CcUC05G100860 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G100860
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	jacalin-related lectin 3-like
Location	CicolChr05: 29144159 .. 29144428 (-)
RNA-Seq Expression	CcUC05G100860
Synteny	CcUC05G100860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTGTAGGTTGTTCTAGATTTCCCAGAAGAGCATCTTGTTACGATTCATGGCTACTATGATGATATATATTATTAGGGATTTGATGGCACTGTGATTCGATCGTTGACTCTGGAAACAAACAAAAGAAGTTATGGGCCATTTGGGGTTAAAAATGGAACCAAGTTTTCATTCCCAACTGTTGGGGTGAAGATCGTTGGCATCCATGGCAGATCTGGTCTCTATCTCGATGCCATTGGACTTTTTGCACTTTCAATTCAAGACTAG

mRNA sequence

ATGGAAGGATTTGATGGCACTGTGATTCGATCGTTGACTCTGGAAACAAACAAAAGAAGTTATGGGCCATTTGGGGTTAAAAATGGAACCAAGTTTTCATTCCCAACTGTTGGGGTGAAGATCGTTGGCATCCATGGCAGATCTGGTCTCTATCTCGATGCCATTGGACTTTTTGCACTTTCAATTCAAGACTAG

Coding sequence (CDS)

ATGGAAGGATTTGATGGCACTGTGATTCGATCGTTGACTCTGGAAACAAACAAAAGAAGTTATGGGCCATTTGGGGTTAAAAATGGAACCAAGTTTTCATTCCCAACTGTTGGGGTGAAGATCGTTGGCATCCATGGCAGATCTGGTCTCTATCTCGATGCCATTGGACTTTTTGCACTTTCAATTCAAGACTAG

Protein sequence

MEGFDGTVIRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGLFALSIQD

Homology

[Close]

BLAST of CcUC05G100860 vs. NCBI nr
Match: XP_038898646.1 (mannose/glucose-specific lectin-like [Benincasa hispida])

HSP 1 Score: 120.6 bits (301), Expect = 5.1e-24
Identity = 57/62 (91.94%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 3   GFDGTVIRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGLFALSI 62
           GFDGTVIRSLT+ETNKRSYGPFGV+NGTKFSFPTVGVKIVGIHGRSG+YLDAIGL ALSI
Sbjct: 549 GFDGTVIRSLTVETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGVYLDAIGLLALSI 608

Query: 63  QD 65
           Q+
Sbjct: 609 QE 610

[Close]

BLAST of CcUC05G100860 vs. NCBI nr
Match: XP_022975798.1 (jacalin-related lectin 3-like [Cucurbita maxima])

HSP 1 Score: 118.2 bits (295), Expect = 2.5e-23
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 3    GFDGTVIRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGLFALSI 62
            G D TVIRSLTLETNKR+YGPFGV+NGTKFSFPTVGVKIVG+HGRSGLYLDAIGL ALSI
Sbjct: 947  GLDATVIRSLTLETNKRTYGPFGVENGTKFSFPTVGVKIVGVHGRSGLYLDAIGLLALSI 1006

Query: 63   QD 65
            QD
Sbjct: 1007 QD 1008

[Close]

BLAST of CcUC05G100860 vs. NCBI nr
Match: KAG6591308.1 (hypothetical protein SDJN03_13654, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 118.2 bits (295), Expect = 2.5e-23
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 3   GFDGTVIRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGLFALSI 62
           G D TVIRSLTLETNKR+YGPFGV+NGTKFSFPTVGVKIVG+HGRSGLYLDAIGL ALSI
Sbjct: 397 GLDATVIRSLTLETNKRTYGPFGVENGTKFSFPTVGVKIVGVHGRSGLYLDAIGLLALSI 456

Query: 63  QD 65
           QD
Sbjct: 457 QD 458

[Close]

BLAST of CcUC05G100860 vs. NCBI nr
Match: XP_022936285.1 (jacalin-related lectin 4-like [Cucurbita moschata])

HSP 1 Score: 118.2 bits (295), Expect = 2.5e-23
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 3   GFDGTVIRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGLFALSI 62
           G D TVIRSLTLETNKR+YGPFGV+NGTKFSFPTVGVKIVG+HGRSGLYLDAIGL ALSI
Sbjct: 873 GLDATVIRSLTLETNKRTYGPFGVENGTKFSFPTVGVKIVGVHGRSGLYLDAIGLLALSI 932

Query: 63  QD 65
           QD
Sbjct: 933 QD 934

[Close]

BLAST of CcUC05G100860 vs. NCBI nr
Match: XP_023536123.1 (jacalin-related lectin 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 118.2 bits (295), Expect = 2.5e-23
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 3   GFDGTVIRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGLFALSI 62
           G D TVIRSLTLETNKR+YGPFGV+NGTKFSFPTVGVKIVG+HGRSGLYLDAIGL ALSI
Sbjct: 876 GLDATVIRSLTLETNKRTYGPFGVENGTKFSFPTVGVKIVGVHGRSGLYLDAIGLLALSI 935

Query: 63  QD 65
           QD
Sbjct: 936 QD 937

[Close]

BLAST of CcUC05G100860 vs. ExPASy Swiss-Prot
Match: F4HQX1 (Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.6e-12
Identity = 32/53 (60.38%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 6   GTV-IRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGL 58
           GT+ +RSLT E+N+R YGPFGV +GT F+ P  G KI+G HG++G YLDAIG+
Sbjct: 99  GTICVRSLTFESNRRKYGPFGVDSGTFFALPKSGSKIIGFHGKAGWYLDAIGV 151

[Close]

BLAST of CcUC05G100860 vs. ExPASy Swiss-Prot
Match: Q9SSM3 (Jacalin-related lectin 19 OS=Arabidopsis thaliana OX=3702 GN=JAL19 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.0e-10
Identity = 29/49 (59.18%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 8   VIRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIG 57
           VIRS+T ++NK+ YGP+GV+ GT F+F   G +IVG++GRSG YLD+IG
Sbjct: 101 VIRSMTFKSNKQVYGPYGVEQGTPFTFSVNGGRIVGMNGRSGWYLDSIG 149

[Close]

BLAST of CcUC05G100860 vs. ExPASy Swiss-Prot
Match: P83304 (Mannose/glucose-specific lectin (Fragment) OS=Parkia platycephala OX=185447 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.7e-09
Identity = 27/57 (47.37%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 2   EGFDGTVIRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGLF 59
           +GF+  V+ SL+  TN   +GPFG+ +GT FS P  G  + G HG+SG YLD+IG++
Sbjct: 237 KGFE--VVTSLSFITNVTKHGPFGIASGTSFSIPIEGSLVTGFHGKSGYYLDSIGIY 291

[Close]

BLAST of CcUC05G100860 vs. ExPASy Swiss-Prot
Match: P18674 (Agglutinin alpha chain OS=Maclura pomifera OX=3496 PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 4.8e-09
Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 0


Query: 1   MEGFDGTVIRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGLF 59
           +EG+  TVIRSLT +TNK++YGP+GV NGT FS P     IVG  G  G +LD   ++
Sbjct: 75  VEGY--TVIRSLTFKTNKQTYGPYGVTNGTPFSLPIENGLIVGFKGSIGYWLDYFSIY 130

[Close]

BLAST of CcUC05G100860 vs. ExPASy Swiss-Prot
Match: C0HLR9 (Mannose/glucose-specific lectin OS=Parkia pendula OX=1905032 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.8e-09
Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 7   TVIRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGLF 59
           T I SL+  TN  +YGPFG  +GT FS P     ++G HGR+G YLDAIG+F
Sbjct: 389 TTITSLSFTTNLATYGPFGKASGTSFSVPINNNTVLGFHGRAGDYLDAIGIF 440

[Close]

BLAST of CcUC05G100860 vs. ExPASy TrEMBL
Match: A0A6J1IKB1 (jacalin-related lectin 3-like OS=Cucurbita maxima OX=3661 GN=LOC111476391 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-23
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 3    GFDGTVIRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGLFALSI 62
            G D TVIRSLTLETNKR+YGPFGV+NGTKFSFPTVGVKIVG+HGRSGLYLDAIGL ALSI
Sbjct: 947  GLDATVIRSLTLETNKRTYGPFGVENGTKFSFPTVGVKIVGVHGRSGLYLDAIGLLALSI 1006

Query: 63   QD 65
            QD
Sbjct: 1007 QD 1008

[Close]

BLAST of CcUC05G100860 vs. ExPASy TrEMBL
Match: A0A6J1FD77 (jacalin-related lectin 4-like OS=Cucurbita moschata OX=3662 GN=LOC111442951 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-23
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 3   GFDGTVIRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGLFALSI 62
           G D TVIRSLTLETNKR+YGPFGV+NGTKFSFPTVGVKIVG+HGRSGLYLDAIGL ALSI
Sbjct: 873 GLDATVIRSLTLETNKRTYGPFGVENGTKFSFPTVGVKIVGVHGRSGLYLDAIGLLALSI 932

Query: 63  QD 65
           QD
Sbjct: 933 QD 934

[Close]

BLAST of CcUC05G100860 vs. ExPASy TrEMBL
Match: A0A5A7TIW6 (Agglutinin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00690 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.1e-22
Identity = 52/62 (83.87%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 3   GFDGTVIRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGLFALSI 62
           GFDGTVIRSLT+ETN R+YGPFGV+NGTKFSFP  GVK+VGIHGRSGLYLDAIGL AL +
Sbjct: 401 GFDGTVIRSLTVETNLRNYGPFGVENGTKFSFPCAGVKVVGIHGRSGLYLDAIGLLALPV 460

Query: 63  QD 65
           QD
Sbjct: 461 QD 462

[Close]

BLAST of CcUC05G100860 vs. ExPASy TrEMBL
Match: A0A1S3CRN3 (agglutinin-like OS=Cucumis melo OX=3656 GN=LOC103503934 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 9.7e-21
Identity = 50/62 (80.65%), Postives = 55/62 (88.71%), Query Frame = 0


Query: 3   GFDGTVIRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGLFALSI 62
           GFDGTVIRSLT+ TN R+YGPFGV+NGTKFSFP  GVK+VGIHGRSGLYLDAIG  AL +
Sbjct: 397 GFDGTVIRSLTVVTNLRNYGPFGVENGTKFSFPCAGVKVVGIHGRSGLYLDAIGFLALPV 456

Query: 63  QD 65
           QD
Sbjct: 457 QD 458

[Close]

BLAST of CcUC05G100860 vs. ExPASy TrEMBL
Match: A0A6J1C6X3 (jacalin-related lectin 3-like OS=Momordica charantia OX=3673 GN=LOC111008958 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.4e-19
Identity = 47/62 (75.81%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 3   GFDGTVIRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGLFALSI 62
           G++ TVIRSLT+ETNKR+YGPFGV++GTKFSFP+VG+K+VGIHGRSG+YLDAIGL A+ I
Sbjct: 858 GYNCTVIRSLTVETNKRTYGPFGVEDGTKFSFPSVGMKVVGIHGRSGVYLDAIGLDAIPI 917

Query: 63  QD 65
           +D
Sbjct: 918 KD 919

[Close]

BLAST of CcUC05G100860 vs. TAIR 10
Match: AT1G19715.1 (Mannose-binding lectin superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 2.5e-13
Identity = 32/53 (60.38%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 6   GTV-IRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGL 58
           GT+ +RSLT E+N+R YGPFGV +GT F+ P  G KI+G HG++G YLDAIG+
Sbjct: 93  GTICVRSLTFESNRRKYGPFGVDSGTFFALPKSGSKIIGFHGKAGWYLDAIGV 145

[Close]

BLAST of CcUC05G100860 vs. TAIR 10
Match: AT1G19715.2 (Mannose-binding lectin superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 2.5e-13
Identity = 32/53 (60.38%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 6   GTV-IRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGL 58
           GT+ +RSLT E+N+R YGPFGV +GT F+ P  G KI+G HG++G YLDAIG+
Sbjct: 69  GTICVRSLTFESNRRKYGPFGVDSGTFFALPKSGSKIIGFHGKAGWYLDAIGV 121

[Close]

BLAST of CcUC05G100860 vs. TAIR 10
Match: AT1G19715.3 (Mannose-binding lectin superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 2.5e-13
Identity = 32/53 (60.38%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 6   GTV-IRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGL 58
           GT+ +RSLT E+N+R YGPFGV +GT F+ P  G KI+G HG++G YLDAIG+
Sbjct: 99  GTICVRSLTFESNRRKYGPFGVDSGTFFALPKSGSKIIGFHGKAGWYLDAIGV 151

[Close]

BLAST of CcUC05G100860 vs. TAIR 10
Match: AT1G73040.1 (Mannose-binding lectin superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-11
Identity = 29/49 (59.18%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 8   VIRSLTLETNKRSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIG 57
           VIRS+T ++NK+ YGP+GV+ GT F+F   G +IVG++GRSG YLD+IG
Sbjct: 101 VIRSMTFKSNKQVYGPYGVEQGTPFTFSVNGGRIVGMNGRSGWYLDSIG 149

[Close]

BLAST of CcUC05G100860 vs. TAIR 10
Match: AT3G16460.1 (Mannose-binding lectin superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 4.9e-09
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 7   TVIRSLTLETNK-RSYGPFGVKNGTKFSFPTVGVKIVGIHGRSGLYLDAIGLF 59
           TV+ +L  +T+K ++ GPFG+ +GTKF F   G KI G HGR+G Y++AIG +
Sbjct: 493 TVVTTLIFKTSKNKTAGPFGIVSGTKFEFKKEGYKITGFHGRAGEYVNAIGAY 545

The following BLAST results are available for this feature:

BLAST of CcUC05G100860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898646.1	5.1e-24	91.94	mannose/glucose-specific lectin-like [Benincasa hispida]	[more]
XP_022975798.1	2.5e-23	90.32	jacalin-related lectin 3-like [Cucurbita maxima]	[more]
KAG6591308.1	2.5e-23	90.32	hypothetical protein SDJN03_13654, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022936285.1	2.5e-23	90.32	jacalin-related lectin 4-like [Cucurbita moschata]	[more]
XP_023536123.1	2.5e-23	90.32	jacalin-related lectin 4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC05G100860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HQX1	3.6e-12	60.38	Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1	[more]
Q9SSM3	2.0e-10	59.18	Jacalin-related lectin 19 OS=Arabidopsis thaliana OX=3702 GN=JAL19 PE=2 SV=1	[more]
P83304	3.7e-09	47.37	Mannose/glucose-specific lectin (Fragment) OS=Parkia platycephala OX=185447 PE=1...	[more]
P18674	4.8e-09	51.72	Agglutinin alpha chain OS=Maclura pomifera OX=3496 PE=1 SV=2	[more]
C0HLR9	4.8e-09	53.85	Mannose/glucose-specific lectin OS=Parkia pendula OX=1905032 PE=1 SV=1	[more]

BLAST of CcUC05G100860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IKB1	1.2e-23	90.32	jacalin-related lectin 3-like OS=Cucurbita maxima OX=3661 GN=LOC111476391 PE=3 S...	[more]
A0A6J1FD77	1.2e-23	90.32	jacalin-related lectin 4-like OS=Cucurbita moschata OX=3662 GN=LOC111442951 PE=3...	[more]
A0A5A7TIW6	5.1e-22	83.87	Agglutinin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G0069...	[more]
A0A1S3CRN3	9.7e-21	80.65	agglutinin-like OS=Cucumis melo OX=3656 GN=LOC103503934 PE=3 SV=1	[more]
A0A6J1C6X3	2.4e-19	75.81	jacalin-related lectin 3-like OS=Momordica charantia OX=3673 GN=LOC111008958 PE=...	[more]

BLAST of CcUC05G100860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19715.1	2.5e-13	60.38	Mannose-binding lectin superfamily protein	[more]
AT1G19715.2	2.5e-13	60.38	Mannose-binding lectin superfamily protein	[more]
AT1G19715.3	2.5e-13	60.38	Mannose-binding lectin superfamily protein	[more]
AT1G73040.1	1.4e-11	59.18	Mannose-binding lectin superfamily protein	[more]
AT3G16460.1	4.9e-09	49.06	Mannose-binding lectin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001229	Jacalin-like lectin domain	PFAM	PF01419	Jacalin	coord: 5..57 e-value: 4.0E-14 score: 52.7
IPR001229	Jacalin-like lectin domain	PROSITE	PS51752	JACALIN_LECTIN	coord: 1..61 score: 25.696949
IPR036404	Jacalin-like lectin domain superfamily	GENE3D	2.100.10.30		coord: 2..59 e-value: 5.9E-20 score: 74.2
IPR036404	Jacalin-like lectin domain superfamily	SUPERFAMILY	51101	Mannose-binding lectins	coord: 5..58
None	No IPR available	PANTHER	PTHR47293:SF23	SUBFAMILY NOT NAMED	coord: 7..58
None	No IPR available	PANTHER	PTHR47293	JACALIN-RELATED LECTIN 3	coord: 7..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G100860.1	CcUC05G100860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031347	regulation of defense response
biological_process	GO:2000022	regulation of jasmonic acid mediated signaling pathway
biological_process	GO:0009611	response to wounding
cellular_component	GO:0005634	nucleus
molecular_function	GO:0030246	carbohydrate binding