CcUC05G104540 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G104540
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Sec-independent protein translocase protein TATC
Location	CicolChr05: 32172027 .. 32175976 (-)
RNA-Seq Expression	CcUC05G104540
Synteny	CcUC05G104540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGCTGCCATTGATTTTGATTCCGGAAGCTAAAGAAGAGATGGGAAGCATTAGCGGTGCTCTAACATCGCATTTGCAGCTTAGTCATTGCCGTTTCTCTGCTCGAACCTCTCAGTCTCAGCTTGCTTCAGCTCGAATTAGCCCAACATCGAGAAGGTCGAAGTCGCGACTCACCGGTTTGCTCAGCCGTAGAAATTTCCACAGATTTGTGTGTTCTGCTGTCGATGACGACGTAAGAGAGAAGCAGATGGAGTTGGGTGCTGGAAATGGCTCCACCATCGTTGAAGATGTGCCAGGTATTAGTATTGCCAAAACCTACGTTTCGTCTGAAAATCGTCTTTGGTTATCGTTTGCGAATACCCGAACAACTTTTGGAAGCTTTGTGTGGCAATTTTCCGTTATTAGTATCGGATTAAGAACTAGTGGTCCTTAATTTTGTTTAAAATTTGTACTAGAAATTACTCATGTTCAATAGAGATGTTTGTTCTGGTAAAAACTTTAGATGAGCTTATGTGAGTTCAGGATTTGAAGGGAGAGTTCAATAAGTGGATTTGTTTGGATCCATTAACCAGGAGAGGGAATGTCTTGCTCAACGTTGTTACTTCTCAATTCGCGGATAAAACTTGTTGGGACTCTACATGCTTTCAGATACTTCACTTGTATTTAAATGTTCATTGCATATCTTGATTTCTACCTGTTAAATTATGTGGCTGCAGAAAGTATATGCTAAAATTGGTATACAAGTTCTTAATACCTCATCCTTTTCGTGAAAAAATATTAGATATCGTCGAGAATTCTACAAATGGGGCTCCGGAAAAAAGTGATATATATAACTTTCTCTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTGTCAGTTTTGGCTGTGGGAGCTGCAATTGTTGGGTGCTTTGCATTTTCGAAAGAACTCATCTTACTTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTCTTCTTTACAACATTGAAGGTCAGAACTTTGTATGATGAAATATAATTATATTGCTAGTATAATCGCTTTTATGGATCTGTGACTTCTGAGCATAGTTACCATCCATTTGGATAGCTATAGACGCGAAAATGGCTTATGATACAATCTTGAAAAATGAGAAAAACAAGTTTGACTTTAACCAACTCGACTTTAACTTGGGTGGGTCACTTGGGTCAATGGGTGTGAAATCTTTAAATGCTTGAATTTTATAGTAGTCTAATAGCTTCGACCTTCTTGTTTCATGGTGATTTAACATGAAATTGGAGTAAGAGTTGCCAAGTTGAAATCTTTGCAACATCATCTCTCATTTTCCAACCACTATCACAAACAAGAAGAATCTACCTCGATGTATGTTGAGTACATAGAAAATACATTGTATAATGTTTATTGAATTAGAACTTCTTGCTTATTCTATCAATCTTTCTGGTGTGTGTGTGTGTTGCCGAATACCAAACCACTAGATCCTGTAAAAACTTATGTTCCTCTCTAAGTCAGTGGGTGATACCACTTTGAACTATGCTAAATATTGTTTCTGATATTTGTTCAATTCAAAAATTCATTCTACACTCGCAATATGCAGTTGTATATTTGCTCATGTAGATAGGGGTCAATGACAATAAAATTCTCCTTATGCGCTCCAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGACAGAAAGACAGTTTTTGGCACCTATCGTCCTAGGCTCCTCTATACTTTTCTATGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCGGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTTGTACTTGTTCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTAAAGTTTCATAGGAATGTTGTCCGTTCAGTAAAAGATTCCTACTAATTACTTCTTAGGAACAATCTTAAATCATTGATGATGTTCTGTACGACACCAAATTTCACCCAATTGAGATAAGCTTTTTGACAATGTAAGTTTCATCTTATTTGCAGGTTCCAGTAATACAGATTCTACTTGGACAACTTGGGCTTGTCTCAGGAGACCAAATGCTATCTATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCGGTACTCACACCATCAACAGATCCCCTAACTCAGGTACTTCTGGCAGCTCCCCTGCTCGGCCTTTACTTGGGGGGTGCTTGGGTGGTCAAGCTCTCGGGGCGATAGATTCAACCCTAGTTTTTCAGCTCTGTGACATTTCTGTACATTCACAAAATATTATGGTGTAGTGTAATTGTGACACCAATTAATAGAAAGGGATATTCATTCCATGGATCTTTCTAAAATTACTTCGTTTCTTACATGACAAGAACCAGAGCTAGAGCTATAGTAACAAAACTGGATGTAAATATGGCTACCCACATACATCAAAAATAAGTTGAGGCTGAAGATGTATCTGATTAGATAGAGAATCTCCTTTAGTCGCTTAAAGTTACATTCTGCATTCTACTTTCTACATCAGTAGATGTGAAGTCACCTAGTTCAACCTCGAGCTGCTTCAACGAATTTCGGAGATTGTTGCCTGCCTGAAGAAAGGCTTCCGAATTACCATCAAGACTTCCCAACTCTGCCTGCATGTTGTCAAGAAGGCTAGAGATTTTCTCAGAAGCTACTTTAATGGCAGCGGCCTCTTGTGGGGGGTAAAGACAAGCTCCAAGCTCATCAACCTGCACTCCAATTCCTTGGCATAGCTTCAATAGATTTTCCAAGGACGCTAAGTTATTTTCCTTGTTTACATTTTCCAGCTTAAGCAAACTTGTGATAGAGCGAATGAGTTCCTTTATAACTAGAAGAATTGAAGATACAACACTAATGGCAGATTGAGCAACTCTCATCTCTTCAGCTGACAAATCGTTACCTATATCAGCATCATCGTTTGTATTGCCCTCATCTTGCGAATCGCCTTCAACTCTGTTAGAAGGTTCTTCAGGAGCTTCGTCCAAGTCGGAGGAACCTTGTTTAAGCTCCTTCATTTCTCGAAGGACATCCTTCACTGATACAGCTACCTGGGTTATTGCTCGGCCAATCGCAGTTATATTTGTGGAAGGAGCCTTTTTAAGAGCAGAGCAAGCTTCCCAAACCGCCCCAACCAATAGTGGAACCACTTGGTTTTGATCCTCATTATTCCGTGGTCCTGAAAAAGTTCATTCACCAAGAAAATGGTAAGATAGTTTTATCAAAAGAGGAGAAAGAAAGCGCATTCACTTGTACCATTGTAATGGTAAAATATATATATAGATTATCATTTGGCTTCATGAAAACATGAAGTCACAACAACGTACAAAAGAATTTCACTCTATCATCAATTCTTTTTTCCTGTGATAGGATACGGAGAACTTCATTGATATAACTCACAAGTCACAAGGGGTAATATCAAATGGATCATGGAAAACATTTCCAATGGGCTATAAGGGAGCTTGATAATGGAAACATCAAATAGCTGGAAAAGTAAAACTCTTTAGTCTTTTCTACCCCTCCATGATATTGTAATAGATAATCTACTTTAACATGAACTCAAGGGTACTCCAACTGATATCATGGGAGGTCAACTAATCCTTCATCTTCCACCGAAAACTTCAATTTTTTCCTTTTTGATATCTGTGTTTTCGAGCCAACTTGAATGCACCTCGACTAATCTCATGAGTCTCATATCCTAGATACTAGATAGGTGACTACCATGGATTGAACTCATTCCCTCTATGTTCTTTAATATACCATGCTTCCACAGAC

mRNA sequence

GAAAGCTGCCATTGATTTTGATTCCGGAAGCTAAAGAAGAGATGGGAAGCATTAGCGGTGCTCTAACATCGCATTTGCAGCTTAGTCATTGCCGTTTCTCTGCTCGAACCTCTCAGTCTCAGCTTGCTTCAGCTCGAATTAGCCCAACATCGAGAAGGTCGAAGTCGCGACTCACCGGTTTGCTCAGCCGTAGAAATTTCCACAGATTTGTGTGTTCTGCTGTCGATGACGACGTAAGAGAGAAGCAGATGGAGTTGGGTGCTGGAAATGGCTCCACCATCGTTGAAGATGTGCCAGATATCGTCGAGAATTCTACAAATGGGGCTCCGGAAAAAAGTGATATATATAACTTTCTCTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTGTCAGTTTTGGCTGTGGGAGCTGCAATTGTTGGGTGCTTTGCATTTTCGAAAGAACTCATCTTACTTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTCTTCTTTACAACATTGAAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGACAGAAAGACAGTTTTTGGCACCTATCGTCCTAGGCTCCTCTATACTTTTCTATGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCGGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTTGTACTTGTTCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGATTCTACTTGGACAACTTGGGCTTGTCTCAGGAGACCAAATGCTATCTATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCGGTACTCACACCATCAACAGATCCCCTAACTCAGGTACTTCTGGCAGCTCCCCTGCTCGGCCTTTACTTGGGGGGTGCTTGGGTGGTCAAGCTCTCGGGGCGATAGATTCAACCCTAGTTTTTCAGCTCTGTGACATTTCTGTACATTCACAAAATATTATGGTGTAGTGTAATTGTGACACCAATTAATAGAAAGGGATATTCATTCCATGGATCTTTCTAAAATTACTTCGTTTCTTACATGACAAGAACCAGAGCTAGAGCTATAGTAACAAAACTGGATGTAAATATGGCTACCCACATACATCAAAAATAAGTTGAGGCTGAAGATGTATCTGATTAGATAGAGAATCTCCTTTAGTCGCTTAAAGTTACATTCTGCATTCTACTTTCTACATCAGTAGATGTGAAGTCACCTAGTTCAACCTCGAGCTGCTTCAACGAATTTCGGAGATTGTTGCCTGCCTGAAGAAAGGCTTCCGAATTACCATCAAGACTTCCCAACTCTGCCTGCATGTTGTCAAGAAGGCTAGAGATTTTCTCAGAAGCTACTTTAATGGCAGCGGCCTCTTGTGGGGGGTAAAGACAAGCTCCAAGCTCATCAACCTGCACTCCAATTCCTTGGCATAGCTTCAATAGATTTTCCAAGGACGCTAAGTTATTTTCCTTGTTTACATTTTCCAGCTTAAGCAAACTTGTGATAGAGCGAATGAGTTCCTTTATAACTAGAAGAATTGAAGATACAACACTAATGGCAGATTGAGCAACTCTCATCTCTTCAGCTGACAAATCGTTACCTATATCAGCATCATCGTTTGTATTGCCCTCATCTTGCGAATCGCCTTCAACTCTGTTAGAAGGTTCTTCAGGAGCTTCGTCCAAGTCGGAGGAACCTTGTTTAAGCTCCTTCATTTCTCGAAGGACATCCTTCACTGATACAGCTACCTGGGTTATTGCTCGGCCAATCGCAGTTATATTTGTGGAAGGAGCCTTTTTAAGAGCAGAGCAAGCTTCCCAAACCGCCCCAACCAATAGTGGAACCACTTGGTTTTGATCCTCATTATTCCGTGGTCCTGAAAAAGTTCATTCACCAAGAAAATGGTAAGATAGTTTTATCAAAAGAGGAGAAAGAAAGCGCATTCACTTGTACCATTGTAATGGTAAAATATATATATAGATTATCATTTGGCTTCATGAAAACATGAAGTCACAACAACGTACAAAAGAATTTCACTCTATCATCAATTCTTTTTTCCTGTGATAGGATACGGAGAACTTCATTGATATAACTCACAAGTCACAAGGGGTAATATCAAATGGATCATGGAAAACATTTCCAATGGGCTATAAGGGAGCTTGATAATGGAAACATCAAATAGCTGGAAAAGTAAAACTCTTTAGTCTTTTCTACCCCTCCATGATATTGTAATAGATAATCTACTTTAACATGAACTCAAGGGTACTCCAACTGATATCATGGGAGGTCAACTAATCCTTCATCTTCCACCGAAAACTTCAATTTTTTCCTTTTTGATATCTGTGTTTTCGAGCCAACTTGAATGCACCTCGACTAATCTCATGAGTCTCATATCCTAGATACTAGATAGGTGACTACCATGGATTGAACTCATTCCCTCTATGTTCTTTAATATACCATGCTTCCACAGAC

Coding sequence (CDS)

ATGGGAAGCATTAGCGGTGCTCTAACATCGCATTTGCAGCTTAGTCATTGCCGTTTCTCTGCTCGAACCTCTCAGTCTCAGCTTGCTTCAGCTCGAATTAGCCCAACATCGAGAAGGTCGAAGTCGCGACTCACCGGTTTGCTCAGCCGTAGAAATTTCCACAGATTTGTGTGTTCTGCTGTCGATGACGACGTAAGAGAGAAGCAGATGGAGTTGGGTGCTGGAAATGGCTCCACCATCGTTGAAGATGTGCCAGATATCGTCGAGAATTCTACAAATGGGGCTCCGGAAAAAAGTGATATATATAACTTTCTCTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTGTCAGTTTTGGCTGTGGGAGCTGCAATTGTTGGGTGCTTTGCATTTTCGAAAGAACTCATCTTACTTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTCTTCTTTACAACATTGAAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGACAGAAAGACAGTTTTTGGCACCTATCGTCCTAGGCTCCTCTATACTTTTCTATGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCGGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTTGTACTTGTTCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGATTCTACTTGGACAACTTGGGCTTGTCTCAGGAGACCAAATGCTATCTATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCGGTACTCACACCATCAACAGATCCCCTAACTCAGGTACTTCTGGCAGCTCCCCTGCTCGGCCTTTACTTGGGGGGTGCTTGGGTGGTCAAGCTCTCGGGGCGATAG

Protein sequence

MGSISGALTSHLQLSHCRFSARTSQSQLASARISPTSRRSKSRLTGLLSRRNFHRFVCSAVDDDVREKQMELGAGNGSTIVEDVPDIVENSTNGAPEKSDIYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILLLEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR

Homology

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BLAST of CcUC05G104540 vs. NCBI nr
Match: XP_008446660.1 (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucumis melo] >KAA0034598.1 sec-independent protein translocase protein TATC [Cucumis melo var. makuwa] >TYK09150.1 sec-independent protein translocase protein TATC [Cucumis melo var. makuwa])

HSP 1 Score: 630.2 bits (1624), Expect = 1.1e-176
Identity = 329/347 (94.81%), Postives = 339/347 (97.69%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARISPTSRRSKSRLTGLLSRRNFHRFVCSA 60
           MGSISG+L+SHLQLSHCRFSARTSQSQL S RISPT RR+K RLTG LSRRNF+RFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQMELGAGNGSTIVEDVPDIVENSTNGAPEKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQ ELG GNGST+VEDVPDI +NSTNGAP+KSDIYNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+LILLLEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of CcUC05G104540 vs. NCBI nr
Match: XP_004135073.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucumis sativus] >KGN52124.1 hypothetical protein Csa_008470 [Cucumis sativus])

HSP 1 Score: 625.2 bits (1611), Expect = 3.5e-175
Identity = 328/347 (94.52%), Postives = 337/347 (97.12%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARISPTSRRSKSRLTGLLSRRNFHRFVCSA 60
           MGSISGAL+SHLQLS CRFSARTSQSQL S RISPT RR+K R TGLL RRNF+RFVCSA
Sbjct: 1   MGSISGALSSHLQLSDCRFSARTSQSQLTSVRISPTLRRTKLRFTGLLRRRNFNRFVCSA 60

Query: 61  VDDDVREKQMELGAGNGSTIVEDVPDIVENSTNGAPEKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQ ELG GNGST+VEDVPDI +NSTNGAP+KSDIYNFLYPSKDLLPDD+EMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDREMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAIVGCFAFSK+LILLLEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSY+VLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYVVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of CcUC05G104540 vs. NCBI nr
Match: XP_038892645.1 (sec-independent protein translocase protein TATC, chloroplastic [Benincasa hispida])

HSP 1 Score: 624.8 bits (1610), Expect = 4.5e-175
Identity = 329/347 (94.81%), Postives = 336/347 (96.83%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARISPTSRRSKSRLTGLLSRRNFHRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTSQSQLA A ISPT RRSK R TGLLSR+NF+RFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSQSQLALAPISPTLRRSKLRFTGLLSRKNFNRFVCSA 60

Query: 61  VDDDVREKQMELGAGNGSTIVEDVPDIVENSTNGAPEKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQ ELG G GST+VEDVPDI ENSTNGAPE+SDIYNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGKGSTVVEDVPDIAENSTNGAPERSDIYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELIL+LEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLT+ ERQFLAPIVLGSSILFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTKAERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYA GAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQ+GLVSGDQMLSI
Sbjct: 241 ALNFFVSYAAGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQVGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of CcUC05G104540 vs. NCBI nr
Match: XP_022956650.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita moschata] >KAG7032053.1 Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 622.5 bits (1604), Expect = 2.2e-174
Identity = 325/347 (93.66%), Postives = 336/347 (96.83%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARISPTSRRSKSRLTGLLSRRNFHRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTS SQLASARI PTSRRSK R + LLSRRNF+RFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQMELGAGNGSTIVEDVPDIVENSTNGAPEKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQ +LG GN ST+VEDVPDI E+STNGAPEKSD+YNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKEL+L+LEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of CcUC05G104540 vs. NCBI nr
Match: KAG6601263.1 (Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 622.5 bits (1604), Expect = 2.2e-174
Identity = 325/347 (93.66%), Postives = 336/347 (96.83%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARISPTSRRSKSRLTGLLSRRNFHRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTS SQLASARI PTSRRSK R + LLSRRNF+RFVCSA
Sbjct: 39  MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 98

Query: 61  VDDDVREKQMELGAGNGSTIVEDVPDIVENSTNGAPEKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQ +LG GN ST+VEDVPDI E+STNGAPEKSD+YNFLYPSKDLLPDDKEMSV
Sbjct: 99  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 158

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKEL+L+LEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 159 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 218

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSYIVLTPA
Sbjct: 219 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 278

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 279 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 338

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 339 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 385

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BLAST of CcUC05G104540 vs. ExPASy Swiss-Prot
Match: Q94G17 (Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum OX=3888 GN=TATC PE=1 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 3.4e-125
Identity = 232/314 (73.89%), Postives = 273/314 (86.94%), Query Frame = 0


Query: 47  LLSRRNFHRFVCSAVDDDVREKQMELGAGNGSTI---VEDVP---DIVENSTNGA----- 106
           L   ++F R VC AVDD++REKQ +  + + + +   VE+ P   D+++  +  A     
Sbjct: 40  LRKNKSFDRLVCFAVDDEIREKQQQQLSTSSTRLGSAVEERPENKDMIDGISEEALENFK 99

Query: 107 --PEKSDIYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKELI 166
              E+S IY+FLYPSK+LLPDDKEMS+FDHLEELR+RIF+SVL VG +I+GCFAFSK+L+
Sbjct: 100 EDGERSAIYDFLYPSKELLPDDKEMSIFDHLEELRERIFISVLGVGGSILGCFAFSKDLV 159

Query: 167 LLLEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQ 226
            +LEAPVK +GVRFLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAF++PGLT+ ER+
Sbjct: 160 KILEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFIIPGLTKEERK 219

Query: 227 FLAPIVLGSSILFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFST 286
           FL PIVLGSS+LFYAGI FSY+VL PAALNFFV+YAEGAVESLWSIDQYFEFVLVLMFST
Sbjct: 220 FLGPIVLGSSVLFYAGITFSYLVLVPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFST 279

Query: 287 GLSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLG 346
           GLSFQVP+IQ+LLGQLGLVSGD+MLS+WRYVVVGAVVAAAV+TPSTDPLTQVLLAAPLLG
Sbjct: 280 GLSFQVPIIQLLLGQLGLVSGDKMLSVWRYVVVGAVVAAAVVTPSTDPLTQVLLAAPLLG 339

Query: 347 LYLGGAWVVKLSGR 348
           LYLGGAW+VKL+GR
Sbjct: 340 LYLGGAWMVKLAGR 353

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BLAST of CcUC05G104540 vs. ExPASy Swiss-Prot
Match: C4IZX0 (Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays OX=4577 GN=TATC PE=2 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.3e-121
Identity = 235/309 (76.05%), Postives = 261/309 (84.47%), Query Frame = 0


Query: 50  RRNFHRFVCSAVDDD--VREK----QMELGAGNGSTIVEDVP--DIVENSTNGAP---EK 109
           RR      C+AVD D  +RE     Q E  +      +ED P    VEN + G P   E+
Sbjct: 48  RRRRQCLRCAAVDGDGALRESGPLPQKESPSSGIGAALEDPPPGPPVENGSFGGPSQEEQ 107

Query: 110 SDIYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILLLEA 169
           S +Y FLYPSKDLLPDDKEMS+FDHLEELR RIF+SVLAVGAAI+GCFAFSK+L++ LEA
Sbjct: 108 SALYTFLYPSKDLLPDDKEMSIFDHLEELRDRIFISVLAVGAAILGCFAFSKDLVIFLEA 167

Query: 170 PVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPI 229
           PV  QGVRFLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFV+PGLTR ER+FL PI
Sbjct: 168 PVTAQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRDERKFLGPI 227

Query: 230 VLGSSILFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQ 289
           VLGSS+LFY GI FSY VL+PAALNFFV+YA+GAVESLWSIDQYFEF+LVLMFSTGLSFQ
Sbjct: 228 VLGSSVLFYLGIFFSYTVLSPAALNFFVNYADGAVESLWSIDQYFEFILVLMFSTGLSFQ 287

Query: 290 VPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGG 348
           VPVIQ+LLGQLGLVS DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLLGLYLGG
Sbjct: 288 VPVIQLLLGQLGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGG 347

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BLAST of CcUC05G104540 vs. ExPASy Swiss-Prot
Match: Q9AVE6 (Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TATC PE=2 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 5.6e-120
Identity = 235/315 (74.60%), Postives = 264/315 (83.81%), Query Frame = 0


Query: 48  LSRRNFHRFVCSAVDDDV-RE---------KQMELGAGN-GSTIVEDVPDIVENSTNGA- 107
           LS R+     C+AVD    RE         ++ E  +G+ G+ + +  P  V+N + G  
Sbjct: 45  LSCRHGRHLRCAAVDGGAGRETERPSPPAPQREESPSGSLGAALEDPSPQPVQNGSFGGI 104

Query: 108 ---PEKSDIYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKEL 167
               E+S +YNFLYPSK+LLPDDKEMS+FDHLEELR RIFVSVLAVGAAI+GCFA+SK+L
Sbjct: 105 TEDEEQSSLYNFLYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGCFAYSKDL 164

Query: 168 ILLLEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTER 227
           I +LEAPV  QGVRFLQL PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER
Sbjct: 165 IRILEAPVSVQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRDER 224

Query: 228 QFLAPIVLGSSILFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFS 287
           +FL PIVLGSS+LFY GI FSY VL PAALNFFV+YA+GAVESLWSIDQYFEFVLVL+FS
Sbjct: 225 KFLGPIVLGSSVLFYLGIFFSYTVLAPAALNFFVNYADGAVESLWSIDQYFEFVLVLLFS 284

Query: 288 TGLSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLL 347
           TGLSFQVPVIQ+LLGQ+GLVS DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLL
Sbjct: 285 TGLSFQVPVIQLLLGQVGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLL 344

[Close]

BLAST of CcUC05G104540 vs. ExPASy Swiss-Prot
Match: Q9SJV5 (Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATC PE=1 SV=2)

HSP 1 Score: 430.6 bits (1106), Expect = 1.6e-119
Identity = 239/345 (69.28%), Postives = 274/345 (79.42%), Query Frame = 0


Query: 3   SISGALTSHLQLSHCRFSARTSQSQLASARISPTSRRSKSRLTGLLSRRNFHRFVCSAVD 62
           S S AL  H +L+     + T Q    +     + R +  R + +  RR+      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRYS-VTQRRSKGFGPVSALN 64

Query: 63  DDVREKQMELGAGNGSTIVEDVPDIVENSTNGAPEKSDIYNFLYPSKDLLPDDKEMSVFD 122
           DD  +   E   G GS + +  PD  E+        S +Y FLYP K+ LPDDKEM++FD
Sbjct: 65  DD--DSPTETTPGVGSAVEDRPPDSSED------RSSSVYEFLYPRKEELPDDKEMTIFD 124

Query: 123 HLEELRQRIFVSVLAVGAAIVGCFAFSKELILLLEAPVKEQGVRFLQLGPGEFFFTTLKV 182
           HLEELR+RIFVSVLAVGAAI+GCFAFSK+LI+ LEAPVK QGVRFLQL PGEFFFTTLKV
Sbjct: 125 HLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKV 184

Query: 183 SGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAAL 242
           SGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIV GSS+LFYAG+AFSY VLTPAAL
Sbjct: 185 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAAL 244

Query: 243 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR 302
           NFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIWR
Sbjct: 245 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWR 304

Query: 303 YVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           YVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 YVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

[Close]

BLAST of CcUC05G104540 vs. ExPASy Swiss-Prot
Match: P54086 (Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=tatC PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 7.7e-77
Identity = 148/238 (62.18%), Postives = 186/238 (78.15%), Query Frame = 0


Query: 110 DLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILLLEAPVKEQGVRFLQ 169
           D +PDD EMS+FDHL+ELR RIF+S+ AV   +V CF F K L+  L+ P     V+FLQ
Sbjct: 19  DEVPDDVEMSLFDHLDELRTRIFLSLGAVLVGVVACFIFVKPLVQWLQVPAGT--VKFLQ 78

Query: 170 LGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAG 229
           L PGEFFF ++KV+GY G+L+ SP ILY+II FVLPGLTR ER+ L P+VLGSS+LF+AG
Sbjct: 79  LSPGEFFFVSVKVAGYSGILVMSPFILYQIIQFVLPGLTRRERRLLGPVVLGSSVLFFAG 138

Query: 230 IAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQL 289
           + F+Y  L PAAL FFVSY    VE LWSID+YFEFVL+LMFSTGL+FQ+P+IQ++LG L
Sbjct: 139 LGFAYYALIPAALKFFVSYGADVVEQLWSIDKYFEFVLLLMFSTGLAFQIPIIQVVLGFL 198

Query: 290 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           G+VS +QML  WR+V++GA+V  A+LTPSTDPLTQ LLA  +LGLY GG   V+L G+
Sbjct: 199 GIVSSEQMLKGWRFVILGAMVLGAILTPSTDPLTQSLLAGAVLGLYFGGIGCVRLLGK 254

[Close]

BLAST of CcUC05G104540 vs. ExPASy TrEMBL
Match: A0A5A7SVD3 (Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001410 PE=3 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 5.2e-177
Identity = 329/347 (94.81%), Postives = 339/347 (97.69%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARISPTSRRSKSRLTGLLSRRNFHRFVCSA 60
           MGSISG+L+SHLQLSHCRFSARTSQSQL S RISPT RR+K RLTG LSRRNF+RFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQMELGAGNGSTIVEDVPDIVENSTNGAPEKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQ ELG GNGST+VEDVPDI +NSTNGAP+KSDIYNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+LILLLEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of CcUC05G104540 vs. ExPASy TrEMBL
Match: A0A1S3BG97 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489323 PE=3 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 5.2e-177
Identity = 329/347 (94.81%), Postives = 339/347 (97.69%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARISPTSRRSKSRLTGLLSRRNFHRFVCSA 60
           MGSISG+L+SHLQLSHCRFSARTSQSQL S RISPT RR+K RLTG LSRRNF+RFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQMELGAGNGSTIVEDVPDIVENSTNGAPEKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQ ELG GNGST+VEDVPDI +NSTNGAP+KSDIYNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+LILLLEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of CcUC05G104540 vs. ExPASy TrEMBL
Match: A0A0A0KTA2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611060 PE=3 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 1.7e-175
Identity = 328/347 (94.52%), Postives = 337/347 (97.12%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARISPTSRRSKSRLTGLLSRRNFHRFVCSA 60
           MGSISGAL+SHLQLS CRFSARTSQSQL S RISPT RR+K R TGLL RRNF+RFVCSA
Sbjct: 1   MGSISGALSSHLQLSDCRFSARTSQSQLTSVRISPTLRRTKLRFTGLLRRRNFNRFVCSA 60

Query: 61  VDDDVREKQMELGAGNGSTIVEDVPDIVENSTNGAPEKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQ ELG GNGST+VEDVPDI +NSTNGAP+KSDIYNFLYPSKDLLPDD+EMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDREMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAIVGCFAFSK+LILLLEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSY+VLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYVVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of CcUC05G104540 vs. ExPASy TrEMBL
Match: A0A6J1GYD1 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458314 PE=3 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 1.1e-174
Identity = 325/347 (93.66%), Postives = 336/347 (96.83%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARISPTSRRSKSRLTGLLSRRNFHRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTS SQLASARI PTSRRSK R + LLSRRNF+RFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQMELGAGNGSTIVEDVPDIVENSTNGAPEKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQ +LG GN ST+VEDVPDI E+STNGAPEKSD+YNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKEL+L+LEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of CcUC05G104540 vs. ExPASy TrEMBL
Match: A0A6J1J324 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481370 PE=3 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 3.2e-174
Identity = 325/347 (93.66%), Postives = 336/347 (96.83%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARISPTSRRSKSRLTGLLSRRNFHRFVCSA 60
           MGSISGALTSHLQLSHCRFSA TS SQLASARISPTSRRSK R + LLSRRNF+RFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSAITSHSQLASARISPTSRRSKLRFSNLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQMELGAGNGSTIVEDVPDIVENSTNGAPEKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQ +LG GN ST+VEDVPDI E+STNGAPEKSD+YNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKEL+L+LEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of CcUC05G104540 vs. TAIR 10
Match: AT2G01110.1 (Sec-independent periplasmic protein translocase )

HSP 1 Score: 430.6 bits (1106), Expect = 1.2e-120
Identity = 239/345 (69.28%), Postives = 274/345 (79.42%), Query Frame = 0


Query: 3   SISGALTSHLQLSHCRFSARTSQSQLASARISPTSRRSKSRLTGLLSRRNFHRFVCSAVD 62
           S S AL  H +L+     + T Q    +     + R +  R + +  RR+      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRYS-VTQRRSKGFGPVSALN 64

Query: 63  DDVREKQMELGAGNGSTIVEDVPDIVENSTNGAPEKSDIYNFLYPSKDLLPDDKEMSVFD 122
           DD  +   E   G GS + +  PD  E+        S +Y FLYP K+ LPDDKEM++FD
Sbjct: 65  DD--DSPTETTPGVGSAVEDRPPDSSED------RSSSVYEFLYPRKEELPDDKEMTIFD 124

Query: 123 HLEELRQRIFVSVLAVGAAIVGCFAFSKELILLLEAPVKEQGVRFLQLGPGEFFFTTLKV 182
           HLEELR+RIFVSVLAVGAAI+GCFAFSK+LI+ LEAPVK QGVRFLQL PGEFFFTTLKV
Sbjct: 125 HLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKV 184

Query: 183 SGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAAL 242
           SGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIV GSS+LFYAG+AFSY VLTPAAL
Sbjct: 185 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAAL 244

Query: 243 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR 302
           NFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIWR
Sbjct: 245 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWR 304

Query: 303 YVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           YVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 YVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

The following BLAST results are available for this feature:

BLAST of CcUC05G104540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446660.1	1.1e-176	94.81	PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucu...	[more]
XP_004135073.1	3.5e-175	94.52	sec-independent protein translocase protein TATC, chloroplastic [Cucumis sativus...	[more]
XP_038892645.1	4.5e-175	94.81	sec-independent protein translocase protein TATC, chloroplastic [Benincasa hispi...	[more]
XP_022956650.1	2.2e-174	93.66	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita mosch...	[more]
KAG6601263.1	2.2e-174	93.66	Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurb...	[more]

BLAST of CcUC05G104540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94G17	3.4e-125	73.89	Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum...	[more]
C4IZX0	1.3e-121	76.05	Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays OX=4...	[more]
Q9AVE6	5.6e-120	74.60	Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa ...	[more]
Q9SJV5	1.6e-119	69.28	Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis t...	[more]
P54086	7.7e-77	62.18	Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PC...	[more]

BLAST of CcUC05G104540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVD3	5.2e-177	94.81	Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BG97	5.2e-177	94.81	sec-independent protein translocase protein TATC, chloroplastic OS=Cucumis melo ...	[more]
A0A0A0KTA2	1.7e-175	94.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611060 PE=3 SV=1	[more]
A0A6J1GYD1	1.1e-174	93.66	sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita mos...	[more]
A0A6J1J324	3.2e-174	93.66	sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita max...	[more]

BLAST of CcUC05G104540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01110.1	1.2e-120	69.28	Sec-independent periplasmic protein translocase	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002033	Sec-independent periplasmic protein translocase TatC	PRINTS	PR01840	TATCFAMILY	coord: 193..211 score: 54.82 coord: 211..237 score: 41.86 coord: 119..146 score: 38.81 coord: 262..290 score: 45.61
IPR002033	Sec-independent periplasmic protein translocase TatC	PFAM	PF00902	TatC	coord: 122..330 e-value: 5.5E-61 score: 206.0
IPR002033	Sec-independent periplasmic protein translocase TatC	TIGRFAM	TIGR00945	TIGR00945	coord: 121..335 e-value: 7.8E-80 score: 265.8
IPR002033	Sec-independent periplasmic protein translocase TatC	PANTHER	PTHR30371	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC	coord: 48..347
IPR002033	Sec-independent periplasmic protein translocase TatC	HAMAP	MF_00902	TatC	coord: 115..347 score: 16.566843
None	No IPR available	PANTHER	PTHR30371:SF6	SEC-INDEPENDENT PERIPLASMIC PROTEIN TRANSLOCASE TATC-RELATED	coord: 48..347
IPR019820	Sec-independent periplasmic protein translocase, conserved site	PROSITE	PS01218	TATC	coord: 262..281

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G104540.1	CcUC05G104540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0065002	intracellular protein transmembrane transport
biological_process	GO:0043953	protein transport by the Tat complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033281	TAT protein transport complex
molecular_function	GO:0009977	proton motive force dependent protein transmembrane transporter activity