CcUC05G102160 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G102160
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	protein ROOT INITIATION DEFECTIVE 3
Location	CicolChr05: 30181923 .. 30188877 (-)
RNA-Seq Expression	CcUC05G102160
Synteny	CcUC05G102160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGACTTCATTGTAGGTTTTTGTTTGCTACCCAAACCAGCCGTATTCAACCCATTCTCCCATCGGGTATGATTTTTCCAACCTCTAAAGTAAAAAGAAAATATTAAATTTTTTTTTTTTTTTTTTTTTTTTAAAATAATTTTCTTTTAGTAAAGAGAAATGCATGTCCACTTTGTCTGAATCGACTTTATTGACATTTTTCTCCTTTCGTTTTCTTTCCATACTTCCCTTTATACATGTAATTTCAGGTTGGATTAATATCAACTCCATGGTATCAAAGGAAGATACTGATTTTTGTTATTTTTAGCTTTTTTTTATAATTTATATTATTAAGTTAAGATTTCTTTTACTATTTAAGATCCACCCTACAATATAGCGTCAAAAAGCTATAAAGAGTAAATTCAACACTCCGGTCATACTCATAATATAAGTTACTTTTATATTTTGAAAAGGAAAAGGTTTTCCTCCGATATTCGGCAAATCCAGCCCAATATGGGCCGCATAAGTGGGAAAAAATGGGCTAGGCCCAGTCCACTAAGAACTTTTCTTCCTTCGGCTTAATTCAACATTGACGAGATTGGCCCAATTAGCCCAATTTAAAGAAGTAAGCCCTGAAGTTGGTTTGGTTGACAATTCCTCCATTCACCTCTAGTTTCCCTCCAATGTAACACACCTCACACATCAAAATGTAGTTAGTTTTAGTCGGTTGTCATTTATTTTGGACTCTATTTTGATTTAATTTAGATTAAATCAATTCGTTAATTGAAGTTAATTATTAAATGTGATTGAATTATTTAAGTTGTTGCAATCTAATTTGGATAAATTAGATTTAAAATGGATTCATTTAAGATATTAAGTTTTTTAATTTTGTGGATTAGAGATTTTAAATTCATAATTTGGAGAATTTGAATTATGCATGTTCTTTGAATTGAGATTAATTTGAAAGAACAAAACTTATCTCCTATTTGGAGATTTTGTTTTTTGAGTTACATTTATTTATTTATTCTTTTTATATTTCCGTTTTTGGAATTAAAAATTAGGTTGGAGCTTTGAAAAAAAAAAAGAATTAAATGGTCTATTAGGGCATAAGAGAAGGGAAAGAAAAACCCATCTTCTTATTCAGCCCCTTTGCCGCCGACAACCTCCCTTCGGTCTTCTTCGCCGGCGACCTCACCCCCGAGCAGCGGGGTCGACCACGGACTCCGACGACCAGTCCCCGCGCATTAGATGATTCAGACCAATGTGCTCTTGCCCCACATTTGACGGCGGAGTCAGCTTGCAACATAAACACCCAGTTTGAACAAGTTTCGAAACATCGTTTCTTCTTCGTTTCAGACTGCAACGTGAACAACAGGTTGTGCATCACGTTTTTTGACGACTGGGTGTCTTGCAGCAGCGTTTTCGGCTTGGGGTGTAAGCTTTCGGCTGTTACCCGCACTCTGTTTGGCTTCGAATTTGTGTACCCATAACGTTTAAGGTCCAAATCTGTAAGTTTGGACGTTTTCGGACACCAACCAGCAAGGATTATTTGCCTTTTCGGTAAGATTCGGTAAGGATAACTGCTTTAATTTCTTATTTTGAATTGGATTTAAGTATTCAAATGTTATTCTGAACTCTTGGAACTCCTTTGTTGTTGTGTTTGGGTAAGTTTCTAAGTATTTGATTAAGCTTCAGTAAGGTTGAACATATTTCAGACTAGTTCAGACTCGATTAAAGTGTCTTAGATCAGTCTTTGATTCGTTAAAGTTTGTTGGTCGTAGTTTTGGCTAGTTCGAAGTGACTAATTAAGGTTTATGGTGGACTTCGGATAAGAATATTACTGATGGCAAATATCTCGGTGTTGATTAACGTTTTTGAACTAAGTTCTAACACTTAAATGTTATGTTTATTGTCTAGGCTTTCTAAAGGTTGATGTTGGTTCCAGGAAGTGGATTTCCGGATTGAGAATTATAGGATTGTCGATTGAGGTAGGTAGTTTCCACGTCCCTTCCACAAATGTAAATTTTGACGAAGGTTGAAAGTTTGTTTTGGATGTTTGAAAATATGTCTTCTACCATTTGAAACCGATTGGATTTGTTTTGGATGTTTTAAACATTTTCCTATTAGGAAATTTGTTTTATGTGATTTGAGAATTGACCGGAAGTATTTTCTGTATTTTTAGTTGATTTTGTCAAATATTGTTTTGAATGATGGCTGGAACTGAAACTATTTTGAATGATGGTTGGAAGTGTTTTGATTGATTTTGAATTGAAAGTATTTATGTTTTGGTTTTGGTTATTTCTGAAAGCTTTTGAAAGGTTTGAGTGGTTTGATTTGATGAGTTCTTCTGTCGAAATTGCTATTTGAAACGACATGTTTTGTTTCAAATGTTTTTGACCAATTCATCTGGGGCTATTCGGGTATGCTAGTTTTTGTGTTTTAGGGATTCTATGGTATTTTGTTGTAGCCAATTTTGGAATTGACGGTTAAGACACATTTTTGTGGTTTGGCATTCTTTGGAATGAAGATTCATGTGTGTTACACTCACATGGCCTCATGCTTAAGTAATTTATGCTATTTGCTTGGTGGTCATTCGACATGTTTTACTGGTGATACCGATGGGTAACTATTTCTGTTGGGCTACTTCAACTATGCATGTTTCCTACTCTGTATTTGAAAGGTTTGAATTACTGAAAGCTTTATTACTTAAAGTATTGACTGATTCAAGGTTTTGTTTGATTGAATGTATTGACTGATTGAAAGCTTTGTATTTGACAATAATGAAATATTAGCATTTTTAGGAAAAAGTATGAAAGTTCTATTTATTAAAGGTTTTTAAAGTCTATTCAAATGTTTTGGTTTTCTTTTTTGAAAGACTAGTTGAAAGTTTCAGCTTCAAATGTTTAGTTTTGAAAGGTTAGCTTGAAACATTTTTATTTTGAAGGTACCGTTTTGTAGCAAAGTTTTAACTGAAAGTTTTGAGATGATTTGTATTTCTATTTTCAAATGTTTTGAAAGAAAATGAATTTTCAAAGCTGGATATGGGAACTGCTTATTGAGCATTTTTTTACTCATCTTTGCTTTTTCAAAATGCTTTTAGATGAAGGATCAGTTGATAATTCTGAACGAAGTGAGGTTTGGCATTCTGGCACGATATTTTTCTTAGGATTTGATAGTTTGACTTAGAAATTGTTTGTGATAAGTTGATTTCACTGAAATGTGTAAGTTGTAAAAGCTTTTAATTGTTATGTTTTCCGCATTCTTGTTATAATAGCTGTTTTGGAAAGTACGGGCTGTTACACACAGTCTCGCTGCCACCGACTCATTCGACACTAGACACCTTTGTCGCTGCAGCACTCACCTTAAATATTCAAAGGCAATTGAAACTCAAACCGTCTCTCAAGCTCTCAAGTCAGAATGGTGCTACTGATTGCTTCTTCATCCATTGATTCGGGGATTGGTTGCTGGGACCTTCAAACGGGTGCGGAACAACTACGTTACAAGTCTTGTGCTTCTCCAGCACATGGTCTTGTTTGTGTTGGTGAAAAGTTTCTTGCATGCTCTCAGCTCCGCGATCCCGCTGCCACAGCAGGCTCTGTTCTCTACTGGTCTTGGTGTAAGGTACAAGTTATTATAACAAACTCCATCATCTGTTCCTCAATAGTGTGCTTAATTAATTGTTCTCCCTGCAGCCTCAAGTAGAAGTTAAGAGCTTTCCGGCTGAACCATTGATGGCCTTGGCTTCCAACAATGAGGGTACTTATATCGTTGGTGGTGGTTTCTCTGGAGATATATACTTCTGGGAGGTAAAGTTTGATTCAATAATATATGCTGTGGCATTGAACTATAAAATTCCCTGCCTGTCGAAGATTATATTCATCCTCCAATTCTATTAATTGTCACAGTATTTGGTTTTGGTATAATATGGCATGCTCGTTGTTGCAGGTTTTGAGTGGTAGACTGCTTAAGAAGTGGCATGCTCATTATAGGGCGGCTACTTGCCTCGTATTCTCTGAAGATGACTCCCTGCTAATTTCTGGTTCTGAAGATGGCTGCATTAGAGTTTGGTCCCTGCTAACGTATAAAATTCCATCCTTTGGCCGTGTGTCTGTTTAGGTTTTATTGTTACTTGTAGAAATTCTTCTTACAAACATGTTTGTTCCAGGGTATTTGATGATGGATGGCATAGCGAATCAAAACATTTGTATCAACATAGTTTCACTGGGCATAATCTACCTGTTACCGATATTGCTGTTGGCTATGGAGGATCAAATGCTATTATAATCTCTTCCTCTGTGGATCGTACTTGTAAGGTTTGGCACTCTATTGAATATAACACTACTATGTTGATAATGTACTTTTGTGATGATGTGGCCATGTAGTTTGGCGAGGTAATTAGTTTTACAATTTCTTTGGCTTTAATTTATTTCTGTTTGCTAGCTATGTACCTGAATTTGGCTGTCTAATTGGATTGACTTGGTAAATCGCCCTCTCTTGCAAGTACTGCAGCTTGACATTTAAGGTTTATTTACATTTCTTCTAGGATGTTAGAGACACATACAGACATAATTATATAGACTAAGTTTGTAATTTTGAAAGTTCAAAAACCAAACAGGCACAAACTTCAAAGTTGAGGACTAAATTTGTAACGTTACCTATAGAAAGAATTGGAATGGACATTGTATGGGAGGATGAGTTGGCAACTTGGCATAAGAATATATAGTGTAGAGAGGTGGATAGAATTATCCAAATACGGTTTACATCAATATGCATGCCCTTCTATGATTTTCGTGTTTTTAATAGTGATGTGGATATGTCATATATCAAACACGTTTCTTTATGATGTATCGCCAATGAGTAATGACTACTTTCCTATCCTAACTTCTTTCATATCCAATTTTCTTCTGATGAGTCATTTGTGGTACGTTAACTTGGCTTTTGTAGGTGTGGAGCTTATCTAAGGGGAAATTATTAAGAAATATCATATTTCCTTCCATCATTGATGCAATTGCATTGGATCCTGCCGAACATGTCTTCTATGCTGGTGGTAGAGATGGGAAGATCTACACTGCTGCGCTTAATGCTAAATGCCCAGCCAGCAGTGACTACGGATTGCACATTCTCGGCTCATTATCAAATCAAAGGTCTGTATTTATTTCTTTGCAACTTTCATTAATATATCTTACAGTTAAATATCAAAGATTAAGTTTTCCTCTAAACTTGTTTGCCCTTTCGGGTTTCTAGAATCTTCTCTTTGTTCCATGCAATATATGGTAGATTGACTAATGAGATTATGCAATGAATTGTTGAGGAATTTCAAGTTGCTATTAGTTTGGTGCACGAGCTAAGGGTATTTCTAATAGTGCCTTGATTTCTTAAGAACTAGGAACTAGTATTCTACTTCCAAGTTGATAATATTTGTGTCTAGCATTGATAAAAATCCACTTTATGGTTTATTCAAAGAAACTGGACATGTTTTATTTGTATACAGGTTTTAATGCAGGAAATTATTTCTCTATGAATATGCTATATTGCCTAACTTATTGTGCTCTTGTATTTTAACTAGCAAGTCTGTTACTTCCTTGGCATTCTGCTCAAGTGGTAATTTGTTGATATCCGGATCTGAGGATGGAGCAATAAGAGTTTGGGATACAAGAACCAATAATATTATTCGTGTATTCAGACATTCAAAAGGTATTAAACCATTCAAATTTTATTACTTCGATAAGTATCTATAAAGATGCATTTTGTTTTTACTAACTGACCGGTTGACCCTGTGTTAGCATTAATTTTATTTATTGAATAAATACTTCCTATCAAGTTGCTTTTTATTCTCAATTTTAAGTTTTAACCGTAGCTAAGGCTTAGGGCACATCTTTCATTGTTTATGCCAGATTGGTTTTTCCGCTTTGTAATTCTAATCGTTAGGGATTGGAGGATGGTATATTCAAATATAAAAAAATTATGTTTTGAAGCTTGATACTCTTTTGTGTTCCTTTTTTTCATAATCTCCCAATTTTATGAACTTTCTTTATAATTTTATTTCCAAGTACATTCTTTTTAAATATGTACGTTATTCATTTATATAATTTTCTGCATATTAAGTGTCCTAGCTTGTGCTGTTAGCTTTTGCTTAATTCACGACCAGCATTTTTATTATATAATCTCAATGCAAATACATTGATGTTCTGCTCTTGTGCAGGTCCTGTAAATAATATTCTTGTTGTTCGACAACAGCTCCTTCCTAAACCACAGTCAACTTCCCAAGGTTCTATGAGAAAGCATCGGTCACTGTTACCTCCTGCCCTTGCGAAATTTGAGAACTCAAAGGACGAGGACGAAGACACTGGTGTTATCATTGGTCCATCAGGTCCTCCCAAGGAATTTATGGGGCTTTCCCCCCTTAGTTCTCATGTGATGGATAATCAAATCACAGAACTTCAGGTGCTTGCTCTTGTTCCGTCCCCCTTCCCCGTGGTTCTAAGACTCCATTTTTGTTCTGGGATAGGCATTTACACAATATTTGTGATGACCCATATTTCTCTGCACATAAAACTTGTACTAATATGCGGTTTTCTCTACTTCAGCAACAGGGTTCTGCTGCCACGGGAATGGAGTTGGAAAGACTTAAGTATGATCGTGAAAAATCAGTTCAAATGCTACAACATTGGAGAAAAATGTACGATAATTTACATCAATTTTGTGTTAATGAGCTTCTGGATGGTGATCAAACTAAAATTTGAGAAGGCAATTCCCCTTGGCCATTGCTATTATTTCCCTCATGTATTCTATTTGTTTTTTACCCCTCTAAATTTTGTTTTGTTCTTCTATCTTGTGTCCTAGAAATTGTAATCGTCAAGTGGAAACAGTATTTGATAGAAATGTTTGGAAGCCATCCTTGATTAATTTAAATTCCAAAACCTTTTTCCTGGGGTAAGATCTGTACATCACCATACACAGGGAGGTACCCTTAAT

mRNA sequence

AAAGGACTTCATTGTAGGTTTTTGTTTGCTACCCAAACCAGCCGTATTCAACCCATTCTCCCATCGGGTTGGAGCTTTGAAAAAAAAAAAGAATTAAATGGTCTATTAGGGCATAAGAGAAGGGAAAGAAAAACCCATCTTCTTATTCAGCCCCTTTGCCGCCGACAACCTCCCTTCGGTCTTCTTCGCCGGCGACCTCACCCCCGAGCAGCGGGGTCGACCACGGACTCCGACGACCAGTCCCCGCGCATTAGATGATTCAGACCAATGTGCTCTTGCCCCACATTTGACGGCGGAGTCAGCTTGCAACATAAACACCCAGTTTGAACAAGTTTCGAAACATCGTTTCTTCTTCGTTTCAGACTGCAACGTGAACAACAGGTTGTGCATCACGTTTTTTGACGACTGGGTGTCTTGCAGCAGCGTTTTCGGCTTGGGGTGTAAGCTTTCGGCTGTTACCCGCACTCTGTTTGGCTTCGAATTTGTGTACCCATAACGTTTAAGGTCCAAATCTGTAAGTTTGGACGTTTTCGGACACCAACCAGCAAGGATTATTTGCCTTTTCGGTAAGATTCGGCTTTCTAAAGGTTGATGTTGGTTCCAGGAAGTGGATTTCCGGATTGAGAATTATAGGATTGTCGATTGAGCTGTTTTGGAAAGTACGGGCTGTTACACACAGTCTCGCTGCCACCGACTCATTCGACACTAGACACCTTTGTCGCTGCAGCACTCACCTTAAATATTCAAAGGCAATTGAAACTCAAACCGTCTCTCAAGCTCTCAAGTCAGAATGGTGCTACTGATTGCTTCTTCATCCATTGATTCGGGGATTGGTTGCTGGGACCTTCAAACGGGTGCGGAACAACTACGTTACAAGTCTTGTGCTTCTCCAGCACATGGTCTTGTTTGTGTTGGTGAAAAGTTTCTTGCATGCTCTCAGCTCCGCGATCCCGCTGCCACAGCAGGCTCTGTTCTCTACTGGTCTTGGTGTAAGCCTCAAGTAGAAGTTAAGAGCTTTCCGGCTGAACCATTGATGGCCTTGGCTTCCAACAATGAGGGTACTTATATCGTTGGTGGTGGTTTCTCTGGAGATATATACTTCTGGGAGGTTTTGAGTGGTAGACTGCTTAAGAAGTGGCATGCTCATTATAGGGCGGCTACTTGCCTCGTATTCTCTGAAGATGACTCCCTGCTAATTTCTGGTTCTGAAGATGGCTGCATTAGAGTTTGGTCCCTGCTAACGGTATTTGATGATGGATGGCATAGCGAATCAAAACATTTGTATCAACATAGTTTCACTGGGCATAATCTACCTGTTACCGATATTGCTGTTGGCTATGGAGGATCAAATGCTATTATAATCTCTTCCTCTGTGGATCGTACTTGTAAGGTGTGGAGCTTATCTAAGGGGAAATTATTAAGAAATATCATATTTCCTTCCATCATTGATGCAATTGCATTGGATCCTGCCGAACATGTCTTCTATGCTGGTGGTAGAGATGGGAAGATCTACACTGCTGCGCTTAATGCTAAATGCCCAGCCAGCAGTGACTACGGATTGCACATTCTCGGCTCATTATCAAATCAAAGCAAGTCTGTTACTTCCTTGGCATTCTGCTCAAGTGGTAATTTGTTGATATCCGGATCTGAGGATGGAGCAATAAGAGTTTGGGATACAAGAACCAATAATATTATTCGTGTATTCAGACATTCAAAAGGTCCTGTAAATAATATTCTTGTTGTTCGACAACAGCTCCTTCCTAAACCACAGTCAACTTCCCAAGGTTCTATGAGAAAGCATCGGTCACTGTTACCTCCTGCCCTTGCGAAATTTGAGAACTCAAAGGACGAGGACGAAGACACTGGTGTTATCATTGGTCCATCAGGTCCTCCCAAGGAATTTATGGGGCTTTCCCCCCTTAGTTCTCATGTGATGGATAATCAAATCACAGAACTTCAGCAACAGGGTTCTGCTGCCACGGGAATGGAGTTGGAAAGACTTAAGTATGATCGTGAAAAATCAGTTCAAATGCTACAACATTGGAGAAAAATGTACGATAATTTACATCAATTTTGTGTTAATGAGCTTCTGGATGGTGATCAAACTAAAATTTGAGAAGGCAATTCCCCTTGGCCATTGCTATTATTTCCCTCATGTATTCTATTTGTTTTTTACCCCTCTAAATTTTGTTTTGTTCTTCTATCTTGTGTCCTAGAAATTGTAATCGTCAAGTGGAAACAGTATTTGATAGAAATGTTTGGAAGCCATCCTTGATTAATTTAAATTCCAAAACCTTTTTCCTGGGGTAAGATCTGTACATCACCATACACAGGGAGGTACCCTTAAT

Coding sequence (CDS)

ATGGTGCTACTGATTGCTTCTTCATCCATTGATTCGGGGATTGGTTGCTGGGACCTTCAAACGGGTGCGGAACAACTACGTTACAAGTCTTGTGCTTCTCCAGCACATGGTCTTGTTTGTGTTGGTGAAAAGTTTCTTGCATGCTCTCAGCTCCGCGATCCCGCTGCCACAGCAGGCTCTGTTCTCTACTGGTCTTGGTGTAAGCCTCAAGTAGAAGTTAAGAGCTTTCCGGCTGAACCATTGATGGCCTTGGCTTCCAACAATGAGGGTACTTATATCGTTGGTGGTGGTTTCTCTGGAGATATATACTTCTGGGAGGTTTTGAGTGGTAGACTGCTTAAGAAGTGGCATGCTCATTATAGGGCGGCTACTTGCCTCGTATTCTCTGAAGATGACTCCCTGCTAATTTCTGGTTCTGAAGATGGCTGCATTAGAGTTTGGTCCCTGCTAACGGTATTTGATGATGGATGGCATAGCGAATCAAAACATTTGTATCAACATAGTTTCACTGGGCATAATCTACCTGTTACCGATATTGCTGTTGGCTATGGAGGATCAAATGCTATTATAATCTCTTCCTCTGTGGATCGTACTTGTAAGGTGTGGAGCTTATCTAAGGGGAAATTATTAAGAAATATCATATTTCCTTCCATCATTGATGCAATTGCATTGGATCCTGCCGAACATGTCTTCTATGCTGGTGGTAGAGATGGGAAGATCTACACTGCTGCGCTTAATGCTAAATGCCCAGCCAGCAGTGACTACGGATTGCACATTCTCGGCTCATTATCAAATCAAAGCAAGTCTGTTACTTCCTTGGCATTCTGCTCAAGTGGTAATTTGTTGATATCCGGATCTGAGGATGGAGCAATAAGAGTTTGGGATACAAGAACCAATAATATTATTCGTGTATTCAGACATTCAAAAGGTCCTGTAAATAATATTCTTGTTGTTCGACAACAGCTCCTTCCTAAACCACAGTCAACTTCCCAAGGTTCTATGAGAAAGCATCGGTCACTGTTACCTCCTGCCCTTGCGAAATTTGAGAACTCAAAGGACGAGGACGAAGACACTGGTGTTATCATTGGTCCATCAGGTCCTCCCAAGGAATTTATGGGGCTTTCCCCCCTTAGTTCTCATGTGATGGATAATCAAATCACAGAACTTCAGCAACAGGGTTCTGCTGCCACGGGAATGGAGTTGGAAAGACTTAAGTATGATCGTGAAAAATCAGTTCAAATGCTACAACATTGGAGAAAAATGTACGATAATTTACATCAATTTTGTGTTAATGAGCTTCTGGATGGTGATCAAACTAAAATTTGA

Protein sequence

MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGSVLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYRAATCLVFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYQHSFTGHNLPVTDIAVGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKIYTAALNAKCPASSDYGLHILGSLSNQSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHSKGPVNNILVVRQQLLPKPQSTSQGSMRKHRSLLPPALAKFENSKDEDEDTGVIIGPSGPPKEFMGLSPLSSHVMDNQITELQQQGSAATGMELERLKYDREKSVQMLQHWRKMYDNLHQFCVNELLDGDQTKI

Homology

[Close]

BLAST of CcUC05G102160 vs. NCBI nr
Match: XP_038898957.1 (protein ROOT INITIATION DEFECTIVE 3 [Benincasa hispida])

HSP 1 Score: 833.6 bits (2152), Expect = 8.1e-238
Identity = 401/440 (91.14%), Postives = 419/440 (95.23%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVL++ASSSIDSGIGCWDL TGAEQLRYKSCASPAHGLVCVGE+FLACSQLRDPAATAGS
Sbjct: 1   MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPAHGLVCVGERFLACSQLRDPAATAGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSWCKPQVEVKSFPAEP+MALASN+EGTYIVGGG SGDIY WEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNDEGTYIVGGGLSGDIYLWEVLSGRLLKKWHAHY 120

Query: 121 RAATCLVFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYQHSFTGHNLPVTDIA 180
           RA TCLVFSEDDSLLISGSEDGCIRVW+LLTVFDDGW  E+KHLY+HSFTGHNLPVTDI 
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWALLTVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIID IALDP EHVFY GGRDGKI
Sbjct: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDVIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNN 300
           YTAALNAKCP++ DYGLHILGSLSNQSKSVT+LA+CSSGNLLISGSEDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSTGDYGLHILGSLSNQSKSVTALAYCSSGNLLISGSEDGAIRVWDTRTNN 300

Query: 301 IIRVFRHSKGPVNNILVVRQQLLPKPQSTSQGSMRKHRSLLPPALAKFENSKDEDEDTGV 360
           +IRVFRHSKGPVNNIL+VRQQ+LPK QSTSQG +RKHRSLLPPALAKFENSKDEDEDTGV
Sbjct: 301 VIRVFRHSKGPVNNILLVRQQVLPKSQSTSQGFLRKHRSLLPPALAKFENSKDEDEDTGV 360

Query: 361 IIGPSGPPKEFMGLSPLSSHVMDNQITELQQQGSAATGMELERLKYDREKSVQMLQHWRK 420
           IIGP+G PKE MG   LSSHVMDNQITELQQQGSAA GMELERLKYD  KS+QMLQHWRK
Sbjct: 361 IIGPTGLPKESMGFPALSSHVMDNQITELQQQGSAANGMELERLKYDCGKSMQMLQHWRK 420

Query: 421 MYDNLHQFCVNELLDGDQTK 441
           MYDNLHQFCVNELLDGDQTK
Sbjct: 421 MYDNLHQFCVNELLDGDQTK 440

[Close]

BLAST of CcUC05G102160 vs. NCBI nr
Match: XP_008452567.1 (PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Cucumis melo])

HSP 1 Score: 823.5 bits (2126), Expect = 8.4e-235
Identity = 401/440 (91.14%), Postives = 415/440 (94.32%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVLL+ASSSIDSGIGCWDL TGAEQLRYKSCASP HGLVCVGEKFLACSQLRD AATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSWCKPQVEVKSFPAEP+MALASNNEGTYIVGGGFSGDIY WEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 121 RAATCLVFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYQHSFTGHNLPVTDIA 180
           RA TCLVFSEDDSLLISGSEDGCIRVWSL+TVFDDGW  E+KHLY+HSFTGHNLPVTDI 
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           VGYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNN 300
           YTAALNAKCP+SSDYGLHILGSLSNQSKSVTSLA+CSSGNLLISG EDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 300

Query: 301 IIRVFRHSKGPVNNILVVRQQLLPKPQSTSQGSMRKHRSLLPPALAKFENSKDEDEDTGV 360
           +IRVFRHSKGPVNNIL+V+QQ LPK QSTSQGS+RKHR +LPPALAKFENSKDEDE TGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 360

Query: 361 IIGPSGPPKEFMGLSPLSSHVMDNQITELQQQGSAATGMELERLKYDREKSVQMLQHWRK 420
           II PSGPPKE M  S LSSHVMDNQITELQQQGSAAT MELERLK+D  KS QMLQHWRK
Sbjct: 361 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 420

Query: 421 MYDNLHQFCVNELLDGDQTK 441
           MYDNLHQFCVNELLDG+QTK
Sbjct: 421 MYDNLHQFCVNELLDGNQTK 440

[Close]

BLAST of CcUC05G102160 vs. NCBI nr
Match: XP_011654116.2 (protein ROOT INITIATION DEFECTIVE 3 [Cucumis sativus])

HSP 1 Score: 821.6 bits (2121), Expect = 3.2e-234
Identity = 398/440 (90.45%), Postives = 416/440 (94.55%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVLL+ASSSIDSGIGCWDL TG+EQLRYKSCASP HGLVCVG KFLACSQLRDPAATAGS
Sbjct: 63  MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGRKFLACSQLRDPAATAGS 122

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSW KPQVEVKSFPAEP+MALASN+EGTYIVGGGFSGDIY WEVLSGRLLKKWHAHY
Sbjct: 123 VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 182

Query: 121 RAATCLVFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYQHSFTGHNLPVTDIA 180
           RA TCLVFSEDDSLL+SGSEDGCIRVWSL+TVFDDGW  E+KHLY+HSFTGHNLPVTDI 
Sbjct: 183 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 242

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           VGYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 243 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 302

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNN 300
           YTAALNAKCP+SSDYGLHILGS+SNQSKSVTSLA+CSSGNLLISGSEDGAIRVWDTRTNN
Sbjct: 303 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 362

Query: 301 IIRVFRHSKGPVNNILVVRQQLLPKPQSTSQGSMRKHRSLLPPALAKFENSKDEDEDTGV 360
           +IRVFRHSKGPVNNIL+V+QQ LPK QSTSQGS+RKHR LLPPALAKFENSKDEDE TGV
Sbjct: 363 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 422

Query: 361 IIGPSGPPKEFMGLSPLSSHVMDNQITELQQQGSAATGMELERLKYDREKSVQMLQHWRK 420
           II PSGPPKE  G S LSSHVMD+QITELQQQGSAATGMELERLK+D  KS QMLQHWRK
Sbjct: 423 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 482

Query: 421 MYDNLHQFCVNELLDGDQTK 441
           MYDNLHQFCVNELLDG+QTK
Sbjct: 483 MYDNLHQFCVNELLDGNQTK 502

[Close]

BLAST of CcUC05G102160 vs. NCBI nr
Match: KGN55205.1 (hypothetical protein Csa_012375 [Cucumis sativus])

HSP 1 Score: 821.6 bits (2121), Expect = 3.2e-234
Identity = 398/440 (90.45%), Postives = 416/440 (94.55%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVLL+ASSSIDSGIGCWDL TG+EQLRYKSCASP HGLVCVG KFLACSQLRDPAATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGRKFLACSQLRDPAATAGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSW KPQVEVKSFPAEP+MALASN+EGTYIVGGGFSGDIY WEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 121 RAATCLVFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYQHSFTGHNLPVTDIA 180
           RA TCLVFSEDDSLL+SGSEDGCIRVWSL+TVFDDGW  E+KHLY+HSFTGHNLPVTDI 
Sbjct: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           VGYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNN 300
           YTAALNAKCP+SSDYGLHILGS+SNQSKSVTSLA+CSSGNLLISGSEDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300

Query: 301 IIRVFRHSKGPVNNILVVRQQLLPKPQSTSQGSMRKHRSLLPPALAKFENSKDEDEDTGV 360
           +IRVFRHSKGPVNNIL+V+QQ LPK QSTSQGS+RKHR LLPPALAKFENSKDEDE TGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 360

Query: 361 IIGPSGPPKEFMGLSPLSSHVMDNQITELQQQGSAATGMELERLKYDREKSVQMLQHWRK 420
           II PSGPPKE  G S LSSHVMD+QITELQQQGSAATGMELERLK+D  KS QMLQHWRK
Sbjct: 361 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 420

Query: 421 MYDNLHQFCVNELLDGDQTK 441
           MYDNLHQFCVNELLDG+QTK
Sbjct: 421 MYDNLHQFCVNELLDGNQTK 440

[Close]

BLAST of CcUC05G102160 vs. NCBI nr
Match: XP_022941447.1 (protein ROOT INITIATION DEFECTIVE 3 [Cucurbita moschata] >KAG6608496.1 Protein ROOT INITIATION DEFECTIVE 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 813.1 bits (2099), Expect = 1.1e-231
Identity = 394/443 (88.94%), Postives = 415/443 (93.68%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVL++ASSS+DSGIGCWDL TGAEQLRYKSCASPAHGLVCVGE+FLACSQLRDPAAT+GS
Sbjct: 1   MVLVVASSSVDSGIGCWDLHTGAEQLRYKSCASPAHGLVCVGERFLACSQLRDPAATSGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSW KPQVEVKSFPAEP+MALASNNEGTYIVGGGFSGDIY WEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWFKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLMKWHAHY 120

Query: 121 RAATCLVFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYQHSFTGHNLPVTDIA 180
           RA TCLVFSEDDSLLISGSEDGC+RVWSLL VFDDGW  ESKHLY+HSFTGHNLPVTDI 
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCVRVWSLLKVFDDGWQRESKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           +GYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 181 IGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNN 300
           YTAALNAK P+SSDYGLHILGSLSNQSKSVTSLA+CSSGNLLISGSEDGAI+VWDTRTNN
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGSEDGAIKVWDTRTNN 300

Query: 301 IIRVFRHSKGPVNNILVVRQQLLPKPQ--STSQGSMRKHRSLLPPALAKFENSKDEDEDT 360
           IIRV +HSKGPVNN+L+VRQQLLP  Q   TSQGS+RKHRSLLPPALAKF NSKD+DEDT
Sbjct: 301 IIRVLKHSKGPVNNLLIVRQQLLPTSQLNPTSQGSLRKHRSLLPPALAKFGNSKDDDEDT 360

Query: 361 GVIIGPSGPPKEFMGLSPLSSHVMDNQITELQQQGSAATGMELERLKYDREKSVQMLQHW 420
           GVIIG SGPP E MG SP+SSHVMDNQITELQQQGSAATGMELERLK D  KS+QM Q W
Sbjct: 361 GVIIGRSGPPMESMGFSPISSHVMDNQITELQQQGSAATGMELERLKRDYGKSMQMQQQW 420

Query: 421 RKMYDNLHQFCVNELLDGDQTKI 442
           RK+YDNLHQ+CVNELLDGDQTKI
Sbjct: 421 RKLYDNLHQYCVNELLDGDQTKI 443

[Close]

BLAST of CcUC05G102160 vs. ExPASy Swiss-Prot
Match: Q9M3B4 (Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 2.1e-140
Identity = 250/437 (57.21%), Postives = 320/437 (73.23%), Query Frame = 0


Query: 2   VLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGSV 61
           + +IASSSID GIG WDL+TG EQL++K CASPAHGL  VGEKFLA SQL     T+GS+
Sbjct: 3   ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQL-SARNTSGSI 62

Query: 62  LYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYR 121
            YWSW KPQ EVKS+P EP+ ALA+NNEGTY+VGGG SGDIY WEV +G+LLKKWH HYR
Sbjct: 63  FYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYR 122

Query: 122 AATCLVFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYQHSFTGHNLPVTDIAV 181
           + TCLVFS DDSLL+SGS+DG IRVWSL+ +FDD    +   LY+H+F  H + VTDI +
Sbjct: 123 SVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVI 182

Query: 182 GYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKIY 241
            YGG NA+IISSS DRTCKVWSLS+GKLL+NIIFPS+I+A+ALDP   VFYAG RD KIY
Sbjct: 183 DYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIY 242

Query: 242 TAALNAKCPASSDYGLHILGSLSNQSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNNI 301
             A+N    A+S+YG  +LGS+S + K++T LA+C+ GNLLISGSEDG + VWD ++   
Sbjct: 243 IGAIN----ATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRH 302

Query: 302 IRVFRHS----KGPVNNILVVRQQLLPKPQSTSQGSMRKHRSLLPPALAKFENSKDEDED 361
           +R   H+    KGPVNNI +VR+ ++     T Q S +   +L+PP L K+E   ++  D
Sbjct: 303 VRTLIHAKGSRKGPVNNIQIVRKTIVANSNKT-QVSWKSRGALIPPPLEKYERPVEDTMD 362

Query: 362 TGVIIGPSGPPKEFMGL--SPLSSHVMDNQITELQQQGSAATGMELERLKYDREKSVQML 421
             V + P  PP   + +  S LS+ ++D Q+ ELQQQGSAAT ME+ERLK + ++S+QM 
Sbjct: 363 GIVTVDP--PPFSDVPVYSSFLSADLIDEQVKELQQQGSAATEMEMERLKLEYKRSLQMN 422

Query: 422 QHWRKMYDNLHQFCVNE 433
           + W+K Y+NL Q  + E
Sbjct: 423 EQWQKNYENLLQVVMEE 431

[Close]

BLAST of CcUC05G102160 vs. ExPASy Swiss-Prot
Match: A0A1L8HX76 (WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.3e-40
Identity = 98/307 (31.92%), Postives = 160/307 (52.12%), Query Frame = 0


Query: 17  WDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGSVLYWS-WCKPQVEVKS 76
           W+  TG+  L Y+   +   GL  +G ++L   QL         +  W    + Q++ K 
Sbjct: 23  WEPVTGSVLLTYRGGNTSHRGLAVLGGQYLLGGQL-----GKNYINVWELQRRDQLQQKI 82

Query: 77  FPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYRAATCLVFSEDDSLL 136
               P+  L+++  G Y+V  G +  IY WEV +G LL   ++HY+  TCL F++D S +
Sbjct: 83  VCPGPVNCLSASPNGLYLV-AGIAESIYLWEVSTGHLLAILNSHYQDVTCLTFTDDSSHI 142

Query: 137 ISGSEDGCIRVWSLLTVF--DDGWHSESKHLYQHSFTGHNLPVTDIAVGYGGSNAIIISS 196
           ISG++D  + VW L +V   +     E ++++      H+LP+TD+  G GG  A + +S
Sbjct: 143 ISGAKDSLVLVWGLYSVLQVETSRGPEPRYVWSR----HSLPITDVQCGIGGPQARVATS 202

Query: 197 SVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKIYTAALNAKCPASS 256
           S+D+T K+W +  G LL +++F   I ++A DPAE+  + GG DG IY   L    P   
Sbjct: 203 SLDQTIKLWDICSGDLLVSVLFDVRITSVAFDPAEYHLFCGGSDGVIYQVDLYT-TPEQR 262

Query: 257 DYGLHILGSL--SNQSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHSKGP 316
           +   H    +        VT L+    G++LISGS D  + VWD ++   +R   H +GP
Sbjct: 263 ERPFHPEQEMVFKGHRNQVTCLSVSLDGSMLISGSHDETVCVWDIQSKQSLRSVPH-RGP 317

Query: 317 VNNILVV 319
           V N+ ++
Sbjct: 323 VTNVFII 317

[Close]

BLAST of CcUC05G102160 vs. ExPASy Swiss-Prot
Match: Q9BV38 (WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2)

HSP 1 Score: 165.2 bits (417), Expect = 1.6e-39
Identity = 99/308 (32.14%), Postives = 158/308 (51.30%), Query Frame = 0


Query: 17  WDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGSVLYWSWCKPQVEVKSF 76
           W+L +GA  L Y+   +   GL  +  ++L  +QL     +A  +      K Q++ K  
Sbjct: 23  WELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQLGKNYISAWELQR----KDQLQQKIM 82

Query: 77  PAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYRAATCLVFSEDDSLLI 136
              P+  L ++  G Y++  G +  I+ WEV +G LL     HY+  +CL F+ D S  I
Sbjct: 83  CPGPVTCLTASPNGLYVL-AGVAESIHLWEVSTGNLLVILSRHYQDVSCLQFTGDSSHFI 142

Query: 137 SGSEDGCIRVWSLLTVF--DDGWHSESKHLYQHSFTGHNLPVTDIAVGYGGSNAIIISSS 196
           SG +D  + VWSL +V   D       +H++ H    H LP+TD+  G+GG  A + +SS
Sbjct: 143 SGGKDCLVLVWSLCSVLQADPSRIPAPRHVWSH----HALPITDLHCGFGGPLARVATSS 202

Query: 197 VDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKIYTAALNAKCPASSD 256
           +D+T K+W +S G+LL +++F   I A+ +D AEH  + GG +G I+   L    P   +
Sbjct: 203 LDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMFCGGSEGSIFQVDL-FTWPGQRE 262

Query: 257 YGLHILGSLSNQSK----SVTSLAFCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHSKG 316
              H         K     VT L+  + G++L+SGS D  +R+WD ++   IR     KG
Sbjct: 263 RSFHPEQDAGKVFKGHRNQVTCLSVSTDGSVLLSGSHDETVRLWDVQSKQCIRTVA-LKG 319

Query: 317 PVNNILVV 319
           PV N  ++
Sbjct: 323 PVTNAAIL 319

[Close]

BLAST of CcUC05G102160 vs. ExPASy Swiss-Prot
Match: Q3SZD4 (WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 8.1e-39
Identity = 97/312 (31.09%), Postives = 156/312 (50.00%), Query Frame = 0


Query: 17  WDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGSVLYWSW---CKPQVEV 76
           W+L +GA  L Y+   +   GL  +  ++L  +QL       G     +W    K Q++ 
Sbjct: 23  WELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQL-------GKNYICAWELQRKDQLQQ 82

Query: 77  KSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYRAATCLVFSEDDS 136
           K     P+  L ++  G Y++  G S +IY WEV +G LL     HY+  +CL F+ D S
Sbjct: 83  KIMCPGPVTCLTTSPNGLYVL-AGISENIYLWEVSTGNLLVILSRHYQDVSCLQFTGDSS 142

Query: 137 LLISGSEDGCIRVWSLLTVFDDGWHSESKHLYQHSFTGHNLPVTDIAVGYGGSNAIIISS 196
             ISG +D  +  WSL +V             +H ++ H LP+TD+  G+GG  A + ++
Sbjct: 143 HFISGGKDCLVLAWSLCSVLQA--DPSRTPAPRHVWSRHTLPITDLHCGFGGPLARVATA 202

Query: 197 SVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKIYTAAL-------N 256
           S+D+T K+W +S G+LL +++F   I A+ +D AEH  + GG DG I+   L        
Sbjct: 203 SLDQTVKLWEVSSGELLLSVLFDVGILAVTMDLAEHYMFCGGSDGSIFQVDLCTWPGQRE 262

Query: 257 AKCPASSDYGLHILGSLSNQSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNNIIRVFR 316
                  ++G    G        VT L+  + G++L+SGS D  +R+WD ++   +R   
Sbjct: 263 KSFQPEQEHGKVFRG----HRNQVTCLSVSTDGSVLLSGSHDETVRLWDVQSQQCLRTVT 319

Query: 317 HSKGPVNNILVV 319
             KGPV N  ++
Sbjct: 323 -LKGPVTNACIM 319

[Close]

BLAST of CcUC05G102160 vs. ExPASy Swiss-Prot
Match: Q499N3 (WD repeat-containing protein 18 OS=Rattus norvegicus OX=10116 GN=Wdr18 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.6e-37
Identity = 95/309 (30.74%), Postives = 157/309 (50.81%), Query Frame = 0


Query: 17  WDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGSVLYWSW---CKPQVEV 76
           W+L +GA  L Y+   +   GL  +  ++L        AA  G     +W    K Q++ 
Sbjct: 23  WELHSGANLLTYRGGQAGPRGLALLNGEYLL-------AAQQGKNYICAWELQRKDQLQQ 82

Query: 77  KSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYRAATCLVFSEDDS 136
           K     P+  L +   G Y++  G +  IY WEV +G LL     HY+  +CL F+ D S
Sbjct: 83  KIMCPGPVTCLTTAPNGLYVL-AGIAESIYLWEVSTGNLLVILSRHYQDVSCLKFTGDGS 142

Query: 137 LLISGSEDGCIRVWSLLTVFDDGWHSESKHLY-QHSFTGHNLPVTDIAVGYGGSNAIIIS 196
             +S  +D  +  WSL +V        S+ L  +H ++ H LP+TD+  G+GG  A + +
Sbjct: 143 HFVSAGKDCLVLAWSLCSVLQ---ADPSRILAPRHVWSQHTLPITDLHCGFGGPMARVAT 202

Query: 197 SSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKIYTAALNAKCPAS 256
           +S+D+T K+W++S G LL +++F   I ++ +D AEH  + GG DG I+   L ++ P  
Sbjct: 203 ASLDQTMKLWAISSGDLLLSVLFDMGITSVTMDLAEHYIFCGGSDGSIFQVDLCSR-PGP 262

Query: 257 SDYGLHILGSLSNQSK----SVTSLAFCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHS 316
            +       +     K     VT L+  + G++L+SGS D ++R+WD ++   +R     
Sbjct: 263 REQSFQPEQNTGKVFKGHRNQVTCLSVSTDGSILLSGSHDESVRLWDVKSKQCVRTV-PL 318

Query: 317 KGPVNNILV 318
           KGPV N  +
Sbjct: 323 KGPVTNAAI 318

[Close]

BLAST of CcUC05G102160 vs. ExPASy TrEMBL
Match: A0A1S3BU36 (protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo OX=3656 GN=LOC103493552 PE=4 SV=1)

HSP 1 Score: 823.5 bits (2126), Expect = 4.1e-235
Identity = 401/440 (91.14%), Postives = 415/440 (94.32%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVLL+ASSSIDSGIGCWDL TGAEQLRYKSCASP HGLVCVGEKFLACSQLRD AATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSWCKPQVEVKSFPAEP+MALASNNEGTYIVGGGFSGDIY WEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 121 RAATCLVFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYQHSFTGHNLPVTDIA 180
           RA TCLVFSEDDSLLISGSEDGCIRVWSL+TVFDDGW  E+KHLY+HSFTGHNLPVTDI 
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           VGYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNN 300
           YTAALNAKCP+SSDYGLHILGSLSNQSKSVTSLA+CSSGNLLISG EDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 300

Query: 301 IIRVFRHSKGPVNNILVVRQQLLPKPQSTSQGSMRKHRSLLPPALAKFENSKDEDEDTGV 360
           +IRVFRHSKGPVNNIL+V+QQ LPK QSTSQGS+RKHR +LPPALAKFENSKDEDE TGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 360

Query: 361 IIGPSGPPKEFMGLSPLSSHVMDNQITELQQQGSAATGMELERLKYDREKSVQMLQHWRK 420
           II PSGPPKE M  S LSSHVMDNQITELQQQGSAAT MELERLK+D  KS QMLQHWRK
Sbjct: 361 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 420

Query: 421 MYDNLHQFCVNELLDGDQTK 441
           MYDNLHQFCVNELLDG+QTK
Sbjct: 421 MYDNLHQFCVNELLDGNQTK 440

[Close]

BLAST of CcUC05G102160 vs. ExPASy TrEMBL
Match: A0A0A0KZT0 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639920 PE=4 SV=1)

HSP 1 Score: 821.6 bits (2121), Expect = 1.5e-234
Identity = 398/440 (90.45%), Postives = 416/440 (94.55%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVLL+ASSSIDSGIGCWDL TG+EQLRYKSCASP HGLVCVG KFLACSQLRDPAATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGRKFLACSQLRDPAATAGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSW KPQVEVKSFPAEP+MALASN+EGTYIVGGGFSGDIY WEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 121 RAATCLVFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYQHSFTGHNLPVTDIA 180
           RA TCLVFSEDDSLL+SGSEDGCIRVWSL+TVFDDGW  E+KHLY+HSFTGHNLPVTDI 
Sbjct: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           VGYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNN 300
           YTAALNAKCP+SSDYGLHILGS+SNQSKSVTSLA+CSSGNLLISGSEDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300

Query: 301 IIRVFRHSKGPVNNILVVRQQLLPKPQSTSQGSMRKHRSLLPPALAKFENSKDEDEDTGV 360
           +IRVFRHSKGPVNNIL+V+QQ LPK QSTSQGS+RKHR LLPPALAKFENSKDEDE TGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 360

Query: 361 IIGPSGPPKEFMGLSPLSSHVMDNQITELQQQGSAATGMELERLKYDREKSVQMLQHWRK 420
           II PSGPPKE  G S LSSHVMD+QITELQQQGSAATGMELERLK+D  KS QMLQHWRK
Sbjct: 361 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 420

Query: 421 MYDNLHQFCVNELLDGDQTK 441
           MYDNLHQFCVNELLDG+QTK
Sbjct: 421 MYDNLHQFCVNELLDGNQTK 440

[Close]

BLAST of CcUC05G102160 vs. ExPASy TrEMBL
Match: A0A6J1FMG7 (protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita moschata OX=3662 GN=LOC111446741 PE=4 SV=1)

HSP 1 Score: 813.1 bits (2099), Expect = 5.5e-232
Identity = 394/443 (88.94%), Postives = 415/443 (93.68%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVL++ASSS+DSGIGCWDL TGAEQLRYKSCASPAHGLVCVGE+FLACSQLRDPAAT+GS
Sbjct: 1   MVLVVASSSVDSGIGCWDLHTGAEQLRYKSCASPAHGLVCVGERFLACSQLRDPAATSGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSW KPQVEVKSFPAEP+MALASNNEGTYIVGGGFSGDIY WEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWFKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLMKWHAHY 120

Query: 121 RAATCLVFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYQHSFTGHNLPVTDIA 180
           RA TCLVFSEDDSLLISGSEDGC+RVWSLL VFDDGW  ESKHLY+HSFTGHNLPVTDI 
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCVRVWSLLKVFDDGWQRESKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           +GYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 181 IGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNN 300
           YTAALNAK P+SSDYGLHILGSLSNQSKSVTSLA+CSSGNLLISGSEDGAI+VWDTRTNN
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGSEDGAIKVWDTRTNN 300

Query: 301 IIRVFRHSKGPVNNILVVRQQLLPKPQ--STSQGSMRKHRSLLPPALAKFENSKDEDEDT 360
           IIRV +HSKGPVNN+L+VRQQLLP  Q   TSQGS+RKHRSLLPPALAKF NSKD+DEDT
Sbjct: 301 IIRVLKHSKGPVNNLLIVRQQLLPTSQLNPTSQGSLRKHRSLLPPALAKFGNSKDDDEDT 360

Query: 361 GVIIGPSGPPKEFMGLSPLSSHVMDNQITELQQQGSAATGMELERLKYDREKSVQMLQHW 420
           GVIIG SGPP E MG SP+SSHVMDNQITELQQQGSAATGMELERLK D  KS+QM Q W
Sbjct: 361 GVIIGRSGPPMESMGFSPISSHVMDNQITELQQQGSAATGMELERLKRDYGKSMQMQQQW 420

Query: 421 RKMYDNLHQFCVNELLDGDQTKI 442
           RK+YDNLHQ+CVNELLDGDQTKI
Sbjct: 421 RKLYDNLHQYCVNELLDGDQTKI 443

[Close]

BLAST of CcUC05G102160 vs. ExPASy TrEMBL
Match: A0A6J1IYT8 (protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita maxima OX=3661 GN=LOC111481134 PE=4 SV=1)

HSP 1 Score: 800.8 bits (2067), Expect = 2.8e-228
Identity = 388/443 (87.58%), Postives = 412/443 (93.00%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVL++ASSS+DSGIGCWDL TGAEQL YKSCASPAHGLVCVGE+FLACSQLRDPAAT+GS
Sbjct: 1   MVLVVASSSVDSGIGCWDLHTGAEQLCYKSCASPAHGLVCVGERFLACSQLRDPAATSGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSW KPQVEVKSFPAEP+MALASNNEGTYIVGGGFSGDIY WEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWFKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLMKWHAHY 120

Query: 121 RAATCLVFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYQHSFTGHNLPVTDIA 180
           RA TCL FSEDDSLLISGSEDGC+RVWSLL VFDDGW  ESKHLY+HSFTGHNLPVTDI 
Sbjct: 121 RAVTCLEFSEDDSLLISGSEDGCVRVWSLLKVFDDGWQRESKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           +GYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 181 IGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNN 300
           YTAALNAK P+SSDYGLHILGSLSNQSKSVTSLA+CSSGNLLISGSEDGAI+VWDTRTNN
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGSEDGAIKVWDTRTNN 300

Query: 301 IIRVFRHSKGPVNNILVVRQQLLPKPQ--STSQGSMRKHRSLLPPALAKFENSKDEDEDT 360
           IIRV +HSKGPVNN+L+V+ QLLP  Q   TSQGS+RKHRSLLPPALAKF NSKD+DEDT
Sbjct: 301 IIRVLKHSKGPVNNLLIVQHQLLPTSQLNPTSQGSLRKHRSLLPPALAKFGNSKDDDEDT 360

Query: 361 GVIIGPSGPPKEFMGLSPLSSHVMDNQITELQQQGSAATGMELERLKYDREKSVQMLQHW 420
           GVIIG SGPP E MG SP+SSHVMD+QITELQQQGSAATGMELERLK +  KS+QM Q W
Sbjct: 361 GVIIGRSGPPMESMGFSPISSHVMDHQITELQQQGSAATGMELERLKREYGKSMQMQQQW 420

Query: 421 RKMYDNLHQFCVNELLDGDQTKI 442
           RK+YDNLHQ+CVNELLDGDQTKI
Sbjct: 421 RKLYDNLHQYCVNELLDGDQTKI 443

[Close]

BLAST of CcUC05G102160 vs. ExPASy TrEMBL
Match: A0A5D3D9F7 (Protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003270 PE=4 SV=1)

HSP 1 Score: 783.9 bits (2023), Expect = 3.6e-223
Identity = 383/421 (90.97%), Postives = 396/421 (94.06%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVLL+ASSSIDSGIGCWDL TGAEQLRYKSCASP HGLVCVGEKFLACSQLRD AATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSWCKPQVEVKSFPAEP+MALASNNEGTYIVGGGFSGDIY WEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 121 RAATCLVFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYQHSFTGHNLPVTDIA 180
           RA TCLVFSEDDSLLISGSEDGCIRVWSL+TVFDDGW  E+KHLY+HSFTGHNLPVTDI 
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           VGYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNN 300
           YTAALNAKCP+SSDYGLHILGSLSNQSKSVTSLA+CSSGNLLISG EDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 300

Query: 301 IIRVFRHSKGPVNNILVVRQQLLPKPQSTSQGSMRKHRSLLPPALAKFENSKDEDEDTGV 360
           +IRVFRHSKGPVNNIL+V+QQ LPK QSTSQGS+RKHR +LPPALAKFENSKDEDE TGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 360

Query: 361 IIGPSGPPKEFMGLSPLSSHVMDNQITELQQQGSAATGMELERLKYDREKSVQMLQHWRK 420
           II PSGPPKE M  S LSSHVMDNQITELQQQGSAAT MELERLK+D  KS QMLQHWRK
Sbjct: 361 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 420

Query: 421 M 422
           M
Sbjct: 421 M 421

[Close]

BLAST of CcUC05G102160 vs. TAIR 10
Match: AT3G49180.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 500.4 bits (1287), Expect = 1.5e-141
Identity = 250/437 (57.21%), Postives = 320/437 (73.23%), Query Frame = 0


Query: 2   VLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGSV 61
           + +IASSSID GIG WDL+TG EQL++K CASPAHGL  VGEKFLA SQL     T+GS+
Sbjct: 3   ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQL-SARNTSGSI 62

Query: 62  LYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYR 121
            YWSW KPQ EVKS+P EP+ ALA+NNEGTY+VGGG SGDIY WEV +G+LLKKWH HYR
Sbjct: 63  FYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYR 122

Query: 122 AATCLVFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYQHSFTGHNLPVTDIAV 181
           + TCLVFS DDSLL+SGS+DG IRVWSL+ +FDD    +   LY+H+F  H + VTDI +
Sbjct: 123 SVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVI 182

Query: 182 GYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKIY 241
            YGG NA+IISSS DRTCKVWSLS+GKLL+NIIFPS+I+A+ALDP   VFYAG RD KIY
Sbjct: 183 DYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIY 242

Query: 242 TAALNAKCPASSDYGLHILGSLSNQSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNNI 301
             A+N    A+S+YG  +LGS+S + K++T LA+C+ GNLLISGSEDG + VWD ++   
Sbjct: 243 IGAIN----ATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRH 302

Query: 302 IRVFRHS----KGPVNNILVVRQQLLPKPQSTSQGSMRKHRSLLPPALAKFENSKDEDED 361
           +R   H+    KGPVNNI +VR+ ++     T Q S +   +L+PP L K+E   ++  D
Sbjct: 303 VRTLIHAKGSRKGPVNNIQIVRKTIVANSNKT-QVSWKSRGALIPPPLEKYERPVEDTMD 362

Query: 362 TGVIIGPSGPPKEFMGL--SPLSSHVMDNQITELQQQGSAATGMELERLKYDREKSVQML 421
             V + P  PP   + +  S LS+ ++D Q+ ELQQQGSAAT ME+ERLK + ++S+QM 
Sbjct: 363 GIVTVDP--PPFSDVPVYSSFLSADLIDEQVKELQQQGSAATEMEMERLKLEYKRSLQMN 422

Query: 422 QHWRKMYDNLHQFCVNE 433
           + W+K Y+NL Q  + E
Sbjct: 423 EQWQKNYENLLQVVMEE 431

[Close]

BLAST of CcUC05G102160 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 3.8e-15
Identity = 55/213 (25.82%), Postives = 96/213 (45.07%), Query Frame = 0


Query: 87  NNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYRAATCLVFSEDDSLLISGSEDGCIRV 146
           N +   IV G F   +  W+V +G+ LK   AH    T + F+ D SL++S S DG  R+
Sbjct: 122 NPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRI 181

Query: 147 WSLLTVFDDGWHSESKHLYQHSFTGHNLPVTDIAVGYGGSNAIIISSSVDRTCKVWSLSK 206
           W           S + H  +      N PV+   V +  +   I+  ++D T ++W++S 
Sbjct: 182 WD----------SGTGHCVKTLIDDENPPVS--FVRFSPNGKFILVGTLDNTLRLWNISS 241

Query: 207 GKLLRNIIFP-----SIIDAIALDPAEHVFYAGGRDGKIYTAALNAKCPASSDYGLHILG 266
            K L+           I  A ++   + +  +G  D  ++   LN+K          +L 
Sbjct: 242 AKFLKTYTGHVNAQYCISSAFSVTNGKRI-VSGSEDNCVHMWELNSK---------KLLQ 301

Query: 267 SLSNQSKSVTSLAFCSSGNLLISGSEDGAIRVW 295
            L   +++V ++A   + NL+ SGS D  +R+W
Sbjct: 302 KLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312

[Close]

BLAST of CcUC05G102160 vs. TAIR 10
Match: AT2G47410.1 (WD40/YVTN repeat-like-containing domain;Bromodomain )

HSP 1 Score: 73.2 bits (178), Expect = 6.0e-13
Identity = 70/263 (26.62%), Postives = 110/263 (41.83%), Query Frame = 0


Query: 113 LKKWHAHYRAATCLVFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYQHSFTGH 172
           +KK   H  A  C +F      +I+GS+D  +++WS+ T            L   S  GH
Sbjct: 229 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETA-----------LCLASCRGH 288

Query: 173 NLPVTDIAVGYGGSNAIIISSSVDRTCKVWSLSKG---KLLRNIIFPSIIDAIALDPAEH 232
              +TD+AV    +NA++ S+S D   +VW L  G    +LR       + AIA  P + 
Sbjct: 289 EGDITDLAV--SSNNALVASASNDFVIRVWRLPDGMPISVLRG--HTGAVTAIAFSPRQA 348

Query: 233 VFY---AGGRDG--KIYTAALN-----AKCPASSDYGLHILGSLSN--QSKSVTSLAFCS 292
             Y   +   DG  +I+ A  +        P+ SD      GS SN  QS  +   A+ +
Sbjct: 349 SVYQLLSSSDDGTCRIWDARYSQWLPRIYVPSPSDAN---TGSTSNASQSHQILCCAYNA 408

Query: 293 SGNLLISGSEDGAIRVWDTRTNNI---------IRVFRHSKGPVNNILVVRQQLLPKPQS 352
           +G + ++GS D   RVW     N+         + V R  +  VN +      + PK  +
Sbjct: 409 NGTIFVTGSSDSNARVWSASKPNLDDAEQPTHELDVLRGHENDVNYVQFSGCAVAPKSST 465

[Close]

BLAST of CcUC05G102160 vs. TAIR 10
Match: AT2G47410.2 (WD40/YVTN repeat-like-containing domain;Bromodomain )

HSP 1 Score: 73.2 bits (178), Expect = 6.0e-13
Identity = 70/263 (26.62%), Postives = 110/263 (41.83%), Query Frame = 0


Query: 113 LKKWHAHYRAATCLVFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYQHSFTGH 172
           +KK   H  A  C +F      +I+GS+D  +++WS+ T            L   S  GH
Sbjct: 228 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETA-----------LCLASCRGH 287

Query: 173 NLPVTDIAVGYGGSNAIIISSSVDRTCKVWSLSKG---KLLRNIIFPSIIDAIALDPAEH 232
              +TD+AV    +NA++ S+S D   +VW L  G    +LR       + AIA  P + 
Sbjct: 288 EGDITDLAV--SSNNALVASASNDFVIRVWRLPDGMPISVLRG--HTGAVTAIAFSPRQA 347

Query: 233 VFY---AGGRDG--KIYTAALN-----AKCPASSDYGLHILGSLSN--QSKSVTSLAFCS 292
             Y   +   DG  +I+ A  +        P+ SD      GS SN  QS  +   A+ +
Sbjct: 348 SVYQLLSSSDDGTCRIWDARYSQWLPRIYVPSPSDAN---TGSTSNASQSHQILCCAYNA 407

Query: 293 SGNLLISGSEDGAIRVWDTRTNNI---------IRVFRHSKGPVNNILVVRQQLLPKPQS 352
           +G + ++GS D   RVW     N+         + V R  +  VN +      + PK  +
Sbjct: 408 NGTIFVTGSSDSNARVWSASKPNLDDAEQPTHELDVLRGHENDVNYVQFSGCAVAPKSST 464

[Close]

BLAST of CcUC05G102160 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 7.8e-13
Identity = 55/226 (24.34%), Postives = 97/226 (42.92%), Query Frame = 0


Query: 84  LASNNEGTYIVGGGFSGDIYFWEVLSG-RLLKKWHAHYRAATCLVFSEDDSLLISGSEDG 143
           LA +++  Y         +  W+  S    LK    H     C+ F+   +L++SGS D 
Sbjct: 91  LAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDE 150

Query: 144 CIRVWSLLTVFDDGWHSESKHLYQHSFTGHNLPVTDIAVGYGGSNAIIISSSVDRTCKVW 203
            IR+W + T                    H++P++ +     GS  +I+S+S D +CK+W
Sbjct: 151 TIRIWEVKT-----------GKCVRMIKAHSMPISSVHFNRDGS--LIVSASHDGSCKIW 210

Query: 204 SLSKGKLLRNIIFPSIIDAIALDPAEHVFYAG-GRDGKIYTAALNAKCPASSDYG----L 263
              +G  L+ +I          D +  V +A    +GK    A        S+Y     L
Sbjct: 211 DAKEGTCLKTLID---------DKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFL 270

Query: 264 HILGSLSNQSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNNIIR 304
            +    +N+   +TS    ++G  ++SGSED  + +WD +  NI++
Sbjct: 271 KVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQ 294

The following BLAST results are available for this feature:

BLAST of CcUC05G102160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898957.1	8.1e-238	91.14	protein ROOT INITIATION DEFECTIVE 3 [Benincasa hispida]	[more]
XP_008452567.1	8.4e-235	91.14	PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Cucumis melo]	[more]
XP_011654116.2	3.2e-234	90.45	protein ROOT INITIATION DEFECTIVE 3 [Cucumis sativus]	[more]
KGN55205.1	3.2e-234	90.45	hypothetical protein Csa_012375 [Cucumis sativus]	[more]
XP_022941447.1	1.1e-231	88.94	protein ROOT INITIATION DEFECTIVE 3 [Cucurbita moschata] >KAG6608496.1 Protein R...	[more]

BLAST of CcUC05G102160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3B4	2.1e-140	57.21	Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1...	[more]
A0A1L8HX76	4.3e-40	31.92	WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1	[more]
Q9BV38	1.6e-39	32.14	WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2	[more]
Q3SZD4	8.1e-39	31.09	WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1	[more]
Q499N3	2.6e-37	30.74	WD repeat-containing protein 18 OS=Rattus norvegicus OX=10116 GN=Wdr18 PE=2 SV=1	[more]

BLAST of CcUC05G102160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BU36	4.1e-235	91.14	protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo OX=3656 GN=LOC103493552 PE=4...	[more]
A0A0A0KZT0	1.5e-234	90.45	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G...	[more]
A0A6J1FMG7	5.5e-232	88.94	protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita moschata OX=3662 GN=LOC11144674...	[more]
A0A6J1IYT8	2.8e-228	87.58	protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita maxima OX=3661 GN=LOC111481134 ...	[more]
A0A5D3D9F7	3.6e-223	90.97	Protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of CcUC05G102160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49180.1	1.5e-141	57.21	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	3.8e-15	25.82	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G47410.1	6.0e-13	26.62	WD40/YVTN repeat-like-containing domain;Bromodomain	[more]
AT2G47410.2	6.0e-13	26.62	WD40/YVTN repeat-like-containing domain;Bromodomain	[more]
AT4G02730.1	7.8e-13	24.34	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 438..441
None	No IPR available	PANTHER	PTHR18763	WD-REPEAT PROTEIN 18	coord: 3..437
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 116..149 score: 10.706503
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 263..298 score: 12.604675
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 135..149 score: 40.52 coord: 190..204 score: 36.27 coord: 282..296 score: 40.4
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 69..106 e-value: 6.2 score: 12.0 coord: 162..203 e-value: 4.3E-4 score: 29.6 coord: 256..295 e-value: 8.5E-8 score: 41.9 coord: 109..148 e-value: 8.5E-9 score: 45.2 coord: 206..244 e-value: 150.0 score: 3.2
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 260..295 e-value: 2.1E-7 score: 31.5 coord: 166..203 e-value: 8.5E-5 score: 23.3 coord: 111..148 e-value: 1.8E-5 score: 25.4
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 169..212 score: 10.107432
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 116..149 score: 12.881143
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 263..304 score: 16.490309
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 2..214 e-value: 1.2E-31 score: 111.8
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 215..323 e-value: 6.5E-17 score: 63.7
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 282..296
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 5..316

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G102160.1	CcUC05G102160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030174	regulation of DNA-dependent DNA replication initiation
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005656	nuclear pre-replicative complex
cellular_component	GO:0097344	Rix1 complex
molecular_function	GO:0005515	protein binding