Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAGGTTTTTCCCAAGCATTTCAAATCCTTCTCATCATCATCATCTTTCATTTTCCTCAACGAATTTCTCATTTCTCATCGCTTCAATCGCAGTTCTCTCCATCTTCGCGCTCGTGATTTTCCTCTGCACCTCTTCCAGAAAATCGAACAAATCGCAACGGAGGAATTTCGTGTCGAAGATGAATAGTAACATCAGTTCTAGGGCGATTTCAATGGCGAAGATGATTTCGTGGAGAAAAGTGGAGGCAGCCGATGAAGAAAGAGGAGATAGTGATTTGAGTGGTGAGGATGACGAAGAAGAAGAAGAGGTTTGGAGGAAGACTATTATTAGAGGTGAACGGTGTCGTCCGTTGGAATTTTCTGGTAAAATTGATTATGATTCTGATGGAAATTTGTTGAGTGATTCAAACAGGGAATTCAAATAA
mRNA sequence
ATGGCCAGGTTTTTCCCAAGCATTTCAAATCCTTCTCATCATCATCATCTTTCATTTTCCTCAACGAATTTCTCATTTCTCATCGCTTCAATCGCAGTTCTCTCCATCTTCGCGCTCGTGATTTTCCTCTGCACCTCTTCCAGAAAATCGAACAAATCGCAACGGAGGAATTTCGTGTCGAAGATGAATAGTAACATCAGTTCTAGGGCGATTTCAATGGCGAAGATGATTTCGTGGAGAAAAGTGGAGGCAGCCGATGAAGAAAGAGGAGATAGTGATTTGAGTGGTGAGGATGACGAAGAAGAAGAAGAGGTTTGGAGGAAGACTATTATTAGAGGTGAACGGTGTCGTCCGTTGGAATTTTCTGGTAAAATTGATTATGATTCTGATGGAAATTTGTTGAGTGATTCAAACAGGGAATTCAAATAA
Coding sequence (CDS)
ATGGCCAGGTTTTTCCCAAGCATTTCAAATCCTTCTCATCATCATCATCTTTCATTTTCCTCAACGAATTTCTCATTTCTCATCGCTTCAATCGCAGTTCTCTCCATCTTCGCGCTCGTGATTTTCCTCTGCACCTCTTCCAGAAAATCGAACAAATCGCAACGGAGGAATTTCGTGTCGAAGATGAATAGTAACATCAGTTCTAGGGCGATTTCAATGGCGAAGATGATTTCGTGGAGAAAAGTGGAGGCAGCCGATGAAGAAAGAGGAGATAGTGATTTGAGTGGTGAGGATGACGAAGAAGAAGAAGAGGTTTGGAGGAAGACTATTATTAGAGGTGAACGGTGTCGTCCGTTGGAATTTTCTGGTAAAATTGATTATGATTCTGATGGAAATTTGTTGAGTGATTCAAACAGGGAATTCAAATAA
Protein sequence
MARFFPSISNPSHHHHLSFSSTNFSFLIASIAVLSIFALVIFLCTSSRKSNKSQRRNFVSKMNSNISSRAISMAKMISWRKVEAADEERGDSDLSGEDDEEEEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSDSNREFK
Homology
BLAST of CcUC05G093790 vs. NCBI nr
Match:
KGN57848.1 (hypothetical protein Csa_010872 [Cucumis sativus])
HSP 1 Score: 197.6 bits (501), Expect = 7.3e-47
Identity = 116/151 (76.82%), Postives = 125/151 (82.78%), Query Frame = 0
Query: 1 MARFFPSISNPSHHHHLSFSSTNFSFLIASIAV-LSIFALVIFLCTSSRKSNKSQ--RRN 60
MAR FP+ISN SH HL F ST+FSFLI S +V LSIFAL+IFLCTSSRKSNKSQ R N
Sbjct: 1 MARPFPTISNLSHPLHLLFFSTHFSFLILSTSVILSIFALLIFLCTSSRKSNKSQQGRNN 60
Query: 61 FVSKMNSNISSRAISMAKMISWRKVEAADEERGDSDLSGE------DDEEEEEVWRKTII 120
FVSKMNSNISSRAISMAKMISWRKVEAA+EE + + G D +EEEEVWRKTII
Sbjct: 61 FVSKMNSNISSRAISMAKMISWRKVEAAEEEEEEEEERGSGGCDFIDKDEEEEVWRKTII 120
Query: 121 RGERCRPLEFSGKIDYDSDGNLLSDSNREFK 143
RGERCRPLEFSGKIDYDSDGNLL DSNR+FK
Sbjct: 121 RGERCRPLEFSGKIDYDSDGNLLCDSNRDFK 151
BLAST of CcUC05G093790 vs. NCBI nr
Match:
XP_038906595.1 (uncharacterized protein LOC120092546 [Benincasa hispida])
HSP 1 Score: 195.7 bits (496), Expect = 2.8e-46
Identity = 113/135 (83.70%), Postives = 119/135 (88.15%), Query Frame = 0
Query: 1 MARFFPSISNPSHHHH---LSFSSTNFSFLIASIAVLSIFALVIFLCTSSRKSNKS-QRR 60
MAR FPSISNPSHHHH L FSSTNFSFLI+SIAVLSIFALV+FLCTSSRKSNKS QRR
Sbjct: 1 MARLFPSISNPSHHHHHHLLPFSSTNFSFLISSIAVLSIFALVVFLCTSSRKSNKSQQRR 60
Query: 61 NFVSKMNSNISSRAISMAKMISWRKVEAADEE-----RGDSDLSGEDDEE-EEEVWRKTI 120
NFVSKMNSNISSRAISMAKMISWRKVEAADEE RG +LSG+D+EE EEEVWRKTI
Sbjct: 61 NFVSKMNSNISSRAISMAKMISWRKVEAADEEDEEERRGSCNLSGDDEEEDEEEVWRKTI 120
Query: 121 IRGERCRPLEFSGKI 126
IRGERCRPLEFS +
Sbjct: 121 IRGERCRPLEFSDSV 135
BLAST of CcUC05G093790 vs. NCBI nr
Match:
TYK22452.1 (hypothetical protein E5676_scaffold712G00010 [Cucumis melo var. makuwa])
HSP 1 Score: 189.9 bits (481), Expect = 1.5e-44
Identity = 111/148 (75.00%), Postives = 125/148 (84.46%), Query Frame = 0
Query: 1 MARFFPSISNPSHHHHLSFSSTNFSF-LIASIAVLSIFALVIFLCTSSRKSNKSQ--RRN 60
MAR FP+ISN SHH HL F ST+FSF ++++ +LSIFAL+IFLCTSS KSNKSQ +
Sbjct: 1 MARPFPTISNLSHHPHLLFFSTHFSFPILSTSTILSIFALLIFLCTSSTKSNKSQQGKTT 60
Query: 61 FVSKMNSNISSRAISMAKMISWRKVEAAD---EERGDSDLSGEDDEEEEEVWRKTIIRGE 120
FVSKMNSNISSRAISMAK+ISWRKVEAAD EERG S ++ E+EEEVWRKTIIRGE
Sbjct: 61 FVSKMNSNISSRAISMAKIISWRKVEAADELEEERGSG--SCDELEDEEEVWRKTIIRGE 120
Query: 121 RCRPLEFSGKIDYDSDGNLLSDSNREFK 143
RCRPLEFSGKIDYDSDGNLL DSNR+FK
Sbjct: 121 RCRPLEFSGKIDYDSDGNLLCDSNRDFK 146
BLAST of CcUC05G093790 vs. NCBI nr
Match:
KAG7036703.1 (hypothetical protein SDJN02_00323, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 183.7 bits (465), Expect = 1.1e-42
Identity = 110/150 (73.33%), Postives = 122/150 (81.33%), Query Frame = 0
Query: 1 MARFFPSISNPSHHHHLSFSSTNFSFLIASIAVLSIFALVIFLCTSSRKSNKS---QRRN 60
MA+ FPS SN H +HL FSS + L+ASIAVLSIFALVIFLCTSSRKS K Q+RN
Sbjct: 1 MAKPFPSFSN--HSYHLPFSSPS---LVASIAVLSIFALVIFLCTSSRKSKKPILLQQRN 60
Query: 61 FVSKMNSNISSRAISMAKMISWRKVEAADEERGDS-----DLSGEDDEEEEEVWRKTIIR 120
FV+K+NSNISSRAIS+AKMISWRKVEAADE+ G DLSG D+ ++EVWRKTIIR
Sbjct: 61 FVAKVNSNISSRAISIAKMISWRKVEAADEDEGGGGGGGFDLSG--DDYDDEVWRKTIIR 120
Query: 121 GERCRPLEFSGKIDYDSDGNLLSDSNREFK 143
GERCRPLEFSGKIDYDSDGNLL DS REFK
Sbjct: 121 GERCRPLEFSGKIDYDSDGNLLCDSKREFK 143
BLAST of CcUC05G093790 vs. NCBI nr
Match:
KAG6607004.1 (hypothetical protein SDJN03_00346, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 183.0 bits (463), Expect = 1.9e-42
Identity = 110/152 (72.37%), Postives = 122/152 (80.26%), Query Frame = 0
Query: 1 MARFFPSISNPSHHHHLSFSSTNFSFLIASIAVLSIFALVIFLCTSSRKSNKS---QRRN 60
MA+ FPS SN H +HL FSS + L+ASIAVLSIFALVIFLCTSSRKS K Q+RN
Sbjct: 1 MAKPFPSFSN--HSYHLPFSSPS---LVASIAVLSIFALVIFLCTSSRKSKKPILLQQRN 60
Query: 61 FVSKMNSNISSRAISMAKMISWRKVEAADEERGDS-------DLSGEDDEEEEEVWRKTI 120
FV+K+NSNISSRAIS+AKMISWRKVEAADE+ G DLSG D+ ++EVWRKTI
Sbjct: 61 FVAKVNSNISSRAISIAKMISWRKVEAADEDEGGGGGGGGGFDLSG--DDYDDEVWRKTI 120
Query: 121 IRGERCRPLEFSGKIDYDSDGNLLSDSNREFK 143
IRGERCRPLEFSGKIDYDSDGNLL DS REFK
Sbjct: 121 IRGERCRPLEFSGKIDYDSDGNLLCDSKREFK 145
BLAST of CcUC05G093790 vs. ExPASy TrEMBL
Match:
A0A0A0L7R8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G348940 PE=4 SV=1)
HSP 1 Score: 197.6 bits (501), Expect = 3.5e-47
Identity = 116/151 (76.82%), Postives = 125/151 (82.78%), Query Frame = 0
Query: 1 MARFFPSISNPSHHHHLSFSSTNFSFLIASIAV-LSIFALVIFLCTSSRKSNKSQ--RRN 60
MAR FP+ISN SH HL F ST+FSFLI S +V LSIFAL+IFLCTSSRKSNKSQ R N
Sbjct: 1 MARPFPTISNLSHPLHLLFFSTHFSFLILSTSVILSIFALLIFLCTSSRKSNKSQQGRNN 60
Query: 61 FVSKMNSNISSRAISMAKMISWRKVEAADEERGDSDLSGE------DDEEEEEVWRKTII 120
FVSKMNSNISSRAISMAKMISWRKVEAA+EE + + G D +EEEEVWRKTII
Sbjct: 61 FVSKMNSNISSRAISMAKMISWRKVEAAEEEEEEEEERGSGGCDFIDKDEEEEVWRKTII 120
Query: 121 RGERCRPLEFSGKIDYDSDGNLLSDSNREFK 143
RGERCRPLEFSGKIDYDSDGNLL DSNR+FK
Sbjct: 121 RGERCRPLEFSGKIDYDSDGNLLCDSNRDFK 151
BLAST of CcUC05G093790 vs. ExPASy TrEMBL
Match:
A0A5D3DFS8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold712G00010 PE=4 SV=1)
HSP 1 Score: 189.9 bits (481), Expect = 7.4e-45
Identity = 111/148 (75.00%), Postives = 125/148 (84.46%), Query Frame = 0
Query: 1 MARFFPSISNPSHHHHLSFSSTNFSF-LIASIAVLSIFALVIFLCTSSRKSNKSQ--RRN 60
MAR FP+ISN SHH HL F ST+FSF ++++ +LSIFAL+IFLCTSS KSNKSQ +
Sbjct: 1 MARPFPTISNLSHHPHLLFFSTHFSFPILSTSTILSIFALLIFLCTSSTKSNKSQQGKTT 60
Query: 61 FVSKMNSNISSRAISMAKMISWRKVEAAD---EERGDSDLSGEDDEEEEEVWRKTIIRGE 120
FVSKMNSNISSRAISMAK+ISWRKVEAAD EERG S ++ E+EEEVWRKTIIRGE
Sbjct: 61 FVSKMNSNISSRAISMAKIISWRKVEAADELEEERGSG--SCDELEDEEEVWRKTIIRGE 120
Query: 121 RCRPLEFSGKIDYDSDGNLLSDSNREFK 143
RCRPLEFSGKIDYDSDGNLL DSNR+FK
Sbjct: 121 RCRPLEFSGKIDYDSDGNLLCDSNRDFK 146
BLAST of CcUC05G093790 vs. ExPASy TrEMBL
Match:
A0A5A7V4T5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00580 PE=4 SV=1)
HSP 1 Score: 125.6 bits (314), Expect = 1.7e-25
Identity = 69/84 (82.14%), Postives = 74/84 (88.10%), Query Frame = 0
Query: 62 MNSNISSRAISMAKMISWRKVEAAD---EERGDSDLSGEDDEEEEEVWRKTIIRGERCRP 121
MNSNISSRAISMAK+ISWRKVEAAD EERG S ++ E+EEEVWRKTIIRGERCRP
Sbjct: 1 MNSNISSRAISMAKIISWRKVEAADELEEERGSG--SCDELEDEEEVWRKTIIRGERCRP 60
Query: 122 LEFSGKIDYDSDGNLLSDSNREFK 143
LEFSGKIDYDSDGNLL DSNR+FK
Sbjct: 61 LEFSGKIDYDSDGNLLCDSNRDFK 82
BLAST of CcUC05G093790 vs. ExPASy TrEMBL
Match:
A0A5E4G755 (PREDICTED: LOC100277003 OS=Prunus dulcis OX=3755 GN=ALMOND_2B003044 PE=4 SV=1)
HSP 1 Score: 122.1 bits (305), Expect = 1.9e-24
Identity = 76/147 (51.70%), Postives = 96/147 (65.31%), Query Frame = 0
Query: 6 PSISNPSHH--HHLSFSSTNFSFLIASIAVLSIFALVIFLCTSSRKSNKSQRR------- 65
PS S SHH H S FL A I S+F+LVIFLC +SRKS KS ++
Sbjct: 7 PSFSMASHHLFQHQS------HFLFALIVFFSMFSLVIFLC-ASRKSKKSHKKKEEAITN 66
Query: 66 ------NFVSKMNSNISSRAISMAKMISWRKVEAADEERGDSDLSGEDDEEEEEVWRKTI 125
F++K+NS ISS+A++MAKM+SWRK+EA +E++ D D +DD +E VWRK+I
Sbjct: 67 SESKDAKFIAKLNSKISSKALAMAKMVSWRKMEAGEEDQKDDD---DDDHSDEAVWRKSI 126
Query: 126 IRGERCRPLEFSGKIDYDSDGNLLSDS 138
I GERC PL FSGKIDYDSDGNL +S
Sbjct: 127 IMGERCAPLNFSGKIDYDSDGNLQPES 143
BLAST of CcUC05G093790 vs. ExPASy TrEMBL
Match:
A0A6J5WQZ0 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS21513 PE=4 SV=1)
HSP 1 Score: 114.4 bits (285), Expect = 3.9e-22
Identity = 77/172 (44.77%), Postives = 101/172 (58.72%), Query Frame = 0
Query: 6 PSISNPSHH--HHLSFSSTNFSFLIASIAVLSIFALVIFLCTS--SRKSN---------- 65
PS S SHH H S FL A I + S+F+L+IFLC S S+KSN
Sbjct: 7 PSFSMASHHLFQHPS------HFLFAPIVIFSMFSLLIFLCASHKSKKSNEKKEEAITNS 66
Query: 66 KSQRRNFVSKMNSNISSRAISMAKMISWRKVEAADEERGDSD--------------LSGE 125
+S+ F++K+NS ISS+A++MAKM+SWRK+EA +E++ D D + GE
Sbjct: 67 ESKDAKFIAKLNSKISSKALAMAKMVSWRKMEAGEEDQKDDDDDDHSDEAVWRKSIIMGE 126
Query: 126 ------------DDEEEEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSDS 138
DD+ +E VWRK+II GERC PL FSGKIDYDS+GNLL +S
Sbjct: 127 RCTPLNDDDDDDDDDRDEAVWRKSIIMGERCAPLNFSGKIDYDSEGNLLPES 172
BLAST of CcUC05G093790 vs. TAIR 10
Match:
AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 41.2 bits (95), Expect = 8.1e-04
Identity = 26/77 (33.77%), Postives = 47/77 (61.04%), Query Frame = 0
Query: 61 KMNSNISSRAISMAKMISWRKVEAAD---EERGDSDLSGEDDEEEEEVWRKTIIRGERCR 120
++ + +S++A++M RK +A D ++ ++ E+DEEE VW++ I+ G +C
Sbjct: 90 ELYTTLSNKAMTMV----GRKNKAYDGGPTKKTAVEMVMEEDEEEYGVWQREILMGGKCE 149
Query: 121 PLEFSGKIDYDSDGNLL 135
PL++SG I YD G+ L
Sbjct: 150 PLDYSGVIYYDCSGHQL 162
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN57848.1 | 7.3e-47 | 76.82 | hypothetical protein Csa_010872 [Cucumis sativus] | [more] |
| XP_038906595.1 | 2.8e-46 | 83.70 | uncharacterized protein LOC120092546 [Benincasa hispida] | [more] |
| TYK22452.1 | 1.5e-44 | 75.00 | hypothetical protein E5676_scaffold712G00010 [Cucumis melo var. makuwa] | [more] |
| KAG7036703.1 | 1.1e-42 | 73.33 | hypothetical protein SDJN02_00323, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6607004.1 | 1.9e-42 | 72.37 | hypothetical protein SDJN03_00346, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L7R8 | 3.5e-47 | 76.82 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G348940 PE=4 SV=1 | [more] |
| A0A5D3DFS8 | 7.4e-45 | 75.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7V4T5 | 1.7e-25 | 82.14 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5E4G755 | 1.9e-24 | 51.70 | PREDICTED: LOC100277003 OS=Prunus dulcis OX=3755 GN=ALMOND_2B003044 PE=4 SV=1 | [more] |
| A0A6J5WQZ0 | 3.9e-22 | 44.77 | Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS21513 PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G18560.1 | 8.1e-04 | 33.77 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
