CcUC05G097020 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G097020
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	60S ribosomal protein L8
Location	CicolChr05: 23999345 .. 24001286 (-)
RNA-Seq Expression	CcUC05G097020
Synteny	CcUC05G097020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTAAACCTGTATCCAAACACCCTATCTAGGGCAACCCATTAGTCATCTTCCTTTTCTCCTCTAAAAACCCTAATCCTCTTTCTATTTATCATAACACCGCCTGCGCCTCTCTTCCCCTTCCCCTTCCCCATATCCCCGAAAACCCTAATTCCCATCCTCCAATGGGTCGTGTTATCAGAGCACAACGTAAGGGAGCTGGATCAGTCTTCCGCTCTCACACTCACCACCGGAAGGGCGCTGCCCGTTTCCGCTCCCTCGACTTCGGCGAGCGAAATGGTTACCTGAAAGGTGTGGTCAGCGAAATCATTCACGATCCGGGCAGAGGTGCTCCGTTGGCCCGCGTTACTTTCCGCCATCCCTTCCGTTACAAGCACCAGAAGGAACTGTTCATCGCCGCTGAGGGTATGTACACTGGTCAGTTCGTGTACTGTGGGAAAAAGGCTAATCTTGTTGTTGGTAATGTGCTTCCCATTAGAGCCATTCCTGAAGGTGCTGTGGTTTGTAATGTTGAGCACCATGTTGGTGACCGAGGTGTGTTCGCTAGATGCTCTGGTGATTATGCTATTGTTATCAGCCACAACCCAGATAATGATACCAGCAGGTATATTTGGATTCGTGAACATGCTTTTGTTCTTCAGAATCGATGCATGTTTGTTGAAGGATTTGTGGGTTTTTTTGGCTTATTTGAGTGTGCTTGTGTAAATTATGGACTTTTATTACTTTCGTACATGGGATGTTTTTACAGATGGGTTTGACTTGAATATGGTTTTTCATTCTGAGATGGCAGATTTAAGATTTCTGATCTGGGTTACAGATTCCGTTTCTCTTTTATATTTAATTTTTATGTAATATTCTTTTACTTCAAGAATATGAAATGATCTATTATGTGAAATCGGTTTTTTGTTTACTAAAAGTTCCATTTGTTTTCAAATTGACAAGAAGTAATTAAATTGATGTCTTGGGGATAATCTTATTGGCACCGTGAAAAAATTTGTGTGAGAAGGATGGCTGGGAAGGAAGAGGATGATTTTTGAAGGAATCGGAGTTGAAAGTTTCATGAGACCGTAATACTTTTAGCTTTTCGGACTGCGTAGCGTAATTCTTTTGCAACTAATTCTTGTCAATTATTCCTAAAATGGATTTTTTTCAAACTCCTTTACGATGTTATGTGGTTTTTTCTCCTTTTTATAATTTCACTTGCTTGATGATAATGTCTTACTTCCTTCAAAAGAATATTGTTTTATCTGTGTCAAGGTAAACTTTAAAGGTGTTTTTTTGAGAGATGCCTATTGTTAGTTGCGACAACATCAATTTGAACGGTTTTTATTTTATCCTAGGAAAACTTACTCGTCTAGATTTTTAACTCCACATTTATATTTGCTTGCTGAGTGATTTGCCAGTGCTAGCTATCGTGGCATTCAGTTCTCTCAAGAAGGCACATGTAGAGCGCCCTCTTTGGTCTGATCCATATTTGTGTCAGGAAAAAAAGGGAAAAGGCTGAAGGAGATTAGTTTTTTGTGGTCACCTGCTGTTGTGTTTGTTTCAATTCAATTCTTACTATGGCGATGCCTTCATCTCAAAATGCTGTCCCTTGCAGGATTAAGCTACCATCTGGAGCCAAGAAGATTGTACCTAGCGGGTGCCGTGCTATGATCGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTCTTCTCAAGGCAGGTAATGCTTACCACAAGTTCCGTGTCAAGCGTAACTGCTGGCCCAAAGTACGTGGTGTTGCTATGAATCCAGTTGAACATCCCCATGGTGGTGGTAACCATCAACACATTGGTCACGCCAGTACTGTCCGCCGTGATGCCCCGCCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACTGGTCGGCTCCGAGGACAGGCTGCTGCTACTGCTGCGAAGGCCGACAAGGCTTAG

mRNA sequence

TCCTAAACCTGTATCCAAACACCCTATCTAGGGCAACCCATTAGTCATCTTCCTTTTCTCCTCTAAAAACCCTAATCCTCTTTCTATTTATCATAACACCGCCTGCGCCTCTCTTCCCCTTCCCCTTCCCCATATCCCCGAAAACCCTAATTCCCATCCTCCAATGGGTCGTGTTATCAGAGCACAACGTAAGGGAGCTGGATCAGTCTTCCGCTCTCACACTCACCACCGGAAGGGCGCTGCCCGTTTCCGCTCCCTCGACTTCGGCGAGCGAAATGGTTACCTGAAAGGTGTGGTCAGCGAAATCATTCACGATCCGGGCAGAGGTGCTCCGTTGGCCCGCGTTACTTTCCGCCATCCCTTCCGTTACAAGCACCAGAAGGAACTGTTCATCGCCGCTGAGGGTATGTACACTGGTCAGTTCGTGTACTGTGGGAAAAAGGCTAATCTTGTTGTTGGTAATGTGCTTCCCATTAGAGCCATTCCTGAAGGTGCTGTGGTTTGTAATGTTGAGCACCATGTTGGTGACCGAGGTGTGTTCGCTAGATGCTCTGGTGATTATGCTATTGTTATCAGCCACAACCCAGATAATGATACCAGCAGTTGTGTTTGTTTCAATTCAATTCTTACTATGGCGATGCCTTCATCTCAAAATGCTGTCCCTTGCAGGATTAAGCTACCATCTGGAGCCAAGAAGATTGTACCTAGCGGGTGCCGTGCTATGATCGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTCTTCTCAAGGCAGGTAATGCTTACCACAAGTTCCGTGTCAAGCGTAACTGCTGGCCCAAAGTACGTGGTGTTGCTATGAATCCAGTTGAACATCCCCATGGTGGTGGTAACCATCAACACATTGGTCACGCCAGTACTGTCCGCCGTGATGCCCCGCCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACTGGTCGGCTCCGAGGACAGGCTGCTGCTACTGCTGCGAAGGCCGACAAGGCTTAG

Coding sequence (CDS)

ATGGGTCGTGTTATCAGAGCACAACGTAAGGGAGCTGGATCAGTCTTCCGCTCTCACACTCACCACCGGAAGGGCGCTGCCCGTTTCCGCTCCCTCGACTTCGGCGAGCGAAATGGTTACCTGAAAGGTGTGGTCAGCGAAATCATTCACGATCCGGGCAGAGGTGCTCCGTTGGCCCGCGTTACTTTCCGCCATCCCTTCCGTTACAAGCACCAGAAGGAACTGTTCATCGCCGCTGAGGGTATGTACACTGGTCAGTTCGTGTACTGTGGGAAAAAGGCTAATCTTGTTGTTGGTAATGTGCTTCCCATTAGAGCCATTCCTGAAGGTGCTGTGGTTTGTAATGTTGAGCACCATGTTGGTGACCGAGGTGTGTTCGCTAGATGCTCTGGTGATTATGCTATTGTTATCAGCCACAACCCAGATAATGATACCAGCAGTTGTGTTTGTTTCAATTCAATTCTTACTATGGCGATGCCTTCATCTCAAAATGCTGTCCCTTGCAGGATTAAGCTACCATCTGGAGCCAAGAAGATTGTACCTAGCGGGTGCCGTGCTATGATCGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTCTTCTCAAGGCAGGTAATGCTTACCACAAGTTCCGTGTCAAGCGTAACTGCTGGCCCAAAGTACGTGGTGTTGCTATGAATCCAGTTGAACATCCCCATGGTGGTGGTAACCATCAACACATTGGTCACGCCAGTACTGTCCGCCGTGATGCCCCGCCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACTGGTCGGCTCCGAGGACAGGCTGCTGCTACTGCTGCGAAGGCCGACAAGGCTTAG

Protein sequence

MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

Homology

[Close]

BLAST of CcUC05G097020 vs. NCBI nr
Match: KAA0063480.1 (60S ribosomal protein L8 [Cucumis melo var. makuwa])

HSP 1 Score: 526.2 bits (1354), Expect = 1.8e-145
Identity = 267/296 (90.20%), Postives = 269/296 (90.88%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSSC--------------VCFNSILTMAMPSSQNAV 180
           GDRGVFARCSGDYAIVISHNPDNDTSS               +C  S       SSQN+V
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSSFFKKAHVELSHWSDHICVRS-------SSQNSV 180

Query: 181 PCRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAM 240
             RIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAM
Sbjct: 181 SGRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAM 240

Query: 241 NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 283
           NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Sbjct: 241 NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 289

[Close]

BLAST of CcUC05G097020 vs. NCBI nr
Match: XP_008454581.1 (PREDICTED: 60S ribosomal protein L8 [Cucumis melo] >XP_038899159.1 60S ribosomal protein L8 [Benincasa hispida])

HSP 1 Score: 516.9 bits (1330), Expect = 1.1e-142
Identity = 259/282 (91.84%), Postives = 259/282 (91.84%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIV 180
           GDRGVFARCSGDYAIVISHNPDNDTS                      RIKLPSGAKKIV
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTS----------------------RIKLPSGAKKIV 180

Query: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240
           PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH
Sbjct: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240

Query: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 283
           IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Sbjct: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of CcUC05G097020 vs. NCBI nr
Match: XP_004151970.1 (60S ribosomal protein L8 [Cucumis sativus] >KGN57945.1 hypothetical protein Csa_011442 [Cucumis sativus])

HSP 1 Score: 516.5 bits (1329), Expect = 1.4e-142
Identity = 258/282 (91.49%), Postives = 259/282 (91.84%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLP+RAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIV 180
           GDRGVFARCSGDYAIVISHNPDNDTS                      RIKLPSGAKKIV
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTS----------------------RIKLPSGAKKIV 180

Query: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240
           PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH
Sbjct: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240

Query: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 283
           IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Sbjct: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of CcUC05G097020 vs. NCBI nr
Match: XP_022139448.1 (60S ribosomal protein L8-like [Momordica charantia])

HSP 1 Score: 516.2 bits (1328), Expect = 1.8e-142
Identity = 258/281 (91.81%), Postives = 258/281 (91.81%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIV 180
           GDRGVFARCSGDYAIVISHNPDNDTS                      RIKLPSGAKKIV
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTS----------------------RIKLPSGAKKIV 180

Query: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240
           PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH
Sbjct: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240

Query: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK 282
           IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK
Sbjct: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK 259

[Close]

BLAST of CcUC05G097020 vs. NCBI nr
Match: KAG7015230.1 (60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 515.4 bits (1326), Expect = 3.1e-142
Identity = 257/282 (91.13%), Postives = 259/282 (91.84%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIV 180
           GDRGVFARCSGDYAIVISHNPDNDTS                      RIKLPSGAKKIV
Sbjct: 171 GDRGVFARCSGDYAIVISHNPDNDTS----------------------RIKLPSGAKKIV 230

Query: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240
           PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH
Sbjct: 231 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 290

Query: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 283
           IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATA+KADKA
Sbjct: 291 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATASKADKA 310

[Close]

BLAST of CcUC05G097020 vs. ExPASy Swiss-Prot
Match: P29766 (60S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 4.4e-139
Identity = 242/282 (85.82%), Postives = 255/282 (90.43%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKG ARFR+LDFGERNGYLKGV++E+IHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKA L+VGNVLP+R+IPEGAVVCNVEH V
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIV 180
           GDRGVFARCSGDYAIVISHNPDN T+                      R+KLPSGAKKIV
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNGTT----------------------RVKLPSGAKKIV 180

Query: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240
           PSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQH
Sbjct: 181 PSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240

Query: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 283
           IGHASTVRRDAPPGQKVGLIAARRTGRLRGQA ATAAKADKA
Sbjct: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQARATAAKADKA 260

[Close]

BLAST of CcUC05G097020 vs. ExPASy Swiss-Prot
Match: Q42064 (60S ribosomal protein L8-3 OS=Arabidopsis thaliana OX=3702 GN=RPL8C PE=2 SV=2)

HSP 1 Score: 485.0 bits (1247), Expect = 5.9e-136
Identity = 237/280 (84.64%), Postives = 252/280 (90.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKG A+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           V FRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAV+CNVEHHV
Sbjct: 61  VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIV 180
           GDRGVFAR SGDYAIVI+HNPDNDTS                      RIKLPSG+KKIV
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTS----------------------RIKLPSGSKKIV 180

Query: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240
           PSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQH
Sbjct: 181 PSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240

Query: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD 281
           IGHASTVRRDAPPG+KVGLIAARRTGRLRGQAAA A+KAD
Sbjct: 241 IGHASTVRRDAPPGKKVGLIAARRTGRLRGQAAALASKAD 258

[Close]

BLAST of CcUC05G097020 vs. ExPASy Swiss-Prot
Match: P25998 (60S ribosomal protein L8 OS=Nicotiana tabacum OX=4097 GN=RPL8 PE=2 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 1.7e-135
Identity = 237/282 (84.04%), Postives = 251/282 (89.01%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGR+IRAQRKGAGSVF+SHTHHRKG ARFRSLDFGERNGYLKGV++E+IHDPGRGAPLAR
Sbjct: 1   MGRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFR+PFRY HQKELF+AAEGMYTGQFVYCGKKA L+VGNVLP+R+IPEGAVVCNVEH V
Sbjct: 61  VTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIV 180
           GDRGVFARCSG YAIVISHNPDN T+                      RIKLPSG+KKIV
Sbjct: 121 GDRGVFARCSGAYAIVISHNPDNGTT----------------------RIKLPSGSKKIV 180

Query: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240
           PSGCR MIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQH
Sbjct: 181 PSGCRRMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240

Query: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 283
           IGHASTV RDAPPGQKVGLIA RRTGRLRGQAAATAAKADKA
Sbjct: 241 IGHASTVARDAPPGQKVGLIAGRRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of CcUC05G097020 vs. ExPASy Swiss-Prot
Match: P46286 (60S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2)

HSP 1 Score: 481.5 bits (1238), Expect = 6.6e-135
Identity = 237/280 (84.64%), Postives = 252/280 (90.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKG A+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIV 180
           GDRGV AR SGDYAIVI+HNPD+DT+                      RIKLPSG+KKIV
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTT----------------------RIKLPSGSKKIV 180

Query: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240
           PSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQH
Sbjct: 181 PSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQH 240

Query: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD 281
           IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAA+AAKAD
Sbjct: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAASAAKAD 258

[Close]

BLAST of CcUC05G097020 vs. ExPASy Swiss-Prot
Match: Q4PSL7 (60S ribosomal protein L8-2 OS=Arabidopsis thaliana OX=3702 GN=RPL8B PE=2 SV=3)

HSP 1 Score: 435.3 bits (1118), Expect = 5.4e-121
Identity = 215/281 (76.51%), Postives = 237/281 (84.34%), Query Frame = 0


Query: 1   MGRVIRAQRKG-AGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLA 60
           MGRVIRAQRKG AGSVF+SHTHHRKG A+FRSLD+GERNGYLKG+V+EIIHDPGRGAPLA
Sbjct: 1   MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60

Query: 61  RVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHH 120
           RV FRHPFRY  QKELF+AAEGMYTGQ++YCGKKANL+VGNVLP+ +IPEGAV+CNVE H
Sbjct: 61  RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120

Query: 121 VGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKI 180
           VGDRG  AR SGDYAIVI+HNP+++T+                      R+KLPSG+KKI
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTT----------------------RVKLPSGSKKI 180

Query: 181 VPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQ 240
           +PS CRAMIGQVAGGGRTEKPLLKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQ
Sbjct: 181 LPSACRAMIGQVAGGGRTEKPLLKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQ 240

Query: 241 HIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD 281
           HIGHASTVRRD   G KVG IAARRTGR RG AA  AAKAD
Sbjct: 241 HIGHASTVRRDKSAGAKVGQIAARRTGRRRGAAATLAAKAD 259

[Close]

BLAST of CcUC05G097020 vs. ExPASy TrEMBL
Match: A0A5A7V8H5 (60S ribosomal protein L8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold977G00700 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 8.6e-146
Identity = 267/296 (90.20%), Postives = 269/296 (90.88%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSSC--------------VCFNSILTMAMPSSQNAV 180
           GDRGVFARCSGDYAIVISHNPDNDTSS               +C  S       SSQN+V
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSSFFKKAHVELSHWSDHICVRS-------SSQNSV 180

Query: 181 PCRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAM 240
             RIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAM
Sbjct: 181 SGRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAM 240

Query: 241 NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 283
           NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Sbjct: 241 NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 289

[Close]

BLAST of CcUC05G097020 vs. ExPASy TrEMBL
Match: A0A1S3BYI5 (60S ribosomal protein L8 OS=Cucumis melo OX=3656 GN=LOC103494968 PE=3 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 5.2e-143
Identity = 259/282 (91.84%), Postives = 259/282 (91.84%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIV 180
           GDRGVFARCSGDYAIVISHNPDNDTS                      RIKLPSGAKKIV
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTS----------------------RIKLPSGAKKIV 180

Query: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240
           PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH
Sbjct: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240

Query: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 283
           IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Sbjct: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of CcUC05G097020 vs. ExPASy TrEMBL
Match: A0A0A0L7L1 (Ribosomal_L2_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G403970 PE=3 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 6.8e-143
Identity = 258/282 (91.49%), Postives = 259/282 (91.84%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLP+RAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIV 180
           GDRGVFARCSGDYAIVISHNPDNDTS                      RIKLPSGAKKIV
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTS----------------------RIKLPSGAKKIV 180

Query: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240
           PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH
Sbjct: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240

Query: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 283
           IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Sbjct: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of CcUC05G097020 vs. ExPASy TrEMBL
Match: A0A6J1CFM0 (60S ribosomal protein L8-like OS=Momordica charantia OX=3673 GN=LOC111010376 PE=3 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 8.9e-143
Identity = 258/281 (91.81%), Postives = 258/281 (91.81%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIV 180
           GDRGVFARCSGDYAIVISHNPDNDTS                      RIKLPSGAKKIV
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTS----------------------RIKLPSGAKKIV 180

Query: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240
           PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH
Sbjct: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240

Query: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK 282
           IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK
Sbjct: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK 259

[Close]

BLAST of CcUC05G097020 vs. ExPASy TrEMBL
Match: A0A6J1J2H3 (60S ribosomal protein L8 OS=Cucurbita maxima OX=3661 GN=LOC111480658 PE=3 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.5e-142
Identity = 257/282 (91.13%), Postives = 259/282 (91.84%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIV 180
           GDRGVFARCSGDYAIVISHNPDNDTS                      RIKLPSGAKKIV
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTS----------------------RIKLPSGAKKIV 180

Query: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240
           PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH
Sbjct: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240

Query: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 283
           IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATA+KADKA
Sbjct: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATASKADKA 260

[Close]

BLAST of CcUC05G097020 vs. TAIR 10
Match: AT4G36130.1 (Ribosomal protein L2 family )

HSP 1 Score: 485.0 bits (1247), Expect = 4.2e-137
Identity = 237/280 (84.64%), Postives = 252/280 (90.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKG A+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           V FRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAV+CNVEHHV
Sbjct: 61  VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIV 180
           GDRGVFAR SGDYAIVI+HNPDNDTS                      RIKLPSG+KKIV
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTS----------------------RIKLPSGSKKIV 180

Query: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240
           PSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQH
Sbjct: 181 PSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240

Query: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD 281
           IGHASTVRRDAPPG+KVGLIAARRTGRLRGQAAA A+KAD
Sbjct: 241 IGHASTVRRDAPPGKKVGLIAARRTGRLRGQAAALASKAD 258

[Close]

BLAST of CcUC05G097020 vs. TAIR 10
Match: AT2G18020.1 (Ribosomal protein L2 family )

HSP 1 Score: 481.5 bits (1238), Expect = 4.7e-136
Identity = 237/280 (84.64%), Postives = 252/280 (90.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKG A+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIV 180
           GDRGV AR SGDYAIVI+HNPD+DT+                      RIKLPSG+KKIV
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTT----------------------RIKLPSGSKKIV 180

Query: 181 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 240
           PSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQH
Sbjct: 181 PSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQH 240

Query: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD 281
           IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAA+AAKAD
Sbjct: 241 IGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAASAAKAD 258

[Close]

BLAST of CcUC05G097020 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family )

HSP 1 Score: 435.3 bits (1118), Expect = 3.8e-122
Identity = 215/281 (76.51%), Postives = 237/281 (84.34%), Query Frame = 0


Query: 1   MGRVIRAQRKG-AGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLA 60
           MGRVIRAQRKG AGSVF+SHTHHRKG A+FRSLD+GERNGYLKG+V+EIIHDPGRGAPLA
Sbjct: 1   MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60

Query: 61  RVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHH 120
           RV FRHPFRY  QKELF+AAEGMYTGQ++YCGKKANL+VGNVLP+ +IPEGAV+CNVE H
Sbjct: 61  RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120

Query: 121 VGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKI 180
           VGDRG  AR SGDYAIVI+HNP+++T+                      R+KLPSG+KKI
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTT----------------------RVKLPSGSKKI 180

Query: 181 VPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQ 240
           +PS CRAMIGQVAGGGRTEKPLLKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQ
Sbjct: 181 LPSACRAMIGQVAGGGRTEKPLLKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQ 240

Query: 241 HIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD 281
           HIGHASTVRRD   G KVG IAARRTGR RG AA  AAKAD
Sbjct: 241 HIGHASTVRRDKSAGAKVGQIAARRTGRRRGAAATLAAKAD 259

[Close]

BLAST of CcUC05G097020 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-19
Identity = 64/221 (28.96%), Postives = 97/221 (43.89%), Query Frame = 0


Query: 22  HRKGAAR--FRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAA 81
           HR G  +  +R +DF      + G +  I +DP R A +  + +        +K   +  
Sbjct: 51  HRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYG-----DGEKRYILHP 110

Query: 82  EGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISH 141
            G   G  +  G +  + +GN LP+  +P G  + N+E  +G  G  AR +G  A +I+ 
Sbjct: 111 RGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAK 170

Query: 142 NPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEK 201
              + T                        +KLPSG  +++   C A +GQV   G  +K
Sbjct: 171 EGKSAT------------------------LKLPSGEVRLISKNCSATVGQVGNVGVNQK 230

Query: 202 PLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 237
            L +AG+          CW    P VRGV MNPV+HPHGGG
Sbjct: 231 SLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGG 233

[Close]

BLAST of CcUC05G097020 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-19
Identity = 64/221 (28.96%), Postives = 97/221 (43.89%), Query Frame = 0


Query: 22  HRKGAAR--FRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAA 81
           HR G  +  +R +DF      + G +  I +DP R A +  + +        +K   +  
Sbjct: 51  HRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYG-----DGEKRYILHP 110

Query: 82  EGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISH 141
            G   G  +  G +  + +GN LP+  +P G  + N+E  +G  G  AR +G  A +I+ 
Sbjct: 111 RGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAK 170

Query: 142 NPDNDTSSCVCFNSILTMAMPSSQNAVPCRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEK 201
              + T                        +KLPSG  +++   C A +GQV   G  +K
Sbjct: 171 EGKSAT------------------------LKLPSGEVRLISKNCSATVGQVGNVGVNQK 230

Query: 202 PLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 237
            L +AG+          CW    P VRGV MNPV+HPHGGG
Sbjct: 231 SLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGG 233

The following BLAST results are available for this feature:

BLAST of CcUC05G097020 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063480.1	1.8e-145	90.20	60S ribosomal protein L8 [Cucumis melo var. makuwa]	[more]
XP_008454581.1	1.1e-142	91.84	PREDICTED: 60S ribosomal protein L8 [Cucumis melo] >XP_038899159.1 60S ribosomal...	[more]
XP_004151970.1	1.4e-142	91.49	60S ribosomal protein L8 [Cucumis sativus] >KGN57945.1 hypothetical protein Csa_...	[more]
XP_022139448.1	1.8e-142	91.81	60S ribosomal protein L8-like [Momordica charantia]	[more]
KAG7015230.1	3.1e-142	91.13	60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CcUC05G097020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29766	4.4e-139	85.82	60S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1	[more]
Q42064	5.9e-136	84.64	60S ribosomal protein L8-3 OS=Arabidopsis thaliana OX=3702 GN=RPL8C PE=2 SV=2	[more]
P25998	1.7e-135	84.04	60S ribosomal protein L8 OS=Nicotiana tabacum OX=4097 GN=RPL8 PE=2 SV=1	[more]
P46286	6.6e-135	84.64	60S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2	[more]
Q4PSL7	5.4e-121	76.51	60S ribosomal protein L8-2 OS=Arabidopsis thaliana OX=3702 GN=RPL8B PE=2 SV=3	[more]

BLAST of CcUC05G097020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V8H5	8.6e-146	90.20	60S ribosomal protein L8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3BYI5	5.2e-143	91.84	60S ribosomal protein L8 OS=Cucumis melo OX=3656 GN=LOC103494968 PE=3 SV=1	[more]
A0A0A0L7L1	6.8e-143	91.49	Ribosomal_L2_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G403...	[more]
A0A6J1CFM0	8.9e-143	91.81	60S ribosomal protein L8-like OS=Momordica charantia OX=3673 GN=LOC111010376 PE=...	[more]
A0A6J1J2H3	1.5e-142	91.13	60S ribosomal protein L8 OS=Cucurbita maxima OX=3661 GN=LOC111480658 PE=3 SV=1	[more]

BLAST of CcUC05G097020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36130.1	4.2e-137	84.64	Ribosomal protein L2 family	[more]
AT2G18020.1	4.7e-136	84.64	Ribosomal protein L2 family	[more]
AT3G51190.1	3.8e-122	76.51	Ribosomal protein L2 family	[more]
ATCG00830.1	2.1e-19	28.96	ribosomal protein L2	[more]
ATCG01310.1	2.1e-19	28.96	ribosomal protein L2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 96..253 e-value: 1.2E-64 score: 230.8
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 98..246 e-value: 2.6E-41 score: 140.7
IPR002171	Ribosomal protein L2	SMART	SM01383	Ribosomal_L2_2	coord: 11..90 e-value: 6.9E-34 score: 128.6
IPR002171	Ribosomal protein L2	PIRSF	PIRSF002158	RPL2p_RPL2a_RPL8e_RPL2o	coord: 155..277 e-value: 9.2E-33 score: 111.6 coord: 1..150 e-value: 8.3E-31 score: 105.2
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 1..147 coord: 164..282
IPR014726	Ribosomal protein L2, domain 3	GENE3D	4.10.950.10	Ribosomal protein L2, domain 3	coord: 192..269 e-value: 2.2E-43 score: 148.5
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 90..191 e-value: 3.6E-22 score: 80.0
None	No IPR available	GENE3D	2.40.50.140		coord: 1..86 e-value: 1.3E-40 score: 139.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..252
None	No IPR available	PANTHER	PTHR13691:SF48	60S RIBOSOMAL PROTEIN L8	coord: 1..147 coord: 164..282
IPR022666	Ribosomal Proteins L2, RNA binding domain	PFAM	PF00181	Ribosomal_L2	coord: 13..90 e-value: 5.1E-19 score: 68.0
IPR022671	Ribosomal protein L2, conserved site	PROSITE	PS00467	RIBOSOMAL_L2	coord: 219..230
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 99..268
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 1..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G097020.1	CcUC05G097020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome