CcUC05G098030 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G098030
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pentatricopeptide repeat-containing protein
Location	CicolChr05: 26316097 .. 26327757 (+)
RNA-Seq Expression	CcUC05G098030
Synteny	CcUC05G098030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAACAAAGGAAAAAAAAAAAGAATGCAAAAACGAAATGCCCGAAGAAGAAAGAAAGATAATGGTTAAAGTGGTAAATTAAGATGACGATGATGATGGTGATGGGGTAAATTAAGATGACGACGACGACGACGACGACGACGATGATGCGCACAAATATCCCATAGAAAAGATAGAATCCCACTCTGTGTCTGTGTGTCGAAATGAATCTCCAAAATCCTCTCTTCCAACTCCATCGATTCTCTTTCTCTTTATCTCTCTATCTCTCTCTCTCCTAAACCCTCTTTGTGCCGCTCAACAACGGATTGCATCGGTAGAGTTATGCAGGCATAGGCTTGTGTGCCTACAAATGCATAATATCTCAAAAATCGCCAAACCGCAAAGGAATTACATATCTCAGGACACAATGGAGCCTTGAACCTCCTACTTTTCTCTGAATTCTATCGGAACTCAGCTCCTATCCTGCCGGAAAATGCTATTCCCAAAGCTTTGAGGTATTGTAAATGTAATTTTACTTGGTTAACTTTGTGAAGGGCGAGAATCATCATCCACTGGCGAAGTCTCTTTCCTAAATCGAACTTCTTCATTGATTTTGTTGATTAAAATGTTCTGATGTCGCTTGTAATTCTTAGCTCTTTGAGTATGTTCAGCACTTGTTGCAATGGTGCTTTTAGTGAATGTCAGATATATGTTCCGAGCTGTAATGGACTATCTAGAGGAATGATATGGGAGAATTTAGGGGATTTTCAAACTCCGACTTTGTCTATGGCGAATTGGAAGAAGCACAGGAAGAAGAGGAAGGAGTTTTGCCGGCTTGCAATGCAAAATCCGGAGCAAGTGATGGTGGTAAAAGGAAAGACGACAATTCCAGTGTCTGAAGATGAAATTCTTCGGGTTTTGAAATCAATGACTGATCCTACGCGTGCTCTTTCTTACTTTTACTCTGTGTCTGAGTTTCCTAGTGTGCTGCATACCACTGAGACGTGTAATTTCATGCTTGAATTCTTAAGAGTGCATGAGAGGGTGGAGGATATGGCTGCTATTTTTGAATTGATGCAGAAGAAAATTATTAGGAGGGATTTGAACACTTACTTGACTATCTTTAAAGCTCTTTCTATCAGAGGTGGGCTTCGCCAGGTGATGATTGCACTAGAGAAGATGAGAAGAGCTGGATATGTCTTGAATGCATATTCATACAATGGATTGATCCATTTGCTGATTCAATCGGGATTCTGTGGCGAGGCCTTGGAAGTTTATAGAAGAATGGTTTCAGAAGGGCTAAAGCCTAGCCTGAAGACATATTCAGCACTTATGGTTGCGTTGGGAAAGAAGAGGGACTCGGAAACGGTAATGGTTCTGTTGAAGGAGATGGAAAGTTTAGGATTGAGGCCAAATGTTTACACATTCACAATATGCATAAGAGTACTAGGTAGGGCTGGGAAAATTGATAAGGCATATGAGATATTTAGAAGAATGGATGATGAAGGTTGTGGACCTGACCTTGTTACTTATACAGTCCTCATTGATGCTCTTTGTAATGCAGGACAGTTGGAAAATGCTAAGGAATTATTTGTGAAGATGAAAGCTAATGGTCACAAACCTGATCAAGTAATCTACATTACTCTGTTGGACAAGTTCAATGATTTTGGAGACTTGGACACGGTTAAAGAATTTTGGAGTCAGATGGAAGCAGATGGGTATATGCCTGATGTAGTTACCTTCACTATTCTTGTTGATGCACTATGCAAAGCCGGAGACTTCGATGAGGCATTTGCTACTTTTGATGTCATGAGGAAGCAAGGTATCTTGCCAAATCTTCATACTTATAACGCTCTTATTTGTGGACTTTTGAGGGCAGGTAGAATTGAGGATGCACTAAAGCTTTTAGATACCATGGAATCCCTAGGTGTTCAACCTACTGCTTATACGTACATTATTTTTATTGACTACTTTGGAAAGTCCGGAGATACTGGGAAAGCTGTTGAGACCTTTGAGAAGATGAAAGCTAGAGGAATTGTTCCAAATATTGTAGCGTGCAATGCATCGTTGTACAGCCTTGCGGAAATGGGGAGGTTGAGAGAAGCAAAAAACATGTTCAATGGGCTCAGAGAGATTGGTCTTTCTCCGGATTCAGTGACCTATAACATGATGATGAAGTGTTATAGCAGAGTAGGACAAGTAGATGAGGCAGTGAATTTACTCTCTGAGATGATAAGAAATGGATGTGAACCTGATGTGATTGTGGTTAACTCTTTGATTGATTCACTTTACAAGGCTGGACGGGTTGATGAAGCATGGCAAATGTTTGACAGAATGAAGGATATGAAGCTTTCTCCAACAGTTGTGACCTATAATACGCTACTTTCTGGACTAGGGAAAGAGGGTCGAGTCCAGAAAGCCATTGAATTATTTGAAAGTATGATTAATCAAAGGTGTTCTCCAAACACGATATCTTTTAACACGCTTCTGGATTGCTTTTGCAAAAATGATGAGGTTGAGTTGGCTTTGAAAATGTTTTCTAAAATGACAGTAATGGGCTGTAAACCTGATGTCCTGACCTACAACACTGTCATTTATGGCCTGATCAAAGAAAACAAAGTAAATTATGCATTCTGGTTCTTCCACCAGTTGAAGAAATCAGTGTACCCTGATCATGTCACAATATGTACCCTCCTTCCTGGCATTGTGAAGTGTGGGCGGATAGGAGATGCTATAAAGATTGCAAAGGATTTTATGTACCAGGTCCAGTTTCGTGTAAATAGATCTTTCTGGGAAGATTTAATGGGAGGTACTTTAGTTGAAGCTGAGATGGACAACGCTATTCTATTTGCTGAAGAATTGGTATTGAATGCGATTTGCAGGGAAGACTCGTTCTTGATACCTCTAGTTAGAGTTTTGTGTAGGCATAAGAGAGCACTTTATGCTTACCAAATATTTGAGAAATTTACAAAGAATCTGGGAATCAATCCAACGCTGGCATCATACAATTGTTTGATAGGTGAGCTACTTGAAGTCCGTTGCATTGAAAAGGCCTGGGATGTTTTTCAGGATATGAAGAATGTTGCCTGTGCTCCCGATGCTTTTACTTACAACATGTTACTCGCCGTTCATGGAAAGTCAGGGAAGATCGCTGAACTCTTTGAACTGTACAAAGAGATGATTTCAAGGAGATGCAAGCCCGACGCCATAACTTACAACATTGTCATCTCCAGTCTTGCGAAATCTAATAACTTGGATAAGGCTTTAGATTTTTACTATGATCTTGTTAGTAGTGACTTCCGCCCCACTCCTCGTACTTATGGCCCTCTAATAGATGGACTAGCAAAAGTGGGGCGCTTGGAGGAAGCGATGTGGCTCTTCGATGAGATGTCAGAATATGGATGCAAGCCAAACTGTGCAATATTCAACATTCTGATTAATGGATATGGGAAAACAGGTGACACAGAAACCGCATGTCAGTTGTTTAAAAGGATGGTGAATGAGGGTATAAGGCCAGACTTGAAATCATACACCATTCTGGTAGATTGCCTCTGCCTTGCTGGAAGAGTTGACGAAGCTTTATACTATTTCAAGGAACTGAAATTGACCGGTCTTGATCCTGACTTTATTGCTTATAATCGTATAATAAACGGTCTTGGAAAATCGCAGAGGATGGAGGAAGCTCTCGCTTTATACAGTGAAATGCGAAACAGAGGCATTGTTCCTGACCTGTACACTTATAATTCATTGATGCTTAATCTTGCGCTTGCCGGAATGGTGGAACAAGCCAAGAGAATGTATGAAGACCTTCAACTTGCAGGTCTAGAACCTGATGTCTTCACTTATAACGCTCTCATTCGAGGATACAGCATGTCAGGGAACCCCGAGCATGCTTATACAGTCTACAAGAACATGATGGTCGGTGGATGCAACCCCAACGTCGGTACGTATGCTCAGCTCCCTAATCAATCTTGAAGTATCATATGCAATATTATTAAGAGCACAAGTTGTACATATTTGAATAGGATCTTTTAGATTCAGGAACACAAGTTATCGCACTTATCTGTTTTCTTGCCCATCTTGTTGGTTGCTGCAAAGTCTGGCTTTTTAGAGCAGACCTTGATAAGTGACTATTGAGAACATTACATCCGACATGAGCTGTAGCATACGTATATGTATATATATATATAGTAAAATCATTTGTAGATGTAGAAATCTTTATTCATTGTATTCGTTTATACAAATCCTTCCTCACAGAAGCTATAATGGAAGGGGAAAATGTTCGATCAGAGGAAATCAATATTGATAAAAGTTAGCATAGGATGACCATCAAGTGGATTCAGGTTGTCGAAGAAAAAAAAAAAGTTTGATGACCATGACTATATTTTCAAGTGTTTAATTTAAAGGTAAATCATTTTGGAAGAAATTGGAGTGTTTGGCAACCACTCAAAATAGCTTTTCAAATGTATTTTAATAAGTTTTTATAAAAGATGTTTAAATAAAAATAAGTTTCAAAAACATTTTTTTTCTTAAGTCAATCCAAATAGACCCTAAATTTGATAACCATTTGAGTTCTAGTTTTTGAAAATCAAGCCTACAACATTACATTCCTAGCTACTTAGTTTTAGAATGAAATTAGTTTTTAAAAATTAGTTTTTGTTCTTAGAATTTTATCAATAATTTGAATGTTTACTTAAGGAAGATAAAAACATGATTAAAATATCTGTGAGACAACAAACCCAATCTTCAAAACTAATATGTCATCAGATGGGGACTATTATGGTACTTAAGTACCTTGGAGAGCAACAATCCCATTCTAACCGATGTGGGGTAAAGGTAGTTCATACTACCTTGGTTCCTAACAATACCCCATCTTGGAAAAGTCGATATTCCAGTAGTTAGATTGATGATATTTTACTCAGAAACACCCAGTCAAAACCCTTTGCCGGTGCTCCTCTTTGGAATGTCAACAACCAGCTCTGATACAATTGTTAGGTTCCTAGGCATCTTGGAGAATAACACTCCAAAAGTCAGCTATTGAGGTGAGAGGACCAAGCCACTTAAGCCCTGTTTGATAAGAGTCTTGTTTCCTATTTCTATTTCCTATTTTCCATTCCTTGTTTCTTGTTTCTTATTTTTTTAAAACAAGAAAGAAAACTATGTTTGATAACTATTTTTGTTTCCCATTTCTTGAAAAAAGAAATATAAGCAAAAATTTGTTTGATAATTATATCTTGTTTTTTGTTTCTTGTTTTTTTTCTAAAAATATAATATAAAAAAAGCAATACATTAAATCTTGTTTTTTGCATCATATCCTTCATATGTTAGCCCAAATTTAATCGACATTATTATCTCTAACTCGAGCAATTTGTCTTAAATGATGTCTAGTCAAATTTAACTTAATTATATAATTATGTAAATATCGTAGTTGTAAAATATTAAAATTAAGCTAAATGAATATTTTAATCAGCAAAATTTATATATTATAAAATTCTATTCAATTTCTGATATACTAAAAATACTAGAATTAAAATATTATATATACACGCATATTGCAAAATTTAATACTAAAAAGTTGAAATATAAAAAATTATTAATATACATATTGAAAATTAAAATAATATATAAATCTAAATATCATATAATTTTAAAATTCAAAATTAAAATTAAAATTAAAATATAGCAAAATTACTTTTGTAAATAGCAAAATCAATAAAGAAATAAATAAAGTATGAAATATGGAAACAAATATAAAGTAAATAAATAATAGTGCCCATCTTGGAGAGTTATTATACTTATTGAAAAGTAAAATAATATATAAATATGCCTATTGGAGAATTTTAAAATTGAAAATTAAAACAAAATATAAATATGGGAGAATTATTTTAGTAACTAAAAATATTAATAAAGAAAAAATAAAATAAAATAAAAACGTGAAGAAAAAAAAAAAAAAATTTCAAGAACAATTTAAAATTCTGACGCGAAAAAGGAAAAAAGAAAAAAAAATCCAACATGTCAAAAAAAAAAAAAAAAAAATTTCTAGTGAGATTTAAACTCATGACCGGCAAAAGGAAAAAGGAAATTAATTACTATGGGCACATGATACTAATACACCAAAAGCTAGCAATGATTTCTTGTAGGGATGGTGAAAATAGAAATAGAAACAAAAACAAGATAAACTATTTTTTTGTTGTTTTAACAATTCATTTTCTAGAAATATTTCTTAATATTTAGAATCAAGAAACAAGAACAGTTATCAAACAAGTTCGTTTCTTAAAAAATGAGAAACAGAAAAAAAAAATAGAAAAAGAAAACATTATCAAATGGGCCCTTAAGTACCACATCAATTATCCCATTCTAATCGATGAGGGACAAAGATAGCTCATGCTACCTTGATTTCTAACAAAAGCCTAAAAAATTCATGGGTTCTCTAATTTAACAATCGCTCAAAAGTACATGAGAACGTAGTTACGAAAGGATAAACACAAAAATTTAACCCAAAGAAAGAATGTTCAAACAGGGAAGAAATTAGAATGGGAACTTTGATTCTAAGAGAGCTAGCTGGTTTTACAGAAAACTGTACATATTTAAAGTTGTTGACTTGACCTCATTCTACACTCAAGCACTAGAGGAGGAAAAAGGGAATGTTTTGGTAATCTGATCTGTTGAATCTCAACTAAGACATCTATGGTTACAAATCCCAGAATCCATATTTTCATAGCAAATGGGCAGAAGTATGAGTACTATACTTCCTCTTTAGAAAGAAACCACAACAGAAGAAACCATATGTGAGGTCAAAGTCTGTGGCTCAATTCATCTTTCTGCATCGATTCGGTACTGTCTGGGTCGGCACAGGCAGTGGCGGCAGGTGAAGTTTGGCCATCTATGGAGGAGTTTGATTCATTATCTTTCTTAAACTGCACCAAAATCATGGTCATGTTATCACATCCCTCACCACCAGCAGTGGAAGGTGCCAAACACCTATCAAGTACTCTCTCAACAACCACAGAGAGTTTAGTTTCCTGCATAATTTATTGCATTTATCAATTTATGAGAAGGCAGAGAAAACAGGGATGAGAAAAGTATTCATCATCTCATCTATGCCTTTTTTGTAATCCATGAAAATGAGCCTGCCAGTATTTTCAGGAGGTTTATAGAATGTCCCCACAGTTTAATCCAACAGATGCTAAGACAATGAATGATGTGGTTTGATACATATCAATAAAAGATGGTTAAAATACCACTTTGATCAAACTATCAATAACGGTTTTACTCCATTTTAGTTTCAGTGTCTTCAAATATTCGAATATCCAATTCTAGTTCCTTTACTTTTAATAAATTTTAAACTTAGTCCTGTTAATTTATAACTGATTTTGTATATAAAAAATTGTTCCTATTAACATTACTTTTATAAAAATGTATTCACGTGATGTCTATTAATCGTTATTTATTTTGATAAAATAATAATAATAATAACAACCTTGCAGAACTGAGGTTAGATTTATGGAGTAAAAAGATCAAACTCAAGATAGATTTATGTACTAAAAGGTCAAATTTTCGATTTATTAATACAGACAAAAATTAAATTTAGACAATTAAAAGTACTAGAATTAAAATGGTATTTTAAGTGGAAAAGAAAGTCATCCTAGGAGTGGAAACATCCTCATGGAAACATCCTCAAGGTCTTGGTTCAAGCTTCTAAGTTGAAAACTCACTAATTTGAAACTTTTGTTGTTAATTGGAGTGGTCAAATCTTCTCACGAATTAGTAGGGAGGGACAATATCCAATTATTAGAAAAATATTAATACAGCTAAACAACAACAAAACCTAATCTTCATTGTCGAACAATAAAATATTTTACTTACTGATTTTAGCTGTTCATGTATAAAATCTACCAGTTGCTGGTTAGACATGCAATCCCTGATAGAAATTCACGAGAATACATATTAGCCCAAAATTTCAAGATTACTTCAATAGGACTAAATTCAATACATTGTTCAAACTAATAAGCACGATTAGCACTATCATGTCAAAGTAAGTGAGATTATTATTATTATTATTATTATTATTATTATTATTCTTTTGGTGAAGAACCAAGCTTTCGCAGAGAGAAATTAAATAATATACCAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACCAAAAAAAAAAAAAAAAAAGCCTAGAAAAGGAGTTTACACAAGGTTAATGAAATACCAATACTGCTACATTAAGATAACTGTGCAAATGATATAGTTATATAATAAGAAATAGAAAACAAAAACCAAGACAAAGAGAAACCATAAATACATACCATATACCATCACAAGCTATCACAATAAACTCATCATCGTCGCAAAGCTCAACCTAGTTAAAAGATAACCCAAAAAAGAATAAAAGAATGTCATTAAAATTGTAGACCTATTTTGAAAAGAGCTCGAATCAATTAATTATTCAAGTACAATAAAAGTCGGAAGCTTCATTTTAGCAAGTAAGAGAATTTTGAAAAGGAAAAAGGTAGAAGAATTTTAATGGGTGAGAGAGAGAAGAGGATATGGTGAGATCTAGAACCGACCTCTTCCACTTCTCATGCCAAAGAATTTTGTAAGAATTATGAGTTGAATGGCTCCCTAGTCCCTTTTTGATACAAATGACTCTTATTTACCAAAATTAGAAAAATGAAATCATTTAGGATTCTCAAATAAACTACATTATTTCACATATAAAAATACCCACAATTTATCAGCCCGTTGTCAAAGAAGTAGATAGTGATGTTTTCAATAGCTAATGGAAATTTGAATTGTACATACAAAAGGTAGAATACGTACAGTGGTTACATCAGGGTTTGCAGTAATAATTTGCTTTTCAGCAGGTAAAAATTTATTCTGCTTAAATTCCATGTCACCTGCAGCAGTCGAAAAAAAAGATTTGAATATGGAATTTATTTATTCTCTTTCAGTTCATTGCTTCTCGATTCAAGAGACAATAAGAGAGAAGAGCAATGGTTTTCACCCTTTTATCACGTTTAACAACTTTAATTCAGTGAATCCAGTTAAAATGCTAAAAGCTTCAATACTCAGCTTGAATTTGTGGACCAGAAAAAACCTAAGTCCAAACTACTACATGGTAGTCTAGGAGCTACAGCAAAGTTACCGAGGAAGGTAAATAGTATGATAGTAGAACAACCATGCTATTGGACATAAAACAAAGGAAAAATATCAATTTTCGGTCCTAAAACTTTCTGTTCTATCTTAATTGGTCACAGTACTTTGAAACTTGTTTCATTTTAATCCCTGCAGTTTTAAATGCCCAAACTTGGTTCAAGTTTTTTCCAACAAATCTTAAAATTAGTCTCTATAGTTAGTTTTAAGTTTTTATTTCCTGTTCAAGATAATGCACCGTGTAAATATATTTCAAGTTCCTAGGTAGACAGAGATGGGGGCCTTTTAGCAAAAGTTAACCATAAACTATTTTTGGGGCTATTTATTGCAGCTATAGAGACTAAATTTGAAAATTTGAAAGCGTTTTTGAGTTCAATAATATACAAAGCGGAGGATTTGAGCCTCTGACTCCTAGAACTTATCAGTTGAATTACACTCATGTTAACATTTAAAAGTATAGGAACTAAAATGAAATAAGTCCTAGAGTGCAATGACCAAAGCGATACTTTAACATAAAAAAGAAAAAATTATATTAAAGGAACTTGCAATCTTCAATCAAATAACAAGACTGTTCTAGGGCCAAATCAGAGAAAGAAATTTGCCATGTAGATTTTCACATACCAATAGCTCTGGCAAGGTTCAAGCTACCATTGACTCGTCCAGCATGAATAAAACCACCAGCTTTCAGAATTCTATCCTTCTCAGCCTCAAGATCAGGCTTGTGATCTCTAGAGAGACTGTGGGCCTGTACAATAGTAACCACGTCAGAAATTATAAAGCATGCTAGCCATTTCACTGAACTCCTCAACTGTACATCTATATCCACGTGCAACATGCATGCCTTGTCCAAAGTTCTGAAAATCTGTACTTAAACAGTTAATAGAATGCTCTTTGTTGCTTTATCTAAGAATTATTCTCAAAAACAATTTTGCACACTGATTTATTAAAAACGTTTACGATTGCTATTTATTAAAATCATTCTTAAGTAAATTTGTCCACTAATTTAGGAACATATAAACGTTTAAATCAAATTATTTTAAAATAATAACTAATAGTTACATACAACTATTATATCTTTTCCTCGCTCTTTTTCAATTGGAAAGGTCTTTTGTAACTCCCCTATGGTTCTTCCCCTCTCTTGTAATTTCATATCATCAATGAAATTGTTTCTTTCACTAAAAAATAGTTACATACAACCAACTAATTTAGAAAATACATGAGGAAAAAAATAACAATCTACATCGAAAAACCATTTATTATTTTAACTGTTTCAAAGCATGGCTGCCAAACAGCCCCCAAGTCATTTCTCTCATTTATTGGCACCCAAAATTACCATATATCTTTTTACTTTTGAGCAATAGAGCAAAAACGAACCATGCACGCTCAAGATTTCCAAGCTAAAAAAATACCTGGCCCTTTCTTGATAGCACACAGCGAGAATCACCAGCATTTGCAACAACTAGTTTGTTATTTCTAATAATTGCAACACAAGCTGTACACCCGGAAGTTGGGCCAGTAAAATCAGAGTGTGGACCCTGCCAACGTTATTAAATTCGAATTTAGAATGCATAATTTTCTTCCTAACTAAACTGATAAAAGTAAAATGACAATAGAAAGCAGAGGAGAAAAATGTTGCAGATAAAATTTTTTAGCAATGTTTTACAGTTTAAAGGTAATTGAAGATCATGACATTTTTACTCATGAAAGAGACCAGGACACACAGAAATTGAGAAAAATAGGATTTTTTACTTTATGGGAATGTAAGTATTTTATATCATGGTTGCTTGCATGTGTGTCAATTATCCTAAATTTTTAAACATTCTGTTCTTTAGATTTTATTTGATCCATAATTTTAAATTTTGATCTCCTATACATCCATCAATTGGTAATTATTGAGATGTGCTAATATATGTTAGAGTTTAATCAAAATTTTCTCACATGCCTTGATTTTTTAAATGGGAAACTTGAGTTTTTATTGAGAAAAATGAATAAAATAAAATCAATGCCTTAATTTTTCAAAAACTGACGGTGTCATCTTCCTATTCAATGTGTGTGTTTGCTTCACTGTGGATCAAAAGAGAATGGGAATAAGGTTGGAATTGCACATAAGTTCAAGGGATTCTCCAGAAGGCAAGTTCTGGGTCCAAAGATAATTTTTACTAGGCAGGAAAAGGACAACCACAAGTAAGGGATTTCTAAGGCATCCGTTCCTCTCCCTAAATCAAGGGAGATTGTAAGCATCCTCTCATCATTTAGTTTTGAGATAACTGACACTATTCTACAGATGAAAAAAAATCCCTAACATCCTCCACCCAAACAAAGTTCTTA

mRNA sequence

AAAAAACAAAGGAAAAAAAAAAAGAATGCAAAAACGAAATGCCCGAAGAAGAAAGAAAGATAATGGTTAAAGTGGTAAATTAAGATGACGATGATGATGGTGATGGGGTAAATTAAGATGACGACGACGACGACGACGACGACGATGATGCGCACAAATATCCCATAGAAAAGATAGAATCCCACTCTGTGTCTGTGTGTCGAAATGAATCTCCAAAATCCTCTCTTCCAACTCCATCGATTCTCTTTCTCTTTATCTCTCTATCTCTCTCTCTCCTAAACCCTCTTTGTGCCGCTCAACAACGGATTGCATCGGTAGAGTTATGCAGGCATAGGCTTGTGTGCCTACAAATGCATAATATCTCAAAAATCGCCAAACCGCAAAGGAATTACATATCTCAGGACACAATGGAGCCTTGAACCTCCTACTTTTCTCTGAATTCTATCGGAACTCAGCTCCTATCCTGCCGGAAAATGCTATTCCCAAAGCTTTGAGGTATTGTAAATGTAATTTTACTTGGTTAACTTTGTGAAGGGCGAGAATCATCATCCACTGGCGAAGTCTCTTTCCTAAATCGAACTTCTTCATTGATTTTGTTGATTAAAATGTTCTGATGTCGCTTGTAATTCTTAGCTCTTTGAGTATGTTCAGCACTTGTTGCAATGGTGCTTTTAGTGAATGTCAGATATATGTTCCGAGCTGTAATGGACTATCTAGAGGAATGATATGGGAGAATTTAGGGGATTTTCAAACTCCGACTTTGTCTATGGCGAATTGGAAGAAGCACAGGAAGAAGAGGAAGGAGTTTTGCCGGCTTGCAATGCAAAATCCGGAGCAAGTGATGGTGGTAAAAGGAAAGACGACAATTCCAGTGTCTGAAGATGAAATTCTTCGGGTTTTGAAATCAATGACTGATCCTACGCGTGCTCTTTCTTACTTTTACTCTGTGTCTGAGTTTCCTAGTGTGCTGCATACCACTGAGACGTGTAATTTCATGCTTGAATTCTTAAGAGTGCATGAGAGGGTGGAGGATATGGCTGCTATTTTTGAATTGATGCAGAAGAAAATTATTAGGAGGGATTTGAACACTTACTTGACTATCTTTAAAGCTCTTTCTATCAGAGGTGGGCTTCGCCAGGTGATGATTGCACTAGAGAAGATGAGAAGAGCTGGATATGTCTTGAATGCATATTCATACAATGGATTGATCCATTTGCTGATTCAATCGGGATTCTGTGGCGAGGCCTTGGAAGTTTATAGAAGAATGGTTTCAGAAGGGCTAAAGCCTAGCCTGAAGACATATTCAGCACTTATGGTTGCGTTGGGAAAGAAGAGGGACTCGGAAACGGTAATGGTTCTGTTGAAGGAGATGGAAAGTTTAGGATTGAGGCCAAATGTTTACACATTCACAATATGCATAAGAGTACTAGGTAGGGCTGGGAAAATTGATAAGGCATATGAGATATTTAGAAGAATGGATGATGAAGGTTGTGGACCTGACCTTGTTACTTATACAGTCCTCATTGATGCTCTTTGTAATGCAGGACAGTTGGAAAATGCTAAGGAATTATTTGTGAAGATGAAAGCTAATGGTCACAAACCTGATCAAGTAATCTACATTACTCTGTTGGACAAGTTCAATGATTTTGGAGACTTGGACACGGTTAAAGAATTTTGGAGTCAGATGGAAGCAGATGGGTATATGCCTGATGTAGTTACCTTCACTATTCTTGTTGATGCACTATGCAAAGCCGGAGACTTCGATGAGGCATTTGCTACTTTTGATGTCATGAGGAAGCAAGGTATCTTGCCAAATCTTCATACTTATAACGCTCTTATTTGTGGACTTTTGAGGGCAGGTAGAATTGAGGATGCACTAAAGCTTTTAGATACCATGGAATCCCTAGGTGTTCAACCTACTGCTTATACGTACATTATTTTTATTGACTACTTTGGAAAGTCCGGAGATACTGGGAAAGCTGTTGAGACCTTTGAGAAGATGAAAGCTAGAGGAATTGTTCCAAATATTGTAGCGTGCAATGCATCGTTGTACAGCCTTGCGGAAATGGGGAGGTTGAGAGAAGCAAAAAACATGTTCAATGGGCTCAGAGAGATTGGTCTTTCTCCGGATTCAGTGACCTATAACATGATGATGAAGTGTTATAGCAGAGTAGGACAAGTAGATGAGGCAGTGAATTTACTCTCTGAGATGATAAGAAATGGATGTGAACCTGATGTGATTGTGGTTAACTCTTTGATTGATTCACTTTACAAGGCTGGACGGGTTGATGAAGCATGGCAAATGTTTGACAGAATGAAGGATATGAAGCTTTCTCCAACAGTTGTGACCTATAATACGCTACTTTCTGGACTAGGGAAAGAGGGTCGAGTCCAGAAAGCCATTGAATTATTTGAAAGTATGATTAATCAAAGGTGTTCTCCAAACACGATATCTTTTAACACGCTTCTGGATTGCTTTTGCAAAAATGATGAGGTTGAGTTGGCTTTGAAAATGTTTTCTAAAATGACAGTAATGGGCTGTAAACCTGATGTCCTGACCTACAACACTGTCATTTATGGCCTGATCAAAGAAAACAAAGTAAATTATGCATTCTGGTTCTTCCACCAGTTGAAGAAATCAGTGTACCCTGATCATGTCACAATATGTACCCTCCTTCCTGGCATTGTGAAGTGTGGGCGGATAGGAGATGCTATAAAGATTGCAAAGGATTTTATGTACCAGGTCCAGTTTCGTGTAAATAGATCTTTCTGGGAAGATTTAATGGGAGGTACTTTAGTTGAAGCTGAGATGGACAACGCTATTCTATTTGCTGAAGAATTGGTATTGAATGCGATTTGCAGGGAAGACTCGTTCTTGATACCTCTAGTTAGAGTTTTGTGTAGGCATAAGAGAGCACTTTATGCTTACCAAATATTTGAGAAATTTACAAAGAATCTGGGAATCAATCCAACGCTGGCATCATACAATTGTTTGATAGGTGAGCTACTTGAAGTCCGTTGCATTGAAAAGGCCTGGGATGTTTTTCAGGATATGAAGAATGTTGCCTGTGCTCCCGATGCTTTTACTTACAACATGTTACTCGCCGTTCATGGAAAGTCAGGGAAGATCGCTGAACTCTTTGAACTGTACAAAGAGATGATTTCAAGGAGATGCAAGCCCGACGCCATAACTTACAACATTGTCATCTCCAGTCTTGCGAAATCTAATAACTTGGATAAGGCTTTAGATTTTTACTATGATCTTGTTAGTAGTGACTTCCGCCCCACTCCTCGTACTTATGGCCCTCTAATAGATGGACTAGCAAAAGTGGGGCGCTTGGAGGAAGCGATGTGGCTCTTCGATGAGATGTCAGAATATGGATGCAAGCCAAACTGTGCAATATTCAACATTCTGATTAATGGATATGGGAAAACAGGTGACACAGAAACCGCATGTCAGTTGTTTAAAAGGATGGTGAATGAGGGTATAAGGCCAGACTTGAAATCATACACCATTCTGGTAGATTGCCTCTGCCTTGCTGGAAGAGTTGACGAAGCTTTATACTATTTCAAGGAACTGAAATTGACCGGTCTTGATCCTGACTTTATTGCTTATAATCGTATAATAAACGGTCTTGGAAAATCGCAGAGGATGGAGGAAGCTCTCGCTTTATACAGTGAAATGCGAAACAGAGGCATTGTTCCTGACCTGTACACTTATAATTCATTGATGCTTAATCTTGCGCTTGCCGGAATGGTGGAACAAGCCAAGAGAATGTATGAAGACCTTCAACTTGCAGGTCTAGAACCTGATGTCTTCACTTATAACGCTCTCATTCGAGGATACAGCATGTCAGGGAACCCCGAGCATGCTTATACAGTCTACAAGAACATGATGGTCGGTGGATGCAACCCCAACGTCGAGAATGGGAATAAGGTTGGAATTGCACATAAGTTCAAGGGATTCTCCAGAAGGCAAGTTCTGGGTCCAAAGATAATTTTTACTAGGCAGGAAAAGGACAACCACAAGTAAGGGATTTCTAAGGCATCCGTTCCTCTCCCTAAATCAAGGGAGATTGTAAGCATCCTCTCATCATTTAGTTTTGAGATAACTGACACTATTCTACAGATGAAAAAAAATCCCTAACATCCTCCACCCAAACAAAGTTCTTA

Coding sequence (CDS)

ATGTCGCTTGTAATTCTTAGCTCTTTGAGTATGTTCAGCACTTGTTGCAATGGTGCTTTTAGTGAATGTCAGATATATGTTCCGAGCTGTAATGGACTATCTAGAGGAATGATATGGGAGAATTTAGGGGATTTTCAAACTCCGACTTTGTCTATGGCGAATTGGAAGAAGCACAGGAAGAAGAGGAAGGAGTTTTGCCGGCTTGCAATGCAAAATCCGGAGCAAGTGATGGTGGTAAAAGGAAAGACGACAATTCCAGTGTCTGAAGATGAAATTCTTCGGGTTTTGAAATCAATGACTGATCCTACGCGTGCTCTTTCTTACTTTTACTCTGTGTCTGAGTTTCCTAGTGTGCTGCATACCACTGAGACGTGTAATTTCATGCTTGAATTCTTAAGAGTGCATGAGAGGGTGGAGGATATGGCTGCTATTTTTGAATTGATGCAGAAGAAAATTATTAGGAGGGATTTGAACACTTACTTGACTATCTTTAAAGCTCTTTCTATCAGAGGTGGGCTTCGCCAGGTGATGATTGCACTAGAGAAGATGAGAAGAGCTGGATATGTCTTGAATGCATATTCATACAATGGATTGATCCATTTGCTGATTCAATCGGGATTCTGTGGCGAGGCCTTGGAAGTTTATAGAAGAATGGTTTCAGAAGGGCTAAAGCCTAGCCTGAAGACATATTCAGCACTTATGGTTGCGTTGGGAAAGAAGAGGGACTCGGAAACGGTAATGGTTCTGTTGAAGGAGATGGAAAGTTTAGGATTGAGGCCAAATGTTTACACATTCACAATATGCATAAGAGTACTAGGTAGGGCTGGGAAAATTGATAAGGCATATGAGATATTTAGAAGAATGGATGATGAAGGTTGTGGACCTGACCTTGTTACTTATACAGTCCTCATTGATGCTCTTTGTAATGCAGGACAGTTGGAAAATGCTAAGGAATTATTTGTGAAGATGAAAGCTAATGGTCACAAACCTGATCAAGTAATCTACATTACTCTGTTGGACAAGTTCAATGATTTTGGAGACTTGGACACGGTTAAAGAATTTTGGAGTCAGATGGAAGCAGATGGGTATATGCCTGATGTAGTTACCTTCACTATTCTTGTTGATGCACTATGCAAAGCCGGAGACTTCGATGAGGCATTTGCTACTTTTGATGTCATGAGGAAGCAAGGTATCTTGCCAAATCTTCATACTTATAACGCTCTTATTTGTGGACTTTTGAGGGCAGGTAGAATTGAGGATGCACTAAAGCTTTTAGATACCATGGAATCCCTAGGTGTTCAACCTACTGCTTATACGTACATTATTTTTATTGACTACTTTGGAAAGTCCGGAGATACTGGGAAAGCTGTTGAGACCTTTGAGAAGATGAAAGCTAGAGGAATTGTTCCAAATATTGTAGCGTGCAATGCATCGTTGTACAGCCTTGCGGAAATGGGGAGGTTGAGAGAAGCAAAAAACATGTTCAATGGGCTCAGAGAGATTGGTCTTTCTCCGGATTCAGTGACCTATAACATGATGATGAAGTGTTATAGCAGAGTAGGACAAGTAGATGAGGCAGTGAATTTACTCTCTGAGATGATAAGAAATGGATGTGAACCTGATGTGATTGTGGTTAACTCTTTGATTGATTCACTTTACAAGGCTGGACGGGTTGATGAAGCATGGCAAATGTTTGACAGAATGAAGGATATGAAGCTTTCTCCAACAGTTGTGACCTATAATACGCTACTTTCTGGACTAGGGAAAGAGGGTCGAGTCCAGAAAGCCATTGAATTATTTGAAAGTATGATTAATCAAAGGTGTTCTCCAAACACGATATCTTTTAACACGCTTCTGGATTGCTTTTGCAAAAATGATGAGGTTGAGTTGGCTTTGAAAATGTTTTCTAAAATGACAGTAATGGGCTGTAAACCTGATGTCCTGACCTACAACACTGTCATTTATGGCCTGATCAAAGAAAACAAAGTAAATTATGCATTCTGGTTCTTCCACCAGTTGAAGAAATCAGTGTACCCTGATCATGTCACAATATGTACCCTCCTTCCTGGCATTGTGAAGTGTGGGCGGATAGGAGATGCTATAAAGATTGCAAAGGATTTTATGTACCAGGTCCAGTTTCGTGTAAATAGATCTTTCTGGGAAGATTTAATGGGAGGTACTTTAGTTGAAGCTGAGATGGACAACGCTATTCTATTTGCTGAAGAATTGGTATTGAATGCGATTTGCAGGGAAGACTCGTTCTTGATACCTCTAGTTAGAGTTTTGTGTAGGCATAAGAGAGCACTTTATGCTTACCAAATATTTGAGAAATTTACAAAGAATCTGGGAATCAATCCAACGCTGGCATCATACAATTGTTTGATAGGTGAGCTACTTGAAGTCCGTTGCATTGAAAAGGCCTGGGATGTTTTTCAGGATATGAAGAATGTTGCCTGTGCTCCCGATGCTTTTACTTACAACATGTTACTCGCCGTTCATGGAAAGTCAGGGAAGATCGCTGAACTCTTTGAACTGTACAAAGAGATGATTTCAAGGAGATGCAAGCCCGACGCCATAACTTACAACATTGTCATCTCCAGTCTTGCGAAATCTAATAACTTGGATAAGGCTTTAGATTTTTACTATGATCTTGTTAGTAGTGACTTCCGCCCCACTCCTCGTACTTATGGCCCTCTAATAGATGGACTAGCAAAAGTGGGGCGCTTGGAGGAAGCGATGTGGCTCTTCGATGAGATGTCAGAATATGGATGCAAGCCAAACTGTGCAATATTCAACATTCTGATTAATGGATATGGGAAAACAGGTGACACAGAAACCGCATGTCAGTTGTTTAAAAGGATGGTGAATGAGGGTATAAGGCCAGACTTGAAATCATACACCATTCTGGTAGATTGCCTCTGCCTTGCTGGAAGAGTTGACGAAGCTTTATACTATTTCAAGGAACTGAAATTGACCGGTCTTGATCCTGACTTTATTGCTTATAATCGTATAATAAACGGTCTTGGAAAATCGCAGAGGATGGAGGAAGCTCTCGCTTTATACAGTGAAATGCGAAACAGAGGCATTGTTCCTGACCTGTACACTTATAATTCATTGATGCTTAATCTTGCGCTTGCCGGAATGGTGGAACAAGCCAAGAGAATGTATGAAGACCTTCAACTTGCAGGTCTAGAACCTGATGTCTTCACTTATAACGCTCTCATTCGAGGATACAGCATGTCAGGGAACCCCGAGCATGCTTATACAGTCTACAAGAACATGATGGTCGGTGGATGCAACCCCAACGTCGAGAATGGGAATAAGGTTGGAATTGCACATAAGTTCAAGGGATTCTCCAGAAGGCAAGTTCTGGGTCCAAAGATAATTTTTACTAGGCAGGAAAAGGACAACCACAAGTAA

Protein sequence

MSLVILSSLSMFSTCCNGAFSECQIYVPSCNGLSRGMIWENLGDFQTPTLSMANWKKHRKKRKEFCRLAMQNPEQVMVVKGKTTIPVSEDEILRVLKSMTDPTRALSYFYSVSEFPSVLHTTETCNFMLEFLRVHERVEDMAAIFELMQKKIIRRDLNTYLTIFKALSIRGGLRQVMIALEKMRRAGYVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSETVMVLLKEMESLGLRPNVYTFTICIRVLGRAGKIDKAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQMEADGYMPDVVTFTILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNALICGLLRAGRIEDALKLLDTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAEMGRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMINQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMGCKPDVLTYNTVIYGLIKENKVNYAFWFFHQLKKSVYPDHVTICTLLPGIVKCGRIGDAIKIAKDFMYQVQFRVNRSFWEDLMGGTLVEAEMDNAILFAEELVLNAICREDSFLIPLVRVLCRHKRALYAYQIFEKFTKNLGINPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAFTYNMLLAVHGKSGKIAELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMWLFDEMSEYGCKPNCAIFNILINGYGKTGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFKELKLTGLDPDFIAYNRIINGLGKSQRMEEALALYSEMRNRGIVPDLYTYNSLMLNLALAGMVEQAKRMYEDLQLAGLEPDVFTYNALIRGYSMSGNPEHAYTVYKNMMVGGCNPNVENGNKVGIAHKFKGFSRRQVLGPKIIFTRQEKDNHK

Homology

[Close]

BLAST of CcUC05G098030 vs. NCBI nr
Match: XP_038897914.1 (pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Benincasa hispida])

HSP 1 Score: 2113.2 bits (5474), Expect = 0.0e+00
Identity = 1035/1093 (94.69%), Postives = 1066/1093 (97.53%), Query Frame = 0


Query: 11   MFSTCCNGAFSECQIYVPSCNGLSRGMIWENLGDFQTPTLSMANWKKHRKKRKEFCRLAM 70
            MF TCCNGAFSECQIYV S NGL RG+IWE+LGDFQT TLSMANWKKHRKKRK+FCRLA+
Sbjct: 1    MFGTCCNGAFSECQIYVSSYNGLFRGLIWESLGDFQTATLSMANWKKHRKKRKDFCRLAL 60

Query: 71   QNPEQVMVVKGKTTIPVSEDEILRVLKSMTDPTRALSYFYSVSEFPSVLHTTETCNFMLE 130
            QNPEQVMVVKGKT IPVSEDEILRVLKSM  P  ALSYFYS+SEFP+VLHTTETCNFMLE
Sbjct: 61   QNPEQVMVVKGKTKIPVSEDEILRVLKSMKGPICALSYFYSISEFPNVLHTTETCNFMLE 120

Query: 131  FLRVHERVEDMAAIFELMQKKIIRRDLNTYLTIFKALSIRGGLRQVMIALEKMRRAGYVL 190
            FLRVH++VEDMAAIFELMQKKIIRRDLNTYLTIFKALSIRGGLRQV IAL+KMRRAGY+L
Sbjct: 121  FLRVHDKVEDMAAIFELMQKKIIRRDLNTYLTIFKALSIRGGLRQVTIALKKMRRAGYIL 180

Query: 191  NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSETVMVLL 250
            NAYSYNGLIHLLIQSGFCGEALEVYRRM+SEGLKPSLKTYSALMVALGKKRDSETVMVLL
Sbjct: 181  NAYSYNGLIHLLIQSGFCGEALEVYRRMISEGLKPSLKTYSALMVALGKKRDSETVMVLL 240

Query: 251  KEMESLGLRPNVYTFTICIRVLGRAGKIDKAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310
            KEMESLGLRPNVYTFTICIRVLGRAGKID+AYEIFRRMDDEGCGPDLVTYTVLIDALCNA
Sbjct: 241  KEMESLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 300

Query: 311  GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQMEADGYMPDVVTF 370
            G+LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQMEADGYMPDVVTF
Sbjct: 301  GRLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQMEADGYMPDVVTF 360

Query: 371  TILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNALICGLLRAGRIEDALKLLDTMES 430
            TILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYN LICGLL+AGRI+DALKLLDTMES
Sbjct: 361  TILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIDDALKLLDTMES 420

Query: 431  LGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAEMGRLRE 490
            LGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAEMGRLRE
Sbjct: 421  LGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAEMGRLRE 480

Query: 491  AKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550
            AKNMFNGLREIGLSPDSVTYNMMMKCYS+VGQVDEAVNLLSEMIRNGCEPDVIVVNSLID
Sbjct: 481  AKNMFNGLREIGLSPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 540

Query: 551  SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMINQRCSP 610
            SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKA+ELFESMI Q CSP
Sbjct: 541  SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAVELFESMIKQSCSP 600

Query: 611  NTISFNTLLDCFCKNDEVELALKMFSKMTVMGCKPDVLTYNTVIYGLIKENKVNYAFWFF 670
            NTISFNTLLDCFCKNDEVELALKMFSKMTV  CKPDVLTYNTVIYGLIKENKVNYAFWFF
Sbjct: 601  NTISFNTLLDCFCKNDEVELALKMFSKMTVTDCKPDVLTYNTVIYGLIKENKVNYAFWFF 660

Query: 671  HQLKKSVYPDHVTICTLLPGIVKCGRIGDAIKIAKDFMYQVQFRVNRSFWEDLMGGTLVE 730
            HQLKKS+YPDHVTICTLLPGIVKCGRI DAIKIAKDFMYQVQFRVNRSFWEDLMGGTLVE
Sbjct: 661  HQLKKSMYPDHVTICTLLPGIVKCGRIVDAIKIAKDFMYQVQFRVNRSFWEDLMGGTLVE 720

Query: 731  AEMDNAILFAEELVLNAICREDSFLIPLVRVLCRHKRALYAYQIFEKFTKNLGINPTLAS 790
            AEMD AI+FAEELVLN ICREDSFLIPLVRVLC+HKRALYAYQIFEKFTK+LGINPTLAS
Sbjct: 721  AEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRALYAYQIFEKFTKSLGINPTLAS 780

Query: 791  YNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAFTYNMLLAVHGKSGKIAELFELYKEMI 850
            YNCLIGELLEV   EKAWD+FQDMKNV CAPDAFTYNMLLAVHGKSG++ ELFELYKEMI
Sbjct: 781  YNCLIGELLEVHYTEKAWDLFQDMKNVGCAPDAFTYNMLLAVHGKSGEVTELFELYKEMI 840

Query: 851  SRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPLIDGLAKVGRLE 910
            SRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPLIDGLAKVGRLE
Sbjct: 841  SRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPLIDGLAKVGRLE 900

Query: 911  EAMWLFDEMSEYGCKPNCAIFNILINGYGKTGDTETACQLFKRMVNEGIRPDLKSYTILV 970
            EAMWLF+EMS+YGCKPNCAIFNILINGYGKT DTETACQLFKRMVNEGIRPDLKSYTILV
Sbjct: 901  EAMWLFEEMSDYGCKPNCAIFNILINGYGKTSDTETACQLFKRMVNEGIRPDLKSYTILV 960

Query: 971  DCLCLAGRVDEALYYFKELKLTGLDPDFIAYNRIINGLGKSQRMEEALALYSEMRNRGIV 1030
            DCLCLAGRVDEALYYF+ELK TGLDPDFIAYNRIINGLGKSQRMEEAL+LY+EMRNRGIV
Sbjct: 961  DCLCLAGRVDEALYYFEELKSTGLDPDFIAYNRIINGLGKSQRMEEALSLYNEMRNRGIV 1020

Query: 1031 PDLYTYNSLMLNLALAGMVEQAKRMYEDLQLAGLEPDVFTYNALIRGYSMSGNPEHAYTV 1090
            PDLYTYNSLMLNL LAGMVEQAKR+YE+LQLAGLEPDVFTYNALIRGYSMSGNPEHAYTV
Sbjct: 1021 PDLYTYNSLMLNLGLAGMVEQAKRIYEELQLAGLEPDVFTYNALIRGYSMSGNPEHAYTV 1080

Query: 1091 YKNMMVGGCNPNV 1104
            YKNMMVGGCNPNV
Sbjct: 1081 YKNMMVGGCNPNV 1093

[Close]

BLAST of CcUC05G098030 vs. NCBI nr
Match: XP_008452843.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g31850, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 2095.5 bits (5428), Expect = 0.0e+00
Identity = 1024/1103 (92.84%), Postives = 1067/1103 (96.74%), Query Frame = 0


Query: 1    MSLVILSSLSMFSTCCNGAFSECQIYVPSCNGLSRGMIWENLGDFQTPTLSMANWKKHRK 60
            MSLVI++SLSMF TCCNGAFSECQIYV SCN  SRG+IWE+LGDFQT TLSM NWKKHRK
Sbjct: 1    MSLVIVTSLSMFGTCCNGAFSECQIYVSSCNRSSRGLIWESLGDFQTATLSMVNWKKHRK 60

Query: 61   KRKEFCRLAMQNPEQVMVVKGKTTIPVSEDEILRVLKSMTDPTRALSYFYSVSEFPSVLH 120
            KRK+FCRLA+QNPEQVMVVKGKT I VSEDE+L VLKSMTDP RALSYFYS+SEFP+VLH
Sbjct: 61   KRKDFCRLALQNPEQVMVVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLH 120

Query: 121  TTETCNFMLEFLRVHERVEDMAAIFELMQKKIIRRDLNTYLTIFKALSIRGGLRQVMIAL 180
            TTETCNFMLEFLRVH++VEDMAA+F+LMQKKIIRRDLNTYLTIFKALSIRGGLRQ+   L
Sbjct: 121  TTETCNFMLEFLRVHDKVEDMAAVFDLMQKKIIRRDLNTYLTIFKALSIRGGLRQMTTVL 180

Query: 181  EKMRRAGYVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK 240
             KMRRAG+VLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK
Sbjct: 181  NKMRRAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK 240

Query: 241  RDSETVMVLLKEMESLGLRPNVYTFTICIRVLGRAGKIDKAYEIFRRMDDEGCGPDLVTY 300
            RDSETV+VLLKEME LGLRPNVYTFTICIRVLGRAGKID+AYEIFRRMDDEGCGPDLVTY
Sbjct: 241  RDSETVIVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTY 300

Query: 301  TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQMEA 360
            TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT KEFW+QMEA
Sbjct: 301  TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWNQMEA 360

Query: 361  DGYMPDVVTFTILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNALICGLLRAGRIED 420
            DGYMPDVVTFTILVDALCKAGDF EAFATFDVMRKQGILPNLHTYN+LICGLLRAGRIED
Sbjct: 361  DGYMPDVVTFTILVDALCKAGDFVEAFATFDVMRKQGILPNLHTYNSLICGLLRAGRIED 420

Query: 421  ALKLLDTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLY 480
            ALKLLDTMES+GV+PTAYTYIIFIDYFGKSGDTGKAVETFEKMKA+GIVPNIVACNASLY
Sbjct: 421  ALKLLDTMESVGVRPTAYTYIIFIDYFGKSGDTGKAVETFEKMKAKGIVPNIVACNASLY 480

Query: 481  SLAEMGRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEAVNLLSEMIRNGCEP 540
            SLAEMGRLREAK MFNGLRE GL+PDSVTYNMMMKCYS+VGQVDEAVNLLSEMIRNGCEP
Sbjct: 481  SLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 541  DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600
            DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF
Sbjct: 541  DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600

Query: 601  ESMINQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMGCKPDVLTYNTVIYGLIKE 660
            ESMI QRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVM CKPDVLTYNTVIYGLIKE
Sbjct: 601  ESMIEQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660

Query: 661  NKVNYAFWFFHQLKKSVYPDHVTICTLLPGIVKCGRIGDAIKIAKDFMYQVQFRVNRSFW 720
            NKVN+AFWFFHQLKKS++PDHVTICTLLPG+VKCGRIGDAIKIA+DFMYQV+FRVNRSFW
Sbjct: 661  NKVNHAFWFFHQLKKSIHPDHVTICTLLPGLVKCGRIGDAIKIARDFMYQVRFRVNRSFW 720

Query: 721  EDLMGGTLVEAEMDNAILFAEELVLNAICREDSFLIPLVRVLCRHKRALYAYQIFEKFTK 780
            EDLMGGTLVEAEMD AI+FAEELVLN ICREDSFLIPLVRVLC+HKR LYAYQIFEKFTK
Sbjct: 721  EDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFEKFTK 780

Query: 781  NLGINPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAFTYNMLLAVHGKSGKIA 840
             LGI+PTLASYNCLIGELLEVR  EKAWD+FQDMKNV CAPD FTYNMLLAVHGKSGKI 
Sbjct: 781  KLGISPTLASYNCLIGELLEVRYTEKAWDLFQDMKNVGCAPDTFTYNMLLAVHGKSGKIT 840

Query: 841  ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPLI 900
            ELFELYKEMISRRCKPDAITYNI+ISSLAKSNNLDKALDF+YDLVS+DFRPTPRTYGPLI
Sbjct: 841  ELFELYKEMISRRCKPDAITYNIIISSLAKSNNLDKALDFFYDLVSNDFRPTPRTYGPLI 900

Query: 901  DGLAKVGRLEEAMWLFDEMSEYGCKPNCAIFNILINGYGKTGDTETACQLFKRMVNEGIR 960
            DGLAKVGRLEEAMWLF+EMS+YGCKPNCAIFNILINGYGK GDTETACQLFKRMVNEGIR
Sbjct: 901  DGLAKVGRLEEAMWLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIR 960

Query: 961  PDLKSYTILVDCLCLAGRVDEALYYFKELKLTGLDPDFIAYNRIINGLGKSQRMEEALAL 1020
            PDLKSYTILVDCLCLAGRVDEALYYF ELK TGLDPDFIAYNRIINGLGKSQRMEEALAL
Sbjct: 961  PDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALAL 1020

Query: 1021 YSEMRNRGIVPDLYTYNSLMLNLALAGMVEQAKRMYEDLQLAGLEPDVFTYNALIRGYSM 1080
            Y+EMRNRGIVPDLYTYNSLMLNL LAGMVEQAK+MYE+LQLAGLEPDVFTYNALIRGYSM
Sbjct: 1021 YNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKKMYEELQLAGLEPDVFTYNALIRGYSM 1080

Query: 1081 SGNPEHAYTVYKNMMVGGCNPNV 1104
            S NPEHAYTVYKNMMV GCNPN+
Sbjct: 1081 SENPEHAYTVYKNMMVDGCNPNI 1103

[Close]

BLAST of CcUC05G098030 vs. NCBI nr
Match: KAA0064575.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK20015.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 2083.5 bits (5397), Expect = 0.0e+00
Identity = 1016/1093 (92.96%), Postives = 1057/1093 (96.71%), Query Frame = 0


Query: 11   MFSTCCNGAFSECQIYVPSCNGLSRGMIWENLGDFQTPTLSMANWKKHRKKRKEFCRLAM 70
            MF TCCNGAFSECQIYV SCN  SRG+IWE+LGDFQT TLSM NWKKHRKKRK+FCRLA+
Sbjct: 1    MFGTCCNGAFSECQIYVSSCNRSSRGLIWESLGDFQTATLSMVNWKKHRKKRKDFCRLAL 60

Query: 71   QNPEQVMVVKGKTTIPVSEDEILRVLKSMTDPTRALSYFYSVSEFPSVLHTTETCNFMLE 130
            QNPEQVMVVKGKT I VSEDE+L VLKSMTDP RALSYFYS+SEFP+VLHTTETCNFMLE
Sbjct: 61   QNPEQVMVVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLE 120

Query: 131  FLRVHERVEDMAAIFELMQKKIIRRDLNTYLTIFKALSIRGGLRQVMIALEKMRRAGYVL 190
            FLRVH++VEDMAA+F+LMQKKIIRRDLNTYLTIFKALSIRGGLRQ+   L KMRRAG+VL
Sbjct: 121  FLRVHDKVEDMAAVFDLMQKKIIRRDLNTYLTIFKALSIRGGLRQMTTVLNKMRRAGFVL 180

Query: 191  NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSETVMVLL 250
            NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSETV+VLL
Sbjct: 181  NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSETVIVLL 240

Query: 251  KEMESLGLRPNVYTFTICIRVLGRAGKIDKAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310
            KEME LGLRPNVYTFTICIRVLGRAGKID+AYEIFRRMDDEGCGPDLVTYTVLIDALCNA
Sbjct: 241  KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 300

Query: 311  GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQMEADGYMPDVVTF 370
            GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT KEFW+QMEADGYMPDVVTF
Sbjct: 301  GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWNQMEADGYMPDVVTF 360

Query: 371  TILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNALICGLLRAGRIEDALKLLDTMES 430
            TILVDALCKAGDF EAFATFDVMRKQGILPNLHTYN+LICGLLRAGRIEDALKLLDTMES
Sbjct: 361  TILVDALCKAGDFVEAFATFDVMRKQGILPNLHTYNSLICGLLRAGRIEDALKLLDTMES 420

Query: 431  LGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAEMGRLRE 490
            +GV+PTAYTYIIFIDYFGKSGDTGKAVETFEKMKA+GIVPNIVACNASLYSLAEMGRLRE
Sbjct: 421  VGVRPTAYTYIIFIDYFGKSGDTGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLRE 480

Query: 491  AKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550
            AK MFNGLRE GL+PDSVTYNMMMKCYS+VGQVDEAVNLLSEMIRNGCEPDVIVVNSLID
Sbjct: 481  AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 540

Query: 551  SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMINQRCSP 610
            SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI QRCSP
Sbjct: 541  SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEQRCSP 600

Query: 611  NTISFNTLLDCFCKNDEVELALKMFSKMTVMGCKPDVLTYNTVIYGLIKENKVNYAFWFF 670
            NTISFNTLLDCFCKNDEVELALKMFSKMTVM CKPDVLTYNTVIYGLIKENKVN+AFWFF
Sbjct: 601  NTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFF 660

Query: 671  HQLKKSVYPDHVTICTLLPGIVKCGRIGDAIKIAKDFMYQVQFRVNRSFWEDLMGGTLVE 730
            HQLKKS++PDHVTICTLLPG+VKCGRIGDAIKIA+DFMYQV+FRVNRSFWEDLMGGTLVE
Sbjct: 661  HQLKKSIHPDHVTICTLLPGLVKCGRIGDAIKIARDFMYQVRFRVNRSFWEDLMGGTLVE 720

Query: 731  AEMDNAILFAEELVLNAICREDSFLIPLVRVLCRHKRALYAYQIFEKFTKNLGINPTLAS 790
            AEMD AI+FAEELVLN ICREDSFLIPLVRVLC+HKR LYAYQIFEKFTK LGI+PTLAS
Sbjct: 721  AEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFEKFTKKLGISPTLAS 780

Query: 791  YNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAFTYNMLLAVHGKSGKIAELFELYKEMI 850
            YNCLIGELLEVR  EKAWD+FQDMKNV CAPD FTYNMLLAVHGKSGKI ELFELYKEMI
Sbjct: 781  YNCLIGELLEVRYTEKAWDLFQDMKNVGCAPDTFTYNMLLAVHGKSGKITELFELYKEMI 840

Query: 851  SRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPLIDGLAKVGRLE 910
            SRRCKPDAITYNI+ISSLAKSNNLDKALDF+YDLVS+DFRPTPRTYGPLIDGLAKVGRLE
Sbjct: 841  SRRCKPDAITYNIIISSLAKSNNLDKALDFFYDLVSNDFRPTPRTYGPLIDGLAKVGRLE 900

Query: 911  EAMWLFDEMSEYGCKPNCAIFNILINGYGKTGDTETACQLFKRMVNEGIRPDLKSYTILV 970
            EAMWLF+EMS+YGCKPNCAIFNILINGYGK GDTETACQLFKRMVNEGIRPDLKSYTILV
Sbjct: 901  EAMWLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILV 960

Query: 971  DCLCLAGRVDEALYYFKELKLTGLDPDFIAYNRIINGLGKSQRMEEALALYSEMRNRGIV 1030
            DCLCLAGRVDEALYYF ELK TGLDPDFIAYNRIINGLGKSQRMEEALALY+EMRNRGIV
Sbjct: 961  DCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIV 1020

Query: 1031 PDLYTYNSLMLNLALAGMVEQAKRMYEDLQLAGLEPDVFTYNALIRGYSMSGNPEHAYTV 1090
            PDLYTYNSLMLNL LAGMVEQAK+MYE+LQLAGLEPDVFTYNALIRGYSMS NPEHAYTV
Sbjct: 1021 PDLYTYNSLMLNLGLAGMVEQAKKMYEELQLAGLEPDVFTYNALIRGYSMSENPEHAYTV 1080

Query: 1091 YKNMMVGGCNPNV 1104
            YKNMMV GCNPN+
Sbjct: 1081 YKNMMVDGCNPNI 1093

[Close]

BLAST of CcUC05G098030 vs. NCBI nr
Match: XP_004145582.3 (pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Cucumis sativus])

HSP 1 Score: 2073.1 bits (5370), Expect = 0.0e+00
Identity = 1014/1103 (91.93%), Postives = 1060/1103 (96.10%), Query Frame = 0


Query: 1    MSLVILSSLSMFSTCCNGAFSECQIYVPSCNGLSRGMIWENLGDFQTPTLSMANWKKHRK 60
            MSLVI++SLSMF TCCNGAFSECQ+YV SCN  SRG+IWE+LGDFQT TLSM NWKKHRK
Sbjct: 1    MSLVIVTSLSMFGTCCNGAFSECQVYVSSCNRSSRGLIWESLGDFQTATLSMVNWKKHRK 60

Query: 61   KRKEFCRLAMQNPEQVMVVKGKTTIPVSEDEILRVLKSMTDPTRALSYFYSVSEFPSVLH 120
            KRK+FCRLA+QNPEQVMVVKGKT I VSEDE+L VLKSMTDP RALSYFYS+SEFP+VLH
Sbjct: 61   KRKDFCRLALQNPEQVMVVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLH 120

Query: 121  TTETCNFMLEFLRVHERVEDMAAIFELMQKKIIRRDLNTYLTIFKALSIRGGLRQVMIAL 180
            TTETCNFMLEFLRVH++VEDMAA+FE MQKKIIRRDL+TYLTIFKALSIRGGLRQ+   L
Sbjct: 121  TTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVL 180

Query: 181  EKMRRAGYVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK 240
             KMR+AG+VLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK
Sbjct: 181  NKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK 240

Query: 241  RDSETVMVLLKEMESLGLRPNVYTFTICIRVLGRAGKIDKAYEIFRRMDDEGCGPDLVTY 300
            RDSE VMVLLKEME LGLRPNVYTFTICIRVLGRAGKID+AYEIFRRMDDEGCGPDLVTY
Sbjct: 241  RDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTY 300

Query: 301  TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQMEA 360
            TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT KEFWSQMEA
Sbjct: 301  TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEA 360

Query: 361  DGYMPDVVTFTILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNALICGLLRAGRIED 420
            DGYMPDVVTFTILVD LCKA DFDEAFATFDVMRKQGILPNLHTYN LICGLLRAGRIED
Sbjct: 361  DGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIED 420

Query: 421  ALKLLDTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLY 480
            ALKLLDTMES+GVQPTAYTYI FIDYFGKSG+TGKAVETFEKMKA+GIVPNIVACNASLY
Sbjct: 421  ALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLY 480

Query: 481  SLAEMGRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEAVNLLSEMIRNGCEP 540
            SLAEMGRLREAK MFNGLRE GL+PDSVTYNMMMKCYS+VGQVDEAVNLLSEMIRNGCEP
Sbjct: 481  SLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 541  DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600
            DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF
Sbjct: 541  DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600

Query: 601  ESMINQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMGCKPDVLTYNTVIYGLIKE 660
            ESMI ++CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVM CKPDVLTYNTVIYGLIKE
Sbjct: 601  ESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660

Query: 661  NKVNYAFWFFHQLKKSVYPDHVTICTLLPGIVKCGRIGDAIKIAKDFMYQVQFRVNRSFW 720
            NKVN+AFWFFHQLKKS++PDHVTICTLLPG+VKCG+IGDAI IA+DFMYQV+FRVNRSFW
Sbjct: 661  NKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFW 720

Query: 721  EDLMGGTLVEAEMDNAILFAEELVLNAICREDSFLIPLVRVLCRHKRALYAYQIFEKFTK 780
            EDLMGGTLVEAEMD AI+FAEELVLN ICREDSFLIPLVRVLC+HKR LYAYQIF+KFTK
Sbjct: 721  EDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTK 780

Query: 781  NLGINPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAFTYNMLLAVHGKSGKIA 840
             LGI+PTLASYNCLIGELLEV   EKAWD+F+DMKNV CAPDAFT+NMLLAVHGKSGKI 
Sbjct: 781  KLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKIT 840

Query: 841  ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPLI 900
            ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDF+YDLVSSDFRPTPRTYGPLI
Sbjct: 841  ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLI 900

Query: 901  DGLAKVGRLEEAMWLFDEMSEYGCKPNCAIFNILINGYGKTGDTETACQLFKRMVNEGIR 960
            DGLAKVGRLEEAM LF+EMS+YGCKPNCAIFNILINGYGK GDTETACQLFKRMVNEGIR
Sbjct: 901  DGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIR 960

Query: 961  PDLKSYTILVDCLCLAGRVDEALYYFKELKLTGLDPDFIAYNRIINGLGKSQRMEEALAL 1020
            PDLKSYTILVDCLCLAGRVDEALYYF ELK TGLDPDFIAYNRIINGLGKSQRMEEALAL
Sbjct: 961  PDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALAL 1020

Query: 1021 YSEMRNRGIVPDLYTYNSLMLNLALAGMVEQAKRMYEDLQLAGLEPDVFTYNALIRGYSM 1080
            Y+EMRNRGIVPDLYTYNSLMLNL LAGMVEQAKRMYE+LQLAGLEPDVFTYNALIRGYS+
Sbjct: 1021 YNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSL 1080

Query: 1081 SGNPEHAYTVYKNMMVGGCNPNV 1104
            S NPEHAYTVYKNMMV GCNPN+
Sbjct: 1081 SENPEHAYTVYKNMMVDGCNPNI 1103

[Close]

BLAST of CcUC05G098030 vs. NCBI nr
Match: XP_016901317.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g31850, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 2011.1 bits (5209), Expect = 0.0e+00
Identity = 991/1103 (89.85%), Postives = 1032/1103 (93.56%), Query Frame = 0


Query: 1    MSLVILSSLSMFSTCCNGAFSECQIYVPSCNGLSRGMIWENLGDFQTPTLSMANWKKHRK 60
            MSLVI++SLSMF TCCNGAFSECQIYV SCN  SRG+IWE+LGDFQT TLSM NWKKHRK
Sbjct: 1    MSLVIVTSLSMFGTCCNGAFSECQIYVSSCNRSSRGLIWESLGDFQTATLSMVNWKKHRK 60

Query: 61   KRKEFCRLAMQNPEQVMVVKGKTTIPVSEDEILRVLKSMTDPTRALSYFYSVSEFPSVLH 120
            KRK+FCRLA+QNPEQVMVVKGKT I VSEDE+L VLKSMTDP RALSYFYS+SEFP+VLH
Sbjct: 61   KRKDFCRLALQNPEQVMVVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLH 120

Query: 121  TTETCNFMLEFLRVHERVEDMAAIFELMQKKIIRRDLNTYLTIFKALSIRGGLRQVMIAL 180
            TTETCNFMLEFLRVH++VEDMAA+F+LMQKKIIRRDLNTYLTIFKALSIRGGLRQ+   L
Sbjct: 121  TTETCNFMLEFLRVHDKVEDMAAVFDLMQKKIIRRDLNTYLTIFKALSIRGGLRQMTTVL 180

Query: 181  EKMRRAGYVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK 240
             KMRRAG+VLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK
Sbjct: 181  NKMRRAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK 240

Query: 241  RDSETVMVLLKEMESLGLRPNVYTFTICIRVLGRAGKIDKAYEIFRRMDDEGCGPDLVTY 300
            RDSETV+VLLKEME LGLRPNVYTFTICIRVLGRAGKID+AYEIFRRMDDEGCGPDLVTY
Sbjct: 241  RDSETVIVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTY 300

Query: 301  TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQMEA 360
            TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT KEFW+QMEA
Sbjct: 301  TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWNQMEA 360

Query: 361  DGYMPDVVTFTILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNALICGLLRAGRIED 420
            DGYMPDVVTFTILVDALCKAGDF EAFATFDVMRKQ                        
Sbjct: 361  DGYMPDVVTFTILVDALCKAGDFVEAFATFDVMRKQ------------------------ 420

Query: 421  ALKLLDTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLY 480
                       GV+PTAYTYIIFIDYFGKSGDTGKAVETFEKMKA+GIVPNIVACNASLY
Sbjct: 421  -----------GVRPTAYTYIIFIDYFGKSGDTGKAVETFEKMKAKGIVPNIVACNASLY 480

Query: 481  SLAEMGRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEAVNLLSEMIRNGCEP 540
            SLAEMGRLREAK MFNGLRE GL+PDSVTYNMMMKCYS+VGQVDEAVNLLSEMIRNGCEP
Sbjct: 481  SLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 541  DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600
            DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF
Sbjct: 541  DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600

Query: 601  ESMINQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMGCKPDVLTYNTVIYGLIKE 660
            ESMI QRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVM CKPDVLTYNTVIYGLIKE
Sbjct: 601  ESMIEQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660

Query: 661  NKVNYAFWFFHQLKKSVYPDHVTICTLLPGIVKCGRIGDAIKIAKDFMYQVQFRVNRSFW 720
            NKVN+AFWFFHQLKKS++PDHVTICTLLPG+VKCGRIGDAIKIA+DFMYQV+FRVNRSFW
Sbjct: 661  NKVNHAFWFFHQLKKSIHPDHVTICTLLPGLVKCGRIGDAIKIARDFMYQVRFRVNRSFW 720

Query: 721  EDLMGGTLVEAEMDNAILFAEELVLNAICREDSFLIPLVRVLCRHKRALYAYQIFEKFTK 780
            EDLMGGTLVEAEMD AI+FAEELVLN ICREDSFLIPLVRVLC+HKR LYAYQIFEKFTK
Sbjct: 721  EDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFEKFTK 780

Query: 781  NLGINPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAFTYNMLLAVHGKSGKIA 840
             LGI+PTLASYNCLIGELLEVR  EKAWD+FQDMKNV CAPD FTYNMLLAVHGKSGKI 
Sbjct: 781  KLGISPTLASYNCLIGELLEVRYTEKAWDLFQDMKNVGCAPDTFTYNMLLAVHGKSGKIT 840

Query: 841  ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPLI 900
            ELFELYKEMISRRCKPDAITYNI+ISSLAKSNNLDKALDF+YDLVS+DFRPTPRTYGPLI
Sbjct: 841  ELFELYKEMISRRCKPDAITYNIIISSLAKSNNLDKALDFFYDLVSNDFRPTPRTYGPLI 900

Query: 901  DGLAKVGRLEEAMWLFDEMSEYGCKPNCAIFNILINGYGKTGDTETACQLFKRMVNEGIR 960
            DGLAKVGRLEEAMWLF+EMS+YGCKPNCAIFNILINGYGK GDTETACQLFKRMVNEGIR
Sbjct: 901  DGLAKVGRLEEAMWLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIR 960

Query: 961  PDLKSYTILVDCLCLAGRVDEALYYFKELKLTGLDPDFIAYNRIINGLGKSQRMEEALAL 1020
            PDLKSYTILVDCLCLAGRVDEALYYF ELK TGLDPDFIAYNRIINGLGKSQRMEEALAL
Sbjct: 961  PDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALAL 1020

Query: 1021 YSEMRNRGIVPDLYTYNSLMLNLALAGMVEQAKRMYEDLQLAGLEPDVFTYNALIRGYSM 1080
            Y+EMRNRGIVPDLYTYNSLMLNL LAGMVEQAK+MYE+LQLAGLEPDVFTYNALIRGYSM
Sbjct: 1021 YNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKKMYEELQLAGLEPDVFTYNALIRGYSM 1068

Query: 1081 SGNPEHAYTVYKNMMVGGCNPNV 1104
            S NPEHAYTVYKNMMV GCNPN+
Sbjct: 1081 SENPEHAYTVYKNMMVDGCNPNI 1068

[Close]

BLAST of CcUC05G098030 vs. ExPASy Swiss-Prot
Match: Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)

HSP 1 Score: 1421.4 bits (3678), Expect = 0.0e+00
Identity = 692/1066 (64.92%), Postives = 845/1066 (79.27%), Query Frame = 0


Query: 43   GDFQTPTLSMANWKKHRKKRKEFCRLAMQNPEQV---MVVKGKTTIPVSEDEILRVLKSM 102
            G  +   L + + KKH +++   C +           M+ K       S +E+ R LKS 
Sbjct: 36   GGLKFHALKIGSRKKHWRRKSMRCSVVSMKSSDFSGSMIRKSSKPDLSSSEEVTRGLKSF 95

Query: 103  TDPTRALSYFYSVSEFPSVLHTTETCNFMLEFLRVHERVEDMAAIFELMQKKIIRRDLNT 162
             D   + SYF SV+   +++HTTETCN+MLE LRV  ++E+MA +F+LMQK+II+RD NT
Sbjct: 96   PDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNT 155

Query: 163  YLTIFKALSIRGGLRQVMIALEKMRRAGYVLNAYSYNGLIHLLIQSGFCGEALEVYRRMV 222
            YLTIFK+LS++GGL+Q   AL KMR  G+VLNAYSYNGLIHLL++S FC EA+EVYRRM+
Sbjct: 156  YLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI 215

Query: 223  SEGLKPSLKTYSALMVALGKKRDSETVMVLLKEMESLGLRPNVYTFTICIRVLGRAGKID 282
             EG +PSL+TYS+LMV LGK+RD ++VM LLKEME+LGL+PNVYTFTICIRVLGRAGKI+
Sbjct: 216  LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275

Query: 283  KAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLL 342
            +AYEI +RMDDEGCGPD+VTYTVLIDALC A +L+ AKE+F KMK   HKPD+V YITLL
Sbjct: 276  EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335

Query: 343  DKFNDFGDLDTVKEFWSQMEADGYMPDVVTFTILVDALCKAGDFDEAFATFDVMRKQGIL 402
            D+F+D  DLD+VK+FWS+ME DG++PDVVTFTILVDALCKAG+F EAF T DVMR QGIL
Sbjct: 336  DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395

Query: 403  PNLHTYNALICGLLRAGRIEDALKLLDTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVET 462
            PNLHTYN LICGLLR  R++DAL+L   MESLGV+PTAYTYI+FIDY+GKSGD+  A+ET
Sbjct: 396  PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455

Query: 463  FEKMKARGIVPNIVACNASLYSLAEMGRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSR 522
            FEKMK +GI PNIVACNASLYSLA+ GR REAK +F GL++IGL PDSVTYNMMMKCYS+
Sbjct: 456  FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515

Query: 523  VGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVT 582
            VG++DEA+ LLSEM+ NGCEPDVIVVNSLI++LYKA RVDEAW+MF RMK+MKL PTVVT
Sbjct: 516  VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575

Query: 583  YNTLLSGLGKEGRVQKAIELFESMINQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMT 642
            YNTLL+GLGK G++Q+AIELFE M+ + C PNTI+FNTL DC CKNDEV LALKM  KM 
Sbjct: 576  YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635

Query: 643  VMGCKPDVLTYNTVIYGLIKENKVNYAFWFFHQLKKSVYPDHVTICTLLPGIVKCGRIGD 702
             MGC PDV TYNT+I+GL+K  +V  A  FFHQ+KK VYPD VT+CTLLPG+VK   I D
Sbjct: 636  DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIED 695

Query: 703  AIKIAKDFMYQVQFRVNRSFWEDLMGGTLVEAEMDNAILFAEELVLNAICRE-DSFLIPL 762
            A KI  +F+Y    +    FWEDL+G  L EA +DNA+ F+E LV N ICR+ DS L+P+
Sbjct: 696  AYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755

Query: 763  VRVLCRHKRALYAYQIFEKFTKNLGINPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVA 822
            +R  C+H     A  +FEKFTK+LG+ P L +YN LIG LLE   IE A DVF  +K+  
Sbjct: 756  IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815

Query: 823  CAPDAFTYNMLLAVHGKSGKIAELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKAL 882
            C PD  TYN LL  +GKSGKI ELFELYKEM +  C+ + IT+NIVIS L K+ N+D AL
Sbjct: 816  CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875

Query: 883  DFYYDLVSS-DFRPTPRTYGPLIDGLAKVGRLEEAMWLFDEMSEYGCKPNCAIFNILING 942
            D YYDL+S  DF PT  TYGPLIDGL+K GRL EA  LF+ M +YGC+PNCAI+NILING
Sbjct: 876  DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935

Query: 943  YGKTGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFKELKLTGLDPD 1002
            +GK G+ + AC LFKRMV EG+RPDLK+Y++LVDCLC+ GRVDE L+YFKELK +GL+PD
Sbjct: 936  FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995

Query: 1003 FIAYNRIINGLGKSQRMEEALALYSEMR-NRGIVPDLYTYNSLMLNLALAGMVEQAKRMY 1062
             + YN IINGLGKS R+EEAL L++EM+ +RGI PDLYTYNSL+LNL +AGMVE+A ++Y
Sbjct: 996  VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055

Query: 1063 EDLQLAGLEPDVFTYNALIRGYSMSGNPEHAYTVYKNMMVGGCNPN 1103
             ++Q AGLEP+VFT+NALIRGYS+SG PEHAY VY+ M+ GG +PN
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101

[Close]

BLAST of CcUC05G098030 vs. ExPASy Swiss-Prot
Match: Q9M907 (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX=3702 GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 4.9e-96
Identity = 212/750 (28.27%), Postives = 367/750 (48.93%), Query Frame = 0


Query: 347  DLDTVKEFWSQMEADGYMPDVVTFTILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYN 406
            + D + +   +M   G+ P V T   +V    KA    E +    +MRK    P    Y 
Sbjct: 113  NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYT 172

Query: 407  ALICGLLRAGRIEDALKLLDTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKAR 466
             LI         +  L L   M+ LG +PT + +   I  F K G    A+   ++MK+ 
Sbjct: 173  TLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS 232

Query: 467  GIVPNIVACNASLYSLAEMGRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEA 526
             +  +IV  N  + S  ++G++  A   F+ +   GL PD VTY  M+    +  ++DEA
Sbjct: 233  SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292

Query: 527  VNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSG 586
            V +   + +N   P     N++I     AG+ DEA+ + +R +     P+V+ YN +L+ 
Sbjct: 293  VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352

Query: 587  LGKEGRVQKAIELFESMINQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMGCKPD 646
            L K G+V +A+++FE M  +  +PN  ++N L+D  C+  +++ A ++   M   G  P+
Sbjct: 353  LRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN 412

Query: 647  VLTYNTVIYGLIKENKVNYAFWFFHQLK-KSVYPDHVTICTLLPGIVKCGRIGDAIKIAK 706
            V T N ++  L K  K++ A   F ++  K   PD +T C+L+ G+ K GR+ DA K+  
Sbjct: 413  VRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV-- 472

Query: 707  DFMYQVQFRVNRSFWEDLMGGTLVEAEMDNAILFAEELVLNAICREDSFL-IPLVRVLCR 766
                                                E +L++ CR +S +   L++    
Sbjct: 473  -----------------------------------YEKMLDSDCRTNSIVYTSLIKNFFN 532

Query: 767  HKRALYAYQIFEKFTKNLGINPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAF 826
            H R    ++I++    N   +P L   N  +  + +    EK   +F+++K     PDA 
Sbjct: 533  HGRKEDGHKIYKDMI-NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 592

Query: 827  TYNMLLAVHG--KSGKIAELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFYY 886
            +Y++L  +HG  K+G   E +EL+  M  + C  D   YNIVI    K   ++KA     
Sbjct: 593  SYSIL--IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 652

Query: 887  DLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMWLFDEMSEYGCKPNCAIFNILINGYGKTG 946
            ++ +  F PT  TYG +IDGLAK+ RL+EA  LF+E      + N  I++ LI+G+GK G
Sbjct: 653  EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 712

Query: 947  DTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFKELKLTGLDPDFIAYN 1006
              + A  + + ++ +G+ P+L ++  L+D L  A  ++EAL  F+ +K     P+ + Y 
Sbjct: 713  RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 772

Query: 1007 RIINGLGKSQRMEEALALYSEMRNRGIVPDLYTYNSLMLNLALAGMVEQAKRMYEDLQLA 1066
             +INGL K ++  +A   + EM+ +G+ P   +Y +++  LA AG + +A  +++  +  
Sbjct: 773  ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 821

Query: 1067 GLEPDVFTYNALIRGYSMSGNPEHAYTVYK 1093
            G  PD   YNA+I G S       A+++++
Sbjct: 833  GGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821

[Close]

BLAST of CcUC05G098030 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 328.6 bits (841), Expect = 2.9e-88
Identity = 233/924 (25.22%), Postives = 418/924 (45.24%), Query Frame = 0


Query: 124  TCNFML-EFLRVHERVEDMAAIFELMQKKIIRRDLNTYLTIFKALSIRGGLRQVMIALEK 183
            TCN +L   ++  E V   + + E++++KI   D+ T+  +   L   G   +    ++K
Sbjct: 160  TCNAILGSVVKSGEDVSVWSFLKEMLKRKIC-PDVATFNILINVLCAEGSFEKSSYLMQK 219

Query: 184  MRRAGYVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRD 243
            M ++GY     +YN ++H   + G    A+E+   M S+G+   + TY+ L+  L +   
Sbjct: 220  MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 279

Query: 244  SETVMVLLKEMESLGLRPNVYTFTICIRVLGRAGKIDKAYEIFRRMDDEGCGPDLVTYTV 303
                 +LL++M    + PN  T+   I      GK+  A ++   M   G  P+ VT+  
Sbjct: 280  IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 339

Query: 304  LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQMEADG 363
            LID   + G  + A ++F  M+A G  P +V Y  LLD      + D  + F+ +M+ +G
Sbjct: 340  LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 399

Query: 364  YMPDVVTFTILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNALICGLLRAGRIEDAL 423
                 +T+T ++D LCK G  DEA    + M K GI P++ TY+ALI G  + GR + A 
Sbjct: 400  VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAK 459

Query: 424  KLLDTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSL 483
            +++  +  +G+ P    Y   I    + G   +A+  +E M   G   +    N  + SL
Sbjct: 460  EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 519

Query: 484  AEMGRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEAVNLLSEMIRNGCEPDV 543
             + G++ EA+     +   G+ P++V+++ ++  Y   G+  +A ++  EM + G  P  
Sbjct: 520  CKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTF 579

Query: 544  IVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 603
                SL+  L K G + EA +    +  +  +   V YNTLL+ + K G + KA+ LF  
Sbjct: 580  FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGE 639

Query: 604  MINQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMG-CKPDVLTYNTVIYGLIKEN 663
            M+ +   P++ ++ +L+   C+  +  +A+    +    G   P+ + Y   + G+ K  
Sbjct: 640  MVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAG 699

Query: 664  KVNYAFWFFHQLKKSVY-PDHVTICTLLPGIVKCGRIGDAIKIAKDFMYQVQFRVNRSFW 723
            +     +F  Q+    + PD VT   ++ G  + G+I     +  + M       N + +
Sbjct: 700  QWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE-MGNQNGGPNLTTY 759

Query: 724  EDLMGGTLVEAEMDNAILFAEELVLNAICREDSFLIPLVRVLCRHKRALYAYQIFEKFTK 783
              L+ G     ++  + L    ++LN I  +      LV  +C         +I + F  
Sbjct: 760  NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF-- 819

Query: 784  NLGINPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAFTYNMLLAVHGKSGKIA 843
                          I   +EV                    D +T+NML++    +G+I 
Sbjct: 820  --------------ICRGVEV--------------------DRYTFNMLISKCCANGEIN 879

Query: 844  ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPLI 903
              F+L K M S     D  T + ++S L +++   ++    +++      P  R Y  LI
Sbjct: 880  WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 939

Query: 904  DGLAKVGRLEEAMWLFDEMSEYG-CKPNCAIFNILINGYGKTGDTETACQLFKRMVNEGI 963
            +GL +VG ++ A  + +EM  +  C PN A  + ++    K G  + A  L + M+   +
Sbjct: 940  NGLCRVGDIKTAFVVKEEMIAHKICPPNVA-ESAMVRALAKCGKADEATLLLRFMLKMKL 999

Query: 964  RPDLKSYTILVDCLCLAGRVDEALYYFKELKLTGLDPDFIAYNRIINGLGKSQRMEEALA 1023
             P + S+T L+   C  G V EAL     +   GL  D ++YN +I GL     M  A  
Sbjct: 1000 VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFE 1044

Query: 1024 LYSEMRNRGIVPDLYTYNSLMLNL 1044
            LY EM+  G + +  TY +L+  L
Sbjct: 1060 LYEEMKGDGFLANATTYKALIRGL 1044

[Close]

BLAST of CcUC05G098030 vs. ExPASy Swiss-Prot
Match: Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 4.9e-88
Identity = 223/859 (25.96%), Postives = 407/859 (47.38%), Query Frame = 0


Query: 187  GYVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSETV 246
            G+  +  S+  LIH L+++     A  + + ++   LKP                 S+  
Sbjct: 99   GFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKP-----------------SDVF 158

Query: 247  MVLLKEMESLGLRPNVYTFTICIRVLGRAGKIDKAYEIFRRMDDE-GCGPDLVTYTVLID 306
             VL    E   L  +  +F + I+   R+ ++     +F+ M  +    P++ T + L+ 
Sbjct: 159  NVLFSCYEKCKLSSS-SSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLH 218

Query: 307  ALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQMEADGYMP 366
             L        A ELF  M + G +PD  IY  ++    +  DL   KE  + MEA G   
Sbjct: 219  GLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDV 278

Query: 367  DVVTFTILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNALICGLLRAGRIEDALKLL 426
            ++V + +L+D LCK     EA      +  + + P++ TY  L+ GL +    E  L+++
Sbjct: 279  NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 338

Query: 427  DTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAEM 486
            D M  L   P+       ++   K G   +A+   +++   G+ PN+   NA + SL + 
Sbjct: 339  DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 398

Query: 487  GRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEAVNLLSEMIRNGCEPDVIVV 546
             +  EA+ +F+ + +IGL P+ VTY++++  + R G++D A++ L EM+  G +  V   
Sbjct: 399  RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 458

Query: 547  NSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIN 606
            NSLI+   K G +  A      M + KL PTVVTY +L+ G   +G++ KA+ L+  M  
Sbjct: 459  NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 518

Query: 607  QRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMGCKPDVLTYNTVIYGLIKENKVNY 666
            +  +P+  +F TLL    +   +  A+K+F++M     KP+ +TYN +I G  +E  ++ 
Sbjct: 519  KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 578

Query: 667  AFWFFHQL-KKSVYPDHVTICTLLPGIVKCGRIGDAIKIAKDFMYQVQFRVNRSFWEDLM 726
            AF F  ++ +K + PD  +   L+ G+   G+  +A K+  D +++    +N   +  L+
Sbjct: 579  AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLL 638

Query: 727  GGTLVEAEMDNAILFAEELVLNAICREDSFLIPLVRVLCRHKRALYAYQIFEKFTKNLGI 786
             G   E +++ A+   +E+V                                      G+
Sbjct: 639  HGFCREGKLEEALSVCQEMV------------------------------------QRGV 698

Query: 787  NPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAFTYNMLLAVHGKSGKIAELFE 846
            +  L  Y  LI   L+ +  +  + + ++M +    PD   Y  ++    K+G   E F 
Sbjct: 699  DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 758

Query: 847  LYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPLIDGLA 906
            ++  MI+  C P+ +TY  VI+ L K+  +++A      +      P   TYG  +D L 
Sbjct: 759  IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 818

Query: 907  K-VGRLEEAMWLFDEMSEYGCKPNCAIFNILINGYGKTGDTETACQLFKRMVNEGIRPDL 966
            K    +++A+ L + + + G   N A +N+LI G+ + G  E A +L  RM+ +G+ PD 
Sbjct: 819  KGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 878

Query: 967  KSYTILVDCLCLAGRVDEALYYFKELKLTGLDPDFIAYNRIINGLGKSQRMEEALALYSE 1026
             +YT +++ LC    V +A+  +  +   G+ PD +AYN +I+G   +  M +A  L +E
Sbjct: 879  ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 901

Query: 1027 MRNRGIVPDLYTYNSLMLN 1043
            M  +G++P+  T  +   N
Sbjct: 939  MLRQGLIPNNKTSRTTTSN 901

[Close]

BLAST of CcUC05G098030 vs. ExPASy Swiss-Prot
Match: Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.9e-79
Identity = 216/813 (26.57%), Postives = 352/813 (43.30%), Query Frame = 0


Query: 282  YEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDK 341
            Y    R   +   PDL TY +LI   C AG+L+                           
Sbjct: 72   YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLG------------------------- 131

Query: 342  FNDFGDLDTVKEFWSQMEADGYMPDVVTFTILVDALCKAGDFDEAF-ATFDVMRKQGILP 401
               F  L  V +        G+  D + FT L+  LC      +A       M + G +P
Sbjct: 132  ---FAALGNVIK-------KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIP 191

Query: 402  NLHTYNALICGLLRAGRIEDALKLLDTM---ESLGVQPTAYTYIIFIDYFGKSGDTGKAV 461
            N+ +YN L+ GL    R ++AL+LL  M      G  P   +Y   I+ F K GD+ KA 
Sbjct: 192  NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY 251

Query: 462  ETFEKMKARGIVPNIVACNASLYSLAEMGRLREAKNMFNGLREIGLSPDSVTYNMMMKCY 521
             T+ +M  RGI+P++V  N+ + +L +   + +A  + N + + G+ PD +TYN ++  Y
Sbjct: 252  STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 311

Query: 522  SRVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTV 581
               GQ  EA+  L +M  +G EPDV+  + L+D L K GR  EA ++FD M    L P +
Sbjct: 312  CSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 371

Query: 582  VTYNTLLSGLGKEGRVQKAIELFESMINQRCSPNTISFNTLLDCFCKNDEVELALKMFSK 641
             TY TLL G   +G + +   L + M+     P+   F+ L+  + K  +V+ A+ +FSK
Sbjct: 372  TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSK 431

Query: 642  MTVMGCKPDVLTYNTVIYGLIKENKVNYAFWFFHQ-LKKSVYPDHVTICTLLPGIVKCGR 701
            M   G  P+ +TY  VI  L K  +V  A  +F Q + + + P ++   +L+ G+  C +
Sbjct: 432  MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 491

Query: 702  IGDAIKIAKDFMYQVQFRVNRSFWEDLMGGTLVEAEMDNAILFAEELVLNAICREDSFLI 761
                                   WE                  AEEL+L  + R      
Sbjct: 492  -----------------------WER-----------------AEELILEMLDR------ 551

Query: 762  PLVRVLCRHKRALYAYQIFEKFTKNLGINPTLASYNCLIGELLEVRCIEKAWDVFQDMKN 821
                                      GI        CL                      
Sbjct: 552  --------------------------GI--------CL---------------------- 611

Query: 822  VACAPDAFTYNMLLAVHGKSGKIAELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDK 881
                 +   +N ++  H K G++ E  +L++ M+    KP+ ITYN +I+    +  +D+
Sbjct: 612  -----NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDE 671

Query: 882  ALDFYYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMWLFDEMSEYGCKPNCAIFNILIN 941
            A+     +VS   +P   TY  LI+G  K+ R+E+A+ LF EM   G  P+   +NI++ 
Sbjct: 672  AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 731

Query: 942  GYGKTGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFKELKLTGLDP 1001
            G  +T  T  A +L+ R+   G + +L +Y I++  LC     D+AL  F+ L L  L  
Sbjct: 732  GLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKL 742

Query: 1002 DFIAYNRIINGLGKSQRMEEALALYSEMRNRGIVPDLYTYNSLMLNLALAGMVEQAKRMY 1061
            +   +N +I+ L K  R +EA  L+    + G+VP+ +TY  +  N+   G++E+  +++
Sbjct: 792  EARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 742

Query: 1062 EDLQLAGLEPDVFTYNALIRGYSMSGNPEHAYT 1090
              ++  G   D    N ++R     G    A T
Sbjct: 852  LSMEDNGCTVDSGMLNFIVRELLQRGEITRAGT 742

[Close]

BLAST of CcUC05G098030 vs. ExPASy TrEMBL
Match: A0A1S3BUU7 (pentatricopeptide repeat-containing protein At4g31850, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493741 PE=4 SV=1)

HSP 1 Score: 2095.5 bits (5428), Expect = 0.0e+00
Identity = 1024/1103 (92.84%), Postives = 1067/1103 (96.74%), Query Frame = 0


Query: 1    MSLVILSSLSMFSTCCNGAFSECQIYVPSCNGLSRGMIWENLGDFQTPTLSMANWKKHRK 60
            MSLVI++SLSMF TCCNGAFSECQIYV SCN  SRG+IWE+LGDFQT TLSM NWKKHRK
Sbjct: 1    MSLVIVTSLSMFGTCCNGAFSECQIYVSSCNRSSRGLIWESLGDFQTATLSMVNWKKHRK 60

Query: 61   KRKEFCRLAMQNPEQVMVVKGKTTIPVSEDEILRVLKSMTDPTRALSYFYSVSEFPSVLH 120
            KRK+FCRLA+QNPEQVMVVKGKT I VSEDE+L VLKSMTDP RALSYFYS+SEFP+VLH
Sbjct: 61   KRKDFCRLALQNPEQVMVVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLH 120

Query: 121  TTETCNFMLEFLRVHERVEDMAAIFELMQKKIIRRDLNTYLTIFKALSIRGGLRQVMIAL 180
            TTETCNFMLEFLRVH++VEDMAA+F+LMQKKIIRRDLNTYLTIFKALSIRGGLRQ+   L
Sbjct: 121  TTETCNFMLEFLRVHDKVEDMAAVFDLMQKKIIRRDLNTYLTIFKALSIRGGLRQMTTVL 180

Query: 181  EKMRRAGYVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK 240
             KMRRAG+VLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK
Sbjct: 181  NKMRRAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK 240

Query: 241  RDSETVMVLLKEMESLGLRPNVYTFTICIRVLGRAGKIDKAYEIFRRMDDEGCGPDLVTY 300
            RDSETV+VLLKEME LGLRPNVYTFTICIRVLGRAGKID+AYEIFRRMDDEGCGPDLVTY
Sbjct: 241  RDSETVIVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTY 300

Query: 301  TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQMEA 360
            TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT KEFW+QMEA
Sbjct: 301  TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWNQMEA 360

Query: 361  DGYMPDVVTFTILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNALICGLLRAGRIED 420
            DGYMPDVVTFTILVDALCKAGDF EAFATFDVMRKQGILPNLHTYN+LICGLLRAGRIED
Sbjct: 361  DGYMPDVVTFTILVDALCKAGDFVEAFATFDVMRKQGILPNLHTYNSLICGLLRAGRIED 420

Query: 421  ALKLLDTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLY 480
            ALKLLDTMES+GV+PTAYTYIIFIDYFGKSGDTGKAVETFEKMKA+GIVPNIVACNASLY
Sbjct: 421  ALKLLDTMESVGVRPTAYTYIIFIDYFGKSGDTGKAVETFEKMKAKGIVPNIVACNASLY 480

Query: 481  SLAEMGRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEAVNLLSEMIRNGCEP 540
            SLAEMGRLREAK MFNGLRE GL+PDSVTYNMMMKCYS+VGQVDEAVNLLSEMIRNGCEP
Sbjct: 481  SLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 541  DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600
            DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF
Sbjct: 541  DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600

Query: 601  ESMINQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMGCKPDVLTYNTVIYGLIKE 660
            ESMI QRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVM CKPDVLTYNTVIYGLIKE
Sbjct: 601  ESMIEQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660

Query: 661  NKVNYAFWFFHQLKKSVYPDHVTICTLLPGIVKCGRIGDAIKIAKDFMYQVQFRVNRSFW 720
            NKVN+AFWFFHQLKKS++PDHVTICTLLPG+VKCGRIGDAIKIA+DFMYQV+FRVNRSFW
Sbjct: 661  NKVNHAFWFFHQLKKSIHPDHVTICTLLPGLVKCGRIGDAIKIARDFMYQVRFRVNRSFW 720

Query: 721  EDLMGGTLVEAEMDNAILFAEELVLNAICREDSFLIPLVRVLCRHKRALYAYQIFEKFTK 780
            EDLMGGTLVEAEMD AI+FAEELVLN ICREDSFLIPLVRVLC+HKR LYAYQIFEKFTK
Sbjct: 721  EDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFEKFTK 780

Query: 781  NLGINPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAFTYNMLLAVHGKSGKIA 840
             LGI+PTLASYNCLIGELLEVR  EKAWD+FQDMKNV CAPD FTYNMLLAVHGKSGKI 
Sbjct: 781  KLGISPTLASYNCLIGELLEVRYTEKAWDLFQDMKNVGCAPDTFTYNMLLAVHGKSGKIT 840

Query: 841  ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPLI 900
            ELFELYKEMISRRCKPDAITYNI+ISSLAKSNNLDKALDF+YDLVS+DFRPTPRTYGPLI
Sbjct: 841  ELFELYKEMISRRCKPDAITYNIIISSLAKSNNLDKALDFFYDLVSNDFRPTPRTYGPLI 900

Query: 901  DGLAKVGRLEEAMWLFDEMSEYGCKPNCAIFNILINGYGKTGDTETACQLFKRMVNEGIR 960
            DGLAKVGRLEEAMWLF+EMS+YGCKPNCAIFNILINGYGK GDTETACQLFKRMVNEGIR
Sbjct: 901  DGLAKVGRLEEAMWLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIR 960

Query: 961  PDLKSYTILVDCLCLAGRVDEALYYFKELKLTGLDPDFIAYNRIINGLGKSQRMEEALAL 1020
            PDLKSYTILVDCLCLAGRVDEALYYF ELK TGLDPDFIAYNRIINGLGKSQRMEEALAL
Sbjct: 961  PDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALAL 1020

Query: 1021 YSEMRNRGIVPDLYTYNSLMLNLALAGMVEQAKRMYEDLQLAGLEPDVFTYNALIRGYSM 1080
            Y+EMRNRGIVPDLYTYNSLMLNL LAGMVEQAK+MYE+LQLAGLEPDVFTYNALIRGYSM
Sbjct: 1021 YNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKKMYEELQLAGLEPDVFTYNALIRGYSM 1080

Query: 1081 SGNPEHAYTVYKNMMVGGCNPNV 1104
            S NPEHAYTVYKNMMV GCNPN+
Sbjct: 1081 SENPEHAYTVYKNMMVDGCNPNI 1103

[Close]

BLAST of CcUC05G098030 vs. ExPASy TrEMBL
Match: A0A5D3D8X9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001330 PE=4 SV=1)

HSP 1 Score: 2083.5 bits (5397), Expect = 0.0e+00
Identity = 1016/1093 (92.96%), Postives = 1057/1093 (96.71%), Query Frame = 0


Query: 11   MFSTCCNGAFSECQIYVPSCNGLSRGMIWENLGDFQTPTLSMANWKKHRKKRKEFCRLAM 70
            MF TCCNGAFSECQIYV SCN  SRG+IWE+LGDFQT TLSM NWKKHRKKRK+FCRLA+
Sbjct: 1    MFGTCCNGAFSECQIYVSSCNRSSRGLIWESLGDFQTATLSMVNWKKHRKKRKDFCRLAL 60

Query: 71   QNPEQVMVVKGKTTIPVSEDEILRVLKSMTDPTRALSYFYSVSEFPSVLHTTETCNFMLE 130
            QNPEQVMVVKGKT I VSEDE+L VLKSMTDP RALSYFYS+SEFP+VLHTTETCNFMLE
Sbjct: 61   QNPEQVMVVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLE 120

Query: 131  FLRVHERVEDMAAIFELMQKKIIRRDLNTYLTIFKALSIRGGLRQVMIALEKMRRAGYVL 190
            FLRVH++VEDMAA+F+LMQKKIIRRDLNTYLTIFKALSIRGGLRQ+   L KMRRAG+VL
Sbjct: 121  FLRVHDKVEDMAAVFDLMQKKIIRRDLNTYLTIFKALSIRGGLRQMTTVLNKMRRAGFVL 180

Query: 191  NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSETVMVLL 250
            NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSETV+VLL
Sbjct: 181  NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSETVIVLL 240

Query: 251  KEMESLGLRPNVYTFTICIRVLGRAGKIDKAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310
            KEME LGLRPNVYTFTICIRVLGRAGKID+AYEIFRRMDDEGCGPDLVTYTVLIDALCNA
Sbjct: 241  KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 300

Query: 311  GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQMEADGYMPDVVTF 370
            GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT KEFW+QMEADGYMPDVVTF
Sbjct: 301  GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWNQMEADGYMPDVVTF 360

Query: 371  TILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNALICGLLRAGRIEDALKLLDTMES 430
            TILVDALCKAGDF EAFATFDVMRKQGILPNLHTYN+LICGLLRAGRIEDALKLLDTMES
Sbjct: 361  TILVDALCKAGDFVEAFATFDVMRKQGILPNLHTYNSLICGLLRAGRIEDALKLLDTMES 420

Query: 431  LGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAEMGRLRE 490
            +GV+PTAYTYIIFIDYFGKSGDTGKAVETFEKMKA+GIVPNIVACNASLYSLAEMGRLRE
Sbjct: 421  VGVRPTAYTYIIFIDYFGKSGDTGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLRE 480

Query: 491  AKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550
            AK MFNGLRE GL+PDSVTYNMMMKCYS+VGQVDEAVNLLSEMIRNGCEPDVIVVNSLID
Sbjct: 481  AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 540

Query: 551  SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMINQRCSP 610
            SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI QRCSP
Sbjct: 541  SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEQRCSP 600

Query: 611  NTISFNTLLDCFCKNDEVELALKMFSKMTVMGCKPDVLTYNTVIYGLIKENKVNYAFWFF 670
            NTISFNTLLDCFCKNDEVELALKMFSKMTVM CKPDVLTYNTVIYGLIKENKVN+AFWFF
Sbjct: 601  NTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFF 660

Query: 671  HQLKKSVYPDHVTICTLLPGIVKCGRIGDAIKIAKDFMYQVQFRVNRSFWEDLMGGTLVE 730
            HQLKKS++PDHVTICTLLPG+VKCGRIGDAIKIA+DFMYQV+FRVNRSFWEDLMGGTLVE
Sbjct: 661  HQLKKSIHPDHVTICTLLPGLVKCGRIGDAIKIARDFMYQVRFRVNRSFWEDLMGGTLVE 720

Query: 731  AEMDNAILFAEELVLNAICREDSFLIPLVRVLCRHKRALYAYQIFEKFTKNLGINPTLAS 790
            AEMD AI+FAEELVLN ICREDSFLIPLVRVLC+HKR LYAYQIFEKFTK LGI+PTLAS
Sbjct: 721  AEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFEKFTKKLGISPTLAS 780

Query: 791  YNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAFTYNMLLAVHGKSGKIAELFELYKEMI 850
            YNCLIGELLEVR  EKAWD+FQDMKNV CAPD FTYNMLLAVHGKSGKI ELFELYKEMI
Sbjct: 781  YNCLIGELLEVRYTEKAWDLFQDMKNVGCAPDTFTYNMLLAVHGKSGKITELFELYKEMI 840

Query: 851  SRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPLIDGLAKVGRLE 910
            SRRCKPDAITYNI+ISSLAKSNNLDKALDF+YDLVS+DFRPTPRTYGPLIDGLAKVGRLE
Sbjct: 841  SRRCKPDAITYNIIISSLAKSNNLDKALDFFYDLVSNDFRPTPRTYGPLIDGLAKVGRLE 900

Query: 911  EAMWLFDEMSEYGCKPNCAIFNILINGYGKTGDTETACQLFKRMVNEGIRPDLKSYTILV 970
            EAMWLF+EMS+YGCKPNCAIFNILINGYGK GDTETACQLFKRMVNEGIRPDLKSYTILV
Sbjct: 901  EAMWLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILV 960

Query: 971  DCLCLAGRVDEALYYFKELKLTGLDPDFIAYNRIINGLGKSQRMEEALALYSEMRNRGIV 1030
            DCLCLAGRVDEALYYF ELK TGLDPDFIAYNRIINGLGKSQRMEEALALY+EMRNRGIV
Sbjct: 961  DCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIV 1020

Query: 1031 PDLYTYNSLMLNLALAGMVEQAKRMYEDLQLAGLEPDVFTYNALIRGYSMSGNPEHAYTV 1090
            PDLYTYNSLMLNL LAGMVEQAK+MYE+LQLAGLEPDVFTYNALIRGYSMS NPEHAYTV
Sbjct: 1021 PDLYTYNSLMLNLGLAGMVEQAKKMYEELQLAGLEPDVFTYNALIRGYSMSENPEHAYTV 1080

Query: 1091 YKNMMVGGCNPNV 1104
            YKNMMV GCNPN+
Sbjct: 1081 YKNMMVDGCNPNI 1093

[Close]

BLAST of CcUC05G098030 vs. ExPASy TrEMBL
Match: A0A1S4DZB2 (pentatricopeptide repeat-containing protein At4g31850, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493741 PE=4 SV=1)

HSP 1 Score: 2011.1 bits (5209), Expect = 0.0e+00
Identity = 991/1103 (89.85%), Postives = 1032/1103 (93.56%), Query Frame = 0


Query: 1    MSLVILSSLSMFSTCCNGAFSECQIYVPSCNGLSRGMIWENLGDFQTPTLSMANWKKHRK 60
            MSLVI++SLSMF TCCNGAFSECQIYV SCN  SRG+IWE+LGDFQT TLSM NWKKHRK
Sbjct: 1    MSLVIVTSLSMFGTCCNGAFSECQIYVSSCNRSSRGLIWESLGDFQTATLSMVNWKKHRK 60

Query: 61   KRKEFCRLAMQNPEQVMVVKGKTTIPVSEDEILRVLKSMTDPTRALSYFYSVSEFPSVLH 120
            KRK+FCRLA+QNPEQVMVVKGKT I VSEDE+L VLKSMTDP RALSYFYS+SEFP+VLH
Sbjct: 61   KRKDFCRLALQNPEQVMVVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLH 120

Query: 121  TTETCNFMLEFLRVHERVEDMAAIFELMQKKIIRRDLNTYLTIFKALSIRGGLRQVMIAL 180
            TTETCNFMLEFLRVH++VEDMAA+F+LMQKKIIRRDLNTYLTIFKALSIRGGLRQ+   L
Sbjct: 121  TTETCNFMLEFLRVHDKVEDMAAVFDLMQKKIIRRDLNTYLTIFKALSIRGGLRQMTTVL 180

Query: 181  EKMRRAGYVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK 240
             KMRRAG+VLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK
Sbjct: 181  NKMRRAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK 240

Query: 241  RDSETVMVLLKEMESLGLRPNVYTFTICIRVLGRAGKIDKAYEIFRRMDDEGCGPDLVTY 300
            RDSETV+VLLKEME LGLRPNVYTFTICIRVLGRAGKID+AYEIFRRMDDEGCGPDLVTY
Sbjct: 241  RDSETVIVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTY 300

Query: 301  TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQMEA 360
            TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT KEFW+QMEA
Sbjct: 301  TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWNQMEA 360

Query: 361  DGYMPDVVTFTILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNALICGLLRAGRIED 420
            DGYMPDVVTFTILVDALCKAGDF EAFATFDVMRKQ                        
Sbjct: 361  DGYMPDVVTFTILVDALCKAGDFVEAFATFDVMRKQ------------------------ 420

Query: 421  ALKLLDTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLY 480
                       GV+PTAYTYIIFIDYFGKSGDTGKAVETFEKMKA+GIVPNIVACNASLY
Sbjct: 421  -----------GVRPTAYTYIIFIDYFGKSGDTGKAVETFEKMKAKGIVPNIVACNASLY 480

Query: 481  SLAEMGRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEAVNLLSEMIRNGCEP 540
            SLAEMGRLREAK MFNGLRE GL+PDSVTYNMMMKCYS+VGQVDEAVNLLSEMIRNGCEP
Sbjct: 481  SLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 541  DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600
            DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF
Sbjct: 541  DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600

Query: 601  ESMINQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMGCKPDVLTYNTVIYGLIKE 660
            ESMI QRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVM CKPDVLTYNTVIYGLIKE
Sbjct: 601  ESMIEQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660

Query: 661  NKVNYAFWFFHQLKKSVYPDHVTICTLLPGIVKCGRIGDAIKIAKDFMYQVQFRVNRSFW 720
            NKVN+AFWFFHQLKKS++PDHVTICTLLPG+VKCGRIGDAIKIA+DFMYQV+FRVNRSFW
Sbjct: 661  NKVNHAFWFFHQLKKSIHPDHVTICTLLPGLVKCGRIGDAIKIARDFMYQVRFRVNRSFW 720

Query: 721  EDLMGGTLVEAEMDNAILFAEELVLNAICREDSFLIPLVRVLCRHKRALYAYQIFEKFTK 780
            EDLMGGTLVEAEMD AI+FAEELVLN ICREDSFLIPLVRVLC+HKR LYAYQIFEKFTK
Sbjct: 721  EDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFEKFTK 780

Query: 781  NLGINPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAFTYNMLLAVHGKSGKIA 840
             LGI+PTLASYNCLIGELLEVR  EKAWD+FQDMKNV CAPD FTYNMLLAVHGKSGKI 
Sbjct: 781  KLGISPTLASYNCLIGELLEVRYTEKAWDLFQDMKNVGCAPDTFTYNMLLAVHGKSGKIT 840

Query: 841  ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPLI 900
            ELFELYKEMISRRCKPDAITYNI+ISSLAKSNNLDKALDF+YDLVS+DFRPTPRTYGPLI
Sbjct: 841  ELFELYKEMISRRCKPDAITYNIIISSLAKSNNLDKALDFFYDLVSNDFRPTPRTYGPLI 900

Query: 901  DGLAKVGRLEEAMWLFDEMSEYGCKPNCAIFNILINGYGKTGDTETACQLFKRMVNEGIR 960
            DGLAKVGRLEEAMWLF+EMS+YGCKPNCAIFNILINGYGK GDTETACQLFKRMVNEGIR
Sbjct: 901  DGLAKVGRLEEAMWLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIR 960

Query: 961  PDLKSYTILVDCLCLAGRVDEALYYFKELKLTGLDPDFIAYNRIINGLGKSQRMEEALAL 1020
            PDLKSYTILVDCLCLAGRVDEALYYF ELK TGLDPDFIAYNRIINGLGKSQRMEEALAL
Sbjct: 961  PDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALAL 1020

Query: 1021 YSEMRNRGIVPDLYTYNSLMLNLALAGMVEQAKRMYEDLQLAGLEPDVFTYNALIRGYSM 1080
            Y+EMRNRGIVPDLYTYNSLMLNL LAGMVEQAK+MYE+LQLAGLEPDVFTYNALIRGYSM
Sbjct: 1021 YNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKKMYEELQLAGLEPDVFTYNALIRGYSM 1068

Query: 1081 SGNPEHAYTVYKNMMVGGCNPNV 1104
            S NPEHAYTVYKNMMV GCNPN+
Sbjct: 1081 SENPEHAYTVYKNMMVDGCNPNI 1068

[Close]

BLAST of CcUC05G098030 vs. ExPASy TrEMBL
Match: A0A6J1ILH6 (pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476687 PE=4 SV=1)

HSP 1 Score: 1995.7 bits (5169), Expect = 0.0e+00
Identity = 982/1103 (89.03%), Postives = 1036/1103 (93.93%), Query Frame = 0


Query: 1    MSLVILSSLSMFSTCCNGAFSECQIYVPSCNGLSRGMIWENLGDFQTPTLSMANWKKHRK 60
            MSLVI+SSLSMFSTCCNGAFS CQIY  SC+G SRG+I EN GDF+T TLSMANWKKHRK
Sbjct: 1    MSLVIVSSLSMFSTCCNGAFSNCQIYASSCSGSSRGLISENQGDFRTATLSMANWKKHRK 60

Query: 61   KRKEFCRLAMQNPEQVMV-VKGKTTIPVSEDEILRVLKSMTDPTRALSYFYSVSEFPSVL 120
            KRK  CR A+QNPE++MV VK KT  PVSE+EILR LKSMTD TRALSYFYS+ +FP V 
Sbjct: 61   KRKNVCRFALQNPEEMMVAVKEKTKNPVSEEEILRALKSMTDTTRALSYFYSIPDFPCVQ 120

Query: 121  HTTETCNFMLEFLRVHERVEDMAAIFELMQKKIIRRDLNTYLTIFKALSIRGGLRQVMIA 180
            HTTETCNFMLEFLRVHE+VEDMAAIFE MQKKIIRRDL+TYLTIFKALSIRGGLRQV IA
Sbjct: 121  HTTETCNFMLEFLRVHEKVEDMAAIFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIA 180

Query: 181  LEKMRRAGYVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGK 240
            L+KMR AG+VLNAYSYNGLIHLLIQSGFC EALEVYRRMVSEGLKPSLKTYSALMVALGK
Sbjct: 181  LKKMRTAGFVLNAYSYNGLIHLLIQSGFCSEALEVYRRMVSEGLKPSLKTYSALMVALGK 240

Query: 241  KRDSETVMVLLKEMESLGLRPNVYTFTICIRVLGRAGKIDKAYEIFRRMDDEGCGPDLVT 300
            KRDSETVMVLLKEME LGLRPNVYT+TICIRVLGRAGKID+AYEIFRRMD+EGCGPDLVT
Sbjct: 241  KRDSETVMVLLKEMEGLGLRPNVYTYTICIRVLGRAGKIDEAYEIFRRMDEEGCGPDLVT 300

Query: 301  YTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQME 360
            YTVLIDALCNAG+LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQME
Sbjct: 301  YTVLIDALCNAGRLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQME 360

Query: 361  ADGYMPDVVTFTILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNALICGLLRAGRIE 420
            ADGYMPDVVTFTILVD LCKA DFDEAFATFDVMR QGILPNLHTYN LICGLL+AGRIE
Sbjct: 361  ADGYMPDVVTFTILVDTLCKARDFDEAFATFDVMRNQGILPNLHTYNTLICGLLKAGRIE 420

Query: 421  DALKLLDTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASL 480
            DALKLLDTMESLGVQPTAYTY+IFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASL
Sbjct: 421  DALKLLDTMESLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASL 480

Query: 481  YSLAEMGRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEAVNLLSEMIRNGCE 540
            YSLAE GRLREAKNMFNGLRE GL+PDSVTYNMMMKCYS+VGQVD+AVNLL EMI+NGCE
Sbjct: 481  YSLAETGRLREAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCE 540

Query: 541  PDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL 600
            PDVIVVNSLIDSLYKAGRVDEAW+MFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL
Sbjct: 541  PDVIVVNSLIDSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL 600

Query: 601  FESMINQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMGCKPDVLTYNTVIYGLIK 660
            FESMI QRCSPNTISFNTLLDCFCKNDE+ELAL+MFSKMT M CKPDVLTYNTVIYGLIK
Sbjct: 601  FESMIKQRCSPNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIK 660

Query: 661  ENKVNYAFWFFHQLKKSVYPDHVTICTLLPGIVKCGRIGDAIKIAKDFMYQVQFRVNRSF 720
            EN+VNYAFWFFHQLKKS+YPDHVTICTLLPGIVK GRIGDAIKIAKDF+ QVQF VNRSF
Sbjct: 661  ENRVNYAFWFFHQLKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFHVNRSF 720

Query: 721  WEDLMGGTLVEAEMDNAILFAEELVLNAICREDSFLIPLVRVLCRHKRALYAYQIFEKFT 780
            WEDLMGGTLVEAE+D A++FAEELVLN ICREDSFLIPL+RVLC+ KRALYAYQIFE FT
Sbjct: 721  WEDLMGGTLVEAEIDKAVIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFT 780

Query: 781  KNLGINPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAFTYNMLLAVHGKSGKI 840
              L I PT+ SYNCLIGELLEV   EKAWD+FQDMKN ACAPD FTYNMLL VHGKSGKI
Sbjct: 781  TKLEIKPTVVSYNCLIGELLEVHYTEKAWDLFQDMKNTACAPDTFTYNMLLDVHGKSGKI 840

Query: 841  AELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPL 900
            AELFELY EM+SR+CKP+ ITYNIVISSLAKSNNLDKALDFYYDLVSSDF PTP TYGPL
Sbjct: 841  AELFELYNEMVSRKCKPNVITYNIVISSLAKSNNLDKALDFYYDLVSSDFCPTPCTYGPL 900

Query: 901  IDGLAKVGRLEEAMWLFDEMSEYGCKPNCAIFNILINGYGKTGDTETACQLFKRMVNEGI 960
            +DGLAK GRLEEAM LF+EM +YGCKPNCAIFNILINGYGKTGD E A QLFKRMV EGI
Sbjct: 901  LDGLAKAGRLEEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIEIAHQLFKRMVKEGI 960

Query: 961  RPDLKSYTILVDCLCLAGRVDEALYYFKELKLTGLDPDFIAYNRIINGLGKSQRMEEALA 1020
            RPDLKSYTILV+CLCLAGRVDEALYYF+ELK TGLDPDFIAYNRIINGLGKSQRMEEALA
Sbjct: 961  RPDLKSYTILVECLCLAGRVDEALYYFEELKSTGLDPDFIAYNRIINGLGKSQRMEEALA 1020

Query: 1021 LYSEMRNRGIVPDLYTYNSLMLNLALAGMVEQAKRMYEDLQLAGLEPDVFTYNALIRGYS 1080
            LYSEMR+RGIVPDL+TYN+++L L LAGMVE+A+RMYE+LQLAGLEPDVFTYNALIRGYS
Sbjct: 1021 LYSEMRDRGIVPDLHTYNAMLLYLGLAGMVEEAERMYEELQLAGLEPDVFTYNALIRGYS 1080

Query: 1081 MSGNPEHAYTVYKNMMVGGCNPN 1103
            +SGNPEHAYTVYKNMMV GCNPN
Sbjct: 1081 VSGNPEHAYTVYKNMMVDGCNPN 1103

[Close]

BLAST of CcUC05G098030 vs. ExPASy TrEMBL
Match: A0A6J1FAM6 (pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443588 PE=4 SV=1)

HSP 1 Score: 1994.2 bits (5165), Expect = 0.0e+00
Identity = 980/1103 (88.85%), Postives = 1038/1103 (94.11%), Query Frame = 0


Query: 1    MSLVILSSLSMFSTCCNGAFSECQIYVPSCNGLSRGMIWENLGDFQTPTLSMANWKKHRK 60
            MSLVI+SSLSMFSTCCNGAFS CQI   SC+G SRG+I ENLG F+T TLSMANWKKHRK
Sbjct: 1    MSLVIVSSLSMFSTCCNGAFSNCQISASSCSGSSRGLISENLGGFRTATLSMANWKKHRK 60

Query: 61   KRKEFCRLAMQNPEQVMV-VKGKTTIPVSEDEILRVLKSMTDPTRALSYFYSVSEFPSVL 120
            KRK  CR A+QNPE+V V VK KT IPVSE+EILR LKSMTD T ALSYFYS+ +FP V 
Sbjct: 61   KRKNVCRFALQNPEEVTVAVKEKTKIPVSEEEILRALKSMTDTTHALSYFYSIPDFPCVQ 120

Query: 121  HTTETCNFMLEFLRVHERVEDMAAIFELMQKKIIRRDLNTYLTIFKALSIRGGLRQVMIA 180
            HTTETCNFMLEFLRVHE+VEDMAA+FE MQKKIIRRDL+TYLTIFKALSIRGGLRQV IA
Sbjct: 121  HTTETCNFMLEFLRVHEKVEDMAAVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIA 180

Query: 181  LEKMRRAGYVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGK 240
            L+KMR+AG+VLNAYSYNGLIHLLIQSGFC EALEVYRRMVSEGLKPSLKTYSALMVALGK
Sbjct: 181  LKKMRKAGFVLNAYSYNGLIHLLIQSGFCSEALEVYRRMVSEGLKPSLKTYSALMVALGK 240

Query: 241  KRDSETVMVLLKEMESLGLRPNVYTFTICIRVLGRAGKIDKAYEIFRRMDDEGCGPDLVT 300
            KRDSETVMVLLKEMESLGLRPNVYT+TICIRVLGRAGKID+AYEIFRRMD+EGCGPDLVT
Sbjct: 241  KRDSETVMVLLKEMESLGLRPNVYTYTICIRVLGRAGKIDEAYEIFRRMDEEGCGPDLVT 300

Query: 301  YTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQME 360
            YTVLIDALCNAG+LE+AKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQME
Sbjct: 301  YTVLIDALCNAGRLESAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQME 360

Query: 361  ADGYMPDVVTFTILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNALICGLLRAGRIE 420
            ADGYMPDVVTFTILVD LCKA DFDEAFATFDVMRKQGILPNLHTYN LICGLL+AGRIE
Sbjct: 361  ADGYMPDVVTFTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIE 420

Query: 421  DALKLLDTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASL 480
            DALKLLDTMESLGVQPTAYTY+IFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASL
Sbjct: 421  DALKLLDTMESLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASL 480

Query: 481  YSLAEMGRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEAVNLLSEMIRNGCE 540
            YSLAE GRLREAKNMFNGLRE GL+PDSVTYNMMMKCYS+VGQVD+AVNLL EMI+NGCE
Sbjct: 481  YSLAETGRLREAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCE 540

Query: 541  PDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL 600
            PDVIVVNSLIDSLYKAGRVDEAW+MFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL
Sbjct: 541  PDVIVVNSLIDSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL 600

Query: 601  FESMINQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMGCKPDVLTYNTVIYGLIK 660
            FESMI QRCSPNTISFNTLLDCFCKNDE+ELAL+MFSKMT M CKPDVLTYNTVIYGLIK
Sbjct: 601  FESMIKQRCSPNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIK 660

Query: 661  ENKVNYAFWFFHQLKKSVYPDHVTICTLLPGIVKCGRIGDAIKIAKDFMYQVQFRVNRSF 720
            EN+VNYAFWFFHQLKKS+YPDHVTICTLLPGIVK GRIGDAIKIAKDF+ QVQFRVNRSF
Sbjct: 661  ENRVNYAFWFFHQLKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSF 720

Query: 721  WEDLMGGTLVEAEMDNAILFAEELVLNAICREDSFLIPLVRVLCRHKRALYAYQIFEKFT 780
            WEDLMGGTLVEAE+D A++FAEELVLN ICREDSFLIPL+RVLC+ KRALYAYQIFE FT
Sbjct: 721  WEDLMGGTLVEAEIDKAVIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFT 780

Query: 781  KNLGINPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAFTYNMLLAVHGKSGKI 840
             NL I PT+ASYNCLIGELLEV   EKAWD+FQDMKN ACAPD FTYNMLL VHGKSGKI
Sbjct: 781  TNLEIKPTVASYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFTYNMLLDVHGKSGKI 840

Query: 841  AELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPL 900
            AELFELY EM+SR+CKP+ ITYNIVISSLAKSNNLDKALDFYYDLVSSDF PTP TYGPL
Sbjct: 841  AELFELYNEMVSRKCKPNVITYNIVISSLAKSNNLDKALDFYYDLVSSDFCPTPCTYGPL 900

Query: 901  IDGLAKVGRLEEAMWLFDEMSEYGCKPNCAIFNILINGYGKTGDTETACQLFKRMVNEGI 960
            +DGLAK GRLEEAM LF+EM +YGCKPNCAIFNILINGYGKTGD + A  LFKRMV EG+
Sbjct: 901  LDGLAKAGRLEEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIDIAHHLFKRMVKEGV 960

Query: 961  RPDLKSYTILVDCLCLAGRVDEALYYFKELKLTGLDPDFIAYNRIINGLGKSQRMEEALA 1020
            RPDLKSYTILV+CLCLAGRVDEALYYF+ELK +GLDPDFIAYNRIINGLGKSQRMEEALA
Sbjct: 961  RPDLKSYTILVECLCLAGRVDEALYYFEELKSSGLDPDFIAYNRIINGLGKSQRMEEALA 1020

Query: 1021 LYSEMRNRGIVPDLYTYNSLMLNLALAGMVEQAKRMYEDLQLAGLEPDVFTYNALIRGYS 1080
            LYSEMR RGIVPDL+TYN+++L L LAGMVE+A+RMYE+LQLAGLEPDVFTYNALIRGYS
Sbjct: 1021 LYSEMRERGIVPDLHTYNAMLLYLGLAGMVEEAERMYEELQLAGLEPDVFTYNALIRGYS 1080

Query: 1081 MSGNPEHAYTVYKNMMVGGCNPN 1103
            +SGNPEHAYTVYKNMMV GCNPN
Sbjct: 1081 VSGNPEHAYTVYKNMMVDGCNPN 1103

[Close]

BLAST of CcUC05G098030 vs. TAIR 10
Match: AT4G31850.1 (proton gradient regulation 3 )

HSP 1 Score: 1421.4 bits (3678), Expect = 0.0e+00
Identity = 692/1066 (64.92%), Postives = 845/1066 (79.27%), Query Frame = 0


Query: 43   GDFQTPTLSMANWKKHRKKRKEFCRLAMQNPEQV---MVVKGKTTIPVSEDEILRVLKSM 102
            G  +   L + + KKH +++   C +           M+ K       S +E+ R LKS 
Sbjct: 36   GGLKFHALKIGSRKKHWRRKSMRCSVVSMKSSDFSGSMIRKSSKPDLSSSEEVTRGLKSF 95

Query: 103  TDPTRALSYFYSVSEFPSVLHTTETCNFMLEFLRVHERVEDMAAIFELMQKKIIRRDLNT 162
             D   + SYF SV+   +++HTTETCN+MLE LRV  ++E+MA +F+LMQK+II+RD NT
Sbjct: 96   PDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNT 155

Query: 163  YLTIFKALSIRGGLRQVMIALEKMRRAGYVLNAYSYNGLIHLLIQSGFCGEALEVYRRMV 222
            YLTIFK+LS++GGL+Q   AL KMR  G+VLNAYSYNGLIHLL++S FC EA+EVYRRM+
Sbjct: 156  YLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI 215

Query: 223  SEGLKPSLKTYSALMVALGKKRDSETVMVLLKEMESLGLRPNVYTFTICIRVLGRAGKID 282
             EG +PSL+TYS+LMV LGK+RD ++VM LLKEME+LGL+PNVYTFTICIRVLGRAGKI+
Sbjct: 216  LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275

Query: 283  KAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLL 342
            +AYEI +RMDDEGCGPD+VTYTVLIDALC A +L+ AKE+F KMK   HKPD+V YITLL
Sbjct: 276  EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335

Query: 343  DKFNDFGDLDTVKEFWSQMEADGYMPDVVTFTILVDALCKAGDFDEAFATFDVMRKQGIL 402
            D+F+D  DLD+VK+FWS+ME DG++PDVVTFTILVDALCKAG+F EAF T DVMR QGIL
Sbjct: 336  DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395

Query: 403  PNLHTYNALICGLLRAGRIEDALKLLDTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVET 462
            PNLHTYN LICGLLR  R++DAL+L   MESLGV+PTAYTYI+FIDY+GKSGD+  A+ET
Sbjct: 396  PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455

Query: 463  FEKMKARGIVPNIVACNASLYSLAEMGRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSR 522
            FEKMK +GI PNIVACNASLYSLA+ GR REAK +F GL++IGL PDSVTYNMMMKCYS+
Sbjct: 456  FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515

Query: 523  VGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVT 582
            VG++DEA+ LLSEM+ NGCEPDVIVVNSLI++LYKA RVDEAW+MF RMK+MKL PTVVT
Sbjct: 516  VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575

Query: 583  YNTLLSGLGKEGRVQKAIELFESMINQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMT 642
            YNTLL+GLGK G++Q+AIELFE M+ + C PNTI+FNTL DC CKNDEV LALKM  KM 
Sbjct: 576  YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635

Query: 643  VMGCKPDVLTYNTVIYGLIKENKVNYAFWFFHQLKKSVYPDHVTICTLLPGIVKCGRIGD 702
             MGC PDV TYNT+I+GL+K  +V  A  FFHQ+KK VYPD VT+CTLLPG+VK   I D
Sbjct: 636  DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIED 695

Query: 703  AIKIAKDFMYQVQFRVNRSFWEDLMGGTLVEAEMDNAILFAEELVLNAICRE-DSFLIPL 762
            A KI  +F+Y    +    FWEDL+G  L EA +DNA+ F+E LV N ICR+ DS L+P+
Sbjct: 696  AYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755

Query: 763  VRVLCRHKRALYAYQIFEKFTKNLGINPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVA 822
            +R  C+H     A  +FEKFTK+LG+ P L +YN LIG LLE   IE A DVF  +K+  
Sbjct: 756  IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815

Query: 823  CAPDAFTYNMLLAVHGKSGKIAELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKAL 882
            C PD  TYN LL  +GKSGKI ELFELYKEM +  C+ + IT+NIVIS L K+ N+D AL
Sbjct: 816  CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875

Query: 883  DFYYDLVSS-DFRPTPRTYGPLIDGLAKVGRLEEAMWLFDEMSEYGCKPNCAIFNILING 942
            D YYDL+S  DF PT  TYGPLIDGL+K GRL EA  LF+ M +YGC+PNCAI+NILING
Sbjct: 876  DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935

Query: 943  YGKTGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFKELKLTGLDPD 1002
            +GK G+ + AC LFKRMV EG+RPDLK+Y++LVDCLC+ GRVDE L+YFKELK +GL+PD
Sbjct: 936  FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995

Query: 1003 FIAYNRIINGLGKSQRMEEALALYSEMR-NRGIVPDLYTYNSLMLNLALAGMVEQAKRMY 1062
             + YN IINGLGKS R+EEAL L++EM+ +RGI PDLYTYNSL+LNL +AGMVE+A ++Y
Sbjct: 996  VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055

Query: 1063 EDLQLAGLEPDVFTYNALIRGYSMSGNPEHAYTVYKNMMVGGCNPN 1103
             ++Q AGLEP+VFT+NALIRGYS+SG PEHAY VY+ M+ GG +PN
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101

[Close]

BLAST of CcUC05G098030 vs. TAIR 10
Match: AT3G06920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 354.4 bits (908), Expect = 3.5e-97
Identity = 212/750 (28.27%), Postives = 367/750 (48.93%), Query Frame = 0


Query: 347  DLDTVKEFWSQMEADGYMPDVVTFTILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYN 406
            + D + +   +M   G+ P V T   +V    KA    E +    +MRK    P    Y 
Sbjct: 113  NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYT 172

Query: 407  ALICGLLRAGRIEDALKLLDTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKAR 466
             LI         +  L L   M+ LG +PT + +   I  F K G    A+   ++MK+ 
Sbjct: 173  TLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS 232

Query: 467  GIVPNIVACNASLYSLAEMGRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEA 526
             +  +IV  N  + S  ++G++  A   F+ +   GL PD VTY  M+    +  ++DEA
Sbjct: 233  SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292

Query: 527  VNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSG 586
            V +   + +N   P     N++I     AG+ DEA+ + +R +     P+V+ YN +L+ 
Sbjct: 293  VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352

Query: 587  LGKEGRVQKAIELFESMINQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMGCKPD 646
            L K G+V +A+++FE M  +  +PN  ++N L+D  C+  +++ A ++   M   G  P+
Sbjct: 353  LRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN 412

Query: 647  VLTYNTVIYGLIKENKVNYAFWFFHQLK-KSVYPDHVTICTLLPGIVKCGRIGDAIKIAK 706
            V T N ++  L K  K++ A   F ++  K   PD +T C+L+ G+ K GR+ DA K+  
Sbjct: 413  VRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV-- 472

Query: 707  DFMYQVQFRVNRSFWEDLMGGTLVEAEMDNAILFAEELVLNAICREDSFL-IPLVRVLCR 766
                                                E +L++ CR +S +   L++    
Sbjct: 473  -----------------------------------YEKMLDSDCRTNSIVYTSLIKNFFN 532

Query: 767  HKRALYAYQIFEKFTKNLGINPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAF 826
            H R    ++I++    N   +P L   N  +  + +    EK   +F+++K     PDA 
Sbjct: 533  HGRKEDGHKIYKDMI-NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 592

Query: 827  TYNMLLAVHG--KSGKIAELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFYY 886
            +Y++L  +HG  K+G   E +EL+  M  + C  D   YNIVI    K   ++KA     
Sbjct: 593  SYSIL--IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 652

Query: 887  DLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMWLFDEMSEYGCKPNCAIFNILINGYGKTG 946
            ++ +  F PT  TYG +IDGLAK+ RL+EA  LF+E      + N  I++ LI+G+GK G
Sbjct: 653  EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 712

Query: 947  DTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFKELKLTGLDPDFIAYN 1006
              + A  + + ++ +G+ P+L ++  L+D L  A  ++EAL  F+ +K     P+ + Y 
Sbjct: 713  RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 772

Query: 1007 RIINGLGKSQRMEEALALYSEMRNRGIVPDLYTYNSLMLNLALAGMVEQAKRMYEDLQLA 1066
             +INGL K ++  +A   + EM+ +G+ P   +Y +++  LA AG + +A  +++  +  
Sbjct: 773  ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 821

Query: 1067 GLEPDVFTYNALIRGYSMSGNPEHAYTVYK 1093
            G  PD   YNA+I G S       A+++++
Sbjct: 833  GGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821

[Close]

BLAST of CcUC05G098030 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 328.6 bits (841), Expect = 2.0e-89
Identity = 233/924 (25.22%), Postives = 418/924 (45.24%), Query Frame = 0


Query: 124  TCNFML-EFLRVHERVEDMAAIFELMQKKIIRRDLNTYLTIFKALSIRGGLRQVMIALEK 183
            TCN +L   ++  E V   + + E++++KI   D+ T+  +   L   G   +    ++K
Sbjct: 200  TCNAILGSVVKSGEDVSVWSFLKEMLKRKIC-PDVATFNILINVLCAEGSFEKSSYLMQK 259

Query: 184  MRRAGYVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRD 243
            M ++GY     +YN ++H   + G    A+E+   M S+G+   + TY+ L+  L +   
Sbjct: 260  MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 319

Query: 244  SETVMVLLKEMESLGLRPNVYTFTICIRVLGRAGKIDKAYEIFRRMDDEGCGPDLVTYTV 303
                 +LL++M    + PN  T+   I      GK+  A ++   M   G  P+ VT+  
Sbjct: 320  IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 379

Query: 304  LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQMEADG 363
            LID   + G  + A ++F  M+A G  P +V Y  LLD      + D  + F+ +M+ +G
Sbjct: 380  LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 439

Query: 364  YMPDVVTFTILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNALICGLLRAGRIEDAL 423
                 +T+T ++D LCK G  DEA    + M K GI P++ TY+ALI G  + GR + A 
Sbjct: 440  VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAK 499

Query: 424  KLLDTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSL 483
            +++  +  +G+ P    Y   I    + G   +A+  +E M   G   +    N  + SL
Sbjct: 500  EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 559

Query: 484  AEMGRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEAVNLLSEMIRNGCEPDV 543
             + G++ EA+     +   G+ P++V+++ ++  Y   G+  +A ++  EM + G  P  
Sbjct: 560  CKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTF 619

Query: 544  IVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 603
                SL+  L K G + EA +    +  +  +   V YNTLL+ + K G + KA+ LF  
Sbjct: 620  FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGE 679

Query: 604  MINQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMG-CKPDVLTYNTVIYGLIKEN 663
            M+ +   P++ ++ +L+   C+  +  +A+    +    G   P+ + Y   + G+ K  
Sbjct: 680  MVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAG 739

Query: 664  KVNYAFWFFHQLKKSVY-PDHVTICTLLPGIVKCGRIGDAIKIAKDFMYQVQFRVNRSFW 723
            +     +F  Q+    + PD VT   ++ G  + G+I     +  + M       N + +
Sbjct: 740  QWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE-MGNQNGGPNLTTY 799

Query: 724  EDLMGGTLVEAEMDNAILFAEELVLNAICREDSFLIPLVRVLCRHKRALYAYQIFEKFTK 783
              L+ G     ++  + L    ++LN I  +      LV  +C         +I + F  
Sbjct: 800  NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF-- 859

Query: 784  NLGINPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAFTYNMLLAVHGKSGKIA 843
                          I   +EV                    D +T+NML++    +G+I 
Sbjct: 860  --------------ICRGVEV--------------------DRYTFNMLISKCCANGEIN 919

Query: 844  ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPLI 903
              F+L K M S     D  T + ++S L +++   ++    +++      P  R Y  LI
Sbjct: 920  WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 979

Query: 904  DGLAKVGRLEEAMWLFDEMSEYG-CKPNCAIFNILINGYGKTGDTETACQLFKRMVNEGI 963
            +GL +VG ++ A  + +EM  +  C PN A  + ++    K G  + A  L + M+   +
Sbjct: 980  NGLCRVGDIKTAFVVKEEMIAHKICPPNVA-ESAMVRALAKCGKADEATLLLRFMLKMKL 1039

Query: 964  RPDLKSYTILVDCLCLAGRVDEALYYFKELKLTGLDPDFIAYNRIINGLGKSQRMEEALA 1023
             P + S+T L+   C  G V EAL     +   GL  D ++YN +I GL     M  A  
Sbjct: 1040 VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFE 1084

Query: 1024 LYSEMRNRGIVPDLYTYNSLMLNL 1044
            LY EM+  G + +  TY +L+  L
Sbjct: 1100 LYEEMKGDGFLANATTYKALIRGL 1084

[Close]

BLAST of CcUC05G098030 vs. TAIR 10
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 327.8 bits (839), Expect = 3.5e-89
Identity = 223/859 (25.96%), Postives = 407/859 (47.38%), Query Frame = 0


Query: 187  GYVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSETV 246
            G+  +  S+  LIH L+++     A  + + ++   LKP                 S+  
Sbjct: 99   GFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKP-----------------SDVF 158

Query: 247  MVLLKEMESLGLRPNVYTFTICIRVLGRAGKIDKAYEIFRRMDDE-GCGPDLVTYTVLID 306
             VL    E   L  +  +F + I+   R+ ++     +F+ M  +    P++ T + L+ 
Sbjct: 159  NVLFSCYEKCKLSSS-SSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLH 218

Query: 307  ALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQMEADGYMP 366
             L        A ELF  M + G +PD  IY  ++    +  DL   KE  + MEA G   
Sbjct: 219  GLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDV 278

Query: 367  DVVTFTILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNALICGLLRAGRIEDALKLL 426
            ++V + +L+D LCK     EA      +  + + P++ TY  L+ GL +    E  L+++
Sbjct: 279  NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 338

Query: 427  DTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAEM 486
            D M  L   P+       ++   K G   +A+   +++   G+ PN+   NA + SL + 
Sbjct: 339  DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 398

Query: 487  GRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEAVNLLSEMIRNGCEPDVIVV 546
             +  EA+ +F+ + +IGL P+ VTY++++  + R G++D A++ L EM+  G +  V   
Sbjct: 399  RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 458

Query: 547  NSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIN 606
            NSLI+   K G +  A      M + KL PTVVTY +L+ G   +G++ KA+ L+  M  
Sbjct: 459  NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 518

Query: 607  QRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMGCKPDVLTYNTVIYGLIKENKVNY 666
            +  +P+  +F TLL    +   +  A+K+F++M     KP+ +TYN +I G  +E  ++ 
Sbjct: 519  KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 578

Query: 667  AFWFFHQL-KKSVYPDHVTICTLLPGIVKCGRIGDAIKIAKDFMYQVQFRVNRSFWEDLM 726
            AF F  ++ +K + PD  +   L+ G+   G+  +A K+  D +++    +N   +  L+
Sbjct: 579  AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLL 638

Query: 727  GGTLVEAEMDNAILFAEELVLNAICREDSFLIPLVRVLCRHKRALYAYQIFEKFTKNLGI 786
             G   E +++ A+   +E+V                                      G+
Sbjct: 639  HGFCREGKLEEALSVCQEMV------------------------------------QRGV 698

Query: 787  NPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAFTYNMLLAVHGKSGKIAELFE 846
            +  L  Y  LI   L+ +  +  + + ++M +    PD   Y  ++    K+G   E F 
Sbjct: 699  DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 758

Query: 847  LYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYGPLIDGLA 906
            ++  MI+  C P+ +TY  VI+ L K+  +++A      +      P   TYG  +D L 
Sbjct: 759  IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 818

Query: 907  K-VGRLEEAMWLFDEMSEYGCKPNCAIFNILINGYGKTGDTETACQLFKRMVNEGIRPDL 966
            K    +++A+ L + + + G   N A +N+LI G+ + G  E A +L  RM+ +G+ PD 
Sbjct: 819  KGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 878

Query: 967  KSYTILVDCLCLAGRVDEALYYFKELKLTGLDPDFIAYNRIINGLGKSQRMEEALALYSE 1026
             +YT +++ LC    V +A+  +  +   G+ PD +AYN +I+G   +  M +A  L +E
Sbjct: 879  ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 901

Query: 1027 MRNRGIVPDLYTYNSLMLN 1043
            M  +G++P+  T  +   N
Sbjct: 939  MLRQGLIPNNKTSRTTTSN 901

[Close]

BLAST of CcUC05G098030 vs. TAIR 10
Match: AT5G14770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 303.1 bits (775), Expect = 9.2e-82
Identity = 210/797 (26.35%), Postives = 371/797 (46.55%), Query Frame = 0


Query: 180 LEKMRRAGYVLNAYSYNGLIHLLIQSGFCGEALE-VYRRMVSEGLKPSLKTYSALMVALG 239
           L  M   G V ++  +N LIH    +G   + +  +Y +M++ G+ P +   + L+ +  
Sbjct: 81  LSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFC 140

Query: 240 K-KRDSETVMVLLKEMESLGLRPNVYTFTICIRVLGRAGKIDKAYEIFRRMDDEGCGPDL 299
           K  R S  + +L   + S+    +  T+   I  L   G  D+AY+    M   G  PD 
Sbjct: 141 KVGRLSFAISLLRNRVISI----DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDT 200

Query: 300 VTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQ 359
           V+Y  LID  C  G        FV+ KA   +  ++  IT     + + +L  ++E +  
Sbjct: 201 VSYNTLIDGFCKVGN-------FVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRD 260

Query: 360 MEADGYMPDVVTFTILVDALCKAGDFDEAFATFDVMRKQGILPNLHTYNALICGLLRAGR 419
           M   G+ PDVVTF+ +++ LCK G   E       M +  + PN  TY  L+  L +A  
Sbjct: 261 MVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANI 320

Query: 420 IEDALKLLDTMESLGVQPTAYTYIIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNA 479
              AL L   M   G+      Y + +D   K+GD  +A +TF+ +     VPN+V   A
Sbjct: 321 YRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTA 380

Query: 480 SLYSLAEMGRLREAKNMFNGLREIGLSPDSVTYNMMMKCYSRVGQVDEAVNLLSEMIRNG 539
            +  L + G L  A+ +   + E  + P+ VTY+ M+  Y + G ++EAV+LL +M    
Sbjct: 381 LVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQN 440

Query: 540 CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAI 599
             P+     ++ID L+KAG+ + A ++   M+ + +       + L++ L + GR+++  
Sbjct: 441 VVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 500

Query: 600 ELFESMINQRCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMGCKPDVLTYNTVIYGL 659
            L + M+++  + + I++ +L+D F K  + E AL    +M   G   DV++YN +I G+
Sbjct: 501 GLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGM 560

Query: 660 IKENKVNYAFWFFHQLKKSVYPDHVTICTLLPGIVKCGRIGDAIKIAKDFMYQVQFRVNR 719
           +K  KV   + +    +K + PD  T   ++    K G     +K+  D M     + + 
Sbjct: 561 LKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKL-WDKMKSCGIKPSL 620

Query: 720 SFWEDLMGGTLVEAEMDNAILFAEELVLNAICREDSFLIPLVRVLCRHKRALYAYQIFEK 779
                ++G      +M+ AI    +++L  I    +     +    +HKRA   ++  E 
Sbjct: 621 MSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHET 680

Query: 780 FTKNLGINPTLASYNCLIGELLEVRCIEKAWDVFQDMKNVACAPDAFTYNMLLAVHGKSG 839
              + GI  +   YN LI  L ++   +KA  V  DM+     PD  T+N L+  +    
Sbjct: 681 LL-SYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGS 740

Query: 840 KIAELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFYYDLVSSDFRPTPRTYG 899
            + +    Y  M+     P+  TYN +I  L+ +  + +   +  ++ S   RP   TY 
Sbjct: 741 HVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYN 800

Query: 900 PLIDGLAKVGRLEEAMWLFDEMSEYGCKPNCAIFNILINGYGKTGDTETACQLFKRMVNE 959
            LI G AK+G ++ +M ++ EM   G  P  + +N+LI+ +   G    A +L K M   
Sbjct: 801 ALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKR 860

Query: 960 GIRPDLKSYTILVDCLC 975
           G+ P+  +Y  ++  LC
Sbjct: 861 GVSPNTSTYCTMISGLC 864

The following BLAST results are available for this feature:

BLAST of CcUC05G098030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897914.1	0.0e+00	94.69	pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Benincasa ...	[more]
XP_008452843.1	0.0e+00	92.84	PREDICTED: pentatricopeptide repeat-containing protein At4g31850, chloroplastic ...	[more]
KAA0064575.1	0.0e+00	92.96	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK20015...	[more]
XP_004145582.3	0.0e+00	91.93	pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Cucumis sa...	[more]
XP_016901317.1	0.0e+00	89.85	PREDICTED: pentatricopeptide repeat-containing protein At4g31850, chloroplastic ...	[more]

BLAST of CcUC05G098030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZ52	0.0e+00	64.92	Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop...	[more]
Q9M907	4.9e-96	28.27	Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX...	[more]
Q9LVQ5	2.9e-88	25.22	Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX...	[more]
Q9FJE6	4.9e-88	25.96	Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th...	[more]
Q76C99	1.9e-79	26.57	Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV...	[more]

BLAST of CcUC05G098030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BUU7	0.0e+00	92.84	pentatricopeptide repeat-containing protein At4g31850, chloroplastic isoform X1 ...	[more]
A0A5D3D8X9	0.0e+00	92.96	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DZB2	0.0e+00	89.85	pentatricopeptide repeat-containing protein At4g31850, chloroplastic isoform X2 ...	[more]
A0A6J1ILH6	0.0e+00	89.03	pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Cucurbit...	[more]
A0A6J1FAM6	0.0e+00	88.85	pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Cucurbit...	[more]

BLAST of CcUC05G098030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31850.1	0.0e+00	64.92	proton gradient regulation 3	[more]
AT3G06920.1	3.5e-97	28.27	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G55840.1	2.0e-89	25.22	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G59900.1	3.5e-89	25.96	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G14770.1	9.2e-82	26.35	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 613..647 e-value: 7.8E-10 score: 36.3 coord: 229..262 e-value: 5.2E-5 score: 21.1 coord: 438..472 e-value: 6.7E-8 score: 30.2 coord: 930..962 e-value: 4.3E-10 score: 37.1 coord: 544..576 e-value: 1.4E-8 score: 32.4 coord: 790..823 e-value: 2.6E-5 score: 22.1 coord: 824..858 e-value: 2.9E-8 score: 31.4 coord: 1069..1103 e-value: 4.8E-9 score: 33.8 coord: 578..612 e-value: 2.0E-11 score: 41.3 coord: 298..331 e-value: 2.0E-9 score: 35.0 coord: 895..928 e-value: 1.2E-8 score: 32.5 coord: 859..892 e-value: 2.3E-7 score: 28.6 coord: 403..436 e-value: 3.0E-9 score: 34.5 coord: 965..997 e-value: 9.6E-8 score: 29.8 coord: 1034..1068 e-value: 1.3E-5 score: 23.1 coord: 1000..1032 e-value: 1.5E-9 score: 35.4 coord: 368..401 e-value: 5.2E-10 score: 36.9 coord: 508..542 e-value: 4.5E-12 score: 43.4 coord: 193..226 e-value: 5.1E-6 score: 24.3 coord: 263..296 e-value: 9.9E-9 score: 32.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 895..924 e-value: 3.0E-7 score: 30.2 coord: 545..571 e-value: 3.9E-6 score: 26.7 coord: 790..815 e-value: 0.12 score: 12.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 423..477 e-value: 2.0E-7 score: 31.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 821..870 e-value: 1.1E-13 score: 51.1 coord: 996..1040 e-value: 3.3E-13 score: 49.6 coord: 575..624 e-value: 3.0E-16 score: 59.3 coord: 505..542 e-value: 1.0E-11 score: 44.8 coord: 365..413 e-value: 7.9E-15 score: 54.8 coord: 926..974 e-value: 1.8E-13 score: 50.4 coord: 645..691 e-value: 8.3E-8 score: 32.3 coord: 1066..1103 e-value: 4.0E-8 score: 33.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 611..645 score: 12.408249
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 857..891 score: 11.41077
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 822..856 score: 11.969797
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 541..575 score: 12.506901
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 226..260 score: 10.084454
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 576..610 score: 13.109773
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 962..996 score: 11.476539
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 436..470 score: 11.136739
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 997..1031 score: 12.912469
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 787..821 score: 9.328124
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 401..435 score: 13.26323
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 646..676 score: 8.736214
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 261..295 score: 12.024604
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 892..926 score: 13.296114
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 296..330 score: 13.471496
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 1067..1101 score: 12.539784
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 366..400 score: 13.668798
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 927..961 score: 12.638436
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 471..505 score: 9.54735
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 506..540 score: 14.688199
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 191..225 score: 11.860184
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 1032..1066 score: 10.884628
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 331..365 score: 9.29524
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 355..428 e-value: 2.5E-24 score: 87.8 coord: 429..499 e-value: 8.9E-15 score: 56.7 coord: 640..712 e-value: 3.3E-13 score: 51.6 coord: 570..639 e-value: 3.4E-23 score: 84.1 coord: 500..569 e-value: 1.4E-23 score: 85.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 255..345 e-value: 1.0E-28 score: 101.9 coord: 745..872 e-value: 5.0E-31 score: 109.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 873..989 e-value: 2.9E-36 score: 127.5 coord: 91..254 e-value: 4.3E-26 score: 94.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 990..1114 e-value: 4.0E-31 score: 110.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 248..1022
IPR033443	Pentacotripeptide-repeat region of PRORP	PFAM	PF17177	PPR_long	coord: 174..315 e-value: 8.4E-14 score: 51.4
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 1035..1112 coord: 65..933 coord: 931..1039
None	No IPR available	PANTHER	PTHR47933:SF2	PROTON GRADIENT REGULATION3-LIKE PROTEIN	coord: 1035..1112 coord: 65..933 coord: 931..1039
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 775..987

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G098030.1	CcUC05G098030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032544	plastid translation
biological_process	GO:0043489	RNA stabilization
cellular_component	GO:0009536	plastid
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding