CcUC05G096070 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G096070
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	C2H2-like zinc finger protein
Location	CicolChr05: 20507958 .. 20509501 (-)
RNA-Seq Expression	CcUC05G096070
Synteny	CcUC05G096070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTGTGTGTGGATGTCGGACACTACTCTCTCTGCAACGGATGGTTAGTGCTACCACTTCCTGTCCCTCCTTTTATCCAAATTCCTCAACAATATTTATATTCTCTCTTTTCTTTTTCCCATTTTTGCCCTCCTGTCCCTCCTTCTACCTTTTTTTCTTCTTTTAATCTTAAACCTTTCACATGCTACTTTCTATCTTTATCTTTCTTTTACTCAACTCTACAACTATCTATATTATTCCTTCTCTATAATACAATATTATCAAATTAATCACTGTTTCAAACTTATCAAATATTACTAAATCTAGCTTCTATGTTTTTTACAAATCCCCCCAAATCTGTTTATTATTTATATTTTGGTCACATTTTATTGATTGTTTTTTTTTTTTTTTTCCTAACCTAATAACAATATTGATTCACCCCTATATCAATGTGAAATCCTTAAAAATTTAGAAATATCGTTGCAAATTTAATACGATGAGTTTATTTAATCATTGATTCACCTCAAATTTGACATATAACTTGTTCGGTAGGAGTAGAATGAAGCTCATAATTTTGGGTGTACTCAATATCCCTATCACAAATAAAAGGGAAATTGGTTTTGGTTTTAGCTCATTTTTTTTTCCGGGTAATTAAGTATTCATTTTTACTTTTCGAAAGAAATGAAATTATATTTCAAATAAGTAAGTATGTCGTGGTTAAAACGAGTCAATCTATCGCATATAGGGCTTTAAGGAGACCGTATTTGTTATAAATTCAAGGCTTTAAGGAGACCGTATTTGTTTAAAATTGAATTTATGAAGGTGGAAGGGTTTATGAAGTTGGAAGAGAGTTGATTAATTAGTTTGATAGTTGAGAGGGTAATATTGTCCAACTAAGATCAACAAATCATTGCATTGATAATATTATTCCTCTGATGAGCCACAGCTTTTTTGAAAATTTTAAATCTGTTTTGCTCTCTTATAAATATCCCCATTCTATCGTCTTTCTGTTTGCTAATTTTCTACTACTACTACTTCTTCTTCTGCTTCCTCTTTCTCATTTTCTGTGGCTTCTTTATTCTTTTCAAAGCTCCTCATCAATGGCGGACCCAGGCATTTACGACTTCCTTAGCCAAACAACCACTCCTTCTAATTCATCATCCAAAGCTTCGAGAAAATCTCAGTCCCAATACTCTTCCTCTCGCATTTTTCCATGTCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGCCACCAAAATGCTCACAAGAGAGAAAGAGCCGCCTCTCGAAAGGCTTTCACCTCTGAAATTCTTCATCTCGGTTCCTTTCAACACTCGCCGCCGCCGACCATTACTCATCATCATCATCATCTTCCTACGCAGTATGCGCCAGCTCCGCCTCCGACTCCACCTGCTTTTCTCGACGACCATTGGTTTCATCAGAATCATTTCTGTGCTAACACCACCACCACCGCCTCGCCGGATGCTCTCTCTCCCAACACTGATGCCGCCGTTGAACATGTAACCATCGATCTCACTCTTCGCTTATAA

mRNA sequence

ATGGTCTCCTCATCAATGGCGGACCCAGGCATTTACGACTTCCTTAGCCAAACAACCACTCCTTCTAATTCATCATCCAAAGCTTCGAGAAAATCTCAGTCCCAATACTCTTCCTCTCGCATTTTTCCATGTCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGCCACCAAAATGCTCACAAGAGAGAAAGAGCCGCCTCTCGAAAGGCTTTCACCTCTGAAATTCTTCATCTCGGTTCCTTTCAACACTCGCCGCCGCCGACCATTACTCATCATCATCATCATCTTCCTACGCAGTATGCGCCAGCTCCGCCTCCGACTCCACCTGCTTTTCTCGACGACCATTGGTTTCATCAGAATCATTTCTGTGCTAACACCACCACCACCGCCTCGCCGGATGCTCTCTCTCCCAACACTGATGCCGCCGTTGAACATGTAACCATCGATCTCACTCTTCGCTTATAA

Coding sequence (CDS)

ATGGTCTCCTCATCAATGGCGGACCCAGGCATTTACGACTTCCTTAGCCAAACAACCACTCCTTCTAATTCATCATCCAAAGCTTCGAGAAAATCTCAGTCCCAATACTCTTCCTCTCGCATTTTTCCATGTCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGCCACCAAAATGCTCACAAGAGAGAAAGAGCCGCCTCTCGAAAGGCTTTCACCTCTGAAATTCTTCATCTCGGTTCCTTTCAACACTCGCCGCCGCCGACCATTACTCATCATCATCATCATCTTCCTACGCAGTATGCGCCAGCTCCGCCTCCGACTCCACCTGCTTTTCTCGACGACCATTGGTTTCATCAGAATCATTTCTGTGCTAACACCACCACCACCGCCTCGCCGGATGCTCTCTCTCCCAACACTGATGCCGCCGTTGAACATGTAACCATCGATCTCACTCTTCGCTTATAA

Protein sequence

MVSSSMADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPPTITHHHHHLPTQYAPAPPPTPPAFLDDHWFHQNHFCANTTTTASPDALSPNTDAAVEHVTIDLTLRL

Homology

[Close]

BLAST of CcUC05G096070 vs. NCBI nr
Match: XP_022934585.1 (protein LATE FLOWERING-like [Cucurbita moschata])

HSP 1 Score: 235.0 bits (598), Expect = 4.6e-58
Identity = 127/165 (76.97%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 6   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 65
           MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 66  RERAASRKAFTSEILHLGSFQHSPPPTITHHHHHLPTQYAPAPPPTP-----PA-FLDDH 125
           RERAASRKAF SEILHLGS    PPPT T  HHHLP  Y  AP PTP     PA FL  H
Sbjct: 61  RERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYTVAPSPTPTPTPAPADFLGQH 120

Query: 126 WFHQNHFCANTTTT------ASPDALSPNTDAAVEHVTIDLTLRL 159
           WF+QNH+ ANTTTT      ASPDALSPN D AVEHVTIDLTLRL
Sbjct: 121 WFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL 165

[Close]

BLAST of CcUC05G096070 vs. NCBI nr
Match: XP_022983390.1 (protein LATE FLOWERING-like [Cucurbita maxima])

HSP 1 Score: 226.9 bits (577), Expect = 1.2e-55
Identity = 127/163 (77.91%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 6   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 65
           MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 66  RERAASRKAFTSEILHLGSFQHSPPPTITHHHHHLPTQY--APAPPPTP-PA-FLDDHWF 125
           RERAASRKAF SEILHLGS     P T T  HHHLP  Y  APAP PTP PA FL  HWF
Sbjct: 61  RERAASRKAFASEILHLGSLP-PQPTTTTMTHHHLPQPYTVAPAPTPTPAPADFLGQHWF 120

Query: 126 HQNHFCANTTTT------ASPDALSPNTDAAVEHVTIDLTLRL 159
           +QNH+ ANTTTT      ASPDALSPN D AVEHVTIDLTLRL
Sbjct: 121 NQNHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL 162

[Close]

BLAST of CcUC05G096070 vs. NCBI nr
Match: KAG7017856.1 (Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226.9 bits (577), Expect = 1.2e-55
Identity = 127/175 (72.57%), Postives = 131/175 (74.86%), Query Frame = 0


Query: 6   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 65
           MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 66  RERAASRKAFTSEILHLGSFQHSPPP---TITHHHHHLPTQYAPAPPPTP---------P 125
           RERAASRKAF SEILHLGS    PPP   T T  HHHLP  Y  AP PTP         P
Sbjct: 61  RERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQPYTVAPAPTPIPTPTTTPAP 120

Query: 126 A-FLDDHWFHQNHFCANTTTT---------ASPDALSPNTDAAVEHVTIDLTLRL 159
           A FL  HWF+QNH+ ANTTTT         ASPDALSPN D AVEHVTIDLTLRL
Sbjct: 121 ADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL 175

[Close]

BLAST of CcUC05G096070 vs. NCBI nr
Match: XP_023529006.1 (protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.5 bits (576), Expect = 1.6e-55
Identity = 127/171 (74.27%), Postives = 132/171 (77.19%), Query Frame = 0


Query: 6   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 65
           MADP IYDFL+QTTT SNS++KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSATKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 66  RERAASRKAFTSEILHLGSFQHSPPPTITHHHHHLPTQY----APAPPPTP-----PA-F 125
           RERAASRKAF SEILHLGS    PPP  T  HHHLP  Y    AP P PTP     PA F
Sbjct: 61  RERAASRKAFASEILHLGSLPPPPPPPTT-AHHHLPQPYTVVPAPTPTPTPTTTPAPADF 120

Query: 126 LDDHWFHQNHFCANTTTT--------ASPDALSPNTDAAVEHVTIDLTLRL 159
           L  HWF+QNH+ ANTTTT        ASPDALSPN D AVEHVTIDLTLRL
Sbjct: 121 LGQHWFNQNHYSANTTTTTTTTTTASASPDALSPNADTAVEHVTIDLTLRL 170

[Close]

BLAST of CcUC05G096070 vs. NCBI nr
Match: KAG6581122.1 (Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 224.9 bits (572), Expect = 4.7e-55
Identity = 127/180 (70.56%), Postives = 131/180 (72.78%), Query Frame = 0


Query: 6   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 65
           MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 66  RERAASRKAFTSEILHLGSFQHSPPP---TITHHHHHLPTQYAPAPPPTP---------P 125
           RERAASRKAF SEILHLGS    PPP   T T  HHHLP  Y  AP PTP         P
Sbjct: 61  RERAASRKAFASEILHLGSLPPPPPPPTTTTTTTHHHLPQPYTVAPAPTPIPTPTTTPAP 120

Query: 126 A-FLDDHWFHQNHFCANTTTT--------------ASPDALSPNTDAAVEHVTIDLTLRL 159
           A FL  HWF+QNH+ ANTTTT              ASPDALSPN D AVEHVTIDLTLRL
Sbjct: 121 ADFLGQHWFNQNHYSANTTTTTTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL 180

[Close]

BLAST of CcUC05G096070 vs. ExPASy Swiss-Prot
Match: Q9FFX4 (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.6e-13
Identity = 44/82 (53.66%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 9  PGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRER 68
          P    F+    T S SS + S  S +  +S R+FPC YCPRKFYTSQALGGHQNAHKRER
Sbjct: 6  PSYLHFVGPAKTRS-SSKRHSFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRER 65

Query: 69 AASRKAFTSEILHLGSFQHSPP 91
          AA+R+       +LG   +SPP
Sbjct: 66 AAARR-------NLGVLANSPP 79

[Close]

BLAST of CcUC05G096070 vs. ExPASy Swiss-Prot
Match: Q9FKA9 (Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.6e-11
Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 26  SKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLGS 85
           SK + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A  + + ++   
Sbjct: 19  SKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNND 78

Query: 86  FQHSPPPTITH-HHHHLPTQYAPA 108
           F H+ P  ++    HHL     PA
Sbjct: 79  FLHTLPVFLSSPSQHHLTILGYPA 102

[Close]

BLAST of CcUC05G096070 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 16  SQTTTPSNSSSKASRKSQSQYS----SSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAS 75
           S  T P +S+S++S   Q Q      S R+F C YC RKFY+SQALGGHQNAHKRER  +
Sbjct: 55  SSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 114

[Close]

BLAST of CcUC05G096070 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.1e-09
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 22 SNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK 74
          S+SS+   +  Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Sbjct: 48 SSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 99

[Close]

BLAST of CcUC05G096070 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.0e-09
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 23 NSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA 75
          +SSS +S  S S     R+F C YC RKFY+SQALGGHQNAHK ER  ++K+
Sbjct: 33 SSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKS 84

[Close]

BLAST of CcUC05G096070 vs. ExPASy TrEMBL
Match: A0A6J1F843 (protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111441721 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.2e-58
Identity = 127/165 (76.97%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 6   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 65
           MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 66  RERAASRKAFTSEILHLGSFQHSPPPTITHHHHHLPTQYAPAPPPTP-----PA-FLDDH 125
           RERAASRKAF SEILHLGS    PPPT T  HHHLP  Y  AP PTP     PA FL  H
Sbjct: 61  RERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYTVAPSPTPTPTPAPADFLGQH 120

Query: 126 WFHQNHFCANTTTT------ASPDALSPNTDAAVEHVTIDLTLRL 159
           WF+QNH+ ANTTTT      ASPDALSPN D AVEHVTIDLTLRL
Sbjct: 121 WFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL 165

[Close]

BLAST of CcUC05G096070 vs. ExPASy TrEMBL
Match: A0A6J1J5R2 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111481997 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 6.0e-56
Identity = 127/163 (77.91%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 6   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 65
           MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 66  RERAASRKAFTSEILHLGSFQHSPPPTITHHHHHLPTQY--APAPPPTP-PA-FLDDHWF 125
           RERAASRKAF SEILHLGS     P T T  HHHLP  Y  APAP PTP PA FL  HWF
Sbjct: 61  RERAASRKAFASEILHLGSLP-PQPTTTTMTHHHLPQPYTVAPAPTPTPAPADFLGQHWF 120

Query: 126 HQNHFCANTTTT------ASPDALSPNTDAAVEHVTIDLTLRL 159
           +QNH+ ANTTTT      ASPDALSPN D AVEHVTIDLTLRL
Sbjct: 121 NQNHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL 162

[Close]

BLAST of CcUC05G096070 vs. ExPASy TrEMBL
Match: A0A6J1EJQ6 (protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111435120 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.6e-51
Identity = 116/158 (73.42%), Postives = 123/158 (77.85%), Query Frame = 0


Query: 6   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 65
           MADP IYDFLSQTT  ++     SRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 66  RERAASRKAFTSEILHLGSFQHS---PPPTITHHHHHLPTQYAPAPPPTPPAFLDDHWFH 125
           RERAASRKAFTSEILHLGS QHS   PPP  T+HH   P+  A A    P A  D+HWFH
Sbjct: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALA----PSALFDEHWFH 120

Query: 126 QNHFCANTTTT--ASPDALSPNTDAAVEHVTIDLTLRL 159
           QN+    TTTT  ASP+ LSPN DAAVEHVTIDLTLRL
Sbjct: 121 QNNHYRGTTTTASASPNDLSPNADAAVEHVTIDLTLRL 154

[Close]

BLAST of CcUC05G096070 vs. ExPASy TrEMBL
Match: A0A6J1JQI7 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111486586 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.3e-50
Identity = 115/160 (71.88%), Postives = 122/160 (76.25%), Query Frame = 0


Query: 6   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 65
           MADP IYDFLSQTT  ++     SRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 66  RERAASRKAFTSEILHLGSFQHS---PPPTITHHHHHLPTQYAPAPPPTPPAFLDDHWFH 125
           RERAASRK FTSEILHLGS QHS   PPP  T+HH   P+  A A    P A  D+HWFH
Sbjct: 61  RERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASPSATALA----PSALFDEHWFH 120

Query: 126 QNHFCANTTTT----ASPDALSPNTDAAVEHVTIDLTLRL 159
           QN+    TTTT    ASP+ LSPN DAAVEHVTIDLTLRL
Sbjct: 121 QNNHYRGTTTTASASASPNDLSPNADAAVEHVTIDLTLRL 156

[Close]

BLAST of CcUC05G096070 vs. ExPASy TrEMBL
Match: A0A0A0LDF1 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G509430 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 6.3e-45
Identity = 115/170 (67.65%), Postives = 128/170 (75.29%), Query Frame = 0


Query: 6   MADPGIYDFLSQTTT--PSNSSSKASR--KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQ 65
           MADP IYDFLSQTTT  PSN+S+   +   S+  +S SRIFPCLYCPRKFYTSQALGGHQ
Sbjct: 1   MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQ 60

Query: 66  NAHKRER-AASRKA---FTSEILHLG--SFQHSPPP----TITHHHHHLPTQYAPAPPPT 125
           NAHKRER AASRKA    T+EILHLG  S QHSPPP    TITHHHHHLP  + P   PT
Sbjct: 61  NAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPPTTITHHHHHLPPHFYPL--PT 120

Query: 126 PPAFLDDHW-FHQNHFCANTTTTASPDALSP--NTDAAVEHVTIDLTLRL 159
           PP+FLD H  FH N+FC N  T+ASPD LSP  +TD A+EH+ IDLTLRL
Sbjct: 121 PPSFLDHHHSFHHNNFCPN--TSASPDTLSPTNSTDPALEHLNIDLTLRL 166

[Close]

BLAST of CcUC05G096070 vs. TAIR 10
Match: AT5G14010.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 2.5e-14
Identity = 44/82 (53.66%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 9  PGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRER 68
          P    F+    T S SS + S  S +  +S R+FPC YCPRKFYTSQALGGHQNAHKRER
Sbjct: 6  PSYLHFVGPAKTRS-SSKRHSFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRER 65

Query: 69 AASRKAFTSEILHLGSFQHSPP 91
          AA+R+       +LG   +SPP
Sbjct: 66 AAARR-------NLGVLANSPP 79

[Close]

BLAST of CcUC05G096070 vs. TAIR 10
Match: AT5G48890.1 (C2H2-like zinc finger protein )

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-12
Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 26  SKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLGS 85
           SK + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A  + + ++   
Sbjct: 19  SKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNND 78

Query: 86  FQHSPPPTITH-HHHHLPTQYAPA 108
           F H+ P  ++    HHL     PA
Sbjct: 79  FLHTLPVFLSSPSQHHLTILGYPA 102

[Close]

BLAST of CcUC05G096070 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 64.7 bits (156), Expect = 7.6e-11
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 16  SQTTTPSNSSSKASRKSQSQYS----SSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAS 75
           S  T P +S+S++S   Q Q      S R+F C YC RKFY+SQALGGHQNAHKRER  +
Sbjct: 55  SSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 114

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BLAST of CcUC05G096070 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 62.8 bits (151), Expect = 2.9e-10
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 22 SNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK 74
          S+SS+   +  Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Sbjct: 48 SSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 99

[Close]

BLAST of CcUC05G096070 vs. TAIR 10
Match: AT5G57520.1 (zinc finger protein 2 )

HSP 1 Score: 62.0 bits (149), Expect = 5.0e-10
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 23 NSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA 75
          +SSS +S  S S     R+F C YC RKFY+SQALGGHQNAHK ER  ++K+
Sbjct: 33 SSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKS 84

The following BLAST results are available for this feature:

BLAST of CcUC05G096070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934585.1	4.6e-58	76.97	protein LATE FLOWERING-like [Cucurbita moschata]	[more]
XP_022983390.1	1.2e-55	77.91	protein LATE FLOWERING-like [Cucurbita maxima]	[more]
KAG7017856.1	1.2e-55	72.57	Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_023529006.1	1.6e-55	74.27	protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo]	[more]
KAG6581122.1	4.7e-55	70.56	Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CcUC05G096070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFX4	3.6e-13	53.66	Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1	[more]
Q9FKA9	2.6e-11	47.62	Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1	[more]
Q39263	1.1e-09	53.97	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q42485	4.1e-09	55.77	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39261	7.0e-09	57.69	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of CcUC05G096070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F843	2.2e-58	76.97	protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111441721 PE=4 S...	[more]
A0A6J1J5R2	6.0e-56	77.91	protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111481997 PE=4 SV=...	[more]
A0A6J1EJQ6	2.6e-51	73.42	protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111435120 PE=4 S...	[more]
A0A6J1JQI7	1.3e-50	71.88	protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111486586 PE=4 SV=...	[more]
A0A0A0LDF1	6.3e-45	67.65	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G509430 P...	[more]

BLAST of CcUC05G096070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14010.1	2.5e-14	53.66	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G48890.1	1.8e-12	47.62	C2H2-like zinc finger protein	[more]
AT1G66140.1	7.6e-11	53.97	zinc finger protein 4	[more]
AT1G80730.1	2.9e-10	55.77	zinc-finger protein 1	[more]
AT5G57520.1	5.0e-10	57.69	zinc finger protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 19..86 e-value: 8.3E-6 score: 27.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	PANTHER	PTHR45730	ZINC FINGER PROTEIN JAGGED	coord: 15..126
None	No IPR available	PANTHER	PTHR45730:SF50	OS12G0617001-LIKE PROTEIN	coord: 15..126
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 44..64
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 42..69 score: 10.595541
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 39..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G096070.1	CcUC05G096070.1	mRNA