Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAATTTACATTTAGGAATGGAGCTTTGGCTCTTGTTCTGGCATTGCTGGTTGTAGGATTGGCTGAAAGCAGAAAGTTGGAGAAGGAGACGCTTGGTGGTGGCGTTGGGCTTGGAGGTGGAGCTGGAGGCGGCCTTGGTCTTGGTTTTGGAGGTGGGCATGGAGGTGGATTAGGAGGCGGAGTTGGTGGTGGAGGTGGCTTAGGAGGAGGAGGTGGATTAGGAGGCGGAGCTGGTGGCGGGGGTGGATTAGGAGGAGGAGGTGGATTAGGAGGCGGAGCTGGAGGTGGATTTGGAGGCGGAGCTGGAGCTGGAGGTGGAGCTGGAGGTGGATTTGGAGATGGTAAGGGGGGTGGATTCGGAGGCGGAGTTGGTGGCGGAGCTGGAGGTGGAGCTGGAGGTGGATTTGGAGGTGGTAAGGGAGGTGGATTCGGAGGCGGAGCTGGCGGCGGAGCTGGTGGCGGAGCGGGAGGTGGATTTGGAGGTGGTAAGGGAGGCGGGTTTGGCGGCGGAGCAGGAAGTGGAGCTGGTGGTGGAGCAGGAGGTGGATTTGGAGGCGGAGCTGGCGGTGGAGCTGGTGGCGGAGCGGGAGGTGGATTTGGAGGCGGAGCTGGTGGTGGAGCAGGAGGTGGATTTGGAGGCGGAGCTGGAGGTGGCCATGGAGGCGGAGCAGGAGGTGGTTTCGGAGGTGGCAAAGGAGGTGGATTTGGAGGCGGAGCAGGTGGTGGTTTTGGGGGTCGAGCAGGTGGAGGAGGAGGCTTTGGCGGCGGTTCCGGGGGAGGAATCGGTGGCAGAATCTAA
mRNA sequence
ATGGCCAAATTTACATTTAGGAATGGAGCTTTGGCTCTTGTTCTGGCATTGCTGGTTGTAGGATTGGCTGAAAGCAGAAAGTTGGAGAAGGAGACGCTTGGTGGTGGCGTTGGGCTTGGAGGTGGAGCTGGAGGCGGCCTTGGTCTTGGTTTTGGAGGTGGGCATGGAGGTGGATTAGGAGGCGGAGTTGGTGGTGGAGGTGGCTTAGGAGGAGGAGGTGGATTAGGAGGCGGAGCTGGTGGCGGGGGTGGATTAGGAGGAGGAGGTGGATTAGGAGGCGGAGCTGGAGGTGGATTTGGAGGCGGAGCTGGAGCTGGAGGTGGAGCTGGAGGTGGATTTGGAGATGGTAAGGGGGGTGGATTCGGAGGCGGAGTTGGTGGCGGAGCTGGAGGTGGAGCTGGAGGTGGATTTGGAGGTGGTAAGGGAGGTGGATTCGGAGGCGGAGCTGGCGGCGGAGCTGGTGGCGGAGCGGGAGGTGGATTTGGAGGTGGTAAGGGAGGCGGGTTTGGCGGCGGAGCAGGAAGTGGAGCTGGTGGTGGAGCAGGAGGTGGATTTGGAGGCGGAGCTGGCGGTGGAGCTGGTGGCGGAGCGGGAGGTGGATTTGGAGGCGGAGCTGGTGGTGGAGCAGGAGGTGGATTTGGAGGCGGAGCTGGAGGTGGCCATGGAGGCGGAGCAGGAGGTGGTTTCGGAGGTGGCAAAGGAGGTGGATTTGGAGGCGGAGCAGGTGGTGGTTTTGGGGGTCGAGCAGGTGGAGGAGGAGGCTTTGGCGGCGGTTCCGGGGGAGGAATCGGTGGCAGAATCTAA
Coding sequence (CDS)
ATGGCCAAATTTACATTTAGGAATGGAGCTTTGGCTCTTGTTCTGGCATTGCTGGTTGTAGGATTGGCTGAAAGCAGAAAGTTGGAGAAGGAGACGCTTGGTGGTGGCGTTGGGCTTGGAGGTGGAGCTGGAGGCGGCCTTGGTCTTGGTTTTGGAGGTGGGCATGGAGGTGGATTAGGAGGCGGAGTTGGTGGTGGAGGTGGCTTAGGAGGAGGAGGTGGATTAGGAGGCGGAGCTGGTGGCGGGGGTGGATTAGGAGGAGGAGGTGGATTAGGAGGCGGAGCTGGAGGTGGATTTGGAGGCGGAGCTGGAGCTGGAGGTGGAGCTGGAGGTGGATTTGGAGATGGTAAGGGGGGTGGATTCGGAGGCGGAGTTGGTGGCGGAGCTGGAGGTGGAGCTGGAGGTGGATTTGGAGGTGGTAAGGGAGGTGGATTCGGAGGCGGAGCTGGCGGCGGAGCTGGTGGCGGAGCGGGAGGTGGATTTGGAGGTGGTAAGGGAGGCGGGTTTGGCGGCGGAGCAGGAAGTGGAGCTGGTGGTGGAGCAGGAGGTGGATTTGGAGGCGGAGCTGGCGGTGGAGCTGGTGGCGGAGCGGGAGGTGGATTTGGAGGCGGAGCTGGTGGTGGAGCAGGAGGTGGATTTGGAGGCGGAGCTGGAGGTGGCCATGGAGGCGGAGCAGGAGGTGGTTTCGGAGGTGGCAAAGGAGGTGGATTTGGAGGCGGAGCAGGTGGTGGTTTTGGGGGTCGAGCAGGTGGAGGAGGAGGCTTTGGCGGCGGTTCCGGGGGAGGAATCGGTGGCAGAATCTAA
Protein sequence
MAKFTFRNGALALVLALLVVGLAESRKLEKETLGGGVGLGGGAGGGLGLGFGGGHGGGLGGGVGGGGGLGGGGGLGGGAGGGGGLGGGGGLGGGAGGGFGGGAGAGGGAGGGFGDGKGGGFGGGVGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAGSGAGGGAGGGFGGGAGGGAGGGAGGGFGGGAGGGAGGGFGGGAGGGHGGGAGGGFGGGKGGGFGGGAGGGFGGRAGGGGGFGGGSGGGIGGRI
Homology
BLAST of CcUC05G088910 vs. NCBI nr
Match:
XP_038889055.1 (glycine-rich cell wall structural protein-like isoform X1 [Benincasa hispida])
HSP 1 Score: 150.6 bits (379), Expect = 1.9e-32
Identity = 230/267 (86.14%), Postives = 232/267 (86.89%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAESRKLEKETLGGGVGLGGGAGGGLGLGFGGGHGGGLG 60
M F FRNGALALVL LLVVGLAESRKLEKETLGGG GLGGGAGGGLGLG G GGG G
Sbjct: 20 MTNFRFRNGALALVLVLLVVGLAESRKLEKETLGGGGGLGGGAGGGLGLGL--GFGGGHG 79
Query: 61 GGVGGGGGLGGGGGLGGGAGGGGGLGGGGGLGGGAGGGFGGGAGAGGGAGGGFGDGKGGG 120
GG+GGGGGLGGGGGLGGGAGGGGGLGGGGGLGGG G G G G GAGGGAGGG G G GGG
Sbjct: 80 GGLGGGGGLGGGGGLGGGAGGGGGLGGGGGLGGGGGAGGGFGGGAGGGAGGGAGGGVGGG 139
Query: 121 FGGGVGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAGSGAGGG 180
GGG GGG GGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGG GAGGG
Sbjct: 140 AGGGAGGGFGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGG----GAGGG 199
Query: 181 AGGGFGGGAGGGAGGGAGGGFGGGAGGGAGGGFGGGAGGGHGGGAGGGFGGGKGGGFGGG 240
AGGG GGGAGGGAGGGAGGGF GGG GGGFGGG GGGHGGG GGGFGGGKGGGFGGG
Sbjct: 200 AGGGAGGGAGGGAGGGAGGGF----GGGKGGGFGGGVGGGHGGGVGGGFGGGKGGGFGGG 259
Query: 241 AGGGFGGRAGGGGGFGGGSGGGIGGRI 268
AGGGFGG AGGGGG GGGSGGGIGGR+
Sbjct: 260 AGGGFGGGAGGGGGVGGGSGGGIGGRV 276
BLAST of CcUC05G088910 vs. NCBI nr
Match:
XP_038889077.1 (glycine-rich cell wall structural protein-like isoform X2 [Benincasa hispida])
HSP 1 Score: 133.7 bits (335), Expect = 2.4e-27
Identity = 209/267 (78.28%), Postives = 211/267 (79.03%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAESRKLEKETLGGGVGLGGGAGGGLGLGFGGGHGGGLG 60
M F FRNGALALVL LLVVGLAESRKLEKETLGGG GLGGGAGGGLGLG G GGG G
Sbjct: 20 MTNFRFRNGALALVLVLLVVGLAESRKLEKETLGGGGGLGGGAGGGLGLGL--GFGGGHG 79
Query: 61 GGVGGGGGLGGGGGLGGGAGGGGGLGGGGGLGGGAGGGFGGGAGAGGGAGGGFGDGKGGG 120
GG+GGGGGLGGGGGLGGGAGGGGGLGG G GGG
Sbjct: 80 GGLGGGGGLGGGGGLGGGAGGGGGLGG----------------------------GVGGG 139
Query: 121 FGGGVGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAGSGAGGG 180
GGG GGG GGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGG GAGGG
Sbjct: 140 AGGGAGGGFGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGG----GAGGG 199
Query: 181 AGGGFGGGAGGGAGGGAGGGFGGGAGGGAGGGFGGGAGGGHGGGAGGGFGGGKGGGFGGG 240
AGGG GGGAGGGAGGGAGGGF GGG GGGFGGG GGGHGGG GGGFGGGKGGGFGGG
Sbjct: 200 AGGGAGGGAGGGAGGGAGGGF----GGGKGGGFGGGVGGGHGGGVGGGFGGGKGGGFGGG 248
Query: 241 AGGGFGGRAGGGGGFGGGSGGGIGGRI 268
AGGGFGG AGGGGG GGGSGGGIGGR+
Sbjct: 260 AGGGFGGGAGGGGGVGGGSGGGIGGRV 248
BLAST of CcUC05G088910 vs. NCBI nr
Match:
XP_023526914.1 (glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 125.2 bits (313), Expect = 8.6e-25
Identity = 223/279 (79.93%), Postives = 230/279 (82.44%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAESRKLEKETLGGGV------GLGGGAGGGLGLGFGGG 60
MAK T++ G LALVLA L+VG AESRKLEKETLGGG+ G GGGAG G G G GGG
Sbjct: 1 MAKITYKVGGLALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGAGGGLGGG 60
Query: 61 HGGGLGGGVGGGGGLGGGGGLGGGAGG------GGGLGGGGGLGGGAGGGFGGGAGAGGG 120
GGG GGG+GGGGGLGGGGGLGGGAGG GGG+GGGGGLGGGAGGGFGG G GGG
Sbjct: 61 FGGGHGGGLGGGGGLGGGGGLGGGAGGGFGGGHGGGIGGGGGLGGGAGGGFGG--GKGGG 120
Query: 121 AGGGFGDGKGGGFGGGVGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGG 180
GGG G G GGG GGG GGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGG
Sbjct: 121 FGGGAGGGAGGGAGGGFGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGA--- 180
Query: 181 FGGGAGSGAGGGAGGGFGGGAGGGAGGGAGGGFGGGAGGGAGGGFGGGAGGGHGGGAGGG 240
GGGAG GAGGG GGG GGGAGGG GGGAGGGFGGGAGGGAGGGFGGGAGGG GGG GGG
Sbjct: 181 -GGGAGGGAGGGFGGGHGGGAGGGFGGGAGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGG 240
Query: 241 FGGGKGGGFGGGAGGGFGGRAGGGGGFGGGSGGGIGGRI 268
GGG GGGFGGG GGGFGG AGGGGGFGGGSGGG GGR+
Sbjct: 241 HGGGAGGGFGGGKGGGFGGGAGGGGGFGGGSGGGFGGRV 273
BLAST of CcUC05G088910 vs. NCBI nr
Match:
KAG6582166.1 (hypothetical protein SDJN03_22168, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 115.9 bits (289), Expect = 5.2e-22
Identity = 219/273 (80.22%), Postives = 226/273 (82.78%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAESRKLEKETLGGGV--GLGGGAGGGLGL--GFGGGHG 60
MAK T++ GALALVLA L+VG AESRKLEKETLGGG+ G GGG GGG G G GGG G
Sbjct: 1 MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGGGLGGGFG 60
Query: 61 GGLGGGVGGGGGLGGGGGLGGGAGGGGGLGGGGGLGGGAGGGFGGGAGA--GGGAGGGFG 120
GG GGG+GGGGGLGGGGGLGGGAGGG G G GGG+G G GGG GGGAG GGG GGGFG
Sbjct: 61 GGHGGGLGGGGGLGGGGGLGGGAGGGFGGGHGGGIGLGGGGGLGGGAGGGFGGGKGGGFG 120
Query: 121 DGKGGGFGGGVGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAG 180
GKGGGFGGG GGGAGGG GGG GGG GGGFGGG GGG GGGAGGG GGG GGGFGGGAG
Sbjct: 121 GGKGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGAG 180
Query: 181 SGAGGGAGGGFGGGAGGGAGGGAGGGFGGGAGGGAGGGFGGGAGGGHGGGAGGGFGGGKG 240
GAGGGAGGGF GGG GGGAGGGFGGGAGGGAGGGFGGGAGGG GGG GGG GGG G
Sbjct: 181 GGAGGGAGGGF----GGGHGGGAGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGAG 240
Query: 241 GGFGGGAGGGFGGRAGGGGGFGGGSGGGIGGRI 268
GGFGGG GGGFGG AGGGGGFGGGSGGG GGR+
Sbjct: 241 GGFGGGKGGGFGGGAGGGGGFGGGSGGGFGGRV 269
BLAST of CcUC05G088910 vs. NCBI nr
Match:
XP_022955577.1 (glycine-rich cell wall structural protein 1.8-like isoform X3 [Cucurbita moschata])
HSP 1 Score: 114.8 bits (286), Expect = 1.2e-21
Identity = 229/293 (78.16%), Postives = 235/293 (80.20%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAESRKLEKETLGGGV--------GLGGGAGGGLGLGFG 60
MAK T++ GALALVLA L+VG AESRKLEKETLGGG+ G G GAGGGLG GFG
Sbjct: 1 MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGGGLGGGFG 60
Query: 61 GGHGGGL--GGGVGGGGGLGG------GGGLGGGAGGGGGLGGGGGLGGGAGGGFGGGA- 120
GGHGGGL GGG+GGGGGLGG GGG GGG GGGGGLGGGGGLGGGAGGG GGGA
Sbjct: 61 GGHGGGLGGGGGLGGGGGLGGGAGGGFGGGHGGGIGGGGGLGGGGGLGGGAGGGAGGGAG 120
Query: 121 -----GAGGGAGGGFGDGKGGGFGGGVGGGAGGGAGGGF----GGGKGGGFGGGAGGGAG 180
GAGGGAGGGFG GKGGGFGGG GGGAGGGAGGGF GGG GGGFGGG GGGAG
Sbjct: 121 GGFGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGAG 180
Query: 181 GGAGGGFGGGKGGGFGGGAGSGAGGGAGGGFGGGAGGGAGGGAGGGFGGGAGGGAGGGFG 240
GG GGG GGG GGGFGGGAG GAGGG GGG GGG GGG GGG GGGFGGGAGGGAGGGFG
Sbjct: 181 GGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGVGGGFGGGKGGGFGGGAGGGAGGGFG 240
Query: 241 GGAGGGHGGGAGGGFGGGKGGGFGGGAGGGFGGRAGG--GGGFGGGSGGGIGG 266
GGAGGG GGG GGG GGG GGGFGGG GGGFGG AGG GGGFGGG+GGG GG
Sbjct: 241 GGAGGGAGGGFGGGHGGGVGGGFGGGKGGGFGGGAGGGAGGGFGGGAGGGAGG 293
BLAST of CcUC05G088910 vs. ExPASy Swiss-Prot
Match:
P27483 (Glycine-rich cell wall structural protein OS=Arabidopsis thaliana OX=3702 GN=At3g17050 PE=3 SV=2)
HSP 1 Score: 63.2 bits (152), Expect = 5.3e-09
Identity = 194/244 (79.51%), Postives = 198/244 (81.15%), Query Frame = 0
Query: 34 GGGVGLGGGAGGGLGLGFGGGHGGGLGGGVGG--GGGLGG--GGGLGGGAGGGGGLGG-- 93
G G G+GGGAGGG G G GGGHGGG+GGG GG GGGLGG GGG GGGAGGGGGLGG
Sbjct: 104 GHGGGIGGGAGGGAGGGLGGGHGGGIGGGAGGGSGGGLGGGIGGGAGGGAGGGGGLGGGH 163
Query: 94 GGGLGGGAGGGFGG------GAGAGGGAGGGFGDGKGGGFGGGVGGGAGGGAGGGFGGGK 153
GGG+GGGAGGG GG G G GGGAGGG G G GGG GGG GGGAGGG G G GGG
Sbjct: 164 GGGIGGGAGGGAGGGLGGGHGGGIGGGAGGGSGGGLGGGIGGGAGGGAGGGGGAGGGGGL 223
Query: 154 GGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAGSGAGGGAGGGFGGGAGGGAGGGAGGGF 213
GGG GGG GGGAGGG GGG GGG GGGFGGGAG GAGGGAGGGFGGGAGGGAGGG GGG
Sbjct: 224 GGGHGGGFGGGAGGGLGGGAGGGTGGGFGGGAGGGAGGGAGGGFGGGAGGGAGGGFGGGA 283
Query: 214 GGGAGGGAGGGFGGGAGGGHGGGAGGGFGGGKGGGFGGGAGGGFGGRAGGGGGFGGGSGG 266
GGGAGGGAGGGFGGGAGGGHGGG GGGFGGG GGGFGGGAGGG GG AGGG G GGG+GG
Sbjct: 284 GGGAGGGAGGGFGGGAGGGHGGGVGGGFGGGSGGGFGGGAGGGAGGGAGGGFGGGGGAGG 343
BLAST of CcUC05G088910 vs. ExPASy TrEMBL
Match:
A0A0A0L5D7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G166350 PE=4 SV=1)
HSP 1 Score: 122.5 bits (306), Expect = 2.7e-24
Identity = 223/283 (78.80%), Postives = 226/283 (79.86%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAESRKLEKETLGGGVGLGGGAGGGLGLGFGGGHGG--- 60
MAK TFRNGALALV+ALLVVGLAESRKLEKETLGGG+G GGG GGG GLG GGG GG
Sbjct: 1 MAKLTFRNGALALVVALLVVGLAESRKLEKETLGGGLGGGGGLGGGGGLGGGGGLGGGGG 60
Query: 61 -------------GLGGGVGGGGGLGGGGGLGGGA--GGGGGLGGGGGLGGGAGGGFGGG 120
G GGG+GGGGGLGGGGGLGGG GGGGGLGGGGGLGGGAGGGFGGG
Sbjct: 61 LGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGAGGGFGGG 120
Query: 121 AGAGGGAGGGFGDGKGGGFGGGVGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFG 180
AG GGGAGGG G G GGGFGGG GGG GGG GGGFGGGKGGGFGGG GGG GGG GGGFG
Sbjct: 121 AGGGGGAGGGVGGGSGGGFGGGKGGGFGGGKGGGFGGGKGGGFGGGKGGGFGGGKGGGFG 180
Query: 181 GGKGGGFGGGAGSGAGGGAGGGFGGGAGGGAGGGAGGGFGGGAGGGAGGGFGGGAGGGHG 240
GGKGGGFGGG G G GGG GGGFGGG GGG GGG GGGF GGG GGGFGGG GGG G
Sbjct: 181 GGKGGGFGGGKGGGFGGGKGGGFGGGKGGGFGGGKGGGF----GGGKGGGFGGGKGGGFG 240
Query: 241 GGAGGGFGGGKGGGFGGGAGGGFGGRAGGGGGFGGGSGGGIGG 266
GG GGGFGGGKGGGFGGG GGGFGG GGGGG GGG GGG GG
Sbjct: 241 GGKGGGFGGGKGGGFGGGKGGGFGGGVGGGGGAGGGHGGGAGG 279
BLAST of CcUC05G088910 vs. ExPASy TrEMBL
Match:
A0A6J1GU15 (glycine-rich cell wall structural protein 1.8-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111457550 PE=4 SV=1)
HSP 1 Score: 114.8 bits (286), Expect = 5.7e-22
Identity = 229/293 (78.16%), Postives = 235/293 (80.20%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAESRKLEKETLGGGV--------GLGGGAGGGLGLGFG 60
MAK T++ GALALVLA L+VG AESRKLEKETLGGG+ G G GAGGGLG GFG
Sbjct: 1 MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGGGLGGGFG 60
Query: 61 GGHGGGL--GGGVGGGGGLGG------GGGLGGGAGGGGGLGGGGGLGGGAGGGFGGGA- 120
GGHGGGL GGG+GGGGGLGG GGG GGG GGGGGLGGGGGLGGGAGGG GGGA
Sbjct: 61 GGHGGGLGGGGGLGGGGGLGGGAGGGFGGGHGGGIGGGGGLGGGGGLGGGAGGGAGGGAG 120
Query: 121 -----GAGGGAGGGFGDGKGGGFGGGVGGGAGGGAGGGF----GGGKGGGFGGGAGGGAG 180
GAGGGAGGGFG GKGGGFGGG GGGAGGGAGGGF GGG GGGFGGG GGGAG
Sbjct: 121 GGFGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGAG 180
Query: 181 GGAGGGFGGGKGGGFGGGAGSGAGGGAGGGFGGGAGGGAGGGAGGGFGGGAGGGAGGGFG 240
GG GGG GGG GGGFGGGAG GAGGG GGG GGG GGG GGG GGGFGGGAGGGAGGGFG
Sbjct: 181 GGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGVGGGFGGGKGGGFGGGAGGGAGGGFG 240
Query: 241 GGAGGGHGGGAGGGFGGGKGGGFGGGAGGGFGGRAGG--GGGFGGGSGGGIGG 266
GGAGGG GGG GGG GGG GGGFGGG GGGFGG AGG GGGFGGG+GGG GG
Sbjct: 241 GGAGGGAGGGFGGGHGGGVGGGFGGGKGGGFGGGAGGGAGGGFGGGAGGGAGG 293
BLAST of CcUC05G088910 vs. ExPASy TrEMBL
Match:
A0A6J1GU61 (glycine-rich cell wall structural protein 1.8-like isoform X7 OS=Cucurbita moschata OX=3662 GN=LOC111457550 PE=4 SV=1)
HSP 1 Score: 114.0 bits (284), Expect = 9.6e-22
Identity = 222/275 (80.73%), Postives = 228/275 (82.91%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAESRKLEKETLGGGV--GLGGGAGGGLGLGFGGGHGGG 60
MAK T++ GALALVLA L+VG AESRKLEKETLGGG+ G GGG GGG G G GGG GGG
Sbjct: 1 MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGAGGGFGGG 60
Query: 61 LGGGVGGGGGLGGGGGLGGGAGGGGGLGGGGGLGGGAGGGFGG--GAGAGGGAGGGFGDG 120
GGG+GGGGGLGGGGGLGGGAGGG G G GGG GGGAGGG GG G GAGGGAGGGFG G
Sbjct: 61 HGGGIGGGGGLGGGGGLGGGAGGGFGGGKGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGG 120
Query: 121 KGGGFGGGVGGGAGGGAGGGF----GGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGG 180
KGGGFGGG GGGAGGGAGGGF GGG GGGFGGG GGGAGGG GGG GGG GGGFGGG
Sbjct: 121 KGGGFGGGAGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGAGGGFGGGAGGGAGGGFGGG 180
Query: 181 AGSGAGGGAGGGFGGGAGGGAGGGAGGGFGGGAGGGAGGGFGGGAGGGHGGGAGGGFGGG 240
AG GAGGG GGG GGG GGG GGG GGGFGGGAGGGAGGGFGGGAGGG GGG GGG GGG
Sbjct: 181 AGGGAGGGFGGGHGGGVGGGFGGGKGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGG 240
Query: 241 KGGGFGGGAGGGFGGRAGG--GGGFGGGSGGGIGG 266
GGGFGGG GGGFGG AGG GGGFGGG+GGG GG
Sbjct: 241 VGGGFGGGKGGGFGGGAGGGAGGGFGGGAGGGAGG 275
BLAST of CcUC05G088910 vs. ExPASy TrEMBL
Match:
A0A6J1GU56 (glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457550 PE=4 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 1.6e-21
Identity = 229/305 (75.08%), Postives = 235/305 (77.05%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAESRKLEKETLGGGV--------GLGGGAGGGLGLGFG 60
MAK T++ GALALVLA L+VG AESRKLEKETLGGG+ G G GAGGGLG GFG
Sbjct: 1 MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGGGLGGGFG 60
Query: 61 GGHGGGL--GGGVGGGGGLGG------GGGLGGGAGGGGGLGGGGGLGGGAGGGFGG--- 120
GGHGGGL GGG+GGGGGLGG GGG GGG GGGGGLGGGGGLGGGAGGGFGG
Sbjct: 61 GGHGGGLGGGGGLGGGGGLGGGAGGGFGGGHGGGIGGGGGLGGGGGLGGGAGGGFGGGKG 120
Query: 121 ---------------GAGAGGGAGGGFGDGKGGGFGGGVGGGAGGGAGGGFGGGKGGGFG 180
G GAGGGAGGGFG GKGGGFGGG GGGAGGGAGGGFGGG GGG G
Sbjct: 121 GGFGGGAGGGAGGGFGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGHGGGAG 180
Query: 181 GGAGGGAGGGAGGGFGGGKGGGFGGGAGSGAGGGAGGGFGGGAGGGAGGGAGGGFGGGAG 240
GG GGGAGGGAGGGFGGG GGG GGG G G GGG GGGFGGG GGG GGGAGGG GGG G
Sbjct: 181 GGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGVGGGFGGGKGGGFGGGAGGGAGGGFG 240
Query: 241 GGAGGGFGGGAGGGHGGGAGGGFGGGKGGGF----GGGAGGGFGGRAGG--GGGFGGGSG 266
GGAGGG GGG GGGHGGG GGGFGGGKGGGF GGGAGGGFGG AGG GGGFGGG G
Sbjct: 241 GGAGGGAGGGFGGGHGGGVGGGFGGGKGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHG 300
BLAST of CcUC05G088910 vs. ExPASy TrEMBL
Match:
A0A6J1GU19 (glycine-rich cell wall structural protein 1.8-like isoform X8 OS=Cucurbita moschata OX=3662 GN=LOC111457550 PE=4 SV=1)
HSP 1 Score: 112.5 bits (280), Expect = 2.8e-21
Identity = 223/281 (79.36%), Postives = 230/281 (81.85%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAESRKLEKETLGGGV--GLGGGAGGGLGL--GFGGGHG 60
MAK T++ GALALVLA L+VG AESRKLEKETLGGG+ G GGG GGG G G GGG G
Sbjct: 1 MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGGGLGGGFG 60
Query: 61 GGLGGGVGGGGGLGGGGGLGGGAGG------GGGLGGGGGLGGGAGGGFGGGAGAGGGAG 120
GG GGG+GGGGGLGGGGGLGGGAGG GGG+GGGGGLGGG G G G G G GGG G
Sbjct: 61 GGHGGGLGGGGGLGGGGGLGGGAGGGFGGGHGGGIGGGGGLGGGGGLGGGAGGGFGGGKG 120
Query: 121 GGFGDGKGGGFGGGVGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFG 180
GGFG G GGG GGG GGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGG GGG G
Sbjct: 121 GGFGGGAGGGAGGGFGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGAGGGAG 180
Query: 181 GGAGSGAGGGAGGGFGGGAGGGAGGGAGGGFGGGAGGGAGGGFGGGAGGGHGGGAGGGFG 240
GG G G GGGAGGGFGGGAGGG GGGAGGG GGG GGGAGGG GGG GGGHGGG GGGFG
Sbjct: 181 GGFGGGHGGGAGGGFGGGAGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGVGGGFG 240
Query: 241 GGKGGGF----GGGAGGGFGGRAGG--GGGFGGGSGGGIGG 266
GGKGGGF GGGAGGGFGG AGG GGGFGGG GGG+GG
Sbjct: 241 GGKGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGVGG 281
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038889055.1 | 1.9e-32 | 86.14 | glycine-rich cell wall structural protein-like isoform X1 [Benincasa hispida] | [more] |
XP_038889077.1 | 2.4e-27 | 78.28 | glycine-rich cell wall structural protein-like isoform X2 [Benincasa hispida] | [more] |
XP_023526914.1 | 8.6e-25 | 79.93 | glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo] | [more] |
KAG6582166.1 | 5.2e-22 | 80.22 | hypothetical protein SDJN03_22168, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022955577.1 | 1.2e-21 | 78.16 | glycine-rich cell wall structural protein 1.8-like isoform X3 [Cucurbita moschat... | [more] |
Match Name | E-value | Identity | Description | |
P27483 | 5.3e-09 | 79.51 | Glycine-rich cell wall structural protein OS=Arabidopsis thaliana OX=3702 GN=At3... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L5D7 | 2.7e-24 | 78.80 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G166350 PE=4 SV=1 | [more] |
A0A6J1GU15 | 5.7e-22 | 78.16 | glycine-rich cell wall structural protein 1.8-like isoform X3 OS=Cucurbita mosch... | [more] |
A0A6J1GU61 | 9.6e-22 | 80.73 | glycine-rich cell wall structural protein 1.8-like isoform X7 OS=Cucurbita mosch... | [more] |
A0A6J1GU56 | 1.6e-21 | 75.08 | glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita mosch... | [more] |
A0A6J1GU19 | 2.8e-21 | 79.36 | glycine-rich cell wall structural protein 1.8-like isoform X8 OS=Cucurbita mosch... | [more] |
Match Name | E-value | Identity | Description | |