CcUC05G104970 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G104970
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr05: 32527456 .. 32530213 (-)
RNA-Seq Expression	CcUC05G104970
Synteny	CcUC05G104970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCCTTTGTCTTGGAAACTCTTGATGGAATCATCAAACATTTGCTCGATCGTCTTGAAACCAGGGAATCCCAATTCAGAAATCTTGCTCGTGTCCATGTTGTGAGGGTTGCAATCTCCTTCCTGGAAGCTGCACCTGTTTGTGTTTGATTCTTTTAACAAGATTGTTTATGCAGATGAACGGTTTCATGAAATGACTAGGAGAAAACAAAGAGGGTCTTGTTGAGATTCTTCAACTTACTTCTTTCCAAATGGGTAGGATGGATATTTGGCTCTGAGCATACCAATGATCCGTGACCAGTGCGCCACTGTGCTTGAACATATGATCCTGCCTGATGCTTCTGGATTTTCCATTGCCAAGATGTGCGCTGCTACCACATCATCTATGTGGACAAACCCCAACGTGGAGTTTGGATATTCTCCCCTTTCACCTGATGGAACAACCCATCTGTTTGATGTTTGTTTTTTTTTTCCATCGAAGAGAAAACTGAGAAAGAAATTTAGGGACTGTTTGAAGAAGATGGAGGGATTATTGTAAACCTTTAATAATGCTGAGTAGGAGATGCTGTGTGCTGGTTGGCTTTGGTGTAAGCAAGGGGCCAACAACAAAAGATGGGTTCACCACAACTAGATCCATCCCATGTTCTTTTGCCATGCGCCAAGCCTCTTTCTCTGCCAAAGTCTTTGCAAATGCATACCAAAGCTGCCAAAATACCCAAATGGAGAAAGTATAAAAAAAACAAAAACAACAAAAGGCCTCTAGATTTTGGTCGATTGAATTGTATCGATCTGCCTCTGCATTGGAAACTGACATGGAATAGAACAGAGAAAGAGAGGTTGGTTCTTACGTTGTAGCTCTTGCAATAGTCAGGATCTGTCCAGTGCGATTCATTGAGAGGACAAAGTTGTTGGACATCATAACGATATCTAATTGCAGAGCAGGAAGAGGTGAGCACTACTCGTTTCACACTGTTTGCTTTTAAACAGGAATTTAGTACATTCATTGTACCATTTATACTTGGATCAATCAGAGTTGCCTGTGTCATATTGCCAAACGTTAATCACACACTCATAAGGAAATGGCTTTTTGAATATGGATTAAATGGTTTCAGAAATATGATAATCCCAAATTGAGGAGAAAGGAGTTTGGGCATACTCCAGTTGTAGACAATAAAAATATTTATGTAGCACTTGGTTCTTCAGTTTGAGAAGAGTGAATTTTGTATAGCACCGAGTTCAAGGTTTTAGATTGTATAGACTGTTTGGATTATGTAGAACAACGAATTTCAAGAACTTAGTTTATATAACTTACGTTAAATTCATCATATTGTGTAACGCTGGGGCTAGCTTTCGCCAAACAAAATATTTTACTTTGGACCACCAAATTCTTGCATATGAATTCAAAATCTTTTAACTGTCATGAGTTGACCTAGGTAAATATGGGGCATGACCTTGATAAAGAGCTAAGAAGTCGTGAGTTCGATCCATGGTGGTCACCTACCTTAAATTTAATATTTTACGGTTCCTTTGACACCCAAATGTTGTAGGATTAGGCGGGTTGTCCTATAGTCGAGTGTTCACAAACTGGCACAATACTCACGAATATTAAAAAGAAAAAAAATTCAAAGGCTTCACCCAAAAAGACCACCCAAATTAATCAAAGAATCGGGACCTTGCCTTGATGTTGTTATCGTAGGGAACAATAACAGGTGAAGCAGTGTGGAAGACCCCGTCCACTCCTTGAATGGCCTCATCGAAGCTACCTTCTTCTAACAAATCAGCTTTTACTATCTTCAGTCTCTCCTTGGCTCCATTAAACTCCCACAGAAACCCAACGTGTCCATAGTTTCCTATTCAGGCAAATAACAAGTAATTGTTAAGAATATGTATGAAAGGATAGGTATACCATAATCTAAACTTAAACTGTTGGGCTTATATGAGTATAGGAGGACAGTTTATTGGTTTGAGTTCAAAATTCAAATCAAAGGAAGTTCTTTCTTTTACCTACTTTCTGTCATTAATTTTTTTCCTTTATGCATTGTATCATGTCAATAATAAAAGACCTTTCTTCTCTTCTAGTCATTAATTTCTTCTCTAACGTATTAATGACCCGAAATCTAGCAATAACCTCTATGTGCAAAATTATGGAAAGCAATAGACGACCACCATTAAGATCAAACAATTCCATTGAATGAATTACGATTGCTTCTGTGACAACATCTGCAACATGATGCTTGAGATGACGATGAAATTGTGTGATAGTTAAACTGTAATTTTGATGGCTGCGGACCGAACCAGGGTGAATTTGGTGGCAATAAGTGTATGGAGGAAGATGAAGGGAGGGGAAATACAAAGCAAAGGACATGATTACACTTCAGAACCTGGGTTTCTAACGGTGGTGCGAACGTGATGGCCATTCTCGAGCAGTGTCTTCACCAAGTAAGAGGCTATGAAGCCAGTGCCGCCGGTTACACAGTACTCTGGCATCTCGGCTGGCTGTGCGTGGGTGGTGGTCGTGTGCAATGCAATGGAAGAGTTTATACAGTGGCCGTAGTTGAGGATTGTTCACGTGTGGAGCACCTGCAGTTATTATATTGTTGAGCTCATTTACAAGAGTGGAAGATGACTCATTCATTTTGTAAGGTTGGAGTTTTCTAACATAAACATAAATGGTGCTTTCTTTGATTTACAACTTTTTTTTTTTTTTAAAGTTATGGGTGACCTATACACCGATGCTTTTTATACGTTATTGCATTAG

mRNA sequence

AAATCCTTTGTCTTGGAAACTCTTGATGGAATCATCAAACATTTGCTCGATCGTCTTGAAACCAGGGAATCCCAATTCAGAAATCTTGCTCGTGTCCATGTTGTGAGGGTTGCAATCTCCTTCCTGGAAGCTGCACCTGATGGATATTTGGCTCTGAGCATACCAATGATCCGTGACCAGTGCGCCACTGTGCTTGAACATATGATCCTGCCTGATGCTTCTGGATTTTCCATTGCCAAGATGTGCGCTGCTACCACATCATCTATGTGGACAAACCCCAACGTGGAGTTTGGATATTCTCCCCTTTCACCTGATGGAACAACCCATCTGTTTGATAGAAAACTGAGAAAGAAATTTAGGGACTGTTTGAAGAAGATGGAGGGATTATTAACCTGGGTTTCTAACGGTGGTGCGAACGTGATGGCCATTCTCGAGCAGTGTCTTCACCAAGTAAGAGGCTATGAAGCCAGTGCCGCCGGTTACACAGTACTCTGGCATCTCGGCTGGCTGTGCGTGGGTGGTGGTCGTGTGCAATGCAATGGAAGAGTTTATACAGTGGCCGTAGTTGAGGATTGTTCACTTATGGGTGACCTATACACCGATGCTTTTTATACGTTATTGCATTAG

Coding sequence (CDS)

AAATCCTTTGTCTTGGAAACTCTTGATGGAATCATCAAACATTTGCTCGATCGTCTTGAAACCAGGGAATCCCAATTCAGAAATCTTGCTCGTGTCCATGTTGTGAGGGTTGCAATCTCCTTCCTGGAAGCTGCACCTGATGGATATTTGGCTCTGAGCATACCAATGATCCGTGACCAGTGCGCCACTGTGCTTGAACATATGATCCTGCCTGATGCTTCTGGATTTTCCATTGCCAAGATGTGCGCTGCTACCACATCATCTATGTGGACAAACCCCAACGTGGAGTTTGGATATTCTCCCCTTTCACCTGATGGAACAACCCATCTGTTTGATAGAAAACTGAGAAAGAAATTTAGGGACTGTTTGAAGAAGATGGAGGGATTATTAACCTGGGTTTCTAACGGTGGTGCGAACGTGATGGCCATTCTCGAGCAGTGTCTTCACCAAGTAAGAGGCTATGAAGCCAGTGCCGCCGGTTACACAGTACTCTGGCATCTCGGCTGGCTGTGCGTGGGTGGTGGTCGTGTGCAATGCAATGGAAGAGTTTATACAGTGGCCGTAGTTGAGGATTGTTCACTTATGGGTGACCTATACACCGATGCTTTTTATACGTTATTGCATTAG

Protein sequence

KSFVLETLDGIIKHLLDRLETRESQFRNLARVHVVRVAISFLEAAPDGYLALSIPMIRDQCATVLEHMILPDASGFSIAKMCAATTSSMWTNPNVEFGYSPLSPDGTTHLFDRKLRKKFRDCLKKMEGLLTWVSNGGANVMAILEQCLHQVRGYEASAAGYTVLWHLGWLCVGGGRVQCNGRVYTVAVVEDCSLMGDLYTDAFYTLLH

Homology

The following BLAST results are available for this feature:

BLAST of CcUC05G104970 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC05G104970 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC05G104970 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC05G104970 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 204..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G104970.1	CcUC05G104970.1	mRNA