (2287), Expect = 2.0e-253
Identity = 471/483 (97.52%), Postives = 475/483 (98.34%), Query Frame = 0


Query: 2   ATLADSFLADLDELSDEDKFQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKTQ 61
           ATLADSFLADLDELSDED F  E+DADAENMEEDIDGDLADLESLNYDDLDSVSKLQKTQ
Sbjct: 64  ATLADSFLADLDELSDEDNFLDEEDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKTQ 123

Query: 62  RYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKY 121
           RYNDIMQKV DALE DSN+S+QGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKY
Sbjct: 124 RYNDIMQKVADALEMDSNVSNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKY 183

Query: 122 RLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLP 181
           RLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLP
Sbjct: 184 RLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLP 243

Query: 182 EEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLAA 241
           EEILQKT+DACDRAL LDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL A
Sbjct: 244 EEILQKTIDACDRALTLDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLVA 303

Query: 242 LAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKST 301
           LAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKST
Sbjct: 304 LAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKST 363

Query: 302 LAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR 361
           LAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR
Sbjct: 364 LAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR 423

Query: 362 KMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAKV 421
           KMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAKV
Sbjct: 424 KMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAKV 483

Query: 422 VKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSKI 481
           VKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLG GTQSTYFSETGTFSKI
Sbjct: 484 VKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSKI 543

Query: 482 RKN 485
           RKN
Sbjct: 544 RKN 546

[Close]

BLAST of CcUC05G107550 vs. NCBI nr
Match: XP_011655634.2 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucumis sativus] >KAE8648722.1 hypothetical protein Csa_009047 [Cucumis sativus])

HSP 1 Score: 885.6 bits (2287), Expect = 2.0e-253
Identity = 471/484 (97.31%), Postives = 479/484 (98.97%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDEDKFQ E  ADAENMEEDIDGDLADLESLNY+DLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKVEDAL+TDSNIS+QGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240
           PEEILQKT+DACDRALALDSAKKMVL FVESRMG+IAPNLSAIVGSAVAAKLMGTAGGLA
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLA 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300
           ALAKMPACNVQLLGAK+KNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLI+AKS
Sbjct: 241 ALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300

Query: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDST GDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of CcUC05G107550 vs. NCBI nr
Match: XP_008446223.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 [Cucumis melo] >KAA0034324.1 U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 [Cucumis melo var. makuwa] >TYK15595.1 U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 885.2 bits (2286), Expect = 2.6e-253
Identity = 471/484 (97.31%), Postives = 478/484 (98.76%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDEDKFQ E  ADAENMEEDIDGDLADLESLNY+DLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKVEDAL+TDSNIS+QGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240
           PEEILQKT+DACDRALALDSAKKMVL FVESRMG+IAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLI+AKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300

Query: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDST GDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of CcUC05G107550 vs. ExPASy Swiss-Prot
Match: Q8RXN6 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog OS=Arabidopsis thaliana OX=3702 GN=PRP31 PE=1 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 1.2e-197
Identity = 372/485 (76.70%), Postives = 418/485 (86.19%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATL DSFLADLDELSD +    E D D    EED+D D+ADLE+LNYDDLD+VSKLQK+
Sbjct: 1   MATLEDSFLADLDELSDNEAELDENDGDVGKEEEDVDMDMADLETLNYDDLDNVSKLQKS 60

Query: 61  QRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRY DIM KVE+AL  DS+ + +G VLEDDPEY+LIV+CN LSVDIENEI+I+HNFI+DK
Sbjct: 61  QRYADIMHKVEEALGKDSDGAEKGTVLEDDPEYKLIVDCNQLSVDIENEIVIVHNFIKDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           Y+LKF ELESLVHHPIDYA VVKKIGNE DL LVDL  LLPSA+IMVVSVTA TT G  L
Sbjct: 121 YKLKFQELESLVHHPIDYACVVKKIGNETDLALVDLADLLPSAIIMVVSVTALTTKGSAL 180

Query: 181 PEEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240
           PE++LQK ++ACDRAL LDSA+K VL FVES+MG IAPNLSAIVGSAVAAKLMGTAGGL+
Sbjct: 181 PEDVLQKVLEACDRALDLDSARKKVLEFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGLS 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300
           ALAKMPACNVQ+LG K+KNLAGFS+ATSQ RVGY+EQTEI+QSTPP L+ RA RL+AAKS
Sbjct: 241 ALAKMPACNVQVLGHKRKNLAGFSSATSQSRVGYLEQTEIYQSTPPGLQARAGRLVAAKS 300

Query: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVD+TRGDP G +G+ F++EI KKIEKWQEPPPA+QPKPLPVPDSEPKK+RGGRRL
Sbjct: 301 TLAARVDATRGDPLGISGKAFREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLA-- 420
           RKMKERY  T+MRKLANRM FG PEESSLGDGLGEGYGMLGQAGS +LRVS+  SKL   
Sbjct: 361 RKMKERYQVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRVSSVPSKLKIN 420

Query: 421 AKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTF 480
           AKV KK KE++Y     TSGLTSSLAFTPVQGIEL NPQ  L  LGSGTQSTYFSE+GTF
Sbjct: 421 AKVAKKLKERQYAGGATTSGLTSSLAFTPVQGIELCNPQQALG-LGSGTQSTYFSESGTF 480

Query: 481 SKIRK 484
           SK++K
Sbjct: 481 SKLKK 484

[Close]

BLAST of CcUC05G107550 vs. ExPASy Swiss-Prot
Match: Q8CCF0 (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Mus musculus OX=10090 GN=Prpf31 PE=1 SV=3)

HSP 1 Score: 384.8 bits (987), Expect = 1.4e-105
Identity = 231/496 (46.57%), Postives = 327/496 (65.93%), Query Frame = 0


Query: 3   TLADSFLADLDELSDEDK----FQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQ 62
           +LAD  LADL+E ++E++     + E++   E+++E+   DL+       D + S++KL 
Sbjct: 2   SLADELLADLEEAAEEEEGGSYGEEEEEPAIEDVQEETQLDLSG------DSVKSIAKLW 61

Query: 63  KTQRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIR 122
            ++ + +IM K+E+ +   +N+S     +E  PEY++IV+ N L+V+IENE+ IIH FIR
Sbjct: 62  DSKMFAEIMMKIEEYISKQANVSEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIR 121

Query: 123 DKYRLKFPELESLVHHPIDYARVVKKIGNEMD--LTLVDLEGLLPSAVIMVVSVTASTTS 182
           DKY  +FPELESLV + +DY R VK++GN +D      +L+ +L +A IMVVSVTASTT 
Sbjct: 122 DKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQ 181

Query: 183 GKPLPEEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTA 242
           G+ L +E L++  +ACD AL L+++K  +  +VESRM +IAPNLS I+G++ AAK+MG A
Sbjct: 182 GQQLSDEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVA 241

Query: 243 GGLAALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLI 302
           GGL  L+KMPACN+ LLGA++K L+GFS+ +     GYI  ++I QS PP L+ +A RL+
Sbjct: 242 GGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLV 301

Query: 303 AAKSTLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRG 362
           AAK TLAARVDS      GK G   KDEI +K +KWQEPPP KQ KPLP P    +KKRG
Sbjct: 302 AAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRG 361

Query: 363 GRRLRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLR---VSAA 422
           GRR RKMKER   TE+RK ANRM FG  EE +  + LG   G LG++GSG++R   V+ A
Sbjct: 362 GRRYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEA 421

Query: 423 QSKLAAKVVKKFKEKR---YGSSGA----TSGLTSSLAFTPVQGIELSNPQAHLNQLGSG 482
                +K +++  +K+   YG        +SG  SS+AFTP+QG+E+ NPQA   ++   
Sbjct: 422 TKARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEA 481

[Close]

BLAST of CcUC05G107550 vs. ExPASy Swiss-Prot
Match: Q8WWY3 (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Homo sapiens OX=9606 GN=PRPF31 PE=1 SV=2)

HSP 1 Score: 380.9 bits (977), Expect = 2.1e-104
Identity = 230/496 (46.37%), Postives = 325/496 (65.52%), Query Frame = 0


Query: 3   TLADSFLADLDELSDEDK----FQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQ 62
           +LAD  LADL+E ++E++     + E++   E+++E+   DL+       D + +++KL 
Sbjct: 2   SLADELLADLEEAAEEEEGGSYGEEEEEPAIEDVQEETQLDLSG------DSVKTIAKLW 61

Query: 63  KTQRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIR 122
            ++ + +IM K+E+ +   +  S     +E  PEY++IV+ N L+V+IENE+ IIH FIR
Sbjct: 62  DSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIR 121

Query: 123 DKYRLKFPELESLVHHPIDYARVVKKIGNEMD--LTLVDLEGLLPSAVIMVVSVTASTTS 182
           DKY  +FPELESLV + +DY R VK++GN +D      +L+ +L +A IMVVSVTASTT 
Sbjct: 122 DKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQ 181

Query: 183 GKPLPEEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTA 242
           G+ L EE L++  +ACD AL L+++K  +  +VESRM +IAPNLS I+G++ AAK+MG A
Sbjct: 182 GQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVA 241

Query: 243 GGLAALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLI 302
           GGL  L+KMPACN+ LLGA++K L+GFS+ +     GYI  ++I QS PP L+ +A RL+
Sbjct: 242 GGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLV 301

Query: 303 AAKSTLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRG 362
           AAK TLAARVDS      GK G   KDEI +K +KWQEPPP KQ KPLP P    +KKRG
Sbjct: 302 AAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRG 361

Query: 363 GRRLRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLR---VSAA 422
           GRR RKMKER   TE+RK ANRM FG  EE +  + LG   G LG++GSG++R   V+ A
Sbjct: 362 GRRYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEA 421

Query: 423 QSKLAAKVVKKFKEKR---YGSSGA----TSGLTSSLAFTPVQGIELSNPQAHLNQLGSG 482
                +K +++  +K+   YG        +SG  SS+AFTP+QG+E+ NPQA   ++   
Sbjct: 422 TKARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEA 481

[Close]

BLAST of CcUC05G107550 vs. ExPASy Swiss-Prot
Match: Q5U5C5 (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus laevis OX=8355 GN=prpf31 PE=2 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 6.0e-104
Identity = 230/492 (46.75%), Postives = 322/492 (65.45%), Query Frame = 0


Query: 3   TLADSFLADLDELSDEDKFQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKTQR 62
           +LAD  LADL+E ++E++     + D E +EE +D ++     LN + + S++KL  ++ 
Sbjct: 2   SLADELLADLEEAAEEEEENLIDEDDLETIEE-VDEEMQ--VDLNAESVKSIAKLSDSKL 61

Query: 63  YNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKYR 122
           +++I+ K+E  ++     S     +E  PEY++IV+ N L+V+IENE+ IIH FIRDKY 
Sbjct: 62  FSEILLKIEGYIQKQPKASEVMGPVEAAPEYKVIVDANNLTVEIENELNIIHKFIRDKYS 121

Query: 123 LKFPELESLVHHPIDYARVVKKIGNEMD--LTLVDLEGLLPSAVIMVVSVTASTTSGKPL 182
            +FPELESLV + +DY R VK++GN +D      +L+ +L +A IMVVSVTASTT G+ L
Sbjct: 122 KRFPELESLVPNALDYIRTVKELGNNLDKCKNNENLQQILTNATIMVVSVTASTTQGQQL 181

Query: 183 PEEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 242
            +E L++  +ACD AL L+ +K  +  +VESRM +IAPNLS IVG++ AAK+MG AGGL 
Sbjct: 182 TDEELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGIAGGLT 241

Query: 243 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 302
            L+KMPACNV LLGA++K L GFS+ +     GYI  +EI QS P  L  +A RL++AK 
Sbjct: 242 NLSKMPACNVMLLGAQRKTLTGFSSTSVLPHTGYIYHSEIVQSLPSDLHRKAARLVSAKC 301

Query: 303 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 362
           TLA+RVDS   +P GK G   K+EI +K +KWQEPPP KQ KPLP P    +KKRGGRR 
Sbjct: 302 TLASRVDSFHENPEGKIGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRY 361

Query: 363 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLR---VSAAQSKL 422
           RKMKER   TE+RK ANRM FG  EE +  + LG   G LG++GSG++R   V+ A    
Sbjct: 362 RKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRIRQAQVNEATKAR 421

Query: 423 AAKVVKKFKEKR---YGSSGA----TSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQST 482
            +K +++  +K+   YG        +SG  SS+AFTP+QG+E+ NPQA   ++    Q  
Sbjct: 422 ISKTLQRTLQKQSVVYGGKSTVRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQK- 481

[Close]

BLAST of CcUC05G107550 vs. ExPASy Swiss-Prot
Match: Q6NVP6 (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus tropicalis OX=8364 GN=prpf31 PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 1.9e-102
Identity = 228/492 (46.34%), Postives = 319/492 (64.84%), Query Frame = 0


Query: 3   TLADSFLADLDELSDEDKFQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKTQR 62
           +LAD  LADL+E ++E++     + D E +EE  +    D   LN + + S++KL  ++ 
Sbjct: 2   SLADELLADLEEAAEEEEENLIDEDDLETIEEVQEEMQVD---LNAESVKSIAKLSDSKL 61

Query: 63  YNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKYR 122
           +++I+ K++  ++     S     +E  PEY++IV+ N L+V+IENE+ IIH FIRDKY 
Sbjct: 62  FSEILLKIDGYIKKQPKASEVMGPVEAAPEYKVIVDANNLTVEIENELNIIHKFIRDKYS 121

Query: 123 LKFPELESLVHHPIDYARVVKKIGNEMD--LTLVDLEGLLPSAVIMVVSVTASTTSGKPL 182
            +FPELESLV + +DY R VK++GN +D      +L+ +L +A IMVVSVTASTT G+ L
Sbjct: 122 KRFPELESLVPNALDYIRTVKELGNNLDKCKNNENLQQILTNATIMVVSVTASTTQGQQL 181

Query: 183 PEEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 242
            +E L++  +ACD AL L+ +K  +  +VESRM +IAPNLS IVG++ AAK+MG AGGL 
Sbjct: 182 TDEELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGIAGGLT 241

Query: 243 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 302
            L+KMPACNV LLGA++K L+GFS+ +     GYI  ++I QS PP L  +A RL++AK 
Sbjct: 242 NLSKMPACNVMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLHRKAARLVSAKC 301

Query: 303 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 362
           TLAARVDS      GK G   K+EI +K +KWQEPPP KQ KPLP P    +KKRGGRR 
Sbjct: 302 TLAARVDSFHESSEGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRY 361

Query: 363 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLR---VSAAQSKL 422
           RKMKER   TE+RK ANRM F   EE +  + LG   G LG++GSG++R   V+ A    
Sbjct: 362 RKMKERLGLTEIRKQANRMSFAEIEEDAYQEDLGFSLGHLGKSGSGRIRQAQVNEATKAR 421

Query: 423 AAKVVKKFKEKR---YGSSGA----TSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQST 482
            +K +++  +K+   YG        +SG  SS+AFTP+QG+E+ NPQA   ++    Q  
Sbjct: 422 ISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQK- 481

[Close]

BLAST of CcUC05G107550 vs. ExPASy TrEMBL
Match: A0A6J1KRI6 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497587 PE=3 SV=1)

HSP 1 Score: 887.5 bits (2292), Expect = 2.5e-254
Identity = 472/484 (97.52%), Postives = 476/484 (98.35%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDED F  E+DADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDNFLDEEDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKV DALE DSN+S+QGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVADALEMDSNVSNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240
           PEEILQKT+DACDRAL LDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEEILQKTIDACDRALTLDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLV 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300

Query: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLG GTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of CcUC05G107550 vs. ExPASy TrEMBL
Match: A0A6J1GXP7 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458320 PE=3 SV=1)

HSP 1 Score: 887.5 bits (2292), Expect = 2.5e-254
Identity = 472/484 (97.52%), Postives = 476/484 (98.35%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDED F  E+DADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDNFLDEEDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKV DALE DSN+S+QGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVADALEMDSNVSNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240
           PEEILQKT+DACDRAL LDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEEILQKTIDACDRALTLDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLV 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300

Query: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLG GTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of CcUC05G107550 vs. ExPASy TrEMBL
Match: A0A5A7SSX6 (U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00920 PE=3 SV=1)

HSP 1 Score: 885.2 bits (2286), Expect = 1.3e-253
Identity = 471/484 (97.31%), Postives = 478/484 (98.76%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDEDKFQ E  ADAENMEEDIDGDLADLESLNY+DLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKVEDAL+TDSNIS+QGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240
           PEEILQKT+DACDRALALDSAKKMVL FVESRMG+IAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLI+AKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300

Query: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDST GDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of CcUC05G107550 vs. ExPASy TrEMBL
Match: A0A1S3BF76 (U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489018 PE=3 SV=1)

HSP 1 Score: 885.2 bits (2286), Expect = 1.3e-253
Identity = 471/484 (97.31%), Postives = 478/484 (98.76%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDEDKFQ E  ADAENMEEDIDGDLADLESLNY+DLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKVEDAL+TDSNIS+QGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240
           PEEILQKT+DACDRALALDSAKKMVL FVESRMG+IAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLI+AKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300

Query: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDST GDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of CcUC05G107550 vs. ExPASy TrEMBL
Match: A0A0A0KSD2 (Nop domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G602130 PE=3 SV=1)

HSP 1 Score: 884.0 bits (2283), Expect = 2.8e-253
Identity = 470/484 (97.11%), Postives = 478/484 (98.76%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MAT ADSFLADLDELSDEDKFQ E  ADAENMEEDIDGDLADLESLNY+DLDSVSKLQKT
Sbjct: 1   MATFADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKVEDAL+TDSNIS+QGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240
           PEEILQKT+DACDRALALDSAKKMVL FVESRMG+IAPNLSAIVGSAVAAKLMGTAGGLA
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLA 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300
           ALAKMPACNVQLLGAK+KNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLI+AKS
Sbjct: 241 ALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300

Query: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDST GDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of CcUC05G107550 vs. TAIR 10
Match: AT1G60170.1 (pre-mRNA processing ribonucleoprotein binding region-containing protein )

HSP 1 Score: 690.6 bits (1781), Expect = 8.7e-199
Identity = 372/485 (76.70%), Postives = 418/485 (86.19%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQAEQDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATL DSFLADLDELSD +    E D D    EED+D D+ADLE+LNYDDLD+VSKLQK+
Sbjct: 1   MATLEDSFLADLDELSDNEAELDENDGDVGKEEEDVDMDMADLETLNYDDLDNVSKLQKS 60

Query: 61  QRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRY DIM KVE+AL  DS+ + +G VLEDDPEY+LIV+CN LSVDIENEI+I+HNFI+DK
Sbjct: 61  QRYADIMHKVEEALGKDSDGAEKGTVLEDDPEYKLIVDCNQLSVDIENEIVIVHNFIKDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           Y+LKF ELESLVHHPIDYA VVKKIGNE DL LVDL  LLPSA+IMVVSVTA TT G  L
Sbjct: 121 YKLKFQELESLVHHPIDYACVVKKIGNETDLALVDLADLLPSAIIMVVSVTALTTKGSAL 180

Query: 181 PEEILQKTMDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240
           PE++LQK ++ACDRAL LDSA+K VL FVES+MG IAPNLSAIVGSAVAAKLMGTAGGL+
Sbjct: 181 PEDVLQKVLEACDRALDLDSARKKVLEFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGLS 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300
           ALAKMPACNVQ+LG K+KNLAGFS+ATSQ RVGY+EQTEI+QSTPP L+ RA RL+AAKS
Sbjct: 241 ALAKMPACNVQVLGHKRKNLAGFSSATSQSRVGYLEQTEIYQSTPPGLQARAGRLVAAKS 300

Query: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVD+TRGDP G +G+ F++EI KKIEKWQEPPPA+QPKPLPVPDSEPKK+RGGRRL
Sbjct: 301 TLAARVDATRGDPLGISGKAFREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLA-- 420
           RKMKERY  T+MRKLANRM FG PEESSLGDGLGEGYGMLGQAGS +LRVS+  SKL   
Sbjct: 361 RKMKERYQVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRVSSVPSKLKIN 420

Query: 421 AKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTF 480
           AKV KK KE++Y     TSGLTSSLAFTPVQGIEL NPQ  L  LGSGTQSTYFSE+GTF
Sbjct: 421 AKVAKKLKERQYAGGATTSGLTSSLAFTPVQGIELCNPQQALG-LGSGTQSTYFSESGTF 480

Query: 481 SKIRK 484
           SK++K
Sbjct: 481 SKLKK 484

[Close]

BLAST of CcUC05G107550 vs. TAIR 10
Match: AT1G70400.1 (CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: pre-mRNA processing ribonucleoprotein binding region-containing protein (TAIR:AT1G60170.1); Has 479 Blast hits to 479 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 138; Plants - 124; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). )

HSP 1 Score: 211.5 bits (537), Expect = 1.5e-54
Identity = 117/172 (68.02%), Postives = 137/172 (79.65%), Query Frame = 0


Query: 39  DLADLESLNYDDLDSVSKLQKTQRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVE 98
           D+ +L +L YDDLDSVSKLQK++RY DIMQ+VE+ALE        G VLE     +LIV+
Sbjct: 2   DMTELNTLTYDDLDSVSKLQKSRRYADIMQQVEEALE--------GSVLE---YKKLIVD 61

Query: 99  CNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEG 158
           C  L VDIENEI+I+ NFIRDKYR+KF ELE LV HPIDYARVVK+IGNEMDL LVDLEG
Sbjct: 62  CKQLLVDIENEIVIVQNFIRDKYRVKFQELELLVPHPIDYARVVKRIGNEMDLKLVDLEG 121

Query: 159 LLPSAVIMVVSVTASTTSGKPLPEEILQKTMDACDRALALDSAKKMVLNFVE 211
           LLPSA+IMV+ VTA TT G  LPE++L KT+DACDRAL LDSA+K VL FV+
Sbjct: 122 LLPSAMIMVLLVTALTTKGNQLPEDVLLKTIDACDRALDLDSARKKVLEFVD 162

[Close]

BLAST of CcUC05G107550 vs. TAIR 10
Match: AT1G70400.2 (CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: pre-mRNA processing ribonucleoprotein binding region-containing protein (TAIR:AT1G60170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 204.5 bits (519), Expect = 1.9e-52
Identity = 113/165 (68.48%), Postives = 132/165 (80.00%), Query Frame = 0


Query: 39  DLADLESLNYDDLDSVSKLQKTQRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVE 98
           D+ +L +L YDDLDSVSKLQK++RY DIMQ+VE+ALE        G VLE     +LIV+
Sbjct: 2   DMTELNTLTYDDLDSVSKLQKSRRYADIMQQVEEALE--------GSVLE---YKKLIVD 61

Query: 99  CNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEG 158
           C  L VDIENEI+I+ NFIRDKYR+KF ELE LV HPIDYARVVK+IGNEMDL LVDLEG
Sbjct: 62  CKQLLVDIENEIVIVQNFIRDKYRVKFQELELLVPHPIDYARVVKRIGNEMDLKLVDLEG 121

Query: 159 LLPSAVIMVVSVTASTTSGKPLPEEILQKTMDACDRALALDSAKK 204
           LLPSA+IMV+ VTA TT G  LPE++L KT+DACDRAL LDSA+K
Sbjct: 122 LLPSAMIMVLLVTALTTKGNQLPEDVLLKTIDACDRALDLDSARK 155

[Close]

BLAST of CcUC05G107550 vs. TAIR 10
Match: AT1G70400.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: pre-mRNA processing ribonucleoprotein binding region-containing protein (TAIR:AT1G60170.1); Has 484 Blast hits to 484 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 134; Plants - 124; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). )

HSP 1 Score: 204.5 bits (519), Expect = 1.9e-52
Identity = 113/165 (68.48%), Postives = 132/165 (80.00%), Query Frame = 0


Query: 39  DLADLESLNYDDLDSVSKLQKTQRYNDIMQKVEDALETDSNISSQGFVLEDDPEYQLIVE 98
           D+ +L +L YDDLDSVSKLQK++RY DIMQ+VE+ALE        G VLE     +LIV+
Sbjct: 2   DMTELNTLTYDDLDSVSKLQKSRRYADIMQQVEEALE--------GSVLE---YKKLIVD 61

Query: 99  CNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEG 158
           C  L VDIENEI+I+ NFIRDKYR+KF ELE LV HPIDYARVVK+IGNEMDL LVDLEG
Sbjct: 62  CKQLLVDIENEIVIVQNFIRDKYRVKFQELELLVPHPIDYARVVKRIGNEMDLKLVDLEG 121

Query: 159 LLPSAVIMVVSVTASTTSGKPLPEEILQKTMDACDRALALDSAKK 204
           LLPSA+IMV+ VTA TT G  LPE++L KT+DACDRAL LDSA+K
Sbjct: 122 LLPSAMIMVLLVTALTTKGNQLPEDVLLKTIDACDRALDLDSARK 155

[Close]

BLAST of CcUC05G107550 vs. TAIR 10
Match: AT3G05060.1 (NOP56-like pre RNA processing ribonucleoprotein )

HSP 1 Score: 101.3 bits (251), Expect = 2.3e-21
Identity = 68/223 (30.49%), Postives = 112/223 (50.22%), Query Frame = 0


Query: 95  LIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLV 154
           +I++   L  D++ E+      +R+ Y   FPEL  ++   I YA+ VK +GN ++   +
Sbjct: 160 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIISDNILYAKSVKLMGNRVNAAKL 219

Query: 155 DLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTMDACDRALALDSAKKMVLNFVESRMG 214
           D   +L   +   +   A  + G  + +  L    + CD+ L+L   +  + ++++SRM 
Sbjct: 220 DFSEILADEIEADLKDAAVISMGTEVSDLDLLHIRELCDQVLSLSEYRAQLYDYLKSRMN 279

Query: 215 YIAPNLSAIVGSAVAAKLMGTAGGLAALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGY 274
            IAPNL+A+VG  V A+L+   G L  L+K P   VQ+LGA+K       T  +  + G 
Sbjct: 280 TIAPNLTALVGELVGARLISHGGSLLNLSKQPGSTVQILGAEKALFRALKTKHATPKYGL 339

Query: 275 IEQTEIFQSTPPPLKMRACRLIAAKSTLAARVDSTRGDPTGKT 318
           I    +     P  K +  R +AAK+ LA RVD+  GD    T
Sbjct: 340 IFHASLVGQAAPKHKGKISRSLAAKTVLAIRVDAL-GDSQDNT 381

The following BLAST results are available for this feature:

BLAST of CcUC05G107550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892283.1	1.8e-254	97.52	U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Benincasa hispid...	[more]
XP_022956658.1	5.2e-254	97.52	U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucurbita moscha...	[more]
KAG7032269.1	2.0e-253	97.52	U4/U6 small nuclear ribonucleoprotein Prp31-like protein, partial [Cucurbita arg...	[more]
XP_011655634.2	2.0e-253	97.31	U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucumis sativus]...	[more]
XP_008446223.1	2.6e-253	97.31	PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 [Cucumis melo]...	[more]

BLAST of CcUC05G107550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXN6	1.2e-197	76.70	U4/U6 small nuclear ribonucleoprotein Prp31 homolog OS=Arabidopsis thaliana OX=3...	[more]
Q8CCF0	1.4e-105	46.57	U4/U6 small nuclear ribonucleoprotein Prp31 OS=Mus musculus OX=10090 GN=Prpf31 P...	[more]
Q8WWY3	2.1e-104	46.37	U4/U6 small nuclear ribonucleoprotein Prp31 OS=Homo sapiens OX=9606 GN=PRPF31 PE...	[more]
Q5U5C5	6.0e-104	46.75	U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus laevis OX=8355 GN=prpf31 ...	[more]
Q6NVP6	1.9e-102	46.34	U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus tropicalis OX=8364 GN=prp...	[more]

BLAST of CcUC05G107550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KRI6	2.5e-254	97.52	U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1GXP7	2.5e-254	97.52	U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 OS=Cucurbita mosc...	[more]
A0A5A7SSX6	1.3e-253	97.31	U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 OS=Cucumis melo var. maku...	[more]
A0A1S3BF76	1.3e-253	97.31	U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 OS=Cucumis melo OX=3656 G...	[more]
A0A0A0KSD2	2.8e-253	97.11	Nop domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G602130 PE=3 SV...	[more]

BLAST of CcUC05G107550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60170.1	8.7e-199	76.70	pre-mRNA processing ribonucleoprotein binding region-containing protein	[more]
AT1G70400.1	1.5e-54	68.02	CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976); BEST Arabidopsis thalian...	[more]
AT1G70400.2	1.9e-52	68.48	CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976); BEST Arabidopsis thalian...	[more]
AT1G70400.3	1.9e-52	68.48	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G05060.1	2.3e-21	30.49	NOP56-like pre RNA processing ribonucleoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012976	NOSIC	SMART	SM00931	NOSIC_2	coord: 95..147 e-value: 6.4E-23 score: 92.1
IPR042239	Nop, C-terminal domain	GENE3D	1.10.246.90	Nop domain	coord: 217..342 e-value: 1.1E-40 score: 140.3
IPR002687	Nop domain	PFAM	PF01798	Nop	coord: 103..331 e-value: 2.8E-73 score: 246.2
IPR002687	Nop domain	PROSITE	PS51358	NOP	coord: 216..334 score: 37.543999
None	No IPR available	GENE3D	1.10.287.4070		coord: 54..216 e-value: 7.3E-57 score: 193.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..361
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..35
None	No IPR available	PANTHER	PTHR13904:SF0	U4/U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP31	coord: 1..481
IPR019175	Prp31 C-terminal	PFAM	PF09785	Prp31_C	coord: 339..456 e-value: 3.8E-43 score: 147.3
IPR027105	U4/U6 small nuclear ribonucleoprotein Prp31	PANTHER	PTHR13904	PRE-MRNA SPLICING FACTOR PRP31	coord: 1..481
IPR036070	Nop domain superfamily	SUPERFAMILY	89124	Nop domain	coord: 88..334

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G107550.1	CcUC05G107550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000244	spliceosomal tri-snRNP complex assembly
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071011	precatalytic spliceosome
cellular_component	GO:0005687	U4 snRNP
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex
molecular_function	GO:0003723	RNA binding