CcUC05G104650 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G104650
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Auxin-responsive protein
Location	CicolChr05: 32292524 .. 32294825 (+)
RNA-Seq Expression	CcUC05G104650
Synteny	CcUC05G104650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAATAATAATAATGAGTTGATTATGAACAATAACTCTGTTTATTGTGAAGGGAAAGGGGAAAATGGGATTATAGATTTGGGGTTGAGCCTAAGAACTTTGGAGCAGCCAGAAGTGGGAATAGAAGGAGGAGGGTACATGAATTGGGGAGGACAGGAGGATTACTATTGTTGTAGTAATGAGGAAGATGCAGAGGTTGTGCAGAGCAAACAACAGCAGAGGTGGGCTTATGTTAAAGTCAATATGGATGGTGTCATTGTTGGTAGGAAAGTTTGCATCTTTCAACATGCTACCTATTCCACTCTTGCCCTTCAGCTTGAAGACATGTTTGGTAACTTAATCTTTACATTTAATTTACTCTCTCACTCGTTAAACTAGGTTCGAATTGACTAAGTCTGTGATATTTGTCGATAGTTGAGCTGAGATTTATGCTAACTTTACTAGAATGGGAGCTACTAAGTTAAATTTTATTATTATGTAACTAATTTTGATGAAAAACTCAACTTCAAATGAATACTTTTAAGATTTATTGAAAGTAACATTTAATAGGAGTATAAAATTATACCCCTTTTTAATAAAGATTTTGTTGAAGAAATTGACACAAAAGAAAAGAGAGACAATCACTTGAAAGAAAGAAACTTTTATTAAAAATGTACAAAGATCGACATTTTTGGGAGAATACTTTTACACTCTCTCAACATCACACTCACTCACTTGTCTTTACTTTTAGGTTTACTAACTTTATAGCTTTGTTTGGCTCCCACATAGAGCCACACCTCCTATTTATAGGCATAAGATCGTTGAAATCAAAGTAAAAGAATCTCTCTAGATTTTGTTGGATTCTACAAATATTTTAGATATTTCTTAGATTCGCCTAAAGAAAGCCTAAGATATTTCTACATATTTTCTTTCGATATATTTATTTATAATCTTCTAGATAAATTTAGAGATATTTAGTATTTATACTTTAGCTATTTATGTTGATACTTCAAGATGTTTCTAGAATCGTTAGCATTTCTTATATTTTAACATCTCAGCTCAACCAATATAATATTATCTAGATTTGAGGTACCTCTTGTATGATGGTTCCTTTTTTTTTTCTTTTTTTTTTCTATTTTTTCTTGTACAACAAATGGGATAAGAATATTTAAACATACAAAGATTTCTAAGAGCATCAACAAATGGGATGGGGCCTCTCTTTCTTGGAGCTTACTCTCTAAGTTTTTATTTATTTCTTGTTTTTATTTAGGATTATAACAAAGAAAAAAACCAAAAGGACAAAGGCCCCATAATGTAGCATTCTTGTCATTTTTTTTTTTTTTTTGAAAATAATGAAATAATGAAAACAACACTTTATATTGAAGATCAAGATCCTTTAATTGTTTGATTCATACCCAATAATTAATTAGCACTCCAAAAGATGTTCTAGAAAATTGTTGCAATTAATATGGCGATCTCATGTCTAATGATACGACCATTCTTTCTTCCATTTATAATTATAGAAGAAAGATTGAGCATGCTACTATTTGTATCCCAAAAACATATATCTATATCATCATCTTAGGTAAATATTTATATGTTTGTCTATGTGTTTATTGATTGGATTAGGTCGACAATGTGAATCTGGACTGAGGTTATTTGAAAATGATTCTGAATTCTCACTATTTTACAAAGATGGAGATGAAAATTGGAGGAGGGTTGGTGATGTCCCATGGAAGTATGTTCTATATCTTGTCATTCTCAAACATATACTTGACATATTTACACATCTATTAAAAGTGATTTTCAGACCGTCGTTTCTTTCAATATTTGGTTGTAAACTTTTTAAAATGATTTTCAATGACTTAAGAGCATGTTTGAGAATGATTTTTAAAACAAGTGTTTTAAGCTAAATTATTTAATTAATATTTGACTCCATTGCTAATTGGTTTTGAGATGAAACCCTATGTTATCTAATAAAGTGAAATAAGAGGAGATTTGTTTAATATGAATTAATAGTTTTTTTTTAAAAAAAAAAAAATCATTCACAATAACCTAACAAAAATTACTTGGAAATCACCTCTCAAGTGATTGATCGGAAATCACTTGAAGAAAAGTGATTTTAGACATATTAAAAGTGATTCCAAACATGACCATATGGTTACCTAAACTTGTTTGACTACTTAGCAAACTATATTTATTTTAATCTAATTTGCTCATTTGGTTATGTTGGTTAATGGACAGGCAATTCGTGGAAGGTGTGAAGAGGCTGAGAATTGCTAGGAAAGACGAGGCTTTTGTTGTCATTCATCAAAATTAA

mRNA sequence

ATGGAGAATAATAATAATGAGTTGATTATGAACAATAACTCTGTTTATTGTGAAGGGAAAGGGGAAAATGGGATTATAGATTTGGGGTTGAGCCTAAGAACTTTGGAGCAGCCAGAAGTGGGAATAGAAGGAGGAGGGTACATGAATTGGGGAGGACAGGAGGATTACTATTGTTGTAGTAATGAGGAAGATGCAGAGGTTGTGCAGAGCAAACAACAGCAGAGGTGGGCTTATGTTAAAGTCAATATGGATGGTGTCATTGTTGGTAGGAAAGTTTGCATCTTTCAACATGCTACCTATTCCACTCTTGCCCTTCAGCTTGAAGACATGTTTGGTCGACAATGTGAATCTGGACTGAGGTTATTTGAAAATGATTCTGAATTCTCACTATTTTACAAAGATGGAGATGAAAATTGGAGGAGGGTTGGTGATGTCCCATGGAAGCAATTCGTGGAAGGTGTGAAGAGGCTGAGAATTGCTAGGAAAGACGAGGCTTTTGTTGTCATTCATCAAAATTAA

Coding sequence (CDS)

ATGGAGAATAATAATAATGAGTTGATTATGAACAATAACTCTGTTTATTGTGAAGGGAAAGGGGAAAATGGGATTATAGATTTGGGGTTGAGCCTAAGAACTTTGGAGCAGCCAGAAGTGGGAATAGAAGGAGGAGGGTACATGAATTGGGGAGGACAGGAGGATTACTATTGTTGTAGTAATGAGGAAGATGCAGAGGTTGTGCAGAGCAAACAACAGCAGAGGTGGGCTTATGTTAAAGTCAATATGGATGGTGTCATTGTTGGTAGGAAAGTTTGCATCTTTCAACATGCTACCTATTCCACTCTTGCCCTTCAGCTTGAAGACATGTTTGGTCGACAATGTGAATCTGGACTGAGGTTATTTGAAAATGATTCTGAATTCTCACTATTTTACAAAGATGGAGATGAAAATTGGAGGAGGGTTGGTGATGTCCCATGGAAGCAATTCGTGGAAGGTGTGAAGAGGCTGAGAATTGCTAGGAAAGACGAGGCTTTTGTTGTCATTCATCAAAATTAA

Protein sequence

MENNNNELIMNNNSVYCEGKGENGIIDLGLSLRTLEQPEVGIEGGGYMNWGGQEDYYCCSNEEDAEVVQSKQQQRWAYVKVNMDGVIVGRKVCIFQHATYSTLALQLEDMFGRQCESGLRLFENDSEFSLFYKDGDENWRRVGDVPWKQFVEGVKRLRIARKDEAFVVIHQN

Homology

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BLAST of CcUC05G104650 vs. NCBI nr
Match: XP_038893192.1 (auxin-responsive protein IAA32-like [Benincasa hispida])

HSP 1 Score: 312.0 bits (798), Expect = 3.2e-81
Identity = 157/169 (92.90%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 4   NNNELIMNNNSVYCEGKGENGIIDLGLSLRTLEQPEVGIEGGGYMNWGGQEDYYCCSNEE 63
           +NNELIM NN VYCEGKGENGIIDLGLSLRTLEQPEVGIE GGYMNWGGQ DYYCC+ EE
Sbjct: 3   SNNELIM-NNPVYCEGKGENGIIDLGLSLRTLEQPEVGIE-GGYMNWGGQ-DYYCCT-EE 62

Query: 64  DAEVVQSKQQQRWAYVKVNMDGVIVGRKVCIFQHATYSTLALQLEDMFGRQCESGLRLFE 123
           DAEVVQSKQQQRW YVKVNMDGVIVGRKVCIFQHA+YSTLALQLEDMFGRQCESGLRLFE
Sbjct: 63  DAEVVQSKQQQRWDYVKVNMDGVIVGRKVCIFQHASYSTLALQLEDMFGRQCESGLRLFE 122

Query: 124 NDSEFSLFYKDGDENWRRVGDVPWKQFVEGVKRLRIARKDEAFVVIHQN 173
           NDSEFSLFYKDGDENWR VGDVPWKQFVEGVKRLRIARKDEAFV I QN
Sbjct: 123 NDSEFSLFYKDGDENWRSVGDVPWKQFVEGVKRLRIARKDEAFVAIRQN 167

[Close]

BLAST of CcUC05G104650 vs. NCBI nr
Match: XP_004135388.1 (auxin-responsive protein IAA32 [Cucumis sativus] >KGN52109.1 hypothetical protein Csa_008762 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 1.5e-75
Identity = 149/175 (85.14%), Postives = 162/175 (92.57%), Query Frame = 0


Query: 3   NNNNELIMNNNSVYCEGKGENGIIDLGLSLRTLEQPEVGIEGGGYMNWGGQ-EDYYCCSN 62
           ++NNELIM NNSVYCEGKGENGIIDLGLSLRTLEQPE+GI     MNWGGQ +DYYCC++
Sbjct: 4   HDNNELIM-NNSVYCEGKGENGIIDLGLSLRTLEQPEMGI-----MNWGGQDQDYYCCTD 63

Query: 63  EED---AEVVQSKQQ-QRWAYVKVNMDGVIVGRKVCIFQHATYSTLALQLEDMFGRQCES 122
           +E+    +VVQSK+Q Q+WAYVKVNMDGVIVGRKVCIFQ+A+YSTLALQLEDMFGRQCES
Sbjct: 64  QEEDHTDQVVQSKEQHQKWAYVKVNMDGVIVGRKVCIFQNASYSTLALQLEDMFGRQCES 123

Query: 123 GLRLFENDSEFSLFYKDGDENWRRVGDVPWKQFVEGVKRLRIARKDEAFVVIHQN 173
           GLRLFENDSEFSLFYKDGDENWR VGDVPWKQFVEGVKRLRIARKDEAFVVIHQN
Sbjct: 124 GLRLFENDSEFSLFYKDGDENWRSVGDVPWKQFVEGVKRLRIARKDEAFVVIHQN 172

[Close]

BLAST of CcUC05G104650 vs. NCBI nr
Match: XP_008446639.1 (PREDICTED: auxin-responsive protein IAA32 [Cucumis melo] >KAA0034586.1 auxin-responsive protein IAA32 [Cucumis melo var. makuwa] >TYK09138.1 auxin-responsive protein IAA32 [Cucumis melo var. makuwa])

HSP 1 Score: 293.1 bits (749), Expect = 1.5e-75
Identity = 149/175 (85.14%), Postives = 162/175 (92.57%), Query Frame = 0


Query: 3   NNNNELIMNNNSVYCEGKGENGIIDLGLSLRTLEQPEVGIEGGGYMNWGGQ-EDYYCCSN 62
           ++NNELIM NNSVYCEGKGENGIIDLGLSLRTLEQPE+GI     MNWGGQ +DYYCC++
Sbjct: 4   HDNNELIM-NNSVYCEGKGENGIIDLGLSLRTLEQPEMGI-----MNWGGQDQDYYCCTD 63

Query: 63  EED---AEVVQSKQQ-QRWAYVKVNMDGVIVGRKVCIFQHATYSTLALQLEDMFGRQCES 122
           +E+    +VVQSK+Q Q+WAYVKVNMDGVIVGRKVCIFQ+A+YSTLALQLEDMFGRQCES
Sbjct: 64  QEEDHTDQVVQSKEQHQKWAYVKVNMDGVIVGRKVCIFQNASYSTLALQLEDMFGRQCES 123

Query: 123 GLRLFENDSEFSLFYKDGDENWRRVGDVPWKQFVEGVKRLRIARKDEAFVVIHQN 173
           GLRLFENDSEFSLFYKDGDENWR VGDVPWKQFVEGVKRLRIARKDEAFVVIHQN
Sbjct: 124 GLRLFENDSEFSLFYKDGDENWRSVGDVPWKQFVEGVKRLRIARKDEAFVVIHQN 172

[Close]

BLAST of CcUC05G104650 vs. NCBI nr
Match: XP_022986212.1 (auxin-responsive protein IAA32-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 255.4 bits (651), Expect = 3.6e-64
Identity = 135/199 (67.84%), Postives = 143/199 (71.86%), Query Frame = 0


Query: 11  NNNSVYCEGKGENGIIDLGLSLRTLEQPEV--GIEGGGY-----MNWGG----------- 70
           N  SVYCEGKGENG IDLGLSLRTL QPEV   IEG G      MNWG            
Sbjct: 4   NQFSVYCEGKGENGSIDLGLSLRTL-QPEVVGSIEGYGEEDEHGMNWGAADHTAADLYMN 63

Query: 71  -------------------QEDYYCCSNEEDAEVVQSKQQQRWAYVKVNMDGVIVGRKVC 130
                              ++DYYCC  EE+AE V   +QQRWAYVKVNMDGVIVGRKVC
Sbjct: 64  MNININMKHSNNNNGVVVVEQDYYCCEEEEEAEEVVQSKQQRWAYVKVNMDGVIVGRKVC 123

Query: 131 IFQHATYSTLALQLEDMFGRQCESGLRLFENDSEFSLFYKDGDENWRRVGDVPWKQFVEG 173
           IFQH +YS+LALQLEDMFGRQCESGL+LFEN+SEFSLFYKDGDENWR VGDVPWKQFVE 
Sbjct: 124 IFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVED 183

[Close]

BLAST of CcUC05G104650 vs. NCBI nr
Match: XP_022957191.1 (auxin-responsive protein IAA32-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 254.2 bits (648), Expect = 7.9e-64
Identity = 134/197 (68.02%), Postives = 142/197 (72.08%), Query Frame = 0


Query: 11  NNNSVYCEGKGENGIIDLGLSLRTLEQPEV--GIEGGGY-----MNWGG----------- 70
           N  SVYCEGKGENG IDLGLSLRTL QPEV   IEG G      +NWG            
Sbjct: 4   NQFSVYCEGKGENGSIDLGLSLRTL-QPEVVGSIEGYGEEDEHGINWGAADHTAADLYMN 63

Query: 71  -----------------QEDYYCCSNEEDAEVVQSKQQQRWAYVKVNMDGVIVGRKVCIF 130
                            ++DYYCC  EE+AE V   +QQRWAYVKVNMDGVIVGRKVCIF
Sbjct: 64  ININMKHSNNNNGVVVVEQDYYCCEEEEEAEEVVQSKQQRWAYVKVNMDGVIVGRKVCIF 123

Query: 131 QHATYSTLALQLEDMFGRQCESGLRLFENDSEFSLFYKDGDENWRRVGDVPWKQFVEGVK 173
           QH +YS LALQLEDMFGRQCESGL+LFEN+SEFSLFYKDGDENWR VGDVPWKQFVE VK
Sbjct: 124 QHGSYSNLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVK 183

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BLAST of CcUC05G104650 vs. ExPASy Swiss-Prot
Match: Q8RYC6 (Auxin-responsive protein IAA32 OS=Arabidopsis thaliana OX=3702 GN=IAA32 PE=1 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 4.0e-34
Identity = 76/173 (43.93%), Postives = 107/173 (61.85%), Query Frame = 0


Query: 13  NSVYCEGKGENGIIDLGLSLRTLEQPE-------VGIEGGGYMNWGGQEDYYCCSNEEDA 72
           ++ Y + K   G+IDLGLSLRT++          +G++G G +    Q  Y   +  +  
Sbjct: 17  HTYYSQTKKGGGVIDLGLSLRTIQHETYLPPARMIGLDGYGELIDWSQPSYNSITQLKSE 76

Query: 73  EVVQSKQQQ-----------RWAYVKVNMDGVIVGRKVCIFQHATYSTLALQLEDMFGRQ 132
           +    +  Q           ++AYVKVN+DG++VGRKVC+     Y+TLALQL DMFG Q
Sbjct: 77  DTGHQRLAQGYYNNEGESRGKYAYVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMFGMQ 136

Query: 133 CESGLRLFENDSEFSLFYKDGDENWRRVGDVPWKQFVEGVKRLRIARKDEAFV 168
             SGLRLF+ +SEFSL Y+D +  WR VGDVPWK+FVE V R+RIAR+++A +
Sbjct: 137 TVSGLRLFQTESEFSLVYRDREGIWRNVGDVPWKEFVESVDRMRIARRNDALL 189

[Close]

BLAST of CcUC05G104650 vs. ExPASy Swiss-Prot
Match: Q9C5X0 (Auxin-responsive protein IAA34 OS=Arabidopsis thaliana OX=3702 GN=IAA34 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.0e-33
Identity = 72/142 (50.70%), Postives = 92/142 (64.79%), Query Frame = 0


Query: 24  GIIDLGLSLRTLEQPEVGIEGGGYMNWGGQEDYYCCSNEEDAEVVQSKQQQRWAYVKVNM 83
           G+IDLGLSLRT++       G  Y           CSNE          +++W YVKV M
Sbjct: 59  GVIDLGLSLRTIQHEIYHSSGQRY-----------CSNE--------GYRRKWGYVKVTM 118

Query: 84  DGVIVGRKVCIFQHATYSTLALQLEDMFGRQCESGLRLFENDSEFSLFYKDGDENWRRVG 143
           DG++VGRKVC+  H +YSTLA QLEDMFG Q  SGLRLF+ +SEF L Y+D +  WR  G
Sbjct: 119 DGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVSGLRLFQMESEFCLVYRDEEGLWRNAG 178

Query: 144 DVPWKQFVEGVKRLRIARKDEA 166
           DVPW +F+E V+RLRI R+++A
Sbjct: 179 DVPWNEFIESVERLRITRRNDA 181

[Close]

BLAST of CcUC05G104650 vs. ExPASy Swiss-Prot
Match: A2XB18 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 3.1e-18
Identity = 51/117 (43.59%), Postives = 72/117 (61.54%), Query Frame = 0


Query: 60  SNEEDAEVVQSKQQQRW---AYVKVNMDGVIVGRKVCIFQHATYSTLALQLEDMFGRQ-- 119
           +NE D +  + + +++     +VKVNMDG ++GRKV +  H +Y TLAL LE MF +   
Sbjct: 144 TNESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSI 203

Query: 120 --CES----GLRLFENDSEFSLFYKDGDENWRRVGDVPWKQFVEGVKRLRIARKDEA 166
             C S     L+L +N +E+ L Y+D D +W  VGDVPW+ FV  VKRLRI R  +A
Sbjct: 204 GLCASHNTNSLKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDA 260

[Close]

BLAST of CcUC05G104650 vs. ExPASy Swiss-Prot
Match: Q0DWF2 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 3.1e-18
Identity = 51/117 (43.59%), Postives = 72/117 (61.54%), Query Frame = 0


Query: 60  SNEEDAEVVQSKQQQRW---AYVKVNMDGVIVGRKVCIFQHATYSTLALQLEDMFGRQ-- 119
           +NE D +  + + +++     +VKVNMDG ++GRKV +  H +Y TLAL LE MF +   
Sbjct: 144 TNESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSI 203

Query: 120 --CES----GLRLFENDSEFSLFYKDGDENWRRVGDVPWKQFVEGVKRLRIARKDEA 166
             C S     L+L +N +E+ L Y+D D +W  VGDVPW+ FV  VKRLRI R  +A
Sbjct: 204 GLCASHNTNSLKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDA 260

[Close]

BLAST of CcUC05G104650 vs. ExPASy Swiss-Prot
Match: Q38831 (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 8.9e-18
Identity = 46/98 (46.94%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 78  YVKVNMDGVIVGRKVCIFQHATYSTLALQLEDMFGR----------QCESGLRLFENDSE 137
           ++KVNMDGV +GRKV +  H++Y  LA  LEDMF R          Q    LRL +  SE
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190

Query: 138 FSLFYKDGDENWRRVGDVPWKQFVEGVKRLRIARKDEA 166
           F L Y+D + +W  VGDVPW+ F+  VKRLR+ +  EA
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEA 228

[Close]

BLAST of CcUC05G104650 vs. ExPASy TrEMBL
Match: A0A5D3CD62 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001290 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.5e-76
Identity = 149/175 (85.14%), Postives = 162/175 (92.57%), Query Frame = 0


Query: 3   NNNNELIMNNNSVYCEGKGENGIIDLGLSLRTLEQPEVGIEGGGYMNWGGQ-EDYYCCSN 62
           ++NNELIM NNSVYCEGKGENGIIDLGLSLRTLEQPE+GI     MNWGGQ +DYYCC++
Sbjct: 4   HDNNELIM-NNSVYCEGKGENGIIDLGLSLRTLEQPEMGI-----MNWGGQDQDYYCCTD 63

Query: 63  EED---AEVVQSKQQ-QRWAYVKVNMDGVIVGRKVCIFQHATYSTLALQLEDMFGRQCES 122
           +E+    +VVQSK+Q Q+WAYVKVNMDGVIVGRKVCIFQ+A+YSTLALQLEDMFGRQCES
Sbjct: 64  QEEDHTDQVVQSKEQHQKWAYVKVNMDGVIVGRKVCIFQNASYSTLALQLEDMFGRQCES 123

Query: 123 GLRLFENDSEFSLFYKDGDENWRRVGDVPWKQFVEGVKRLRIARKDEAFVVIHQN 173
           GLRLFENDSEFSLFYKDGDENWR VGDVPWKQFVEGVKRLRIARKDEAFVVIHQN
Sbjct: 124 GLRLFENDSEFSLFYKDGDENWRSVGDVPWKQFVEGVKRLRIARKDEAFVVIHQN 172

[Close]

BLAST of CcUC05G104650 vs. ExPASy TrEMBL
Match: A0A0A0KT91 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_5G610430 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.5e-76
Identity = 149/175 (85.14%), Postives = 162/175 (92.57%), Query Frame = 0


Query: 3   NNNNELIMNNNSVYCEGKGENGIIDLGLSLRTLEQPEVGIEGGGYMNWGGQ-EDYYCCSN 62
           ++NNELIM NNSVYCEGKGENGIIDLGLSLRTLEQPE+GI     MNWGGQ +DYYCC++
Sbjct: 4   HDNNELIM-NNSVYCEGKGENGIIDLGLSLRTLEQPEMGI-----MNWGGQDQDYYCCTD 63

Query: 63  EED---AEVVQSKQQ-QRWAYVKVNMDGVIVGRKVCIFQHATYSTLALQLEDMFGRQCES 122
           +E+    +VVQSK+Q Q+WAYVKVNMDGVIVGRKVCIFQ+A+YSTLALQLEDMFGRQCES
Sbjct: 64  QEEDHTDQVVQSKEQHQKWAYVKVNMDGVIVGRKVCIFQNASYSTLALQLEDMFGRQCES 123

Query: 123 GLRLFENDSEFSLFYKDGDENWRRVGDVPWKQFVEGVKRLRIARKDEAFVVIHQN 173
           GLRLFENDSEFSLFYKDGDENWR VGDVPWKQFVEGVKRLRIARKDEAFVVIHQN
Sbjct: 124 GLRLFENDSEFSLFYKDGDENWRSVGDVPWKQFVEGVKRLRIARKDEAFVVIHQN 172

[Close]

BLAST of CcUC05G104650 vs. ExPASy TrEMBL
Match: A0A1S3BG83 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489310 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.5e-76
Identity = 149/175 (85.14%), Postives = 162/175 (92.57%), Query Frame = 0


Query: 3   NNNNELIMNNNSVYCEGKGENGIIDLGLSLRTLEQPEVGIEGGGYMNWGGQ-EDYYCCSN 62
           ++NNELIM NNSVYCEGKGENGIIDLGLSLRTLEQPE+GI     MNWGGQ +DYYCC++
Sbjct: 4   HDNNELIM-NNSVYCEGKGENGIIDLGLSLRTLEQPEMGI-----MNWGGQDQDYYCCTD 63

Query: 63  EED---AEVVQSKQQ-QRWAYVKVNMDGVIVGRKVCIFQHATYSTLALQLEDMFGRQCES 122
           +E+    +VVQSK+Q Q+WAYVKVNMDGVIVGRKVCIFQ+A+YSTLALQLEDMFGRQCES
Sbjct: 64  QEEDHTDQVVQSKEQHQKWAYVKVNMDGVIVGRKVCIFQNASYSTLALQLEDMFGRQCES 123

Query: 123 GLRLFENDSEFSLFYKDGDENWRRVGDVPWKQFVEGVKRLRIARKDEAFVVIHQN 173
           GLRLFENDSEFSLFYKDGDENWR VGDVPWKQFVEGVKRLRIARKDEAFVVIHQN
Sbjct: 124 GLRLFENDSEFSLFYKDGDENWRSVGDVPWKQFVEGVKRLRIARKDEAFVVIHQN 172

[Close]

BLAST of CcUC05G104650 vs. ExPASy TrEMBL
Match: A0A6J1J6Y8 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111483950 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.7e-64
Identity = 135/199 (67.84%), Postives = 143/199 (71.86%), Query Frame = 0


Query: 11  NNNSVYCEGKGENGIIDLGLSLRTLEQPEV--GIEGGGY-----MNWGG----------- 70
           N  SVYCEGKGENG IDLGLSLRTL QPEV   IEG G      MNWG            
Sbjct: 4   NQFSVYCEGKGENGSIDLGLSLRTL-QPEVVGSIEGYGEEDEHGMNWGAADHTAADLYMN 63

Query: 71  -------------------QEDYYCCSNEEDAEVVQSKQQQRWAYVKVNMDGVIVGRKVC 130
                              ++DYYCC  EE+AE V   +QQRWAYVKVNMDGVIVGRKVC
Sbjct: 64  MNININMKHSNNNNGVVVVEQDYYCCEEEEEAEEVVQSKQQRWAYVKVNMDGVIVGRKVC 123

Query: 131 IFQHATYSTLALQLEDMFGRQCESGLRLFENDSEFSLFYKDGDENWRRVGDVPWKQFVEG 173
           IFQH +YS+LALQLEDMFGRQCESGL+LFEN+SEFSLFYKDGDENWR VGDVPWKQFVE 
Sbjct: 124 IFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVED 183

[Close]

BLAST of CcUC05G104650 vs. ExPASy TrEMBL
Match: A0A6J1GYJ4 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111458660 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.8e-64
Identity = 134/197 (68.02%), Postives = 142/197 (72.08%), Query Frame = 0


Query: 11  NNNSVYCEGKGENGIIDLGLSLRTLEQPEV--GIEGGGY-----MNWGG----------- 70
           N  SVYCEGKGENG IDLGLSLRTL QPEV   IEG G      +NWG            
Sbjct: 4   NQFSVYCEGKGENGSIDLGLSLRTL-QPEVVGSIEGYGEEDEHGINWGAADHTAADLYMN 63

Query: 71  -----------------QEDYYCCSNEEDAEVVQSKQQQRWAYVKVNMDGVIVGRKVCIF 130
                            ++DYYCC  EE+AE V   +QQRWAYVKVNMDGVIVGRKVCIF
Sbjct: 64  ININMKHSNNNNGVVVVEQDYYCCEEEEEAEEVVQSKQQRWAYVKVNMDGVIVGRKVCIF 123

Query: 131 QHATYSTLALQLEDMFGRQCESGLRLFENDSEFSLFYKDGDENWRRVGDVPWKQFVEGVK 173
           QH +YS LALQLEDMFGRQCESGL+LFEN+SEFSLFYKDGDENWR VGDVPWKQFVE VK
Sbjct: 124 QHGSYSNLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVK 183

[Close]

BLAST of CcUC05G104650 vs. TAIR 10
Match: AT2G01200.2 (indole-3-acetic acid inducible 32 )

HSP 1 Score: 146.0 bits (367), Expect = 2.8e-35
Identity = 76/173 (43.93%), Postives = 107/173 (61.85%), Query Frame = 0


Query: 13  NSVYCEGKGENGIIDLGLSLRTLEQPE-------VGIEGGGYMNWGGQEDYYCCSNEEDA 72
           ++ Y + K   G+IDLGLSLRT++          +G++G G +    Q  Y   +  +  
Sbjct: 17  HTYYSQTKKGGGVIDLGLSLRTIQHETYLPPARMIGLDGYGELIDWSQPSYNSITQLKSE 76

Query: 73  EVVQSKQQQ-----------RWAYVKVNMDGVIVGRKVCIFQHATYSTLALQLEDMFGRQ 132
           +    +  Q           ++AYVKVN+DG++VGRKVC+     Y+TLALQL DMFG Q
Sbjct: 77  DTGHQRLAQGYYNNEGESRGKYAYVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMFGMQ 136

Query: 133 CESGLRLFENDSEFSLFYKDGDENWRRVGDVPWKQFVEGVKRLRIARKDEAFV 168
             SGLRLF+ +SEFSL Y+D +  WR VGDVPWK+FVE V R+RIAR+++A +
Sbjct: 137 TVSGLRLFQTESEFSLVYRDREGIWRNVGDVPWKEFVESVDRMRIARRNDALL 189

[Close]

BLAST of CcUC05G104650 vs. TAIR 10
Match: AT1G15050.1 (indole-3-acetic acid inducible 34 )

HSP 1 Score: 143.7 bits (361), Expect = 1.4e-34
Identity = 72/142 (50.70%), Postives = 92/142 (64.79%), Query Frame = 0


Query: 24  GIIDLGLSLRTLEQPEVGIEGGGYMNWGGQEDYYCCSNEEDAEVVQSKQQQRWAYVKVNM 83
           G+IDLGLSLRT++       G  Y           CSNE          +++W YVKV M
Sbjct: 59  GVIDLGLSLRTIQHEIYHSSGQRY-----------CSNE--------GYRRKWGYVKVTM 118

Query: 84  DGVIVGRKVCIFQHATYSTLALQLEDMFGRQCESGLRLFENDSEFSLFYKDGDENWRRVG 143
           DG++VGRKVC+  H +YSTLA QLEDMFG Q  SGLRLF+ +SEF L Y+D +  WR  G
Sbjct: 119 DGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVSGLRLFQMESEFCLVYRDEEGLWRNAG 178

Query: 144 DVPWKQFVEGVKRLRIARKDEA 166
           DVPW +F+E V+RLRI R+++A
Sbjct: 179 DVPWNEFIESVERLRITRRNDA 181

[Close]

BLAST of CcUC05G104650 vs. TAIR 10
Match: AT2G33310.1 (auxin-induced protein 13 )

HSP 1 Score: 91.7 bits (226), Expect = 6.4e-19
Identity = 46/98 (46.94%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 78  YVKVNMDGVIVGRKVCIFQHATYSTLALQLEDMFGR----------QCESGLRLFENDSE 137
           ++KVNMDGV +GRKV +  H++Y  LA  LEDMF R          Q    LRL +  SE
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189

Query: 138 FSLFYKDGDENWRRVGDVPWKQFVEGVKRLRIARKDEA 166
           F L Y+D + +W  VGDVPW+ F+  VKRLR+ +  EA
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEA 227

[Close]

BLAST of CcUC05G104650 vs. TAIR 10
Match: AT2G33310.2 (auxin-induced protein 13 )

HSP 1 Score: 91.7 bits (226), Expect = 6.4e-19
Identity = 46/98 (46.94%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 78  YVKVNMDGVIVGRKVCIFQHATYSTLALQLEDMFGR----------QCESGLRLFENDSE 137
           ++KVNMDGV +GRKV +  H++Y  LA  LEDMF R          Q    LRL +  SE
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190

Query: 138 FSLFYKDGDENWRRVGDVPWKQFVEGVKRLRIARKDEA 166
           F L Y+D + +W  VGDVPW+ F+  VKRLR+ +  EA
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEA 228

[Close]

BLAST of CcUC05G104650 vs. TAIR 10
Match: AT2G33310.3 (auxin-induced protein 13 )

HSP 1 Score: 91.7 bits (226), Expect = 6.4e-19
Identity = 46/98 (46.94%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 78  YVKVNMDGVIVGRKVCIFQHATYSTLALQLEDMFGR----------QCESGLRLFENDSE 137
           ++KVNMDGV +GRKV +  H++Y  LA  LEDMF R          Q    LRL +  SE
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189

Query: 138 FSLFYKDGDENWRRVGDVPWKQFVEGVKRLRIARKDEA 166
           F L Y+D + +W  VGDVPW+ F+  VKRLR+ +  EA
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEA 227

The following BLAST results are available for this feature:

BLAST of CcUC05G104650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893192.1	3.2e-81	92.90	auxin-responsive protein IAA32-like [Benincasa hispida]	[more]
XP_004135388.1	1.5e-75	85.14	auxin-responsive protein IAA32 [Cucumis sativus] >KGN52109.1 hypothetical protei...	[more]
XP_008446639.1	1.5e-75	85.14	PREDICTED: auxin-responsive protein IAA32 [Cucumis melo] >KAA0034586.1 auxin-res...	[more]
XP_022986212.1	3.6e-64	67.84	auxin-responsive protein IAA32-like isoform X2 [Cucurbita maxima]	[more]
XP_022957191.1	7.9e-64	68.02	auxin-responsive protein IAA32-like isoform X2 [Cucurbita moschata]	[more]

BLAST of CcUC05G104650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RYC6	4.0e-34	43.93	Auxin-responsive protein IAA32 OS=Arabidopsis thaliana OX=3702 GN=IAA32 PE=1 SV=...	[more]
Q9C5X0	2.0e-33	50.70	Auxin-responsive protein IAA34 OS=Arabidopsis thaliana OX=3702 GN=IAA34 PE=1 SV=...	[more]
A2XB18	3.1e-18	43.59	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 P...	[more]
Q0DWF2	3.1e-18	43.59	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10...	[more]
Q38831	8.9e-18	46.94	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=...	[more]

BLAST of CcUC05G104650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CD62	7.5e-76	85.14	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0KT91	7.5e-76	85.14	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_5G610430 PE=3 SV=1	[more]
A0A1S3BG83	7.5e-76	85.14	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489310 PE=3 SV=1	[more]
A0A6J1J6Y8	1.7e-64	67.84	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111483950 PE=3 SV=1	[more]
A0A6J1GYJ4	3.8e-64	68.02	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111458660 PE=3 SV=1	[more]

BLAST of CcUC05G104650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01200.2	2.8e-35	43.93	indole-3-acetic acid inducible 32	[more]
AT1G15050.1	1.4e-34	50.70	indole-3-acetic acid inducible 34	[more]
AT2G33310.1	6.4e-19	46.94	auxin-induced protein 13	[more]
AT2G33310.2	6.4e-19	46.94	auxin-induced protein 13	[more]
AT2G33310.3	6.4e-19	46.94	auxin-induced protein 13	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 70..170 e-value: 1.4E-27 score: 97.7
None	No IPR available	PANTHER	PTHR31734:SF114	AUXIN-RESPONSIVE PROTEIN IAA34	coord: 1..167
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 75..159
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 62..166 e-value: 6.0E-24 score: 85.2
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 1..167
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 76..164 score: 18.397699

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G104650.1	CcUC05G104650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding