CcUC05G104890 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G104890
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Ribulose bisphosphate carboxylase small subunit
Location	CicolChr05: 32469244 .. 32470529 (-)
RNA-Seq Expression	CcUC05G104890
Synteny	CcUC05G104890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCAACTAAAATTACGACCACTAAATGGGTTTGTGTATGGATAAAATAGGCAGTGTAAAGGCCTTATAAATACACCACCATTTCACAGTACAAGGCCTCTCAGACCGAACAGCAAGAGCTTTCAAGCACTCTACTAGCTAGCTTCTAGTAAATCCCTCTAAACTCCCGAGGAAAAGAGGCATCAATGGCTTCCTCCATCGTCTCATCCGCGGCTGTTGCCTCTGTGAACAGGGCCTCCCCTGCTCAAGCTAGCATGGTAGCACCCTTCACTGGCCTGAAATCCGGAGCCGCCTTCCCCATCACTCGCAAGAACAACGACATCACCACTCTGGCCAGCAATGGTGGAAGAGTTCAGTGCATGAAGGTACATAATTTCTAATTACTTTTTGTAATTCAATAATTTCTTAATTATTTTAGTATGATGATGATGAATGAATTTAACAAAAGGGGTTTTGTGGAATTGGGTATTTGTAAAAAGGTGTGGCCACCACTTGGATTGAAGAAGTTCGAGACTCTGTCTTACCTGCCTGATCTTGATCAAGCCCAATTGGCGAAAGAAGTAGAGTACCTTCTCAGGAAGGGATGGGTTCCCTGCCTTGAATTCGACGTGCATGTAATGTTTTTTTTCGGTATTTTTATTTTATGGGGGATGGAAATGAAAGGGAAAAAAGTAACAAGTATGAAAAATTGTATACTGTTGTTAATTTTTGCAGGACGGATTCGTGTACCGTGAGAACCACAGGTCACCAGGATACTACGATGGACGCTACTGGACCATGTGGAAGTTGCCCATGTTTGGTTGCACCGATGCGGCTCAGGTGATTCAGGAGATTGAGGAGGCCAAGAAGCACTACCCCGACGCATTCATCAGGGTTATTGGCTTTGACAACGTCCGTCAAGTCCAGTGCATCAGTTTCATTGTCTACAAGCCACCTAAGTTCTACTCTAGCTGATTCCATTCCCAGCTTTCTTGAGGCGAATTTCCAGCATTTGCCTTTTTCCACCTGCTTCCACATCACTTGGCTTTCAATCCAATTTCCCTTTTTTTTTTTTTTTTTTTTTCCTTTTACGTTTTGATCTGTGTACTTCAATCCCTATGTTTATTTCCTCGACTTTCCAATTCGAATTGGAATAAATGATGCTTTGATTTGTTGTTAAATTCCCTATGAATCCTGGATGCATCTTTCTTCTGGAATTCAATCCAATTCGCTGTGCAATTTTCGATTCGGGCTTGTGTGTGTGTATGGTGCACATTAGATTCACGATAACGATAAGATTGAATTAA

mRNA sequence

TACCAACTAAAATTACGACCACTAAATGGGTTTGTGTATGGATAAAATAGGCAGTGTAAAGGCCTTATAAATACACCACCATTTCACAGTACAAGGCCTCTCAGACCGAACAGCAAGAGCTTTCAAGCACTCTACTAGCTAGCTTCTAGTAAATCCCTCTAAACTCCCGAGGAAAAGAGGCATCAATGGCTTCCTCCATCGTCTCATCCGCGGCTGTTGCCTCTGTGAACAGGGCCTCCCCTGCTCAAGCTAGCATGGTAGCACCCTTCACTGGCCTGAAATCCGGAGCCGCCTTCCCCATCACTCGCAAGAACAACGACATCACCACTCTGGCCAGCAATGGTGGAAGAGTTCAGTGCATGAAGGTGTGGCCACCACTTGGATTGAAGAAGTTCGAGACTCTGTCTTACCTGCCTGATCTTGATCAAGCCCAATTGGCGAAAGAAGTAGAGTACCTTCTCAGGAAGGGATGGGTTCCCTGCCTTGAATTCGACGTGCATGACGGATTCGTGTACCGTGAGAACCACAGGTCACCAGGATACTACGATGGACGCTACTGGACCATGTGGAAGTTGCCCATGTTTGGTTGCACCGATGCGGCTCAGGTGATTCAGGAGATTGAGGAGGCCAAGAAGCACTACCCCGACGCATTCATCAGGGTTATTGGCTTTGACAACGTCCGTCAAGTCCAGTGCATCAGTTTCATTGTCTACAAGCCACCTAAGTTCTACTCTAGCTGATTCCATTCCCAGCTTTCTTGAGGCGAATTTCCAGCATTTGCCTTTTTCCACCTGCTTCCACATCACTTGGCTTTCAATCCAATTTCCCTTTTTTTTTTTTTTTTTTTTTCCTTTTACGTTTTGATCTGTGTACTTCAATCCCTATGTTTATTTCCTCGACTTTCCAATTCGAATTGGAATAAATGATGCTTTGATTTGTTGTTAAATTCCCTATGAATCCTGGATGCATCTTTCTTCTGGAATTCAATCCAATTCGCTGTGCAATTTTCGATTCGGGCTTGTGTGTGTGTATGGTGCACATTAGATTCACGATAACGATAAGATTGAATTAA

Coding sequence (CDS)

ATGGCTTCCTCCATCGTCTCATCCGCGGCTGTTGCCTCTGTGAACAGGGCCTCCCCTGCTCAAGCTAGCATGGTAGCACCCTTCACTGGCCTGAAATCCGGAGCCGCCTTCCCCATCACTCGCAAGAACAACGACATCACCACTCTGGCCAGCAATGGTGGAAGAGTTCAGTGCATGAAGGTGTGGCCACCACTTGGATTGAAGAAGTTCGAGACTCTGTCTTACCTGCCTGATCTTGATCAAGCCCAATTGGCGAAAGAAGTAGAGTACCTTCTCAGGAAGGGATGGGTTCCCTGCCTTGAATTCGACGTGCATGACGGATTCGTGTACCGTGAGAACCACAGGTCACCAGGATACTACGATGGACGCTACTGGACCATGTGGAAGTTGCCCATGTTTGGTTGCACCGATGCGGCTCAGGTGATTCAGGAGATTGAGGAGGCCAAGAAGCACTACCCCGACGCATTCATCAGGGTTATTGGCTTTGACAACGTCCGTCAAGTCCAGTGCATCAGTTTCATTGTCTACAAGCCACCTAAGTTCTACTCTAGCTGA

Protein sequence

MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS

Homology

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BLAST of CcUC05G104890 vs. NCBI nr
Match: WP_082711130.1 (MULTISPECIES: ribulose-1,5-bisphosphate carboxylase small subunit [Bacteria])

HSP 1 Score: 379.8 bits (974), Expect = 1.3e-101
Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMK 60
           MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMK
Sbjct: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMK 60

Query: 61  VWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGYY 120
           VWPPLGLKKFETLSYLPDLDQ QLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGYY
Sbjct: 61  VWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGYY 120

Query: 121 DGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPK 180
           DGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPK
Sbjct: 121 DGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPK 180

Query: 181 FYSS 185
           FYSS
Sbjct: 181 FYSS 184

[Close]

BLAST of CcUC05G104890 vs. NCBI nr
Match: XP_038892640.1 (ribulose bisphosphate carboxylase small chain, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 370.9 bits (951), Expect = 6.2e-99
Identity = 178/184 (96.74%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMK 60
           MASSIVSSAAVASVNRASPAQASMVAPFTGLKS AAFPITRKNNDITTLASNGGRVQCMK
Sbjct: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPITRKNNDITTLASNGGRVQCMK 60

Query: 61  VWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGYY 120
           VWPPLGLKKFETLSYLPDLD+AQLAKEVEYLLRKGWVPCLEFD+HDGFVYRENHRSPGYY
Sbjct: 61  VWPPLGLKKFETLSYLPDLDEAQLAKEVEYLLRKGWVPCLEFDIHDGFVYRENHRSPGYY 120

Query: 121 DGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPK 180
           DGRYWTMWKLPMFGCTDAAQVI+EI EAKK YPDAFIRVIGFDNVRQVQCISFIVYKPPK
Sbjct: 121 DGRYWTMWKLPMFGCTDAAQVIKEINEAKKEYPDAFIRVIGFDNVRQVQCISFIVYKPPK 180

Query: 181 FYSS 185
           FYSS
Sbjct: 181 FYSS 184

[Close]

BLAST of CcUC05G104890 vs. NCBI nr
Match: WP_064723948.1 (ribulose-1,5-bisphosphate carboxylase small subunit, partial [Paenarthrobacter nicotinovorans])

HSP 1 Score: 366.7 bits (940), Expect = 1.2e-97
Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMK 60
           MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMK
Sbjct: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMK 60

Query: 61  VWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGYY 120
           VWPPLGLKKFETLSYLPDLDQ QLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGYY
Sbjct: 61  VWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGYY 120

Query: 121 DGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKP 179
           DGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKP
Sbjct: 121 DGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKP 178

[Close]

BLAST of CcUC05G104890 vs. NCBI nr
Match: WP_082918361.1 (ribulose-1,5-bisphosphate carboxylase small subunit [Pseudoalteromonas sp. MQS005] >XP_008446602.1 PREDICTED: ribulose bisphosphate carboxylase small chain, chloroplastic [Cucumis melo] >KAA0034557.1 ribulose bisphosphate carboxylase small chain [Cucumis melo var. makuwa] >TYK09110.1 ribulose bisphosphate carboxylase small chain [Cucumis melo var. makuwa])

HSP 1 Score: 349.0 bits (894), Expect = 2.5e-92
Identity = 161/184 (87.50%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMK 60
           MASSI+SSAAVASVN ASPAQASMVAPFTGLKS AAFP+TRKNNDITTLASNGGRVQCMK
Sbjct: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMK 60

Query: 61  VWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGYY 120
           VWPPLGLKKFETLSYLPD+   QL KEV+YLLRKGW+PC+EFD+H GFVYRENHRSPGYY
Sbjct: 61  VWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYY 120

Query: 121 DGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPK 180
           DGRYWTMWKLPMFGCTD++QV+ EIEEAKK YPDA+IRVIGFDNVRQVQCISFI YKPP+
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPR 180

Query: 181 FYSS 185
           FY+S
Sbjct: 181 FYTS 184

[Close]

BLAST of CcUC05G104890 vs. NCBI nr
Match: HAP2066367.1 (hypothetical protein [Escherichia coli])

HSP 1 Score: 345.9 bits (886), Expect = 2.1e-91
Identity = 159/182 (87.36%), Postives = 172/182 (94.51%), Query Frame = 0


Query: 3   SSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVW 62
           SSI+SSAAVASVN ASPAQASMVAPFTGLKS AAFP+TRKNNDITTLASNGGRVQCMKVW
Sbjct: 1   SSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMKVW 60

Query: 63  PPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGYYDG 122
           PPLGLKKFETLSYLPD+   QL KEV+YLLRKGW+PC+EFD+H GFVYRENHRSPGYYDG
Sbjct: 61  PPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYYDG 120

Query: 123 RYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFY 182
           RYWTMWKLPMFGCTD++QV+ EIEEAKK YPDA+IRVIGFDNVRQVQCISFI YKPP+FY
Sbjct: 121 RYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPRFY 180

Query: 183 SS 185
           +S
Sbjct: 181 TS 182

[Close]

BLAST of CcUC05G104890 vs. ExPASy Swiss-Prot
Match: P08474 (Ribulose bisphosphate carboxylase small subunit, chloroplastic OS=Cucumis sativus OX=3659 GN=RBCS PE=2 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 3.3e-87
Identity = 154/179 (86.03%), Postives = 165/179 (92.18%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNN-DITTLASNGGRVQCM 60
           MASSI+SSAAVASVN ASPAQASMVAPFTGLKS A FPITRKNN DITTLASN G+VQCM
Sbjct: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCM 60

Query: 61  KVWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGY 120
           KVWPPLGL+KFETLSYLPD+   QL+KE +YLLR GWVPC+EFD+  GFVYRENHRSPG+
Sbjct: 61  KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGF 120

Query: 121 YDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKP 179
           YDGRYWTMWKLPMFGCTD++QVIQEIEEAKK YPDAFIRVIGFDNVRQVQCISFI YKP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKP 179

[Close]

BLAST of CcUC05G104890 vs. ExPASy Swiss-Prot
Match: P24007 (Ribulose bisphosphate carboxylase small subunit, chloroplastic OS=Pyrus pyrifolia OX=3767 GN=RBCS PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 2.1e-81
Identity = 141/183 (77.05%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 1   MASSIVSSAAVASV--NRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQC 60
           MASS++SS  VA+V  +R +PAQA MVAPF GLKS +AFP+TRK+NDIT++ASNGGRVQC
Sbjct: 1   MASSMISSGTVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSNDITSIASNGGRVQC 60

Query: 61  MKVWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPG 120
           M+VWPPLGLKKFETLSYLP L    LAKEV+YLLRK WVPCLEF++  GFVYRENHRSPG
Sbjct: 61  MQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPG 120

Query: 121 YYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKP 180
           YYDGRYWTMWKLPMFGCTD++QV++E+EEAKK YP +FIR+IGFDNVRQVQCISFI YKP
Sbjct: 121 YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 180

Query: 181 PKF 182
             F
Sbjct: 181 AGF 183

[Close]

BLAST of CcUC05G104890 vs. ExPASy Swiss-Prot
Match: Q02980 (Ribulose bisphosphate carboxylase small subunit, chloroplastic OS=Malus sp. OX=3751 GN=RBCS PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 6.1e-81
Identity = 141/183 (77.05%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 1   MASSIVSSAAVASV--NRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQC 60
           MASS++SS  VA+V  +R +PAQA MVAPFTGLKS +A P+TRK+NDIT++ASNGGRVQC
Sbjct: 1   MASSMISSGTVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSNDITSIASNGGRVQC 60

Query: 61  MKVWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPG 120
           M+VWPPLGLKKFETLSYLP L    LAKEV+YLLRK WVPCLEF++  GFVYRENHRSPG
Sbjct: 61  MQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPG 120

Query: 121 YYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKP 180
           YYDGRYWTMWKLPMFGCTD++QV++E+EEAKK YP +FIR+IGFDNVRQVQCISFI YKP
Sbjct: 121 YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 180

Query: 181 PKF 182
             F
Sbjct: 181 AGF 183

[Close]

BLAST of CcUC05G104890 vs. ExPASy Swiss-Prot
Match: P00865 (Ribulose bisphosphate carboxylase small subunit, chloroplastic 1 OS=Glycine max OX=3847 GN=RBCS1 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 8.8e-80
Identity = 139/181 (76.80%), Postives = 159/181 (87.85%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMK 60
           MASS++SS AV +VNRA    A MVAPFTGLKS A FP  + NNDIT++ASNGGRVQCM+
Sbjct: 1   MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQ 60

Query: 61  VWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGYY 120
           VWPP+G KKFETLSYLPDLD AQLAKEVEYLLRKGW+PCLEF++  GFVYRE++RSP YY
Sbjct: 61  VWPPIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSPXYY 120

Query: 121 DGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPK 180
           DGRYWTMWKLPMFGCTDA+QV++E++EAK  YP+ FIR+IGFDNVRQVQCISFI YKPP 
Sbjct: 121 DGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPG 178

Query: 181 F 182
           F
Sbjct: 181 F 178

[Close]

BLAST of CcUC05G104890 vs. ExPASy Swiss-Prot
Match: Q42823 (Ribulose bisphosphate carboxylase small subunit, chloroplastic OS=Glycine tabacina OX=44016 GN=RBCS PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.5e-79
Identity = 139/181 (76.80%), Postives = 157/181 (86.74%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMK 60
           MASS++SS AV +VNRA    A  VAPFTGLKS A FP  + NNDI ++ASNGGRVQCM+
Sbjct: 1   MASSMISSPAVTTVNRAG---AGTVAPFTGLKSMAGFPTRKTNNDIASIASNGGRVQCMQ 60

Query: 61  VWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGYY 120
           VWP  G KKFETLSYLPDLD AQLAKEVEYLLRKGW+PCLEF++  GFVYRE+HRSPGYY
Sbjct: 61  VWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHHRSPGYY 120

Query: 121 DGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPK 180
           DGRYWTMWKLPMFGCTDA+QV++E++EAK  YP+AFIR+IGFDNVRQVQCISFI YKPP 
Sbjct: 121 DGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNAFIRIIGFDNVRQVQCISFIAYKPPS 178

Query: 181 F 182
           F
Sbjct: 181 F 178

[Close]

BLAST of CcUC05G104890 vs. ExPASy TrEMBL
Match: A0A5D3CCQ3 (Ribulose bisphosphate carboxylase small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001010 PE=3 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.2e-92
Identity = 161/184 (87.50%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMK 60
           MASSI+SSAAVASVN ASPAQASMVAPFTGLKS AAFP+TRKNNDITTLASNGGRVQCMK
Sbjct: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMK 60

Query: 61  VWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGYY 120
           VWPPLGLKKFETLSYLPD+   QL KEV+YLLRKGW+PC+EFD+H GFVYRENHRSPGYY
Sbjct: 61  VWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYY 120

Query: 121 DGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPK 180
           DGRYWTMWKLPMFGCTD++QV+ EIEEAKK YPDA+IRVIGFDNVRQVQCISFI YKPP+
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPR 180

Query: 181 FYSS 185
           FY+S
Sbjct: 181 FYTS 184

[Close]

BLAST of CcUC05G104890 vs. ExPASy TrEMBL
Match: A0A1S3BG44 (Ribulose bisphosphate carboxylase small subunit OS=Cucumis melo OX=3656 GN=LOC103489286 PE=3 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.2e-92
Identity = 161/184 (87.50%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMK 60
           MASSI+SSAAVASVN ASPAQASMVAPFTGLKS AAFP+TRKNNDITTLASNGGRVQCMK
Sbjct: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMK 60

Query: 61  VWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGYY 120
           VWPPLGLKKFETLSYLPD+   QL KEV+YLLRKGW+PC+EFD+H GFVYRENHRSPGYY
Sbjct: 61  VWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYY 120

Query: 121 DGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPK 180
           DGRYWTMWKLPMFGCTD++QV+ EIEEAKK YPDA+IRVIGFDNVRQVQCISFI YKPP+
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPR 180

Query: 181 FYSS 185
           FY+S
Sbjct: 181 FYTS 184

[Close]

BLAST of CcUC05G104890 vs. ExPASy TrEMBL
Match: A0A0A0KR46 (Ribulose bisphosphate carboxylase small subunit OS=Cucumis sativus OX=3659 GN=rbcS PE=3 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.2e-89
Identity = 161/185 (87.03%), Postives = 172/185 (92.97%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNN-DITTLASNGGRVQCM 60
           MASSI+SSAAVASVN ASPAQASMVAPFTGLKS A FPITRKNN DITTLASNGG+VQCM
Sbjct: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNGGKVQCM 60

Query: 61  KVWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGY 120
           KVWPPLGL+KFETLSYLPD+   QL+KE +YLLR GWVPC+EFD+  GFVYRENHRSPGY
Sbjct: 61  KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGY 120

Query: 121 YDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPP 180
           YDGRYWTMWKLPMFGCTD++QVIQEIEEAKK YPDAFIRVIGFDNVRQVQCISFI YKPP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKPP 180

Query: 181 KFYSS 185
           +FYSS
Sbjct: 181 RFYSS 185

[Close]

BLAST of CcUC05G104890 vs. ExPASy TrEMBL
Match: A0A5P8U3Q4 (Ribulose bisphosphate carboxylase small subunit OS=Cucumis x hytivus OX=442738 GN=rbcS PE=3 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.2e-89
Identity = 161/185 (87.03%), Postives = 172/185 (92.97%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNN-DITTLASNGGRVQCM 60
           MASSI+SSAAVASVN ASPAQASMVAPFTGLKS A FPITRKNN DITTLASNGG+VQCM
Sbjct: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNGGKVQCM 60

Query: 61  KVWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGY 120
           KVWPPLGL+KFETLSYLPD+   QL+KE +YLLR GWVPC+EFD+  GFVYRENHRSPGY
Sbjct: 61  KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGY 120

Query: 121 YDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPP 180
           YDGRYWTMWKLPMFGCTD++QVIQEIEEAKK YPDAFIRVIGFDNVRQVQCISFI YKPP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKPP 180

Query: 181 KFYSS 185
           +FYSS
Sbjct: 181 RFYSS 185

[Close]

BLAST of CcUC05G104890 vs. ExPASy TrEMBL
Match: H8WR56 (Ribulose bisphosphate carboxylase small subunit OS=Cucumis sativus OX=3659 GN=ruBisCO PE=2 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.3e-89
Identity = 160/185 (86.49%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNN-DITTLASNGGRVQCM 60
           MASSI+SSA VASVN ASPAQASMVAPFTGLKS A FPITRKNN DITTLASNGG+VQCM
Sbjct: 1   MASSILSSAVVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNGGKVQCM 60

Query: 61  KVWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGY 120
           KVWPPLGL+KFETLSYLPD+   QL+KE +YLLR GWVPC+EFD+  GFVYRENHRSPGY
Sbjct: 61  KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGY 120

Query: 121 YDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPP 180
           YDGRYWTMWKLPMFGCTD++QVIQEIEEAKK YPDAFIRVIGFDNVRQVQCISFI YKPP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKPP 180

Query: 181 KFYSS 185
           +FYSS
Sbjct: 181 RFYSS 185

[Close]

BLAST of CcUC05G104890 vs. TAIR 10
Match: AT5G38410.1 (Ribulose bisphosphate carboxylase (small chain) family protein )

HSP 1 Score: 290.0 bits (741), Expect = 1.3e-78
Identity = 135/182 (74.18%), Postives = 157/182 (86.26%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRK-NNDITTLASNGGRVQCM 60
           MASS++SSAAV +    SPAQA+MVAPFTGLKS AAFP+TRK N DIT++ASNGGRV CM
Sbjct: 1   MASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCM 60

Query: 61  KVWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGY 120
           KVWPP+G KKFETLSYLPDL   +LAKEV+YLLR  W+PC+EF++  GFVYRE+  +PGY
Sbjct: 61  KVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGY 120

Query: 121 YDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPP 180
           YDGRYWTMWKLP+FGCTD+AQV++E+EE KK YP AFIR+IGFDN RQVQCISFI YKPP
Sbjct: 121 YDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 178

Query: 181 KF 182
            F
Sbjct: 181 SF 178

[Close]

BLAST of CcUC05G104890 vs. TAIR 10
Match: AT5G38430.1 (Ribulose bisphosphate carboxylase (small chain) family protein )

HSP 1 Score: 289.3 bits (739), Expect = 2.2e-78
Identity = 134/182 (73.63%), Postives = 157/182 (86.26%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRK-NNDITTLASNGGRVQCM 60
           MASS++SSAAV +    SPAQA+MVAPFTGLKS A+FP+TRK NNDIT++ SNGGRV CM
Sbjct: 1   MASSMLSSAAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCM 60

Query: 61  KVWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGY 120
           KVWPP+G KKFETLSYLPDL   +LAKEV+YLLR  W+PC+EF++  GFVYRE+  +PGY
Sbjct: 61  KVWPPIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGY 120

Query: 121 YDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPP 180
           YDGRYWTMWKLP+FGCTD+AQV++E+EE KK YP AFIR+IGFDN RQVQCISFI YKPP
Sbjct: 121 YDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 178

Query: 181 KF 182
            F
Sbjct: 181 SF 178

[Close]

BLAST of CcUC05G104890 vs. TAIR 10
Match: AT5G38420.1 (Ribulose bisphosphate carboxylase (small chain) family protein )

HSP 1 Score: 287.3 bits (734), Expect = 8.4e-78
Identity = 133/182 (73.08%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRK-NNDITTLASNGGRVQCM 60
           MASS+ SS AV +    SPAQA+MVAPFTGLKS A+FP+TRK NNDIT++ SNGGRV CM
Sbjct: 1   MASSMFSSTAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCM 60

Query: 61  KVWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGY 120
           KVWPP+G KKFETLSYLPDL   +LAKEV+YLLR  W+PC+EF++  GFVYRE+  +PGY
Sbjct: 61  KVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGY 120

Query: 121 YDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPP 180
           YDGRYWTMWKLP+FGCTD+AQV++E+EE KK YP AFIR+IGFDN RQVQCISFI YKPP
Sbjct: 121 YDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 178

Query: 181 KF 182
            F
Sbjct: 181 SF 178

[Close]

BLAST of CcUC05G104890 vs. TAIR 10
Match: AT1G67090.1 (ribulose bisphosphate carboxylase small chain 1A )

HSP 1 Score: 285.0 bits (728), Expect = 4.2e-77
Identity = 132/182 (72.53%), Postives = 156/182 (85.71%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRK-NNDITTLASNGGRVQCM 60
           MASS++SSA +     ASPAQA+MVAPF GLKS AAFP TRK NNDIT++ SNGGRV CM
Sbjct: 1   MASSMLSSATMV----ASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCM 60

Query: 61  KVWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGY 120
           +VWPP+G KKFETLSYLPDL  ++LAKEV+YL+R  W+PC+EF++  GFVYRE+  SPGY
Sbjct: 61  QVWPPIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGY 120

Query: 121 YDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPP 180
           YDGRYWTMWKLP+FGCTD+AQV++E+EE KK YP+AFIR+IGFDN RQVQCISFI YKPP
Sbjct: 121 YDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPP 178

Query: 181 KF 182
            F
Sbjct: 181 SF 178

[Close]

BLAST of CcUC05G104890 vs. TAIR 10
Match: AT5G38410.3 (Ribulose bisphosphate carboxylase (small chain) family protein )

HSP 1 Score: 283.9 bits (725), Expect = 9.3e-77
Identity = 135/187 (72.19%), Postives = 157/187 (83.96%), Query Frame = 0


Query: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRK-NNDITTLASNGGRVQCM 60
           MASS++SSAAV +    SPAQA+MVAPFTGLKS AAFP+TRK N DIT++ASNGGRV CM
Sbjct: 1   MASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCM 60

Query: 61  KVWPPLGLKKFETLSYLPDLDQAQLAKEVEYLLRKGWVPCLEFDVH-----DGFVYRENH 120
           KVWPP+G KKFETLSYLPDL   +LAKEV+YLLR  W+PC+EF++       GFVYRE+ 
Sbjct: 61  KVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEVINTKHGFVYREHG 120

Query: 121 RSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFI 180
            +PGYYDGRYWTMWKLP+FGCTD+AQV++E+EE KK YP AFIR+IGFDN RQVQCISFI
Sbjct: 121 NTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFI 180

Query: 181 VYKPPKF 182
            YKPP F
Sbjct: 181 AYKPPSF 183

The following BLAST results are available for this feature:

BLAST of CcUC05G104890 vs. NCBI nr


Match Name	E-value	Identity	Description
WP_082711130.1	1.3e-101	99.46	MULTISPECIES: ribulose-1,5-bisphosphate carboxylase small subunit [Bacteria]	[more]
XP_038892640.1	6.2e-99	96.74	ribulose bisphosphate carboxylase small chain, chloroplastic-like [Benincasa his...	[more]
WP_064723948.1	1.2e-97	99.44	ribulose-1,5-bisphosphate carboxylase small subunit, partial [Paenarthrobacter n...	[more]
WP_082918361.1	2.5e-92	87.50	ribulose-1,5-bisphosphate carboxylase small subunit [Pseudoalteromonas sp. MQS00...	[more]
HAP2066367.1	2.1e-91	87.36	hypothetical protein [Escherichia coli]	[more]

BLAST of CcUC05G104890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08474	3.3e-87	86.03	Ribulose bisphosphate carboxylase small subunit, chloroplastic OS=Cucumis sativu...	[more]
P24007	2.1e-81	77.05	Ribulose bisphosphate carboxylase small subunit, chloroplastic OS=Pyrus pyrifoli...	[more]
Q02980	6.1e-81	77.05	Ribulose bisphosphate carboxylase small subunit, chloroplastic OS=Malus sp. OX=3...	[more]
P00865	8.8e-80	76.80	Ribulose bisphosphate carboxylase small subunit, chloroplastic 1 OS=Glycine max ...	[more]
Q42823	1.5e-79	76.80	Ribulose bisphosphate carboxylase small subunit, chloroplastic OS=Glycine tabaci...	[more]

BLAST of CcUC05G104890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CCQ3	1.2e-92	87.50	Ribulose bisphosphate carboxylase small subunit OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BG44	1.2e-92	87.50	Ribulose bisphosphate carboxylase small subunit OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KR46	2.2e-89	87.03	Ribulose bisphosphate carboxylase small subunit OS=Cucumis sativus OX=3659 GN=rb...	[more]
A0A5P8U3Q4	2.2e-89	87.03	Ribulose bisphosphate carboxylase small subunit OS=Cucumis x hytivus OX=442738 G...	[more]
H8WR56	6.3e-89	86.49	Ribulose bisphosphate carboxylase small subunit OS=Cucumis sativus OX=3659 GN=ru...	[more]

BLAST of CcUC05G104890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38410.1	1.3e-78	74.18	Ribulose bisphosphate carboxylase (small chain) family protein	[more]
AT5G38430.1	2.2e-78	73.63	Ribulose bisphosphate carboxylase (small chain) family protein	[more]
AT5G38420.1	8.4e-78	73.08	Ribulose bisphosphate carboxylase (small chain) family protein	[more]
AT1G67090.1	4.2e-77	72.53	ribulose bisphosphate carboxylase small chain 1A	[more]
AT5G38410.3	9.3e-77	72.19	Ribulose bisphosphate carboxylase (small chain) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024681	Ribulose bisphosphate carboxylase, small subunit	PRINTS	PR00152	RUBISCOSMALL	coord: 21..38 score: 75.87 coord: 68..94 score: 72.84 coord: 47..65 score: 73.4 coord: 152..178 score: 82.32 coord: 118..147 score: 83.3 coord: 96..111 score: 62.16
IPR000894	Ribulose bisphosphate carboxylase small subunit, domain	SMART	SM00961	RuBisCO_small_2_a	coord: 69..178 e-value: 8.7E-40 score: 148.2
IPR000894	Ribulose bisphosphate carboxylase small subunit, domain	PFAM	PF00101	RuBisCO_small	coord: 70..178 e-value: 7.0E-40 score: 134.9
IPR000894	Ribulose bisphosphate carboxylase small subunit, domain	CDD	cd03527	RuBisCO_small	coord: 68..178 e-value: 1.73602E-60 score: 181.301
IPR024680	Ribulose-1,5-bisphosphate carboxylase small subunit, N-terminal	PFAM	PF12338	RbcS	coord: 2..44 e-value: 3.7E-24 score: 84.6
IPR036385	Ribulose bisphosphate carboxylase, small subunit superfamily	GENE3D	3.30.190.10	Ribulose bisphosphate carboxylase, small subunit	coord: 59..184 e-value: 1.6E-61 score: 207.8
IPR036385	Ribulose bisphosphate carboxylase, small subunit superfamily	SUPERFAMILY	55239	RuBisCO, small subunit	coord: 59..179
None	No IPR available	PANTHER	PTHR31262:SF14	RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1, CHLOROPLASTIC	coord: 1..179
None	No IPR available	PANTHER	PTHR31262	RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1, CHLOROPLASTIC	coord: 1..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G104890.1	CcUC05G104890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009853	photorespiration
biological_process	GO:0019253	reductive pentose-phosphate cycle
cellular_component	GO:0009507	chloroplast