CcUC05G106250 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G106250
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	cell division topological specificity factor homolog, chloroplastic
Location	CicolChr05: 33511129 .. 33512540 (+)
RNA-Seq Expression	CcUC05G106250
Synteny	CcUC05G106250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATTCCTGGAGATCCAATGGCTTTTCCAACACTAGCGTCTTCTTATCCACGGCGTTCTCCGACGTCATTTCATCCTCTCAAGGTCTGAAAATCAGTTTTCCTCTTGAGTTCCACTTCTCTATTACTGAACTTCCTTATCTTCATTTTCATCCGAGTCTGTTGCCATTCGTCAAATGCATCTCCATTTCTCCAACAATTGCATGGAATTGACATATATTTGTGGAATAAGGAACTAGGTTAGTCGTTAGCCTTGCAACTGGCCTTTTAATTGATATCCACCATGTCTATAGTTTGCTAGTTATTACTTTCTGGAATCTGATTTTGTGGTTAGCCTTTCCGTCATTTTTTACTCGTTTAATCGCTTCTCCAGATCTTTAGTAGTTTTATTTGTCGATTTGAAGTCACCAATTCTTGATGACGCTTTGGCTCCAGGTTTCCCTGATTATCAGGCTTGAATTTCAATAGTTGAAATCGCTTGGACTCTATTTCTTGATAGTTGCAACATCTATGCTACTACTGGTTTGGTTTCTCCCAAGTTGCGTCGTTGGTGTACCTATAAATTTTTCTCATATTACTCAAGTACAAGGTGCTATGTTTCTTATGCGATGTTTATAGATGTTGTTAGGCCTAAAACCTGGCGTTAATTCATTTTTGGTTCTGGAGAGAATCCAACACTTTTGCTCAAATTTTACTGAATCTTCTGTATAGCGATTGATATGGAGAAAATTTAGAATGCAGGAGGAACCTTCTCGAAAACTTGCAAAACGGCTTTGTTTAATTTGAGATTCTTGTACTGCACTGCAGGTGGACCTCTCCAGTTCTATTTATAGAAGAGTTGGAAGTAAAGGAATAAAGCCAAAAAAGCATACCATGGCACATGAAAATGATAGCATACACAGTATCTCCCTGGAAGATGTTGAGCGCTCAGCAAATTATGAACGATCGCCAAAATCCTTAAGTCAAGACAGCTTCATCCTCAGTTCCATGAACATGAACTTTTTGGAACGATTAATATTGGCTTGGAGGATAGTTTTTCCACCAACATCAACACCTAAATTGAACTCTAATGCTATGATAGCCAAGCAGCGGTTGAAGATGATTCTCTTGTCCGATCGATGTGCAGTGAATGACGAAGCTAAACAAAAGATTGTGGACAACATCTTGAGTACTCTTTCAGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTTAGATTTCAGAACAATTTACTCTGTAACGGTGCCTGTGCGAATGGTGAAGGCTGAATATCAAGGCAGTGAGGAGGTTGAAGCAACCACGAATACAGACTTGAAAGATGATGGAGAAGGATCTGCCTCCGCAGGTCTCATTTTCGATTCGTTAATTGCAGATGGAAAAGGTTCTTAA

mRNA sequence

ATGGCGATTCCTGGAGATCCAATGGCTTTTCCAACACTAGCGTCTTCTTATCCACGGCGTTCTCCGACGTCATTTCATCCTCTCAAGGTGGACCTCTCCAGTTCTATTTATAGAAGAGTTGGAAGTAAAGGAATAAAGCCAAAAAAGCATACCATGGCACATGAAAATGATAGCATACACAGTATCTCCCTGGAAGATGTTGAGCGCTCAGCAAATTATGAACGATCGCCAAAATCCTTAAGTCAAGACAGCTTCATCCTCAGTTCCATGAACATGAACTTTTTGGAACGATTAATATTGGCTTGGAGGATAGTTTTTCCACCAACATCAACACCTAAATTGAACTCTAATGCTATGATAGCCAAGCAGCGGTTGAAGATGATTCTCTTGTCCGATCGATGTGCAGTGAATGACGAAGCTAAACAAAAGATTGTGGACAACATCTTGAGTACTCTTTCAGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTTAGATTTCAGAACAATTTACTCTGTAACGGTGCCTGTGCGAATGGTGAAGGCTGAATATCAAGGCAGTGAGGAGGTTGAAGCAACCACGAATACAGACTTGAAAGATGATGGAGAAGGATCTGCCTCCGCAGGTCTCATTTTCGATTCGTTAATTGCAGATGGAAAAGGTTCTTAA

Coding sequence (CDS)

ATGGCGATTCCTGGAGATCCAATGGCTTTTCCAACACTAGCGTCTTCTTATCCACGGCGTTCTCCGACGTCATTTCATCCTCTCAAGGTGGACCTCTCCAGTTCTATTTATAGAAGAGTTGGAAGTAAAGGAATAAAGCCAAAAAAGCATACCATGGCACATGAAAATGATAGCATACACAGTATCTCCCTGGAAGATGTTGAGCGCTCAGCAAATTATGAACGATCGCCAAAATCCTTAAGTCAAGACAGCTTCATCCTCAGTTCCATGAACATGAACTTTTTGGAACGATTAATATTGGCTTGGAGGATAGTTTTTCCACCAACATCAACACCTAAATTGAACTCTAATGCTATGATAGCCAAGCAGCGGTTGAAGATGATTCTCTTGTCCGATCGATGTGCAGTGAATGACGAAGCTAAACAAAAGATTGTGGACAACATCTTGAGTACTCTTTCAGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTTAGATTTCAGAACAATTTACTCTGTAACGGTGCCTGTGCGAATGGTGAAGGCTGAATATCAAGGCAGTGAGGAGGTTGAAGCAACCACGAATACAGACTTGAAAGATGATGGAGAAGGATCTGCCTCCGCAGGTCTCATTTTCGATTCGTTAATTGCAGATGGAAAAGGTTCTTAA

Protein sequence

MAIPGDPMAFPTLASSYPRRSPTSFHPLKVDLSSSIYRRVGSKGIKPKKHTMAHENDSIHSISLEDVERSANYERSPKSLSQDSFILSSMNMNFLERLILAWRIVFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDFRTIYSVTVPVRMVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKGS

Homology

[Close]

BLAST of CcUC05G106250 vs. NCBI nr
Match: XP_008446409.1 (PREDICTED: cell division topological specificity factor homolog, chloroplastic [Cucumis melo] >KAA0034453.1 cell division topological specificity factor-like protein [Cucumis melo var. makuwa] >TYK17681.1 cell division topological specificity factor-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 355.9 bits (912), Expect = 2.6e-94
Identity = 189/229 (82.53%), Postives = 201/229 (87.77%), Query Frame = 0


Query: 1   MAIPGDPMAFPTLASSYPRRSPTSFHPLKVDLSSSIYRRVGSKGIKPKKHTMAHENDSIH 60
           MAIP DP AF TL S YPRRSP S HP K D SS ++RR G+KG +PK HTMAHENDS+H
Sbjct: 1   MAIPADPRAFATLGSCYPRRSPASLHPRKADFSSFVHRRYGNKGTRPKWHTMAHENDSLH 60

Query: 61  SISLEDVERSANYERSPKSLSQDSFILSSMNMNFLERLILAWRIVFPPTSTPKLNSNAMI 120
           SISLE+VE SA YE+S KSLSQ+SFILSSMNMNFLERL LAWRI+F P+S PK+ SNA I
Sbjct: 61  SISLENVENSAKYEQSSKSLSQESFILSSMNMNFLERLKLAWRIIF-PSSAPKMKSNATI 120

Query: 121 AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDFRTIYSV 180
           AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLD RTIYSV
Sbjct: 121 AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSV 180

Query: 181 TVPVRMVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKGS 230
           TVPVR VKAEYQGSEEV A TNTDLKDDGE S SAGLIFDSL+ADGKGS
Sbjct: 181 TVPVRRVKAEYQGSEEVGAITNTDLKDDGEESGSAGLIFDSLVADGKGS 228

[Close]

BLAST of CcUC05G106250 vs. NCBI nr
Match: XP_004135443.3 (cell division topological specificity factor homolog, chloroplastic [Cucumis sativus] >KAE8648758.1 hypothetical protein Csa_007843 [Cucumis sativus])

HSP 1 Score: 346.7 bits (888), Expect = 1.6e-91
Identity = 183/227 (80.62%), Postives = 198/227 (87.22%), Query Frame = 0


Query: 1   MAIPGDPMAFPTLASSYPRRSPTSFHPLKVDLSSSIYRRVGSKGIKPKKHTMAHENDSIH 60
           MAIP DP AF TL+S YPRRSP   HP K DLSS ++RR G+KG +PK HTM+HENDS+H
Sbjct: 1   MAIPADPRAFATLSSCYPRRSPAFLHPRKADLSSFVHRRYGNKGTRPKWHTMSHENDSLH 60

Query: 61  SISLEDVERSANYERSPKSLSQDSFILSSMNMNFLERLILAWRIVFPPTSTPKLNSNAMI 120
           SISLE+VE S NYERS KSLS++SFILSSMNMNFLERL LAWRI+F P+S PK+ SNA I
Sbjct: 61  SISLENVESSENYERSSKSLSEESFILSSMNMNFLERLTLAWRIIF-PSSAPKMESNATI 120

Query: 121 AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDFRTIYSV 180
           AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLD RTIYSV
Sbjct: 121 AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSV 180

Query: 181 TVPVRMVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGK 228
           TVPVR VKAEYQGSEEV    NT+LKDDGE S SAGLIFDSL+ADGK
Sbjct: 181 TVPVRRVKAEYQGSEEVGEIANTNLKDDGEESGSAGLIFDSLVADGK 226

[Close]

BLAST of CcUC05G106250 vs. NCBI nr
Match: KAG6601459.1 (Cell division topological specificity factor-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 341.7 bits (875), Expect = 5.0e-90
Identity = 182/228 (79.82%), Postives = 200/228 (87.72%), Query Frame = 0


Query: 1   MAIPGDPMAFPTLASSYPRRSPTSFHPLKVDLSSSIYRRVGSKGIKPKKHTMAHENDSIH 60
           MA+PG P AF TL S YPR SP S HPLKVDLS  ++RR G+KGIKPK  TMAHEND+IH
Sbjct: 1   MAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDTIH 60

Query: 61  SISLEDVERSANYERSPKSLSQDSFILSSMNMNFLERLILAWRIVFPPTSTPKLNSNAMI 120
           SIS +DVE SA+YERSP+SLSQ+SFILSSM MNFLERLILAWRI+F P+ST K NSNAMI
Sbjct: 61  SISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIF-PSSTSKSNSNAMI 120

Query: 121 AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDFRTIYSV 180
           AKQRLKMILLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQFNVSTD D RTIYSV
Sbjct: 121 AKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSV 180

Query: 181 TVPVRMVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKG 229
           TVPVR VKA+YQGSEE+ AT NT+LKDDGE S SAG IFDSLIA+GKG
Sbjct: 181 TVPVRRVKADYQGSEEIGATINTELKDDGERSGSAGPIFDSLIAEGKG 227

[Close]

BLAST of CcUC05G106250 vs. NCBI nr
Match: XP_023551705.1 (cell division topological specificity factor homolog, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023551706.1 cell division topological specificity factor homolog, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 341.7 bits (875), Expect = 5.0e-90
Identity = 183/227 (80.62%), Postives = 199/227 (87.67%), Query Frame = 0


Query: 1   MAIPGDPMAFPTLASSYPRRSPTSFHPLKVDLSSSIYRRVGSKGIKPKKHTMAHENDSIH 60
           MA+PG P AF TL S YPR SP S HPLKVDLS  ++RR G+KGIKPK  TMAHENDSIH
Sbjct: 1   MAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIH 60

Query: 61  SISLEDVERSANYERSPKSLSQDSFILSSMNMNFLERLILAWRIVFPPTSTPKLNSNAMI 120
           SIS +DVE SA+YERSP+SLSQ+SFILSSM MNFLERLILAWRI+F P+ST K NSNAMI
Sbjct: 61  SISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIF-PSSTSKSNSNAMI 120

Query: 121 AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDFRTIYSV 180
           AKQRLKMILLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQFNVSTD D RTIYSV
Sbjct: 121 AKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSV 180

Query: 181 TVPVRMVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGK 228
           TVPVR VKA+YQGSEEV AT NT+LKDDGE S SAG IFDSLIA+GK
Sbjct: 181 TVPVRRVKADYQGSEEVGATINTELKDDGERSGSAGPIFDSLIAEGK 226

[Close]

BLAST of CcUC05G106250 vs. NCBI nr
Match: XP_022996852.1 (cell division topological specificity factor homolog, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 337.8 bits (865), Expect = 7.3e-89
Identity = 181/228 (79.39%), Postives = 198/228 (86.84%), Query Frame = 0


Query: 1   MAIPGDPMAFPTLASSYPRRSPTSFHPLKVDLSSSIYRRVGSKGIKPKKHTMAHENDSIH 60
           MA+PG P AF T+ S YPR SP S HPLKVDLS  ++RR G+KGIKPK  TMAHEND IH
Sbjct: 1   MAMPGYPRAFATVGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDRIH 60

Query: 61  SISLEDVERSANYERSPKSLSQDSFILSSMNMNFLERLILAWRIVFPPTSTPKLNSNAMI 120
           SIS +DVE SA+YERSP+SLSQ+SFILSSM MNFLERLILAWRI+F P+ST K NSNAMI
Sbjct: 61  SISEQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIF-PSSTSKSNSNAMI 120

Query: 121 AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDFRTIYSV 180
           AKQRLKMILLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQFNVSTD D RTIYSV
Sbjct: 121 AKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSV 180

Query: 181 TVPVRMVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKG 229
           TVPVR VKA+YQGSEEV AT NT+LKDDGE S  AG IFDSLIA+GKG
Sbjct: 181 TVPVRRVKADYQGSEEVGATINTELKDDGERSGPAGPIFDSLIAEGKG 227

[Close]

BLAST of CcUC05G106250 vs. ExPASy Swiss-Prot
Match: Q9C4Z7 (Cell division topological specificity factor homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MINE1 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.3e-36
Identity = 93/193 (48.19%), Postives = 120/193 (62.18%), Query Frame = 0


Query: 29  KVDLSSSIYRRVGSKGIKPKKHTMAHENDSIHSISLEDVERSANYERSPKSLSQ--DSFI 88
           KVD +  I   V S   +     +A   ++           + +YE SP    Q  +SF+
Sbjct: 34  KVDFTGFISNGVNSLETQKCTPGLAISRENTRGQVKVLARNTGDYELSPSPAEQEIESFL 93

Query: 89  LSSMNMNFLERLILAWRIVFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVD 148
            +++NM F +RL LAW+I+F P+   + +SNA IAKQRLKMIL SDRC V+DEAK+KIV+
Sbjct: 94  YNAINMGFFDRLNLAWKIIF-PSHASRRSSNARIAKQRLKMILFSDRCDVSDEAKRKIVN 153

Query: 149 NILSTLSDFVEIDSEDKVQFNVSTDLDFRTIYSVTVPVRMVKAEYQGSEEVEATTNTDLK 208
           NI+  LSDFVEI+SE+KVQ NVSTD D  TIYSVTVPVR VK EYQ  +E    TN + K
Sbjct: 154 NIIHALSDFVEIESEEKVQLNVSTDGDLGTIYSVTVPVRRVKPEYQDVDEAGTITNVEYK 213

Query: 209 DDGEGSASAGLIF 220
           D  +GS      F
Sbjct: 214 DTRDGSVDVRFDF 225

[Close]

BLAST of CcUC05G106250 vs. ExPASy TrEMBL
Match: A0A5A7SVD6 (Cell division topological specificity factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00060 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 189/229 (82.53%), Postives = 201/229 (87.77%), Query Frame = 0


Query: 1   MAIPGDPMAFPTLASSYPRRSPTSFHPLKVDLSSSIYRRVGSKGIKPKKHTMAHENDSIH 60
           MAIP DP AF TL S YPRRSP S HP K D SS ++RR G+KG +PK HTMAHENDS+H
Sbjct: 1   MAIPADPRAFATLGSCYPRRSPASLHPRKADFSSFVHRRYGNKGTRPKWHTMAHENDSLH 60

Query: 61  SISLEDVERSANYERSPKSLSQDSFILSSMNMNFLERLILAWRIVFPPTSTPKLNSNAMI 120
           SISLE+VE SA YE+S KSLSQ+SFILSSMNMNFLERL LAWRI+F P+S PK+ SNA I
Sbjct: 61  SISLENVENSAKYEQSSKSLSQESFILSSMNMNFLERLKLAWRIIF-PSSAPKMKSNATI 120

Query: 121 AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDFRTIYSV 180
           AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLD RTIYSV
Sbjct: 121 AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSV 180

Query: 181 TVPVRMVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKGS 230
           TVPVR VKAEYQGSEEV A TNTDLKDDGE S SAGLIFDSL+ADGKGS
Sbjct: 181 TVPVRRVKAEYQGSEEVGAITNTDLKDDGEESGSAGLIFDSLVADGKGS 228

[Close]

BLAST of CcUC05G106250 vs. ExPASy TrEMBL
Match: A0A1S3BEH9 (cell division topological specificity factor homolog, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489163 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 189/229 (82.53%), Postives = 201/229 (87.77%), Query Frame = 0


Query: 1   MAIPGDPMAFPTLASSYPRRSPTSFHPLKVDLSSSIYRRVGSKGIKPKKHTMAHENDSIH 60
           MAIP DP AF TL S YPRRSP S HP K D SS ++RR G+KG +PK HTMAHENDS+H
Sbjct: 1   MAIPADPRAFATLGSCYPRRSPASLHPRKADFSSFVHRRYGNKGTRPKWHTMAHENDSLH 60

Query: 61  SISLEDVERSANYERSPKSLSQDSFILSSMNMNFLERLILAWRIVFPPTSTPKLNSNAMI 120
           SISLE+VE SA YE+S KSLSQ+SFILSSMNMNFLERL LAWRI+F P+S PK+ SNA I
Sbjct: 61  SISLENVENSAKYEQSSKSLSQESFILSSMNMNFLERLKLAWRIIF-PSSAPKMKSNATI 120

Query: 121 AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDFRTIYSV 180
           AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLD RTIYSV
Sbjct: 121 AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSV 180

Query: 181 TVPVRMVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKGS 230
           TVPVR VKAEYQGSEEV A TNTDLKDDGE S SAGLIFDSL+ADGKGS
Sbjct: 181 TVPVRRVKAEYQGSEEVGAITNTDLKDDGEESGSAGLIFDSLVADGKGS 228

[Close]

BLAST of CcUC05G106250 vs. ExPASy TrEMBL
Match: A0A0A0KQS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606490 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 9.0e-93
Identity = 185/229 (80.79%), Postives = 200/229 (87.34%), Query Frame = 0


Query: 1   MAIPGDPMAFPTLASSYPRRSPTSFHPLKVDLSSSIYRRVGSKGIKPKKHTMAHENDSIH 60
           MAIP DP AF TL+S YPRRSP   HP K DLSS ++RR G+KG +PK HTM+HENDS+H
Sbjct: 1   MAIPADPRAFATLSSCYPRRSPAFLHPRKADLSSFVHRRYGNKGTRPKWHTMSHENDSLH 60

Query: 61  SISLEDVERSANYERSPKSLSQDSFILSSMNMNFLERLILAWRIVFPPTSTPKLNSNAMI 120
           SISLE+VE S NYERS KSLS++SFILSSMNMNFLERL LAWRI+F P+S PK+ SNA I
Sbjct: 61  SISLENVESSENYERSSKSLSEESFILSSMNMNFLERLTLAWRIIF-PSSAPKMESNATI 120

Query: 121 AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDFRTIYSV 180
           AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLD RTIYSV
Sbjct: 121 AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSV 180

Query: 181 TVPVRMVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKGS 230
           TVPVR VKAEYQGSEEV    NT+LKDDGE S SAGLIFDSL+ADGKGS
Sbjct: 181 TVPVRRVKAEYQGSEEVGEIANTNLKDDGEESGSAGLIFDSLVADGKGS 228

[Close]

BLAST of CcUC05G106250 vs. ExPASy TrEMBL
Match: A0A6J1K368 (cell division topological specificity factor homolog, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491965 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.5e-89
Identity = 181/228 (79.39%), Postives = 198/228 (86.84%), Query Frame = 0


Query: 1   MAIPGDPMAFPTLASSYPRRSPTSFHPLKVDLSSSIYRRVGSKGIKPKKHTMAHENDSIH 60
           MA+PG P AF T+ S YPR SP S HPLKVDLS  ++RR G+KGIKPK  TMAHEND IH
Sbjct: 1   MAMPGYPRAFATVGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDRIH 60

Query: 61  SISLEDVERSANYERSPKSLSQDSFILSSMNMNFLERLILAWRIVFPPTSTPKLNSNAMI 120
           SIS +DVE SA+YERSP+SLSQ+SFILSSM MNFLERLILAWRI+F P+ST K NSNAMI
Sbjct: 61  SISEQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIF-PSSTSKSNSNAMI 120

Query: 121 AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDFRTIYSV 180
           AKQRLKMILLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQFNVSTD D RTIYSV
Sbjct: 121 AKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSV 180

Query: 181 TVPVRMVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKG 229
           TVPVR VKA+YQGSEEV AT NT+LKDDGE S  AG IFDSLIA+GKG
Sbjct: 181 TVPVRRVKADYQGSEEVGATINTELKDDGERSGPAGPIFDSLIAEGKG 227

[Close]

BLAST of CcUC05G106250 vs. ExPASy TrEMBL
Match: A0A6J1K9T9 (cell division topological specificity factor homolog, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491965 PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 1.0e-88
Identity = 180/227 (79.30%), Postives = 197/227 (86.78%), Query Frame = 0


Query: 1   MAIPGDPMAFPTLASSYPRRSPTSFHPLKVDLSSSIYRRVGSKGIKPKKHTMAHENDSIH 60
           MA+PG P AF T+ S YPR SP S HPLKVDLS  ++RR G+KGIKPK  TMAHEND IH
Sbjct: 1   MAMPGYPRAFATVGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDRIH 60

Query: 61  SISLEDVERSANYERSPKSLSQDSFILSSMNMNFLERLILAWRIVFPPTSTPKLNSNAMI 120
           SIS +DVE SA+YERSP+SLSQ+SFILSSM MNFLERLILAWRI+F P+ST K NSNAMI
Sbjct: 61  SISEQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIF-PSSTSKSNSNAMI 120

Query: 121 AKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDFRTIYSV 180
           AKQRLKMILLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQFNVSTD D RTIYSV
Sbjct: 121 AKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSV 180

Query: 181 TVPVRMVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGK 228
           TVPVR VKA+YQGSEEV AT NT+LKDDGE S  AG IFDSLIA+GK
Sbjct: 181 TVPVRRVKADYQGSEEVGATINTELKDDGERSGPAGPIFDSLIAEGK 226

[Close]

BLAST of CcUC05G106250 vs. TAIR 10
Match: AT1G69390.1 (homologue of bacterial MinE 1 )

HSP 1 Score: 153.3 bits (386), Expect = 2.4e-37
Identity = 93/193 (48.19%), Postives = 120/193 (62.18%), Query Frame = 0


Query: 29  KVDLSSSIYRRVGSKGIKPKKHTMAHENDSIHSISLEDVERSANYERSPKSLSQ--DSFI 88
           KVD +  I   V S   +     +A   ++           + +YE SP    Q  +SF+
Sbjct: 34  KVDFTGFISNGVNSLETQKCTPGLAISRENTRGQVKVLARNTGDYELSPSPAEQEIESFL 93

Query: 89  LSSMNMNFLERLILAWRIVFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVD 148
            +++NM F +RL LAW+I+F P+   + +SNA IAKQRLKMIL SDRC V+DEAK+KIV+
Sbjct: 94  YNAINMGFFDRLNLAWKIIF-PSHASRRSSNARIAKQRLKMILFSDRCDVSDEAKRKIVN 153

Query: 149 NILSTLSDFVEIDSEDKVQFNVSTDLDFRTIYSVTVPVRMVKAEYQGSEEVEATTNTDLK 208
           NI+  LSDFVEI+SE+KVQ NVSTD D  TIYSVTVPVR VK EYQ  +E    TN + K
Sbjct: 154 NIIHALSDFVEIESEEKVQLNVSTDGDLGTIYSVTVPVRRVKPEYQDVDEAGTITNVEYK 213

Query: 209 DDGEGSASAGLIF 220
           D  +GS      F
Sbjct: 214 DTRDGSVDVRFDF 225

The following BLAST results are available for this feature:

BLAST of CcUC05G106250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446409.1	2.6e-94	82.53	PREDICTED: cell division topological specificity factor homolog, chloroplastic [...	[more]
XP_004135443.3	1.6e-91	80.62	cell division topological specificity factor homolog, chloroplastic [Cucumis sat...	[more]
KAG6601459.1	5.0e-90	79.82	Cell division topological specificity factor-like, chloroplastic, partial [Cucur...	[more]
XP_023551705.1	5.0e-90	80.62	cell division topological specificity factor homolog, chloroplastic-like [Cucurb...	[more]
XP_022996852.1	7.3e-89	79.39	cell division topological specificity factor homolog, chloroplastic-like isoform...	[more]

BLAST of CcUC05G106250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C4Z7	3.3e-36	48.19	Cell division topological specificity factor homolog, chloroplastic OS=Arabidops...	[more]

BLAST of CcUC05G106250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVD6	1.2e-94	82.53	Cell division topological specificity factor-like protein OS=Cucumis melo var. m...	[more]
A0A1S3BEH9	1.2e-94	82.53	cell division topological specificity factor homolog, chloroplastic OS=Cucumis m...	[more]
A0A0A0KQS2	9.0e-93	80.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606490 PE=3 SV=1	[more]
A0A6J1K368	3.5e-89	79.39	cell division topological specificity factor homolog, chloroplastic-like isoform...	[more]
A0A6J1K9T9	1.0e-88	79.30	cell division topological specificity factor homolog, chloroplastic-like isoform...	[more]

BLAST of CcUC05G106250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69390.1	2.4e-37	48.19	homologue of bacterial MinE 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036707	Cell division topological specificity factor MinE superfamily	GENE3D	3.30.1070.10	Cell division topological specificity factor MinE	coord: 106..184 e-value: 9.1E-8 score: 33.7
IPR005527	Cell division topological specificity factor MinE	PFAM	PF03776	MinE	coord: 119..185 e-value: 7.7E-14 score: 51.5
IPR005527	Cell division topological specificity factor MinE	PANTHER	PTHR33404	CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR HOMOLOG, CHLOROPLASTIC	coord: 1..214
None	No IPR available	PANTHER	PTHR33404:SF2	CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR HOMOLOG, CHLOROPLASTIC	coord: 1..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G106250.1	CcUC05G106250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010020	chloroplast fission
biological_process	GO:0032955	regulation of division septum assembly
biological_process	GO:0051301	cell division