Homology
BLAST of CcUC05G106580 vs. NCBI nr
Match:
XP_038893049.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Benincasa hispida])
HSP 1 Score: 1167.5 bits (3019), Expect = 0.0e+00
Identity = 566/599 (94.49%), Postives = 582/599 (97.16%), Query Frame = 0
Query: 1 MPVSCIPTCQFTLTKPSSTFSKNEFMNPPHPLSLLSKCTSLRELKQIQAYTMKTNLQNDI 60
M VSCIPTCQFTLTKPSSTFS NEF+N PHPLSLLSKCTSLRELKQIQAYT+KTNLQND+
Sbjct: 1 MTVSCIPTCQFTLTKPSSTFSNNEFINQPHPLSLLSKCTSLRELKQIQAYTIKTNLQNDV 60
Query: 61 SVLTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQL 120
SVLTKLIN CT NPT SSMD+AHHLFDQI DKDIVLFNIMARGYARSNSP LAFSLFA++
Sbjct: 61 SVLTKLINICTRNPTTSSMDYAHHLFDQISDKDIVLFNIMARGYARSNSPNLAFSLFAKV 120
Query: 121 LCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDM 180
L SGLLPDDYTFSSLLKACASSKA K+GMELHCFAIKLGLNHNIYICPTLINMYAECNDM
Sbjct: 121 LSSGLLPDDYTFSSLLKACASSKAFKQGMELHCFAIKLGLNHNIYICPTLINMYAECNDM 180
Query: 181 NAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSC 240
NAARGVFDE+EQPCIVSYNAIITGYARSSQPNEALSLFRELQAS+LEPTDVTMLS+IMSC
Sbjct: 181 NAARGVFDEIEQPCIVSYNAIITGYARSSQPNEALSLFRELQASHLEPTDVTMLSIIMSC 240
Query: 241 ALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWS 300
ALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAKCGSL DAISIFEGM VRDTQAWS
Sbjct: 241 ALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLADAISIFEGMRVRDTQAWS 300
Query: 301 AMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKN 360
AMIVAFATHGDGLKAISMFEEMKR GVRPDEITFLGLLYACSHAGLVEQGR YFY+MSKN
Sbjct: 301 AMIVAFATHGDGLKAISMFEEMKRTGVRPDEITFLGLLYACSHAGLVEQGREYFYNMSKN 360
Query: 361 YGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKR 420
YGITPGIKHYGCMVDLLGRTGRLDEAYNFI ELEIKPTP+LWRTLLSACSTHGNVDMAKR
Sbjct: 361 YGITPGIKHYGCMVDLLGRTGRLDEAYNFIDELEIKPTPVLWRTLLSACSTHGNVDMAKR 420
Query: 421 VIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 480
V +RIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH
Sbjct: 421 VTERIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 480
Query: 481 EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA 540
EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA
Sbjct: 481 EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA 540
Query: 541 MAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLLSLIFGRQIVIRDVQRFHRFEDGKCSC 600
MAFGLLNTPPGTTIRVVKNLRICGDCHN AKL+SLIFGRQI+IRDVQRFHRFE+GKCSC
Sbjct: 541 MAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIIIRDVQRFHRFENGKCSC 599
BLAST of CcUC05G106580 vs. NCBI nr
Match:
XP_008446357.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucumis melo] >KAA0034422.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK17712.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1156.4 bits (2990), Expect = 0.0e+00
Identity = 559/600 (93.17%), Postives = 584/600 (97.33%), Query Frame = 0
Query: 1 MPVSCIPTCQFTLTKPSSTFSKNEF-MNPPHPLSLLSKCTSLRELKQIQAYTMKTNLQND 60
M +SCIPTCQFTLTKPSSTFSKNEF +N HPLSLLSKCTSL+ELKQIQAYT+KTNLQ+D
Sbjct: 1 MAISCIPTCQFTLTKPSSTFSKNEFVINQLHPLSLLSKCTSLKELKQIQAYTIKTNLQSD 60
Query: 61 ISVLTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQ 120
ISVLTKLINFCTLNPT S MDHAHHLFDQI DKDI+LFNIMARGYARSNSPYLAFSLFAQ
Sbjct: 61 ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFAQ 120
Query: 121 LLCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECND 180
LLCSGLLPDDYTFSSLLKACASSKAL++GM LHCFA+KLGLNHNIYICPTLINMYAECND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALRQGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180
Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMS 240
MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQAS++EPTDVTMLSVIMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASDIEPTDVTMLSVIMS 240
Query: 241 CALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAW 300
CALLGALDLG+WIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGM VRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300
Query: 301 SAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
SAMIVAFATHGDGLK+IS+FEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMS+
Sbjct: 301 SAMIVAFATHGDGLKSISIFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSR 360
Query: 361 NYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAK 420
YGITPGIKHYGCMVDLLGRTG LDEAYNF+ ELEIKPTPILWRTLLSACSTHGNV+MAK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRTGCLDEAYNFVDELEIKPTPILWRTLLSACSTHGNVEMAK 420
Query: 421 RVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
RVI+RIFELDDSHGGDYVILSNL ARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDSHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
Query: 481 HEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
HEFFSGDGVHC+SVELRRALDEL+KEIKLVGY+PDTSLVYHADM+EEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYIPDTSLVYHADMDEEGKELVLRYHSEKL 540
Query: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLLSLIFGRQIVIRDVQRFHRFEDGKCSC 600
AMAFGLLNTPPGTTIRV KNLRICGDCHN AKL+S IFGR+IVIRDVQRFH+FEDGKCSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHQFEDGKCSC 600
BLAST of CcUC05G106580 vs. NCBI nr
Match:
XP_031742214.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucumis sativus])
HSP 1 Score: 1152.5 bits (2980), Expect = 0.0e+00
Identity = 559/600 (93.17%), Postives = 578/600 (96.33%), Query Frame = 0
Query: 1 MPVSCIPTCQFTLTKPSSTFSKNEF-MNPPHPLSLLSKCTSLRELKQIQAYTMKTNLQND 60
M +SCIPTCQFTLTKPSS FSKNEF +N HPLSLLSKCTSL ELKQIQAYT+KTNLQ+D
Sbjct: 1 MAISCIPTCQFTLTKPSSAFSKNEFVINQLHPLSLLSKCTSLNELKQIQAYTIKTNLQSD 60
Query: 61 ISVLTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQ 120
ISVLTKLINFCTLNPT S MDHAHHLFDQI DKDI+LFNIMARGYARSNSPYLAFSLF +
Sbjct: 61 ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGE 120
Query: 121 LLCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECND 180
LLCSGLLPDDYTFSSLLKACASSKAL+EGM LHCFA+KLGLNHNIYICPTLINMYAECND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180
Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMS 240
MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASN+EPTDVTMLSVIMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240
Query: 241 CALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAW 300
CALLGALDLG+WIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGM VRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300
Query: 301 SAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
SAMIVAFATHGDGLKAISMFEEMKR GVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK
Sbjct: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
Query: 361 NYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAK 420
YGITPGIKHYGCMVDLLGR G LDEAYNF+ +LEIK TPILWRTLLSACSTHGNV+MAK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAK 420
Query: 421 RVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
RVI+RIFELDD+HGGDYVILSNL ARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
Query: 481 HEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
HEFFSGDGVHC+SVELRRALDEL+KEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
Query: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLLSLIFGRQIVIRDVQRFHRFEDGKCSC 600
AMAFGLLNTPPGTTIRV KNLRICGDCHN AKL+S IFGR+IVIRDVQRFHRFEDGKCSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600
BLAST of CcUC05G106580 vs. NCBI nr
Match:
XP_022151060.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic isoform X1 [Momordica charantia])
HSP 1 Score: 1128.6 bits (2918), Expect = 0.0e+00
Identity = 544/599 (90.82%), Postives = 569/599 (94.99%), Query Frame = 0
Query: 1 MPVSCIPTCQFTLTKPSSTFSKNEFMNPPHPLSLLSKCTSLRELKQIQAYTMKTNLQNDI 60
M +SCIP+CQFTL KP+S F NEF NPPHPL LLSKCTSLRELKQIQA+T+KTNLQNDI
Sbjct: 1 MGISCIPSCQFTLAKPNSAFPNNEFTNPPHPLFLLSKCTSLRELKQIQAFTIKTNLQNDI 60
Query: 61 SVLTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQL 120
SVLTK+INFCTLNP+ SSMDHAHHLFDQIPDKDIVLFNIMARGYARSN+PYLAFSLF+Q+
Sbjct: 61 SVLTKIINFCTLNPSTSSMDHAHHLFDQIPDKDIVLFNIMARGYARSNTPYLAFSLFSQV 120
Query: 121 LCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDM 180
LCSGLLPDDYTFSSLLKACASSKA EG +LHCFAIKLGLNHNIYICP+LIN+YAECNDM
Sbjct: 121 LCSGLLPDDYTFSSLLKACASSKAFSEGRQLHCFAIKLGLNHNIYICPSLINLYAECNDM 180
Query: 181 NAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSC 240
NAARGVFDEME PCIVSYNAIITG+ARSSQPNEALSLFRELQASNLEPTDVTMLS+IMSC
Sbjct: 181 NAARGVFDEMEAPCIVSYNAIITGHARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSC 240
Query: 241 ALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWS 300
ALLGALDLGRWIHEYVKKKGFDK+VKVNTALIDM+AKCGSL DAISIFE M VRDTQAWS
Sbjct: 241 ALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSLVDAISIFEDMRVRDTQAWS 300
Query: 301 AMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKN 360
AMIVA+ATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVE+GRGYF SMSK
Sbjct: 301 AMIVAYATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEEGRGYFNSMSKY 360
Query: 361 YGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKR 420
YGI PGIKHYGCMVDLLGRTG LDEAY FI EIKPTPILWRTLLSACS GNVD+AKR
Sbjct: 361 YGIAPGIKHYGCMVDLLGRTGHLDEAYKFIDGSEIKPTPILWRTLLSACSNRGNVDLAKR 420
Query: 421 VIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 480
VI+RIFELDDSHGGDYVILSNLCARVGRWEDVNH+RKLMKDRGVVKVPGCSSVEVNNVVH
Sbjct: 421 VIERIFELDDSHGGDYVILSNLCARVGRWEDVNHIRKLMKDRGVVKVPGCSSVEVNNVVH 480
Query: 481 EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA 540
EFFSGDGVH ISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA
Sbjct: 481 EFFSGDGVHSISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA 540
Query: 541 MAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLLSLIFGRQIVIRDVQRFHRFEDGKCSC 600
+AFGLLN+PPGT IRVVKNLRICGDCH AKL+S IFGRQIVIRDVQRFHRFEDGKCSC
Sbjct: 541 IAFGLLNSPPGTPIRVVKNLRICGDCHTAAKLISFIFGRQIVIRDVQRFHRFEDGKCSC 599
BLAST of CcUC05G106580 vs. NCBI nr
Match:
XP_023541252.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1122.8 bits (2903), Expect = 0.0e+00
Identity = 545/599 (90.98%), Postives = 568/599 (94.82%), Query Frame = 0
Query: 1 MPVSCIPTCQFTLTKPSSTFSKNEFMNPPHPLSLLSKCTSLRELKQIQAYTMKTNLQNDI 60
M +SCIPT QF L+KP KNEF+N PHPLSL SKC+SLRELKQIQAYT+KTNL NDI
Sbjct: 1 MAISCIPTSQFALSKP-----KNEFINQPHPLSLFSKCSSLRELKQIQAYTIKTNLHNDI 60
Query: 61 SVLTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQL 120
SVLTKLINFCT NPTISSMDHAHHLFD++ DKDIVLFNIMARGYARSNSPYL FSLFAQ+
Sbjct: 61 SVLTKLINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQV 120
Query: 121 LCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDM 180
LCSGLLPDDYTFSSLLKACA SKAL+EG +LHCFAIKLGL HNIYICPTLINMYA CNDM
Sbjct: 121 LCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDM 180
Query: 181 NAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSC 240
NAARGVFD ME+PCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLS+IMSC
Sbjct: 181 NAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSC 240
Query: 241 ALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWS 300
ALLGALDLGRWIHEYVKKKGFDK+VKVNTALIDM+AKCGS+ DAISIFEGM VRDTQAWS
Sbjct: 241 ALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWS 300
Query: 301 AMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKN 360
AMIVAFATHGDGLKAISMFEEMK+AGVRPDEITFLGLLYACSHAGLVE+GRGYFYSM KN
Sbjct: 301 AMIVAFATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVEEGRGYFYSMYKN 360
Query: 361 YGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKR 420
+GITPGIKHYGCMVDLLGRTGRLDEAY FI EL IKPTPILWRTLLSACS HGNVD+AKR
Sbjct: 361 HGITPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKR 420
Query: 421 VIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 480
VI+RIFELDDSHGGDYVILSNLCAR+GRWEDVN LRKLMKDRGVVKVPGCSSVEVNNVVH
Sbjct: 421 VIERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVVKVPGCSSVEVNNVVH 480
Query: 481 EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA 540
EFFSGDGVH ISVELRRALDELIKEIKL GYVPDTSLVYHADMEEE KELVLRYHSEKLA
Sbjct: 481 EFFSGDGVHSISVELRRALDELIKEIKLAGYVPDTSLVYHADMEEEAKELVLRYHSEKLA 540
Query: 541 MAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLLSLIFGRQIVIRDVQRFHRFEDGKCSC 600
MAFGLLNTPPGTTIRVVKNLRICGDCHN AKL+SLIFGRQIVIRDVQRFHRFEDG+CSC
Sbjct: 541 MAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSC 594
BLAST of CcUC05G106580 vs. ExPASy Swiss-Prot
Match:
Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)
HSP 1 Score: 822.0 bits (2122), Expect = 4.4e-237
Identity = 386/589 (65.53%), Postives = 479/589 (81.32%), Query Frame = 0
Query: 11 FTLTKPSSTFSKNEFMNPPHPLSLLSKCTSLRELKQIQAYTMKTNLQNDISVLTKLINFC 70
F+ + + SK + +N +P+ L+SKC SLREL QIQAY +K++++ D+S + KLINFC
Sbjct: 12 FSHAETFTKHSKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFC 71
Query: 71 TLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQLLCSGLLPDDY 130
T +PT SSM +A HLF+ + + DIV+FN MARGY+R +P FSLF ++L G+LPD+Y
Sbjct: 72 TESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNY 131
Query: 131 TFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDMNAARGVFDEM 190
TF SLLKACA +KAL+EG +LHC ++KLGL+ N+Y+CPTLINMY EC D+++AR VFD +
Sbjct: 132 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI 191
Query: 191 EQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSCALLGALDLGR 250
+PC+V YNA+ITGYAR ++PNEALSLFRE+Q L+P ++T+LSV+ SCALLG+LDLG+
Sbjct: 192 VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK 251
Query: 251 WIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWSAMIVAFATHG 310
WIH+Y KK F KYVKVNTALIDMFAKCGSL DA+SIFE M +DTQAWSAMIVA+A HG
Sbjct: 252 WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHG 311
Query: 311 DGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKNYGITPGIKHY 370
K++ MFE M+ V+PDEITFLGLL ACSH G VE+GR YF M +GI P IKHY
Sbjct: 312 KAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHY 371
Query: 371 GCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKRVIDRIFELDD 430
G MVDLL R G L++AY FI +L I PTP+LWR LL+ACS+H N+D+A++V +RIFELDD
Sbjct: 372 GSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDD 431
Query: 431 SHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHC 490
SHGGDYVILSNL AR +WE V+ LRK+MKDR VKVPGCSS+EVNNVVHEFFSGDGV
Sbjct: 432 SHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKS 491
Query: 491 ISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPP 550
+ +L RALDE++KE+KL GYVPDTS+V HA+M ++ KE+ LRYHSEKLA+ FGLLNTPP
Sbjct: 492 ATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPP 551
Query: 551 GTTIRVVKNLRICGDCHNTAKLLSLIFGRQIVIRDVQRFHRFEDGKCSC 600
GTTIRVVKNLR+C DCHN AKL+SLIFGR++V+RDVQRFH FEDGKCSC
Sbjct: 552 GTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSC 599
BLAST of CcUC05G106580 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 488.0 bits (1255), Expect = 1.5e-136
Identity = 237/601 (39.43%), Postives = 367/601 (61.06%), Query Frame = 0
Query: 29 PHPLSLLSKCTSLRELKQIQAYTMKTNLQNDISVLTKLINFCTLNPTISS---------- 88
P L +K + +E +QI + +K D+ V T LI+ N +
Sbjct: 138 PFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH 197
Query: 89 ------------------MDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQL 148
+++A LFD+IP KD+V +N M GYA + + A LF +
Sbjct: 198 RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257
Query: 149 LCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDM 208
+ + + PD+ T +++ ACA S +++ G ++H + G N+ I LI++Y++C ++
Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 209 NAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSC 268
A G+F+ + ++S+N +I GY + EAL LF+E+ S P DVTMLS++ +C
Sbjct: 318 ETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC 377
Query: 269 ALLGALDLGRWIHEYVKK--KGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQA 328
A LGA+D+GRWIH Y+ K KG + T+LIDM+AKCG + A +F + + +
Sbjct: 378 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS 437
Query: 329 WSAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMS 388
W+AMI FA HG + +F M++ G++PD+ITF+GLL ACSH+G+++ GR F +M+
Sbjct: 438 WNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT 497
Query: 389 KNYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMA 448
++Y +TP ++HYGCM+DLLG +G EA I+ +E++P ++W +LL AC HGNV++
Sbjct: 498 QDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELG 557
Query: 449 KRVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNV 508
+ + + +++ + G YV+LSN+ A GRW +V R L+ D+G+ KVPGCSS+E+++V
Sbjct: 558 ESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSV 617
Query: 509 VHEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEK 568
VHEF GD H + E+ L+E+ ++ G+VPDTS V +MEEE KE LR+HSEK
Sbjct: 618 VHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQ-EMEEEWKEGALRHHSEK 677
Query: 569 LAMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLLSLIFGRQIVIRDVQRFHRFEDGKCS 600
LA+AFGL++T PGT + +VKNLR+C +CH KL+S I+ R+I+ RD RFH F DG CS
Sbjct: 678 LAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCS 737
BLAST of CcUC05G106580 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 486.9 bits (1252), Expect = 3.3e-136
Identity = 232/599 (38.73%), Postives = 362/599 (60.43%), Query Frame = 0
Query: 32 LSLLSKCTSLRELKQIQAYTMKTNLQNDISVLTKLINFCTLNPTISSMDHAHHLFDQIPD 91
+S L +C+ ELKQI A +KT L D +TK ++FC + + + +A +FD
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 92 KDIVLFNIMARGYARSNSPYLAFSLFAQLLCSGLLPDDYTFSSLLKACASSKALKEGMEL 151
D L+N+M RG++ S+ P + L+ ++LCS + YTF SLLKAC++ A +E ++
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 152 HCFAIKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQP 211
H KLG +++Y +LIN YA + A +FD + +P VS+N++I GY ++ +
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 212 N-------------------------------EALSLFRELQASNLEPTDVTMLSVIMSC 271
+ EAL LF E+Q S++EP +V++ + + +C
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 272 ALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWS 331
A LGAL+ G+WIH Y+ K + LIDM+AKCG + +A+ +F+ + + QAW+
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 332 AMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKN 391
A+I +A HG G +AIS F EM++ G++P+ ITF +L ACS+ GLVE+G+ FYSM ++
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377
Query: 392 YGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKR 451
Y + P I+HYGC+VDLLGR G LDEA FI E+ +KP ++W LL AC H N+++ +
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 437
Query: 452 VIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 511
+ + + +D HGG YV +N+ A +W+ R+LMK++GV KVPGCS++ + H
Sbjct: 438 IGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTH 497
Query: 512 EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA 571
EF +GD H +++ + ++++ GYVP+ + ++++ +E ++ HSEKLA
Sbjct: 498 EFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLA 557
Query: 572 MAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLLSLIFGRQIVIRDVQRFHRFEDGKCSC 600
+ +GL+ T PGT IR++KNLR+C DCH KL+S I+ R IV+RD RFH F DGKCSC
Sbjct: 558 ITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSC 616
BLAST of CcUC05G106580 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 476.5 bits (1225), Expect = 4.5e-133
Identity = 234/571 (40.98%), Postives = 363/571 (63.57%), Query Frame = 0
Query: 32 LSLLSKCTSLREL---KQIQAYTMKTNLQNDISVLTKLINFCTLNPTISSMDHAHHLFDQ 91
+S+L ++LR + K+I Y M++ + +++ T L++ + S++ A LFD
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD---MYAKCGSLETARQLFDG 299
Query: 92 IPDKDIVLFNIMARGYARSNSPYLAFSLFAQLLCSGLLPDDYTFSSLLKACASSKALKEG 151
+ ++++V +N M Y ++ +P A +F ++L G+ P D + L ACA L+ G
Sbjct: 300 MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 359
Query: 152 MELHCFAIKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARS 211
+H +++LGL+ N+ + +LI+MY +C +++ A +F +++ +VS+NA+I G+A++
Sbjct: 360 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQN 419
Query: 212 SQPNEALSLFRELQASNLEPTDVTMLSVIMSCALLGALDLGRWIHEYVKKKGFDKYVKVN 271
+P +AL+ F ++++ ++P T +SVI + A L +WIH V + DK V V
Sbjct: 420 GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT 479
Query: 272 TALIDMFAKCGSLTDAISIFEGMHVRDTQAWSAMIVAFATHGDGLKAISMFEEMKRAGVR 331
TAL+DM+AKCG++ A IF+ M R W+AMI + THG G A+ +FEEM++ ++
Sbjct: 480 TALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIK 539
Query: 332 PDEITFLGLLYACSHAGLVEQGRGYFYSMSKNYGITPGIKHYGCMVDLLGRTGRLDEAYN 391
P+ +TFL ++ ACSH+GLVE G FY M +NY I + HYG MVDLLGR GRL+EA++
Sbjct: 540 PNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWD 599
Query: 392 FIHELEIKPTPILWRTLLSACSTHGNVDMAKRVIDRIFELDDSHGGDYVILSNLCARVGR 451
FI ++ +KP ++ +L AC H NV+ A++ +R+FEL+ GG +V+L+N+
Sbjct: 600 FIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASM 659
Query: 452 WEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCISVELRRALDELIKEIKL 511
WE V +R M +G+ K PGCS VE+ N VH FFSG H S ++ L++LI IK
Sbjct: 660 WEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKE 719
Query: 512 VGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLRICGDCHN 571
GYVPDT+LV +E + KE +L HSEKLA++FGLLNT GTTI V KNLR+C DCHN
Sbjct: 720 AGYVPDTNLV--LGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHN 779
Query: 572 TAKLLSLIFGRQIVIRDVQRFHRFEDGKCSC 600
K +SL+ GR+IV+RD+QRFH F++G CSC
Sbjct: 780 ATKYISLVTGREIVVRDMQRFHHFKNGACSC 805
BLAST of CcUC05G106580 vs. ExPASy Swiss-Prot
Match:
Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)
HSP 1 Score: 473.8 bits (1218), Expect = 2.9e-132
Identity = 241/623 (38.68%), Postives = 370/623 (59.39%), Query Frame = 0
Query: 30 HPLSL---LSKCTSLRELKQIQAYTMKTNLQNDISVLTKLINFC-TLNPTISSMDHAHHL 89
HP SL ++ C ++R+L QI A +K+ D +++ FC T + +D+AH +
Sbjct: 22 HPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKI 81
Query: 90 FDQIPDKDIVLFNIMARGYARS--NSPYLAFSLFAQLLCSGLL-PDDYTFSSLLKACASS 149
F+Q+P ++ +N + RG++ S + +A +LF +++ + P+ +TF S+LKACA +
Sbjct: 82 FNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKT 141
Query: 150 KALKEGMELHCFAIKLGLNHNIYICPTLINMYAEC------------------------- 209
++EG ++H A+K G + ++ L+ MY C
Sbjct: 142 GKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDR 201
Query: 210 --------------------NDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSL 269
D AAR +FD+M Q +VS+N +I+GY+ + +A+ +
Sbjct: 202 RKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEV 261
Query: 270 FRELQASNLEPTDVTMLSVIMSCALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAK 329
FRE++ ++ P VT++SV+ + + LG+L+LG W+H Y + G + +ALIDM++K
Sbjct: 262 FREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSK 321
Query: 330 CGSLTDAISIFEGMHVRDTQAWSAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGL 389
CG + AI +FE + + WSAMI FA HG AI F +M++AGVRP ++ ++ L
Sbjct: 322 CGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL 381
Query: 390 LYACSHAGLVEQGRGYFYSMSKNYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKP 449
L ACSH GLVE+GR YF M G+ P I+HYGCMVDLLGR+G LDEA FI + IKP
Sbjct: 382 LTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKP 441
Query: 450 TPILWRTLLSACSTHGNVDMAKRVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRK 509
++W+ LL AC GNV+M KRV + + ++ G YV LSN+ A G W +V+ +R
Sbjct: 442 DDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRL 501
Query: 510 LMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSL 569
MK++ + K PGCS ++++ V+HEF D H + E+ L E+ +++L GY P T+
Sbjct: 502 RMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQ 561
Query: 570 VYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLLSLIF 601
V ++EEE KE VL YHSEK+A AFGL++T PG IR+VKNLRIC DCH++ KL+S ++
Sbjct: 562 VL-LNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVY 621
BLAST of CcUC05G106580 vs. ExPASy TrEMBL
Match:
A0A5A7STH8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00400 PE=3 SV=1)
HSP 1 Score: 1156.4 bits (2990), Expect = 0.0e+00
Identity = 559/600 (93.17%), Postives = 584/600 (97.33%), Query Frame = 0
Query: 1 MPVSCIPTCQFTLTKPSSTFSKNEF-MNPPHPLSLLSKCTSLRELKQIQAYTMKTNLQND 60
M +SCIPTCQFTLTKPSSTFSKNEF +N HPLSLLSKCTSL+ELKQIQAYT+KTNLQ+D
Sbjct: 1 MAISCIPTCQFTLTKPSSTFSKNEFVINQLHPLSLLSKCTSLKELKQIQAYTIKTNLQSD 60
Query: 61 ISVLTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQ 120
ISVLTKLINFCTLNPT S MDHAHHLFDQI DKDI+LFNIMARGYARSNSPYLAFSLFAQ
Sbjct: 61 ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFAQ 120
Query: 121 LLCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECND 180
LLCSGLLPDDYTFSSLLKACASSKAL++GM LHCFA+KLGLNHNIYICPTLINMYAECND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALRQGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180
Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMS 240
MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQAS++EPTDVTMLSVIMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASDIEPTDVTMLSVIMS 240
Query: 241 CALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAW 300
CALLGALDLG+WIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGM VRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300
Query: 301 SAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
SAMIVAFATHGDGLK+IS+FEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMS+
Sbjct: 301 SAMIVAFATHGDGLKSISIFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSR 360
Query: 361 NYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAK 420
YGITPGIKHYGCMVDLLGRTG LDEAYNF+ ELEIKPTPILWRTLLSACSTHGNV+MAK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRTGCLDEAYNFVDELEIKPTPILWRTLLSACSTHGNVEMAK 420
Query: 421 RVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
RVI+RIFELDDSHGGDYVILSNL ARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDSHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
Query: 481 HEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
HEFFSGDGVHC+SVELRRALDEL+KEIKLVGY+PDTSLVYHADM+EEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYIPDTSLVYHADMDEEGKELVLRYHSEKL 540
Query: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLLSLIFGRQIVIRDVQRFHRFEDGKCSC 600
AMAFGLLNTPPGTTIRV KNLRICGDCHN AKL+S IFGR+IVIRDVQRFH+FEDGKCSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHQFEDGKCSC 600
BLAST of CcUC05G106580 vs. ExPASy TrEMBL
Match:
A0A1S3BFK0 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489124 PE=3 SV=1)
HSP 1 Score: 1156.4 bits (2990), Expect = 0.0e+00
Identity = 559/600 (93.17%), Postives = 584/600 (97.33%), Query Frame = 0
Query: 1 MPVSCIPTCQFTLTKPSSTFSKNEF-MNPPHPLSLLSKCTSLRELKQIQAYTMKTNLQND 60
M +SCIPTCQFTLTKPSSTFSKNEF +N HPLSLLSKCTSL+ELKQIQAYT+KTNLQ+D
Sbjct: 1 MAISCIPTCQFTLTKPSSTFSKNEFVINQLHPLSLLSKCTSLKELKQIQAYTIKTNLQSD 60
Query: 61 ISVLTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQ 120
ISVLTKLINFCTLNPT S MDHAHHLFDQI DKDI+LFNIMARGYARSNSPYLAFSLFAQ
Sbjct: 61 ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFAQ 120
Query: 121 LLCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECND 180
LLCSGLLPDDYTFSSLLKACASSKAL++GM LHCFA+KLGLNHNIYICPTLINMYAECND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALRQGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180
Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMS 240
MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQAS++EPTDVTMLSVIMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASDIEPTDVTMLSVIMS 240
Query: 241 CALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAW 300
CALLGALDLG+WIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGM VRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300
Query: 301 SAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
SAMIVAFATHGDGLK+IS+FEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMS+
Sbjct: 301 SAMIVAFATHGDGLKSISIFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSR 360
Query: 361 NYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAK 420
YGITPGIKHYGCMVDLLGRTG LDEAYNF+ ELEIKPTPILWRTLLSACSTHGNV+MAK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRTGCLDEAYNFVDELEIKPTPILWRTLLSACSTHGNVEMAK 420
Query: 421 RVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
RVI+RIFELDDSHGGDYVILSNL ARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDSHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
Query: 481 HEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
HEFFSGDGVHC+SVELRRALDEL+KEIKLVGY+PDTSLVYHADM+EEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYIPDTSLVYHADMDEEGKELVLRYHSEKL 540
Query: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLLSLIFGRQIVIRDVQRFHRFEDGKCSC 600
AMAFGLLNTPPGTTIRV KNLRICGDCHN AKL+S IFGR+IVIRDVQRFH+FEDGKCSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHQFEDGKCSC 600
BLAST of CcUC05G106580 vs. ExPASy TrEMBL
Match:
A0A0A0KU15 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605160 PE=3 SV=1)
HSP 1 Score: 1152.5 bits (2980), Expect = 0.0e+00
Identity = 559/600 (93.17%), Postives = 578/600 (96.33%), Query Frame = 0
Query: 1 MPVSCIPTCQFTLTKPSSTFSKNEF-MNPPHPLSLLSKCTSLRELKQIQAYTMKTNLQND 60
M +SCIPTCQFTLTKPSS FSKNEF +N HPLSLLSKCTSL ELKQIQAYT+KTNLQ+D
Sbjct: 1 MAISCIPTCQFTLTKPSSAFSKNEFVINQLHPLSLLSKCTSLNELKQIQAYTIKTNLQSD 60
Query: 61 ISVLTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQ 120
ISVLTKLINFCTLNPT S MDHAHHLFDQI DKDI+LFNIMARGYARSNSPYLAFSLF +
Sbjct: 61 ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGE 120
Query: 121 LLCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECND 180
LLCSGLLPDDYTFSSLLKACASSKAL+EGM LHCFA+KLGLNHNIYICPTLINMYAECND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180
Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMS 240
MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASN+EPTDVTMLSVIMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240
Query: 241 CALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAW 300
CALLGALDLG+WIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGM VRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300
Query: 301 SAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
SAMIVAFATHGDGLKAISMFEEMKR GVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK
Sbjct: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
Query: 361 NYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAK 420
YGITPGIKHYGCMVDLLGR G LDEAYNF+ +LEIK TPILWRTLLSACSTHGNV+MAK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAK 420
Query: 421 RVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
RVI+RIFELDD+HGGDYVILSNL ARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
Query: 481 HEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
HEFFSGDGVHC+SVELRRALDEL+KEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
Query: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLLSLIFGRQIVIRDVQRFHRFEDGKCSC 600
AMAFGLLNTPPGTTIRV KNLRICGDCHN AKL+S IFGR+IVIRDVQRFHRFEDGKCSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600
BLAST of CcUC05G106580 vs. ExPASy TrEMBL
Match:
A0A6J1DA68 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019083 PE=3 SV=1)
HSP 1 Score: 1128.6 bits (2918), Expect = 0.0e+00
Identity = 544/599 (90.82%), Postives = 569/599 (94.99%), Query Frame = 0
Query: 1 MPVSCIPTCQFTLTKPSSTFSKNEFMNPPHPLSLLSKCTSLRELKQIQAYTMKTNLQNDI 60
M +SCIP+CQFTL KP+S F NEF NPPHPL LLSKCTSLRELKQIQA+T+KTNLQNDI
Sbjct: 1 MGISCIPSCQFTLAKPNSAFPNNEFTNPPHPLFLLSKCTSLRELKQIQAFTIKTNLQNDI 60
Query: 61 SVLTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQL 120
SVLTK+INFCTLNP+ SSMDHAHHLFDQIPDKDIVLFNIMARGYARSN+PYLAFSLF+Q+
Sbjct: 61 SVLTKIINFCTLNPSTSSMDHAHHLFDQIPDKDIVLFNIMARGYARSNTPYLAFSLFSQV 120
Query: 121 LCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDM 180
LCSGLLPDDYTFSSLLKACASSKA EG +LHCFAIKLGLNHNIYICP+LIN+YAECNDM
Sbjct: 121 LCSGLLPDDYTFSSLLKACASSKAFSEGRQLHCFAIKLGLNHNIYICPSLINLYAECNDM 180
Query: 181 NAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSC 240
NAARGVFDEME PCIVSYNAIITG+ARSSQPNEALSLFRELQASNLEPTDVTMLS+IMSC
Sbjct: 181 NAARGVFDEMEAPCIVSYNAIITGHARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSC 240
Query: 241 ALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWS 300
ALLGALDLGRWIHEYVKKKGFDK+VKVNTALIDM+AKCGSL DAISIFE M VRDTQAWS
Sbjct: 241 ALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSLVDAISIFEDMRVRDTQAWS 300
Query: 301 AMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKN 360
AMIVA+ATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVE+GRGYF SMSK
Sbjct: 301 AMIVAYATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEEGRGYFNSMSKY 360
Query: 361 YGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKR 420
YGI PGIKHYGCMVDLLGRTG LDEAY FI EIKPTPILWRTLLSACS GNVD+AKR
Sbjct: 361 YGIAPGIKHYGCMVDLLGRTGHLDEAYKFIDGSEIKPTPILWRTLLSACSNRGNVDLAKR 420
Query: 421 VIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 480
VI+RIFELDDSHGGDYVILSNLCARVGRWEDVNH+RKLMKDRGVVKVPGCSSVEVNNVVH
Sbjct: 421 VIERIFELDDSHGGDYVILSNLCARVGRWEDVNHIRKLMKDRGVVKVPGCSSVEVNNVVH 480
Query: 481 EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA 540
EFFSGDGVH ISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA
Sbjct: 481 EFFSGDGVHSISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA 540
Query: 541 MAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLLSLIFGRQIVIRDVQRFHRFEDGKCSC 600
+AFGLLN+PPGT IRVVKNLRICGDCH AKL+S IFGRQIVIRDVQRFHRFEDGKCSC
Sbjct: 541 IAFGLLNSPPGTPIRVVKNLRICGDCHTAAKLISFIFGRQIVIRDVQRFHRFEDGKCSC 599
BLAST of CcUC05G106580 vs. ExPASy TrEMBL
Match:
A0A6J1HTT7 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467412 PE=3 SV=1)
HSP 1 Score: 1117.4 bits (2889), Expect = 0.0e+00
Identity = 541/599 (90.32%), Postives = 565/599 (94.32%), Query Frame = 0
Query: 1 MPVSCIPTCQFTLTKPSSTFSKNEFMNPPHPLSLLSKCTSLRELKQIQAYTMKTNLQNDI 60
M +SCIPTCQF LTKP KNEF+N PHPLSL SKC SLRELKQIQAYT+KTNL NDI
Sbjct: 1 MAISCIPTCQFALTKP-----KNEFINQPHPLSLFSKCASLRELKQIQAYTIKTNLHNDI 60
Query: 61 SVLTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQL 120
SVLTKLINFCT PT SSMDHAHHLFD++ DKDIVLFNIMARGYARSNSPYL FSLFAQ+
Sbjct: 61 SVLTKLINFCTRYPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQV 120
Query: 121 LCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDM 180
LCSGLLPDDYTFSSLLKACA SKAL+EG +LHCFAIKLG HNIYICPTLINMYA CNDM
Sbjct: 121 LCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGFGHNIYICPTLINMYAACNDM 180
Query: 181 NAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSC 240
NAARGVFD ME+PCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLS+IMSC
Sbjct: 181 NAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSC 240
Query: 241 ALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWS 300
ALLGALDLGRWIHEYVKKKGFDK+VKVNTALIDM+AKCGS+ DAISIFEGM VRDTQAWS
Sbjct: 241 ALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWS 300
Query: 301 AMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKN 360
AMIVA+ATHGDGLKAISMFEEMK+AGVRPDEITFLGLLYACSHAGLVE+GRGYFYSM KN
Sbjct: 301 AMIVAYATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVEEGRGYFYSMYKN 360
Query: 361 YGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKR 420
+G+TPGIKHYGCMVDLLGRTGRLDEAY FI EL IKPTPILWRTLLSACS HGNVD+AKR
Sbjct: 361 HGMTPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKR 420
Query: 421 VIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 480
VI+RIFELDDSHGGDYVILSNLCAR+GRWEDVN LRKLMKDRGVVKVPGCSSVEVNNVVH
Sbjct: 421 VIERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVVKVPGCSSVEVNNVVH 480
Query: 481 EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA 540
EFFSGDGVH ISVELRRALDELI+EIKL GYVPDTSLVYHADMEEE KELVLRYHSEKLA
Sbjct: 481 EFFSGDGVHSISVELRRALDELIQEIKLAGYVPDTSLVYHADMEEEAKELVLRYHSEKLA 540
Query: 541 MAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLLSLIFGRQIVIRDVQRFHRFEDGKCSC 600
MAFGLLNTPPGTTIRVVKNLRICGDCHN AKL+SLIFGRQIVIRDVQRFHRFEDG+CSC
Sbjct: 541 MAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSC 594
BLAST of CcUC05G106580 vs. TAIR 10
Match:
AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 822.0 bits (2122), Expect = 3.1e-238
Identity = 386/589 (65.53%), Postives = 479/589 (81.32%), Query Frame = 0
Query: 11 FTLTKPSSTFSKNEFMNPPHPLSLLSKCTSLRELKQIQAYTMKTNLQNDISVLTKLINFC 70
F+ + + SK + +N +P+ L+SKC SLREL QIQAY +K++++ D+S + KLINFC
Sbjct: 12 FSHAETFTKHSKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFC 71
Query: 71 TLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQLLCSGLLPDDY 130
T +PT SSM +A HLF+ + + DIV+FN MARGY+R +P FSLF ++L G+LPD+Y
Sbjct: 72 TESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNY 131
Query: 131 TFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDMNAARGVFDEM 190
TF SLLKACA +KAL+EG +LHC ++KLGL+ N+Y+CPTLINMY EC D+++AR VFD +
Sbjct: 132 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI 191
Query: 191 EQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSCALLGALDLGR 250
+PC+V YNA+ITGYAR ++PNEALSLFRE+Q L+P ++T+LSV+ SCALLG+LDLG+
Sbjct: 192 VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK 251
Query: 251 WIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWSAMIVAFATHG 310
WIH+Y KK F KYVKVNTALIDMFAKCGSL DA+SIFE M +DTQAWSAMIVA+A HG
Sbjct: 252 WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHG 311
Query: 311 DGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKNYGITPGIKHY 370
K++ MFE M+ V+PDEITFLGLL ACSH G VE+GR YF M +GI P IKHY
Sbjct: 312 KAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHY 371
Query: 371 GCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKRVIDRIFELDD 430
G MVDLL R G L++AY FI +L I PTP+LWR LL+ACS+H N+D+A++V +RIFELDD
Sbjct: 372 GSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDD 431
Query: 431 SHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHC 490
SHGGDYVILSNL AR +WE V+ LRK+MKDR VKVPGCSS+EVNNVVHEFFSGDGV
Sbjct: 432 SHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKS 491
Query: 491 ISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPP 550
+ +L RALDE++KE+KL GYVPDTS+V HA+M ++ KE+ LRYHSEKLA+ FGLLNTPP
Sbjct: 492 ATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPP 551
Query: 551 GTTIRVVKNLRICGDCHNTAKLLSLIFGRQIVIRDVQRFHRFEDGKCSC 600
GTTIRVVKNLR+C DCHN AKL+SLIFGR++V+RDVQRFH FEDGKCSC
Sbjct: 552 GTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSC 599
BLAST of CcUC05G106580 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 488.0 bits (1255), Expect = 1.1e-137
Identity = 237/601 (39.43%), Postives = 367/601 (61.06%), Query Frame = 0
Query: 29 PHPLSLLSKCTSLRELKQIQAYTMKTNLQNDISVLTKLINFCTLNPTISS---------- 88
P L +K + +E +QI + +K D+ V T LI+ N +
Sbjct: 138 PFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH 197
Query: 89 ------------------MDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQL 148
+++A LFD+IP KD+V +N M GYA + + A LF +
Sbjct: 198 RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257
Query: 149 LCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDM 208
+ + + PD+ T +++ ACA S +++ G ++H + G N+ I LI++Y++C ++
Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 209 NAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSC 268
A G+F+ + ++S+N +I GY + EAL LF+E+ S P DVTMLS++ +C
Sbjct: 318 ETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC 377
Query: 269 ALLGALDLGRWIHEYVKK--KGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQA 328
A LGA+D+GRWIH Y+ K KG + T+LIDM+AKCG + A +F + + +
Sbjct: 378 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS 437
Query: 329 WSAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMS 388
W+AMI FA HG + +F M++ G++PD+ITF+GLL ACSH+G+++ GR F +M+
Sbjct: 438 WNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT 497
Query: 389 KNYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMA 448
++Y +TP ++HYGCM+DLLG +G EA I+ +E++P ++W +LL AC HGNV++
Sbjct: 498 QDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELG 557
Query: 449 KRVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNV 508
+ + + +++ + G YV+LSN+ A GRW +V R L+ D+G+ KVPGCSS+E+++V
Sbjct: 558 ESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSV 617
Query: 509 VHEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEK 568
VHEF GD H + E+ L+E+ ++ G+VPDTS V +MEEE KE LR+HSEK
Sbjct: 618 VHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQ-EMEEEWKEGALRHHSEK 677
Query: 569 LAMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLLSLIFGRQIVIRDVQRFHRFEDGKCS 600
LA+AFGL++T PGT + +VKNLR+C +CH KL+S I+ R+I+ RD RFH F DG CS
Sbjct: 678 LAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCS 737
BLAST of CcUC05G106580 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 486.9 bits (1252), Expect = 2.4e-137
Identity = 232/599 (38.73%), Postives = 362/599 (60.43%), Query Frame = 0
Query: 32 LSLLSKCTSLRELKQIQAYTMKTNLQNDISVLTKLINFCTLNPTISSMDHAHHLFDQIPD 91
+S L +C+ ELKQI A +KT L D +TK ++FC + + + +A +FD
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 92 KDIVLFNIMARGYARSNSPYLAFSLFAQLLCSGLLPDDYTFSSLLKACASSKALKEGMEL 151
D L+N+M RG++ S+ P + L+ ++LCS + YTF SLLKAC++ A +E ++
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 152 HCFAIKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQP 211
H KLG +++Y +LIN YA + A +FD + +P VS+N++I GY ++ +
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 212 N-------------------------------EALSLFRELQASNLEPTDVTMLSVIMSC 271
+ EAL LF E+Q S++EP +V++ + + +C
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 272 ALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWS 331
A LGAL+ G+WIH Y+ K + LIDM+AKCG + +A+ +F+ + + QAW+
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 332 AMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKN 391
A+I +A HG G +AIS F EM++ G++P+ ITF +L ACS+ GLVE+G+ FYSM ++
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377
Query: 392 YGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKR 451
Y + P I+HYGC+VDLLGR G LDEA FI E+ +KP ++W LL AC H N+++ +
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 437
Query: 452 VIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 511
+ + + +D HGG YV +N+ A +W+ R+LMK++GV KVPGCS++ + H
Sbjct: 438 IGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTH 497
Query: 512 EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA 571
EF +GD H +++ + ++++ GYVP+ + ++++ +E ++ HSEKLA
Sbjct: 498 EFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLA 557
Query: 572 MAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLLSLIFGRQIVIRDVQRFHRFEDGKCSC 600
+ +GL+ T PGT IR++KNLR+C DCH KL+S I+ R IV+RD RFH F DGKCSC
Sbjct: 558 ITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSC 616
BLAST of CcUC05G106580 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 476.5 bits (1225), Expect = 3.2e-134
Identity = 234/571 (40.98%), Postives = 363/571 (63.57%), Query Frame = 0
Query: 32 LSLLSKCTSLREL---KQIQAYTMKTNLQNDISVLTKLINFCTLNPTISSMDHAHHLFDQ 91
+S+L ++LR + K+I Y M++ + +++ T L++ + S++ A LFD
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD---MYAKCGSLETARQLFDG 299
Query: 92 IPDKDIVLFNIMARGYARSNSPYLAFSLFAQLLCSGLLPDDYTFSSLLKACASSKALKEG 151
+ ++++V +N M Y ++ +P A +F ++L G+ P D + L ACA L+ G
Sbjct: 300 MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 359
Query: 152 MELHCFAIKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARS 211
+H +++LGL+ N+ + +LI+MY +C +++ A +F +++ +VS+NA+I G+A++
Sbjct: 360 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQN 419
Query: 212 SQPNEALSLFRELQASNLEPTDVTMLSVIMSCALLGALDLGRWIHEYVKKKGFDKYVKVN 271
+P +AL+ F ++++ ++P T +SVI + A L +WIH V + DK V V
Sbjct: 420 GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT 479
Query: 272 TALIDMFAKCGSLTDAISIFEGMHVRDTQAWSAMIVAFATHGDGLKAISMFEEMKRAGVR 331
TAL+DM+AKCG++ A IF+ M R W+AMI + THG G A+ +FEEM++ ++
Sbjct: 480 TALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIK 539
Query: 332 PDEITFLGLLYACSHAGLVEQGRGYFYSMSKNYGITPGIKHYGCMVDLLGRTGRLDEAYN 391
P+ +TFL ++ ACSH+GLVE G FY M +NY I + HYG MVDLLGR GRL+EA++
Sbjct: 540 PNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWD 599
Query: 392 FIHELEIKPTPILWRTLLSACSTHGNVDMAKRVIDRIFELDDSHGGDYVILSNLCARVGR 451
FI ++ +KP ++ +L AC H NV+ A++ +R+FEL+ GG +V+L+N+
Sbjct: 600 FIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASM 659
Query: 452 WEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCISVELRRALDELIKEIKL 511
WE V +R M +G+ K PGCS VE+ N VH FFSG H S ++ L++LI IK
Sbjct: 660 WEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKE 719
Query: 512 VGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLRICGDCHN 571
GYVPDT+LV +E + KE +L HSEKLA++FGLLNT GTTI V KNLR+C DCHN
Sbjct: 720 AGYVPDTNLV--LGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHN 779
Query: 572 TAKLLSLIFGRQIVIRDVQRFHRFEDGKCSC 600
K +SL+ GR+IV+RD+QRFH F++G CSC
Sbjct: 780 ATKYISLVTGREIVVRDMQRFHHFKNGACSC 805
BLAST of CcUC05G106580 vs. TAIR 10
Match:
AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 473.8 bits (1218), Expect = 2.1e-133
Identity = 241/623 (38.68%), Postives = 370/623 (59.39%), Query Frame = 0
Query: 30 HPLSL---LSKCTSLRELKQIQAYTMKTNLQNDISVLTKLINFC-TLNPTISSMDHAHHL 89
HP SL ++ C ++R+L QI A +K+ D +++ FC T + +D+AH +
Sbjct: 22 HPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKI 81
Query: 90 FDQIPDKDIVLFNIMARGYARS--NSPYLAFSLFAQLLCSGLL-PDDYTFSSLLKACASS 149
F+Q+P ++ +N + RG++ S + +A +LF +++ + P+ +TF S+LKACA +
Sbjct: 82 FNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKT 141
Query: 150 KALKEGMELHCFAIKLGLNHNIYICPTLINMYAEC------------------------- 209
++EG ++H A+K G + ++ L+ MY C
Sbjct: 142 GKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDR 201
Query: 210 --------------------NDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSL 269
D AAR +FD+M Q +VS+N +I+GY+ + +A+ +
Sbjct: 202 RKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEV 261
Query: 270 FRELQASNLEPTDVTMLSVIMSCALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAK 329
FRE++ ++ P VT++SV+ + + LG+L+LG W+H Y + G + +ALIDM++K
Sbjct: 262 FREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSK 321
Query: 330 CGSLTDAISIFEGMHVRDTQAWSAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGL 389
CG + AI +FE + + WSAMI FA HG AI F +M++AGVRP ++ ++ L
Sbjct: 322 CGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL 381
Query: 390 LYACSHAGLVEQGRGYFYSMSKNYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKP 449
L ACSH GLVE+GR YF M G+ P I+HYGCMVDLLGR+G LDEA FI + IKP
Sbjct: 382 LTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKP 441
Query: 450 TPILWRTLLSACSTHGNVDMAKRVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRK 509
++W+ LL AC GNV+M KRV + + ++ G YV LSN+ A G W +V+ +R
Sbjct: 442 DDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRL 501
Query: 510 LMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSL 569
MK++ + K PGCS ++++ V+HEF D H + E+ L E+ +++L GY P T+
Sbjct: 502 RMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQ 561
Query: 570 VYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLLSLIF 601
V ++EEE KE VL YHSEK+A AFGL++T PG IR+VKNLRIC DCH++ KL+S ++
Sbjct: 562 VL-LNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVY 621
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038893049.1 | 0.0e+00 | 94.49 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Benincasa ... | [more] |
XP_008446357.1 | 0.0e+00 | 93.17 | PREDICTED: pentatricopeptide repeat-containing protein At2g02980, chloroplastic ... | [more] |
XP_031742214.1 | 0.0e+00 | 93.17 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucumis sa... | [more] |
XP_022151060.1 | 0.0e+00 | 90.82 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic isoform X1 ... | [more] |
XP_023541252.1 | 0.0e+00 | 90.98 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Q8LK93 | 4.4e-237 | 65.53 | Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop... | [more] |
Q9LN01 | 1.5e-136 | 39.43 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9FJY7 | 3.3e-136 | 38.73 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Q3E6Q1 | 4.5e-133 | 40.98 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q9FI80 | 2.9e-132 | 38.68 | Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7STH8 | 0.0e+00 | 93.17 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BFK0 | 0.0e+00 | 93.17 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucumis ... | [more] |
A0A0A0KU15 | 0.0e+00 | 93.17 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G6051... | [more] |
A0A6J1DA68 | 0.0e+00 | 90.82 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic isoform X1 ... | [more] |
A0A6J1HTT7 | 0.0e+00 | 90.32 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucurbit... | [more] |
Match Name | E-value | Identity | Description | |
AT2G02980.1 | 3.1e-238 | 65.53 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08070.1 | 1.1e-137 | 39.43 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G66520.1 | 2.4e-137 | 38.73 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G11290.1 | 3.2e-134 | 40.98 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G48910.1 | 2.1e-133 | 38.68 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |