CcUC05G105430 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G105430
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Piriformospora indica-insensitive protein 2-like
Location	CicolChr05: 32907308 .. 32907589 (+)
RNA-Seq Expression	CcUC05G105430
Synteny	CcUC05G105430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTCTTCTTCTTCTTTCTTCCAATGCAAACTCAATCCCATCGCCATTTTCATCTTTCTTCTTCTTCTTTCTGGGTTTTCCTCTGCAACTCGGCCGGGTAAAATGATGGAACATCATGGGATGAATAATTCCGACATGTCGAATTCTTATTTCAATTACAAGACTGGCTTCCGATATGTCGGCCAGACCTTCAGCTTTCTTCCCAGAGGCGTTCCGATTCCTCCTTCCGGCCCTTCCGACCGTCACAACTCTGTCGTTGACTCTGTTCCTCCCAATTAA

mRNA sequence

ATGCCTTCTTCTTCTTCTTTCTTCCAATGCAAACTCAATCCCATCGCCATTTTCATCTTTCTTCTTCTTCTTTCTGGGTTTTCCTCTGCAACTCGGCCGGGTAAAATGATGGAACATCATGGGATGAATAATTCCGACATGTCGAATTCTTATTTCAATTACAAGACTGGCTTCCGATATGTCGGCCAGACCTTCAGCTTTCTTCCCAGAGGCGTTCCGATTCCTCCTTCCGGCCCTTCCGACCGTCACAACTCTGTCGTTGACTCTGTTCCTCCCAATTAA

Coding sequence (CDS)

ATGCCTTCTTCTTCTTCTTTCTTCCAATGCAAACTCAATCCCATCGCCATTTTCATCTTTCTTCTTCTTCTTTCTGGGTTTTCCTCTGCAACTCGGCCGGGTAAAATGATGGAACATCATGGGATGAATAATTCCGACATGTCGAATTCTTATTTCAATTACAAGACTGGCTTCCGATATGTCGGCCAGACCTTCAGCTTTCTTCCCAGAGGCGTTCCGATTCCTCCTTCCGGCCCTTCCGACCGTCACAACTCTGTCGTTGACTCTGTTCCTCCCAATTAA

Protein sequence

MPSSSSFFQCKLNPIAIFIFLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPPN

Homology

[Close]

BLAST of CcUC05G105430 vs. NCBI nr
Match: KGN52035.1 (hypothetical protein Csa_008746 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 4.8e-23
Identity = 66/93 (70.97%), Postives = 71/93 (76.34%), Query Frame = 0


Query: 1  MPSSSSFFQCKLNPIAIFIFLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYKTGFRY 60
          MPSSSS  Q  +    + + LLLLSG SSATRPGK ME   M N DMSNS   YKT FRY
Sbjct: 1  MPSSSS--QTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEM-NPDMSNS---YKTAFRY 60

Query: 61 VGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPPN 94
           GQTFSFLP+GVPIPPSGPSDRHNSVVDS+PPN
Sbjct: 61 GGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN 87

[Close]

BLAST of CcUC05G105430 vs. NCBI nr
Match: KAA0034518.1 (putative Membrane lipoprotein [Cucumis melo var. makuwa])

HSP 1 Score: 117.1 bits (292), Expect = 8.2e-23
Identity = 69/93 (74.19%), Postives = 71/93 (76.34%), Query Frame = 0


Query: 3  SSSSFFQCKLNPIAIFI-FLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYK-TGFRY 62
          SSSS FQ K N I IFI  LLLLSGFSSATRPG  ME       DMSNS  NYK T FRY
Sbjct: 13 SSSSSFQFKQNSIPIFILLLLLLSGFSSATRPGGTMEF-----PDMSNS--NYKTTAFRY 72

Query: 63 VGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPPN 94
           GQTF FLP+GVPIPPSGPSDRHNSVVDS+PPN
Sbjct: 73 AGQTFGFLPKGVPIPPSGPSDRHNSVVDSLPPN 98

[Close]

BLAST of CcUC05G105430 vs. NCBI nr
Match: TYK09072.1 (putative Membrane lipoprotein [Cucumis melo var. makuwa])

HSP 1 Score: 117.1 bits (292), Expect = 8.2e-23
Identity = 69/93 (74.19%), Postives = 71/93 (76.34%), Query Frame = 0


Query: 3   SSSSFFQCKLNPIAIFI-FLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYK-TGFRY 62
           SSSS FQ K N I IFI  LLLLSGFSSATRPG  ME       DMSNS  NYK T FRY
Sbjct: 17  SSSSSFQFKQNSIPIFILLLLLLSGFSSATRPGGTMEF-----PDMSNS--NYKTTAFRY 76

Query: 63  VGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPPN 94
            GQTF FLP+GVPIPPSGPSDRHNSVVDS+PPN
Sbjct: 77  AGQTFGFLPKGVPIPPSGPSDRHNSVVDSLPPN 102

[Close]

BLAST of CcUC05G105430 vs. NCBI nr
Match: KAG6601330.1 (Protein IDA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 114.4 bits (285), Expect = 5.3e-22
Identity = 64/92 (69.57%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 3  SSSSFFQCKLNPIAIFIFLLLL-SGFSSATRPGKMMEHHGMNNSDMSNSYFNYKTGFRYV 62
          SSSS      +  AIF+ LLLL SGF SATRPGK M H      D+SN  FNYKTGFRYV
Sbjct: 6  SSSSSSSSSSSLSAIFVLLLLLVSGFCSATRPGKTMGHE--LKPDLSN--FNYKTGFRYV 65

Query: 63 GQTFSFLPRGVPIPPSGPSDRHNSVVDSVPPN 94
          GQTFS+LPRGVPIPPSGPSDRHNS+VDS+PP+
Sbjct: 66 GQTFSYLPRGVPIPPSGPSDRHNSLVDSLPPS 93

[Close]

BLAST of CcUC05G105430 vs. NCBI nr
Match: KAG7032113.1 (Protein IDA, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 112.1 bits (279), Expect = 2.6e-21
Identity = 65/94 (69.15%), Postives = 72/94 (76.60%), Query Frame = 0


Query: 1  MPSSSSFFQCKLNPIAIFIFLLLL-SGFSSATRPGKMMEHHGMNNSDMSNSYFNYKTGFR 60
          M SSSS     L+  AIF+ LLLL SGF SATRPGK M H      D+ N  FNYKTGFR
Sbjct: 1  MLSSSSSSSSSLS--AIFVLLLLLVSGFCSATRPGKTMGHE--LKPDLLN--FNYKTGFR 60

Query: 61 YVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPPN 94
          YVGQTFS+LPRGVPIPPSGPSDRHNS+VDS+PP+
Sbjct: 61 YVGQTFSYLPRGVPIPPSGPSDRHNSLVDSLPPS 88

[Close]

BLAST of CcUC05G105430 vs. ExPASy Swiss-Prot
Match: Q8LAD7 (Protein IDA OS=Arabidopsis thaliana OX=3702 GN=IDA PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 4.0e-04
Identity = 29/78 (37.18%), Postives = 38/78 (48.72%), Query Frame = 0


Query: 15 IAIFIFLLLLSGFSSATRPGKMME-HHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVP 74
          +   +FL   S   +A R G  ME    +      NS+             F +LP+GVP
Sbjct: 11 LCFVLFLAASSSCVAAARIGATMEMKKNIKRLTFKNSHI------------FGYLPKGVP 70

Query: 75 IPPSGPSDRHNSVVDSVP 92
          IPPS PS RHNS V+S+P
Sbjct: 71 IPPSAPSKRHNSFVNSLP 76

[Close]

BLAST of CcUC05G105430 vs. ExPASy TrEMBL
Match: A0A0A0KR07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608230 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.3e-23
Identity = 66/93 (70.97%), Postives = 71/93 (76.34%), Query Frame = 0


Query: 1  MPSSSSFFQCKLNPIAIFIFLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYKTGFRY 60
          MPSSSS  Q  +    + + LLLLSG SSATRPGK ME   M N DMSNS   YKT FRY
Sbjct: 1  MPSSSS--QTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEM-NPDMSNS---YKTAFRY 60

Query: 61 VGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPPN 94
           GQTFSFLP+GVPIPPSGPSDRHNSVVDS+PPN
Sbjct: 61 GGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN 87

[Close]

BLAST of CcUC05G105430 vs. ExPASy TrEMBL
Match: A0A5D3CCP4 (Putative Membrane lipoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00620 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.0e-23
Identity = 69/93 (74.19%), Postives = 71/93 (76.34%), Query Frame = 0


Query: 3   SSSSFFQCKLNPIAIFI-FLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYK-TGFRY 62
           SSSS FQ K N I IFI  LLLLSGFSSATRPG  ME       DMSNS  NYK T FRY
Sbjct: 17  SSSSSFQFKQNSIPIFILLLLLLSGFSSATRPGGTMEF-----PDMSNS--NYKTTAFRY 76

Query: 63  VGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPPN 94
            GQTF FLP+GVPIPPSGPSDRHNSVVDS+PPN
Sbjct: 77  AGQTFGFLPKGVPIPPSGPSDRHNSVVDSLPPN 102

[Close]

BLAST of CcUC05G105430 vs. ExPASy TrEMBL
Match: A0A5A7SV51 (Putative Membrane lipoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G005330 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.0e-23
Identity = 69/93 (74.19%), Postives = 71/93 (76.34%), Query Frame = 0


Query: 3  SSSSFFQCKLNPIAIFI-FLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYK-TGFRY 62
          SSSS FQ K N I IFI  LLLLSGFSSATRPG  ME       DMSNS  NYK T FRY
Sbjct: 13 SSSSSFQFKQNSIPIFILLLLLLSGFSSATRPGGTMEF-----PDMSNS--NYKTTAFRY 72

Query: 63 VGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPPN 94
           GQTF FLP+GVPIPPSGPSDRHNSVVDS+PPN
Sbjct: 73 AGQTFGFLPKGVPIPPSGPSDRHNSVVDSLPPN 98

[Close]

BLAST of CcUC05G105430 vs. ExPASy TrEMBL
Match: A0A5D2EBI1 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A12G197000v1 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 9.2e-12
Identity = 47/95 (49.47%), Postives = 62/95 (65.26%), Query Frame = 0


Query: 1  MPSSSSFFQC---KLNPIAIFIFLL-LLSGFSSATRPGKMMEHHGMNNSDMSNSYF--NY 60
          +P  S    C   +L+ I   +FL+ LL+G S ATRPGK +    + +  +S + F   Y
Sbjct: 9  LPLQSKKISCTRQQLSNIIYVVFLITLLAGSSFATRPGKTI----IVDDTVSMTVFPRKY 68

Query: 61 KTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDS 90
          +TGFRY GQ F+F P+G+PIPPSGPS RHNSVVDS
Sbjct: 69 ETGFRYQGQMFNFFPKGIPIPPSGPSKRHNSVVDS 99

[Close]

BLAST of CcUC05G105430 vs. ExPASy TrEMBL
Match: A0A2P5SAI3 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A12G180800v1 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 9.2e-12
Identity = 47/95 (49.47%), Postives = 62/95 (65.26%), Query Frame = 0


Query: 1  MPSSSSFFQC---KLNPIAIFIFLL-LLSGFSSATRPGKMMEHHGMNNSDMSNSYF--NY 60
          +P  S    C   +L+ I   +FL+ LL+G S ATRPGK +    + +  +S + F   Y
Sbjct: 9  LPLQSKKISCTRQQLSNIIYVVFLITLLAGSSFATRPGKTI----IVDDTVSMTVFPRKY 68

Query: 61 KTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDS 90
          +TGFRY GQ F+F P+G+PIPPSGPS RHNSVVDS
Sbjct: 69 ETGFRYQGQMFNFFPKGIPIPPSGPSKRHNSVVDS 99

[Close]

BLAST of CcUC05G105430 vs. TAIR 10
Match: AT1G68765.1 (Putative membrane lipoprotein )

HSP 1 Score: 45.4 bits (106), Expect = 2.8e-05
Identity = 29/78 (37.18%), Postives = 38/78 (48.72%), Query Frame = 0


Query: 15 IAIFIFLLLLSGFSSATRPGKMME-HHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVP 74
          +   +FL   S   +A R G  ME    +      NS+             F +LP+GVP
Sbjct: 11 LCFVLFLAASSSCVAAARIGATMEMKKNIKRLTFKNSHI------------FGYLPKGVP 70

Query: 75 IPPSGPSDRHNSVVDSVP 92
          IPPS PS RHNS V+S+P
Sbjct: 71 IPPSAPSKRHNSFVNSLP 76

The following BLAST results are available for this feature:

BLAST of CcUC05G105430 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN52035.1	4.8e-23	70.97	hypothetical protein Csa_008746 [Cucumis sativus]	[more]
KAA0034518.1	8.2e-23	74.19	putative Membrane lipoprotein [Cucumis melo var. makuwa]	[more]
TYK09072.1	8.2e-23	74.19	putative Membrane lipoprotein [Cucumis melo var. makuwa]	[more]
KAG6601330.1	5.3e-22	69.57	Protein IDA, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7032113.1	2.6e-21	69.15	Protein IDA, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CcUC05G105430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAD7	4.0e-04	37.18	Protein IDA OS=Arabidopsis thaliana OX=3702 GN=IDA PE=1 SV=1	[more]

BLAST of CcUC05G105430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR07	2.3e-23	70.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608230 PE=4 SV=1	[more]
A0A5D3CCP4	4.0e-23	74.19	Putative Membrane lipoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7SV51	4.0e-23	74.19	Putative Membrane lipoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D2EBI1	9.2e-12	49.47	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A12G197000v1 PE=...	[more]
A0A2P5SAI3	9.2e-12	49.47	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A12G180800v1 PE...	[more]

BLAST of CcUC05G105430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68765.1	2.8e-05	37.18	Putative membrane lipoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..93
None	No IPR available	PANTHER	PTHR33599:SF18	PROTEIN IDA	coord: 6..93
IPR039639	Protein IDA-like	PANTHER	PTHR33599	PROTEIN IDA-LIKE 5	coord: 6..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G105430.1	CcUC05G105430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010227	floral organ abscission
cellular_component	GO:0110165	cellular anatomical entity