CcUC05G103890 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G103890
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	RAB6-interacting golgin
Location	CicolChr05: 31647706 .. 31649848 (-)
RNA-Seq Expression	CcUC05G103890
Synteny	CcUC05G103890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTGTAGTCACAGAGCGAGGGAATTGGAAAGAGAGTTTTAAAGCAAAAGCAAAAGGTGAAAAGCTCCGGCCATCTAAAAGCACACAACCAGACCGATCAATATCACTAAAGCAAACATGTACATTGCATAAAGAAGACATAGGCTTGCTTTCCGAAGCGCTGTAGAAAAGAAAGGGTGTTGATTAGGAGACAAGGATTATTAGAAAAAAACGAAAAAATTATGACGAGTAAGAATGGAGGTGAAGGAAATGGCGAGAGAGTCCTAACAGAAGGAAGTAATGATCGGAGCGAAGACAAGATGTCTAAACTGACCATATCTACGTTGCAAGCTAGGGAAGAAGAGATTGAGAGGAAGAAGATGGAAGTAAAAGAGAAGGTAGAATTTCAGTTAACCCGTGCAGAGGAAGAAGCCAAACGCTTGGCACAAATTTGGGAAGTAAGTTTTATAATTACTCTTTCAAGTAACACGTAAAAAGGGTCCAAATTTAGGCCCCTTTGGTCGCAAAATTATAATATAAATTCTTATATTGACTTTAGTTAATTTATTTCTGAAGAAACAAAAGAATTAATCATACGTATGAATATATGACAAGAGGATTGTGATTTTTTTTAAAATAAGGTTCGAAATTTCTAGGCTGAACAAAAATTTTGTTCCTGGGTACAAAACTGTAATAGCGAATTTTTGGTGCGGTGGGATGGAAGCACATAGTACCCTGAATTTATGCCAGACCTCAATTTCGCAATTACCCTCTAAGTTTTGTCTCCCTTTACTCAATTATTTATAGAACTTCAATAATCTTCATTTGGAATTCAATTTACATCCAGTAGAAATGGATAGAACTAACTTTTTAATAAGAGGATCAAAGAAATTGCAGAGAAACGCCAATAACAATCAACAAAACAATGGGAAAATGGTGGAAAACCATTAGTTTACGAGTAGCAATTAATTAATTAAAGGTTAAACATTTTGATTCAGGTACTTTAGACTTCATCCCATATTTCTCCCTGTAGTTCATGTACTCTAAATAAACCTTGAAGTTAATTTTGATCAAATTTGCTAAAACAATAACAATAGTTTTCATTCAACAAGAGTCAATGTAAATATCTTTCCAAAATTTATATAAGACAAAACAGACTAAATTTTCTTTAAAAATGTTAACCATAGACTAATTTTAAGATTTATTAAAAGTACATAAACTAAAGTTGAATATTTGAACACAAGTTCATGAAACACTCTTCAAAATACAAGAATTGGCAAGTCAGTCTTAATTAAAAAGAAACAAAATAGAATCGAATTGAATTTCAAGTTCTCGGCTACCAAATAAATGCTCCAATGTAATTAAAGTAGGAAGCAATAAGCATTTTCTTAATAATTAAAGAAATATATTACTATAACAATGTTGTGGATGATGAAGGAGCTGGAGGTAATGGGAGATCCAATGGGGAAGGAAGTTGGTATTGTGCGAAAAAGAATTGACACAGTCAAGAGAGAACTGAAATCTCTGGGACAGATCTGCCAAAAGAAGGTGCTTCCTCAATAACAAGAATTCTTTTAGACTCATCTTTTTAAGATTTCCTCTTCATTTGTATAATTGTTTTAAAGCTTGATTTTGATTCTAACCACTAATTTTATAACGAAAGTTTCAGTTAGAAATGGAAGATATAAGTTGAAAATCATTTTCTCTGAATAAATGGTAACAGGAAAAGGAATATAAGGAAGTCCAGGAAGTATTCAACGAAAAAAGCAACGAGAAAGCTCAGCTGCTGGCTACACTAATGGAGGTATATAATTCTCGACATAATCTGTAAATGTTCCAGCATTTTCTTGGCAACCAAAAATATTTTCTTAAGTTATCCATTTGTACATGGTCATAATCTTATCAGCTGTTGGGCCAGAGTGAGAAATGGAGAATGAAAAAGCTCGAGGAGTTGAATAAGAATATAGAATCAACGAACTGAATGATGAGTGCATTAAACGAAATGATATGCACCTTTTCTTGTTAAGTTTGTATTTCTAAAGTGTTTAAAAATAAACATTGAGGCCATATTCCCCATGCAGGACTAGCAAAAAGAGTTGCTCTGATCAACATCATAATTAGTATCAACAATATTGTTAATCTTGTTATCATATATAGTGTCTGAC

mRNA sequence

CCTGTAGTCACAGAGCGAGGGAATTGGAAAGAGAGTTTTAAAGCAAAAGCAAAAGGTGAAAAGCTCCGGCCATCTAAAAGCACACAACCAGACCGATCAATATCACTAAAGCAAACATGTACATTGCATAAAGAAGACATAGGCTTGCTTTCCGAAGCGCTGTAGAAAAGAAAGGGTGTTGATTAGGAGACAAGGATTATTAGAAAAAAACGAAAAAATTATGACGAGTAAGAATGGAGGTGAAGGAAATGGCGAGAGAGTCCTAACAGAAGGAAGTAATGATCGGAGCGAAGACAAGATGTCTAAACTGACCATATCTACGTTGCAAGCTAGGGAAGAAGAGATTGAGAGGAAGAAGATGGAAGTAAAAGAGAAGGTAGAATTTCAGTTAACCCGTGCAGAGGAAGAAGCCAAACGCTTGGCACAAATTTGGGAAGAGCTGGAGGTAATGGGAGATCCAATGGGGAAGGAAGTTGGTATTGTGCGAAAAAGAATTGACACAGTCAAGAGAGAACTGAAATCTCTGGGACAGATCTGCCAAAAGAAGGAAAAGGAATATAAGGAAGTCCAGGAAGTATTCAACGAAAAAAGCAACGAGAAAGCTCAGCTGCTGGCTACACTAATGGAGCTGTTGGGCCAGAGTGAGAAATGGAGAATGAAAAAGCTCGAGGAGTTGAATAAGAATATAGAATCAACGAACTGAATGATGAGTGCATTAAACGAAATGATATGCACCTTTTCTTGTTAAGTTTGTATTTCTAAAGTGTTTAAAAATAAACATTGAGGCCATATTCCCCATGCAGGACTAGCAAAAAGAGTTGCTCTGATCAACATCATAATTAGTATCAACAATATTGTTAATCTTGTTATCATATATAGTGTCTGAC

Coding sequence (CDS)

ATGACGAGTAAGAATGGAGGTGAAGGAAATGGCGAGAGAGTCCTAACAGAAGGAAGTAATGATCGGAGCGAAGACAAGATGTCTAAACTGACCATATCTACGTTGCAAGCTAGGGAAGAAGAGATTGAGAGGAAGAAGATGGAAGTAAAAGAGAAGGTAGAATTTCAGTTAACCCGTGCAGAGGAAGAAGCCAAACGCTTGGCACAAATTTGGGAAGAGCTGGAGGTAATGGGAGATCCAATGGGGAAGGAAGTTGGTATTGTGCGAAAAAGAATTGACACAGTCAAGAGAGAACTGAAATCTCTGGGACAGATCTGCCAAAAGAAGGAAAAGGAATATAAGGAAGTCCAGGAAGTATTCAACGAAAAAAGCAACGAGAAAGCTCAGCTGCTGGCTACACTAATGGAGCTGTTGGGCCAGAGTGAGAAATGGAGAATGAAAAAGCTCGAGGAGTTGAATAAGAATATAGAATCAACGAACTGA

Protein sequence

MTSKNGGEGNGERVLTEGSNDRSEDKMSKLTISTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGIVRKRIDTVKRELKSLGQICQKKEKEYKEVQEVFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

Homology

[Close]

BLAST of CcUC05G103890 vs. NCBI nr
Match: XP_008446775.1 (PREDICTED: uncharacterized protein LOC103489402 [Cucumis melo])

HSP 1 Score: 272.3 bits (695), Expect = 2.6e-69
Identity = 150/161 (93.17%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 1   MTSKNGGEGNGERVLTEGSNDRSEDK-MSKLTISTLQAREEEIERKKMEVKEKVEFQLTR 60
           MTSKNGG GNG+RVL EGSNDR+ED+ +SKLT+STLQAREEEIERKKMEVKEKVEFQLTR
Sbjct: 1   MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTR 60

Query: 61  AEEEAKRLAQIWEELEVMGDPMGKEVGIVRKRIDTVKRELKSLGQICQKKEKEYKEVQEV 120
           AEEEAKRLAQIWEELEVMGDPMGKEVG VRKRIDTVKRELKSLGQICQKKEKEYKEVQ++
Sbjct: 61  AEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDI 120

Query: 121 FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN 161
           FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
Sbjct: 121 FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN 161

[Close]

BLAST of CcUC05G103890 vs. NCBI nr
Match: XP_004150485.1 (uncharacterized protein LOC101217540 [Cucumis sativus] >KGN52204.1 hypothetical protein Csa_008287 [Cucumis sativus])

HSP 1 Score: 264.6 bits (675), Expect = 5.5e-67
Identity = 147/161 (91.30%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MTSKNGGEGNGERVLTEGSNDRSEDK-MSKLTISTLQAREEEIERKKMEVKEKVEFQLTR 60
           MTSKNGG GN +RVL EGSNDR+ED+ +SKLT+STLQAREEEIERKKMEVKEKVE QLTR
Sbjct: 1   MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTR 60

Query: 61  AEEEAKRLAQIWEELEVMGDPMGKEVGIVRKRIDTVKRELKSLGQICQKKEKEYKEVQEV 120
           AEEEAKRLAQIWEELEVMGDPMGKEVG VRKRIDTVKRELKSLGQICQKKEKEYKEVQ++
Sbjct: 61  AEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDI 120

Query: 121 FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN 161
           FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES N
Sbjct: 121 FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESMN 161

[Close]

BLAST of CcUC05G103890 vs. NCBI nr
Match: KAA0034665.1 (uncharacterized protein E6C27_scaffold65G006840 [Cucumis melo var. makuwa] >TYK09216.1 uncharacterized protein E5676_scaffold475G002090 [Cucumis melo var. makuwa])

HSP 1 Score: 259.2 bits (661), Expect = 2.3e-65
Identity = 146/161 (90.68%), Postives = 153/161 (95.03%), Query Frame = 0


Query: 1   MTSKNGGEGNGERVLTEGSNDRSEDK-MSKLTISTLQAREEEIERKKMEVKEKVEFQLTR 60
           MTSKNGG GNG+RVL EGSNDR+ED+ +SKLT+STLQAREEEIERKKMEVKEKVEFQLTR
Sbjct: 1   MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTR 60

Query: 61  AEEEAKRLAQIWEELEVMGDPMGKEVGIVRKRIDTVKRELKSLGQICQKKEKEYKEVQEV 120
           AEEEAKRLAQIWEELEVMGDPMGKEVG VRKRIDTVKRELKSLGQICQKKEKEYKEVQ++
Sbjct: 61  AEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDI 120

Query: 121 FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN 161
           FNEKSNEKAQLLATLME    SEKWRMKKLEELNKNIESTN
Sbjct: 121 FNEKSNEKAQLLATLME----SEKWRMKKLEELNKNIESTN 157

[Close]

BLAST of CcUC05G103890 vs. NCBI nr
Match: XP_038892385.1 (uncharacterized protein LOC120081508 [Benincasa hispida])

HSP 1 Score: 242.7 bits (618), Expect = 2.2e-60
Identity = 140/161 (86.96%), Postives = 145/161 (90.06%), Query Frame = 0


Query: 1   MTSKNGGEGNGERVLTEGSNDRSEDK-MSKLTISTLQAREEEIERKKMEVKEKVEFQLTR 60
           MTSKNG           G NDR+ED+ MSKLTISTLQAREEEIE+KKMEVKEKVEFQLTR
Sbjct: 1   MTSKNG----------SGGNDRNEDEMMSKLTISTLQAREEEIEKKKMEVKEKVEFQLTR 60

Query: 61  AEEEAKRLAQIWEELEVMGDPMGKEVGIVRKRIDTVKRELKSLGQICQKKEKEYKEVQEV 120
           AEEEAKRLAQIWEELEVMGDPM KEVG VRKRIDTVKRELKSLGQICQKKEKE KEVQ++
Sbjct: 61  AEEEAKRLAQIWEELEVMGDPMEKEVGNVRKRIDTVKRELKSLGQICQKKEKECKEVQDI 120

Query: 121 FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN 161
           FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
Sbjct: 121 FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN 151

[Close]

BLAST of CcUC05G103890 vs. NCBI nr
Match: XP_022968566.1 (uncharacterized protein LOC111467754 isoform X1 [Cucurbita maxima])

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58
Identity = 133/162 (82.10%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MTSKNGGEGNGERVLTEGSNDRSED-KMSK-LTISTLQAREEEIERKKMEVKEKVEFQLT 60
           MTSK+G EGNGER+++EGS  R ED +M K LT+STLQAREEEIER+KMEVKEKVE QL+
Sbjct: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGIVRKRIDTVKRELKSLGQICQKKEKEYKEVQE 120
           RAEEEAKRLAQIWEELEVMGDPMGKEVG VRKRIDT K+ELKSLGQICQKKEKEYKEV E
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 VFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN 161
           +FNEK+NEKAQLL TLMELL QSE+WRM KLEELNK+I  TN
Sbjct: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELNKHIALTN 162

[Close]

BLAST of CcUC05G103890 vs. ExPASy Swiss-Prot
Match: B1H222 (RAB6-interacting golgin OS=Rattus norvegicus OX=10116 GN=Gorab PE=2 SV=2)

HSP 1 Score: 45.1 bits (105), Expect = 8.9e-04
Identity = 34/119 (28.57%), Postives = 62/119 (52.10%), Query Frame = 0


Query: 39  EEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGIVRKRIDTVKRE 98
           EE+ +RKK  + + +  +  R + E  +L +I +EL+ + D +  ++GI+R RID    E
Sbjct: 157 EEKNKRKKALLAQAIAERSRRTQAETMKLKRIQKELQALDDMVSADIGILRNRIDQASLE 216

Query: 99  LKSLGQICQKKEKEYKEVQEVFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIE 158
                +   + E EY   +     K+  K QL   L  ++ Q+E  + +KLEEL + ++
Sbjct: 217 YSYARKRFDRAEAEYVTAKLDLQRKTETKEQLTEHLCTIIQQNELRKAQKLEELMRQLD 275

[Close]

BLAST of CcUC05G103890 vs. ExPASy TrEMBL
Match: A0A1S3BFW5 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103489402 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-69
Identity = 150/161 (93.17%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 1   MTSKNGGEGNGERVLTEGSNDRSEDK-MSKLTISTLQAREEEIERKKMEVKEKVEFQLTR 60
           MTSKNGG GNG+RVL EGSNDR+ED+ +SKLT+STLQAREEEIERKKMEVKEKVEFQLTR
Sbjct: 1   MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTR 60

Query: 61  AEEEAKRLAQIWEELEVMGDPMGKEVGIVRKRIDTVKRELKSLGQICQKKEKEYKEVQEV 120
           AEEEAKRLAQIWEELEVMGDPMGKEVG VRKRIDTVKRELKSLGQICQKKEKEYKEVQ++
Sbjct: 61  AEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDI 120

Query: 121 FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN 161
           FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
Sbjct: 121 FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN 161

[Close]

BLAST of CcUC05G103890 vs. ExPASy TrEMBL
Match: A0A0A0KTG1 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_5G615265 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.6e-67
Identity = 147/161 (91.30%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MTSKNGGEGNGERVLTEGSNDRSEDK-MSKLTISTLQAREEEIERKKMEVKEKVEFQLTR 60
           MTSKNGG GN +RVL EGSNDR+ED+ +SKLT+STLQAREEEIERKKMEVKEKVE QLTR
Sbjct: 1   MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTR 60

Query: 61  AEEEAKRLAQIWEELEVMGDPMGKEVGIVRKRIDTVKRELKSLGQICQKKEKEYKEVQEV 120
           AEEEAKRLAQIWEELEVMGDPMGKEVG VRKRIDTVKRELKSLGQICQKKEKEYKEVQ++
Sbjct: 61  AEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDI 120

Query: 121 FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN 161
           FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES N
Sbjct: 121 FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESMN 161

[Close]

BLAST of CcUC05G103890 vs. ExPASy TrEMBL
Match: A0A5D3CFS0 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002090 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.1e-65
Identity = 146/161 (90.68%), Postives = 153/161 (95.03%), Query Frame = 0


Query: 1   MTSKNGGEGNGERVLTEGSNDRSEDK-MSKLTISTLQAREEEIERKKMEVKEKVEFQLTR 60
           MTSKNGG GNG+RVL EGSNDR+ED+ +SKLT+STLQAREEEIERKKMEVKEKVEFQLTR
Sbjct: 1   MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTR 60

Query: 61  AEEEAKRLAQIWEELEVMGDPMGKEVGIVRKRIDTVKRELKSLGQICQKKEKEYKEVQEV 120
           AEEEAKRLAQIWEELEVMGDPMGKEVG VRKRIDTVKRELKSLGQICQKKEKEYKEVQ++
Sbjct: 61  AEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDI 120

Query: 121 FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN 161
           FNEKSNEKAQLLATLME    SEKWRMKKLEELNKNIESTN
Sbjct: 121 FNEKSNEKAQLLATLME----SEKWRMKKLEELNKNIESTN 157

[Close]

BLAST of CcUC05G103890 vs. ExPASy TrEMBL
Match: A0A6J1HV92 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111467754 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.7e-59
Identity = 133/162 (82.10%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MTSKNGGEGNGERVLTEGSNDRSED-KMSK-LTISTLQAREEEIERKKMEVKEKVEFQLT 60
           MTSK+G EGNGER+++EGS  R ED +M K LT+STLQAREEEIER+KMEVKEKVE QL+
Sbjct: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGIVRKRIDTVKRELKSLGQICQKKEKEYKEVQE 120
           RAEEEAKRLAQIWEELEVMGDPMGKEVG VRKRIDT K+ELKSLGQICQKKEKEYKEV E
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 VFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN 161
           +FNEK+NEKAQLL TLMELL QSE+WRM KLEELNK+I  TN
Sbjct: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELNKHIALTN 162

[Close]

BLAST of CcUC05G103890 vs. ExPASy TrEMBL
Match: A0A6J1D8N9 (RAB6-interacting golgin OS=Momordica charantia OX=3673 GN=LOC111018644 PE=3 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.7e-58
Identity = 132/161 (81.99%), Postives = 146/161 (90.68%), Query Frame = 0


Query: 1   MTSKNGGEGNGERVLTEGSNDRSEDKM-SKLTISTLQAREEEIERKKMEVKEKVEFQLTR 60
           MTS +GG  NGER   EGS+D+ ED+M SKLT+STLQAREEEI+RKKMEV+EKVE QL+R
Sbjct: 1   MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSR 60

Query: 61  AEEEAKRLAQIWEELEVMGDPMGKEVGIVRKRIDTVKRELKSLGQICQKKEKEYKEVQEV 120
           AEEEAKRLAQIWEEL+VM DPM KEVG VRKRIDTVKRELKSLGQICQKKEKEYKE  E+
Sbjct: 61  AEEEAKRLAQIWEELKVMVDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETLEI 120

Query: 121 FNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN 161
           FNEKSNEKAQLLA LMELLGQSE+WRM+KLEEL+KNIEST+
Sbjct: 121 FNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH 161

[Close]

BLAST of CcUC05G103890 vs. TAIR 10
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-37
Identity = 84/137 (61.31%), Postives = 109/137 (79.56%), Query Frame = 0


Query: 22  RSEDKMSKLTISTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPM 81
           + +++MS+  +S  +A+EEEIE+KKME++E+V+ QL R EEE KRLA I EELE + DPM
Sbjct: 40  KEDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALIREELEGLADPM 99

Query: 82  GKEVGIVRKRIDTVKRELKSLGQICQKKEKEYKEVQEVFNEKSNEKAQLLATLMELLGQS 141
            KEV +VRK+ID+V +ELK LG   QKKE+EYKE  E FNEK+ EK QL+  LMEL+G+S
Sbjct: 100 RKEVAMVRKKIDSVNKELKPLGHTVQKKEREYKEALEAFNEKNREKVQLITRLMELVGES 159

Query: 142 EKWRMKKLEELNKNIES 159
           EK RMKKLEEL+KNI+S
Sbjct: 160 EKMRMKKLEELSKNIDS 176

[Close]

BLAST of CcUC05G103890 vs. TAIR 10
Match: AT3G52900.1 (Family of unknown function (DUF662) )

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-35
Identity = 90/160 (56.25%), Postives = 114/160 (71.25%), Query Frame = 0


Query: 1   MTSK-NGGEGNGERVLTEGS---NDRSEDKMSKLTISTLQAREEEIERKKMEVKEKVEFQ 60
           M+SK N G      V T G     D  E+++ K+ ++  QAREEEIERKKM VKEKV+ +
Sbjct: 1   MSSKNNSGAAAVSGVNTNGKLPMEDNEEEEIWKVAVTRFQAREEEIERKKMTVKEKVQQR 60

Query: 61  LTRAEEEAKRLAQIWEELEVMGDPMGKEVGIVRKRIDTVKRELKSLGQICQKKEKEYKEV 120
           L  AEE  + L Q  EELE+MGDPM KEVG+VRK+ID   R++KSL Q CQKKEKEYK+ 
Sbjct: 61  LGFAEEATRCLTQTLEELEIMGDPMRKEVGMVRKKIDMANRDIKSLAQSCQKKEKEYKDT 120

Query: 121 QEVFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNI 157
            E FNEK+ EKA L++ LMELL +SE+ R+KKLEE+NK +
Sbjct: 121 LEAFNEKNKEKAHLVSMLMELLAESERLRIKKLEEINKTV 160

[Close]

BLAST of CcUC05G103890 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) )

HSP 1 Score: 142.1 bits (357), Expect = 3.8e-34
Identity = 82/155 (52.90%), Postives = 114/155 (73.55%), Query Frame = 0


Query: 10  NGERVLTEGS------NDRSEDKMSKLTISTLQAREEEIERKKMEVKEKVEFQLTRAEEE 69
           + E VL  GS        R +++M++  +S  +A+E+EIE+++MEV+E+++ QL R E+E
Sbjct: 37  SNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQE 96

Query: 70  AKRLAQIWEELEVMGDPMGKEVGIVRKRIDTVKRELKSLGQICQKKEKEYKEVQEVFNEK 129
            KRL+ I EELE M DPM KEV +VRK+ID+V +ELK LG   QKKE+EYKE  + FNEK
Sbjct: 97  TKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEK 156

Query: 130 SNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES 159
           + EK QL+  LMEL+G+SEK RM KLEEL+K+IE+
Sbjct: 157 NREKVQLITKLMELVGESEKLRMIKLEELSKSIET 191

[Close]

BLAST of CcUC05G103890 vs. TAIR 10
Match: AT3G52920.2 (Family of unknown function (DUF662) )

HSP 1 Score: 142.1 bits (357), Expect = 3.8e-34
Identity = 76/137 (55.47%), Postives = 108/137 (78.83%), Query Frame = 0


Query: 22  RSEDKMSKLTISTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPM 81
           + +++M++  +S  +A+E+EIE++KMEV+E+V+ QL R EEE +RLA I EELE M DPM
Sbjct: 26  KEDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGRVEEETRRLASIREELETMADPM 85

Query: 82  GKEVGIVRKRIDTVKRELKSLGQICQKKEKEYKEVQEVFNEKSNEKAQLLATLMELLGQS 141
            KEV  VRK+ID+V +ELK LG   QKKE+EYKE  + FNEK+ EK QL+  LMEL+G+S
Sbjct: 86  RKEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMELVGES 145

Query: 142 EKWRMKKLEELNKNIES 159
           EK R+KKL+EL+++I++
Sbjct: 146 EKLRLKKLDELSRSIDT 162

[Close]

BLAST of CcUC05G103890 vs. TAIR 10
Match: AT5G03660.1 (Family of unknown function (DUF662) )

HSP 1 Score: 141.0 bits (354), Expect = 8.5e-34
Identity = 78/138 (56.52%), Postives = 105/138 (76.09%), Query Frame = 0


Query: 22  RSEDKMSKLTISTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPM 81
           + +D++S   +S  +A+EEEIE+KKME++E+V+ QL R E+E+KRLA I EELE   DPM
Sbjct: 34  KEDDELSMKALSAFKAKEEEIEKKKMEIRERVQAQLGRVEDESKRLAMIREELEGFADPM 93

Query: 82  GKEVGIVRKRIDTVKRELKSLGQICQKKEKEYKEVQEVFNEKSNEKAQLLATLMELLGQS 141
            KEV +VRK+ID++ +ELK LG   QKKE EYK+  E FNEK+ EK +L+  L EL G+S
Sbjct: 94  RKEVTMVRKKIDSLDKELKPLGNTVQKKETEYKDALEAFNEKNKEKVELITKLQELEGES 153

Query: 142 EKWRMKKLEELNKNIEST 160
           EK+R KKLEEL+KNI+ T
Sbjct: 154 EKFRFKKLEELSKNIDLT 171

The following BLAST results are available for this feature:

BLAST of CcUC05G103890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446775.1	2.6e-69	93.17	PREDICTED: uncharacterized protein LOC103489402 [Cucumis melo]	[more]
XP_004150485.1	5.5e-67	91.30	uncharacterized protein LOC101217540 [Cucumis sativus] >KGN52204.1 hypothetical ...	[more]
KAA0034665.1	2.3e-65	90.68	uncharacterized protein E6C27_scaffold65G006840 [Cucumis melo var. makuwa] >TYK0...	[more]
XP_038892385.1	2.2e-60	86.96	uncharacterized protein LOC120081508 [Benincasa hispida]	[more]
XP_022968566.1	1.6e-58	82.10	uncharacterized protein LOC111467754 isoform X1 [Cucurbita maxima]	[more]

BLAST of CcUC05G103890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B1H222	8.9e-04	28.57	RAB6-interacting golgin OS=Rattus norvegicus OX=10116 GN=Gorab PE=2 SV=2	[more]

BLAST of CcUC05G103890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BFW5	1.3e-69	93.17	RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103489402 PE=3 SV=1	[more]
A0A0A0KTG1	2.6e-67	91.30	RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_5G615265 PE=3 SV=1	[more]
A0A5D3CFS0	1.1e-65	90.68	RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1HV92	7.7e-59	82.10	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111467754 PE=3 SV=1	[more]
A0A6J1D8N9	1.7e-58	81.99	RAB6-interacting golgin OS=Momordica charantia OX=3673 GN=LOC111018644 PE=3 SV=1	[more]

BLAST of CcUC05G103890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09980.1	1.3e-37	61.31	Family of unknown function (DUF662)	[more]
AT3G52900.1	1.5e-35	56.25	Family of unknown function (DUF662)	[more]
AT2G36410.2	3.8e-34	52.90	Family of unknown function (DUF662)	[more]
AT3G52920.2	3.8e-34	55.47	Family of unknown function (DUF662)	[more]
AT5G03660.1	8.5e-34	56.52	Family of unknown function (DUF662)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 32..77
None	No IPR available	COILS	Coil	Coil	coord: 92..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	PANTHER	PTHR21470:SF3	RAB6-INTERACTING GOLGIN (DUF662)	coord: 13..159
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 18..158 e-value: 8.2E-63 score: 210.9
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	RAB6-INTERACTING PROTEIN GORAB	coord: 13..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G103890.1	CcUC05G103890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus