CcUC05G088190 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC05G088190
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description40S ribosomal protein S21
LocationCicolChr05: 5901667 .. 5909347 (-)
RNA-Seq ExpressionCcUC05G088190
SyntenyCcUC05G088190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAGCTCAAACATCCATGGCTTCCTCATGATCTGCGCAATCTCCGCCTCCTATCTGGCCCTCTCTTCATCCACCGCCGTCGATTTCACCGGAGACCGCCAGTTCCTCCACCTTCCGCAGGAATCTGTTTGTCGTTCAGGATCGGGATCGATCGCCGAGTGCCAGTTGGCGGCGGAGTTCAAGATACCGTCGGAGATCAGCCGCCGGATTCTGGCGACTACGAGGCGTTATATTAGCTACAGTGCGATGCGGAGGAACTCGGTGCCGTGCTCCCGACGCGGCGCGTCGTATTACAATTGCCAGGCTGGAGCTCCGGCGAATCCGTACTCTCGTGGGTGCAGCGCCATTACTCGATGTAGGTGATGATTTTGGTGGTTTTCTTTTTTCTTTGAAAAGTTTTGAATTCTTACTTATTTCTCTTTGTCTATTATACAAATATCAAATTGTTTTAAGTATTTATTTACAGTGTTATTATACTCGGGGGCAATATTGTAATTATACTTGTTAAATGATGTATTTGCTTGTAATTTCTTTTCCATCTCTACGTCAACATAATCCGTCAATGGTAAAGTAAAAAGGTGGCTCTAGTTAATTATTTTTGTTGCTATTTAACTATTGTGCAATCGTAATTAATTGTGGGACCTACTATCGTTACAATTATTATTACGGTAAAAATATGAAAATTATGAGTTTATCACATTTATTATCTTCGCCATTATCATTAGAGTCAAGTAGTAGAGACAATAGTAACAATAATAGTAAAATTTGACAGATTCATAATTTTAATTAAACGCGATCAAAGACAGTCAAATTATGTTTGCGATTTAGACCTATTACCATCCATCCTTCATATAAATCTCAATATAATTACACCAATTTTTATTATGAATTGGTAAATTGACCTTAAATCAATCTAACTCTTTTTCTATTGTTATACACGTTGGAAGACATGTATGTAACTTAAAATGTTAATGACTTAATTTTTATGATAAATTTTAACTTTTGATTAAGTTTAGTTATTATGTTTTTTAATTAAGTTAAGTAATTAAAGAAAATAGTATTTAAACCTATGTGTTTATTGTGTTAAGTTGTTTTTCAATATAAATGAAATGGGTGGGTTGTGGTAGAAAACTTTAAATTTTAACTAAGAAATAAAAATTTTGAATAAAAATATTTATAATTAAGTTTAAATTTTAAATATTTGACGTGAAATTTAAAAGTATATATATATATATGAATAAAATTAATGTACATATAATGTAATTGGAATAAAATTTGAAATTTAAAGATAACAATGCTACATTTTTATTGGTGACAATAAAGTTATGGAATCTCGTAACTCTATTTTGTCATGATTCAATTTTTTTTGGTTATAAATAACAAAAACTTTTAATTTAATTTTTTTATATATTAAAAAAAAAAAAAGCTTTAATATCTTTTGTAGGAGAAACCATTTTAAAATGAAATGTGGGCCACCAAAGAAAAACAAAATTATTTATATTTTATTTATTCTATGGAATGGTAGGTATAATTTATATGAAAATTATTTTAAATGACAAAATTGTGAAAAATATTTACAACTAATAGCAAAATATCACAGTCTATTGTGATCAATTGCAGATAGAAAGTAAAACTTTGTTATATTTATAAATATTTTAGTTATTTTTACTATATTTAAAAAGAGTCCAAATTTTTATGAGATGATATGCATTAGTTTAAAATTGAATTACTAATACTGAAAAATACAAAATTTGTTTTGGTTATTATGTTTACTATAATTGTTTAAATATGAAAAAAAGAAAACCAAAAGTTAAAATTAAATTACTTATTCTTAGAAGAAATACAAAATTTTGTTTCCGTTATTATGCTCAATCGGACAATTATAAACTTGAAAAATAAAAGTTAAAAATATTGATACACATGAAATTGTCTTTAATTATAAAATGAGTGTGAATGCAATTTGTAATTACTTTTTCCATCCCCCATCTCTCTGCTCTTCTATGTTTTTTCTCTCACCTCTCCCCCTACTTATGTCATACTTCCTTGTGAGTTATGGTGAAAAATTTCCATTGAAATTTCGAAATTTTGGTAGCAAGGGTATTCTATTTTTGCACCATTTCGATGCAATTTTGGTTTTTCTTAGAGGAATTAGCTACGTTGGTTCATGTTTTTTTCTTTTTTTTTCTTTTTCTTCTCCAGTTTTATGATTCTCACTGAATGCAATTATATAGTTTCACGTGTCAATGTCATTTTTTTTATTAAATTTTTACATTATTTTACCTCAAAATTGAATCAATGTGAATTTTGTTTCTTTTACCATCAAAAACTTTATTTTCAATAAACCAAATCTGAGAAAAATAAAGTATACTTAGTTTTGACTTTTTTTTTTTTTTTAAAAAAAATCTTTCAAGTATTGACTATGATATTCCACTAAACAGTCATCCATGAGGAAGATCATTGGCCAATGAGATGTATCCACCAATTGGGTTTATATGGTGGTCGTACGAGATATATGGTGTCCATTGTGTCATGTTAGACAAAAATAGTAGTTTATCATGATTTATCTCATGTATAATGTGATGTTTTGTTATTATTTGTAATTATTTTCAAAAGTTTTGTAATTTAAAATAATTTTCCTTAAAAAACACTAAACCTTTTTTTTTCTTTTTAATTTGACGGTTTAAATTATCACTAGCTTCAAATACACTTTTAATCCATATGCTTTGAAGTTTGTTAAATTTTCGTTTCTATATTTTTAATTATCAAATTTCAGTTTTTGTACTTTCAATAAATTTTAAATTTAGTCTCTCTTGCTTGTTTATTGTTAAGTTATTTAAAAAAATTTTTGTTATCCATTAGCATTTTCACTATAAAATTTGAAAACATATTCACATATATATTATATTTTCTTCCATAAATATTAATTTTATTTTTTAGTCAATCATGATAAAAGCTAACTTTGAGAGATTTTATTTAAGATGCATAAGCAGTATAAATGCTAAAGTTGCAAATTTGAAAATACAAGATTAAAATTGAACCAAGTTCATAATATTTGGGGATCAAAATGACATTTAAACATATTATTATTAATAAGTAAAAATACAATTTTCATCTCTATAATCGAATGTTTGTTTAATTTCAACTTCTATACTTTCAAATGTCCAGCTTTAGTCTTTGTATTTAAAAAAAAATGGTTAAAAAACACATTTAGTCCATAAATTTTAATGGAAGTAACAATTTAGTCATTGAATTTTGGTTTGTAACGATTTAGTCTATGTATTTTTAATATTGTAACAATTTGGTCCCTAAATTTTACTATGTAACAATTTAATCATAGTACTTTCAAATTTGTAACAATTTAGTCCTTGACGTAATTTTTTTTAATCAAAATTAGATATCAATTATTATTATTATTTGATGTATACTTTGTATTTATAAAAATATTGAGCATCTAATTAGTTTATCGAAATATTTAATTTCCACAATGGGTAATAATTTGATGCAAATTTTAAAGTACAATGACTAAATTGTTACACAATAAAGTCCAATAACTAAATTGTTACAAAATTGAAAGCTTGGGAACTAAATTGTTACTTTCACAAGAGTTTAGGAATTAAAAGTGATTTTTAACCTAAATTGTTATTTAGTCCGTCTTCTTTGTTTATTTTTCATTTTTTTCAAGACATTTTTTAAAAAATTTATTAACATTATCGCAATAAATTTTAAAACCATAATAAAATATTATATTTTTTATATAAAAATTATTATAATTATTTAGCCAATTTCAATTTTTTTTGAAGAGACTAAATTTAAATTTATTGAAATTTTATGAATTAAAATTAAATATTAAAAAGTTTAAAAATTAAAATTGAATAAAGTAAAAGAACTAAAATAATATTTTACTTTATTATTAGAAACCGGAGGGAAAAATACAAGGGTGTTATATATATAAATAAAAACGAAAACTAAAATTAAAAGAGCGGTGAAAAGATAAGAGAAGATAAAAGAAAGATTTGACTTGATTCAAAAATATATAATATATATTGCTTAAAGTTCAACCTGTCTTCTTCACACCTCAAACAACGAAAACAAAAACTCTTCGATCATCTCCCTCCTTTGTTTGAACTAATTTCAATCGATACAAAGAAATGTCTTATGAAGTAACTAAAATAACTCCATCCTTCCTTAATCATCTTTCTATTAATGAAGCTATACATAGTTTGAAGTTTCTTGGAGATGTTGGTGATATCGATTTAAATTTTTTAGATTGTATTTTGCCACATTGCATTATTGACCAATTGATGCATATGGAGAACTTTCCAAAGGAAGGGATCTCACATATACGATTGACAAGTTGTAGAAAAACTTATATAAGAAAAAGTTTGATAAGAACGATTATGATTTTGTGATTGAGAGGATGAAACATAAGAAAGAGTCATTTAAATGGAAGCAAATATACGAAACAAAGATGGAAGAATTATAAAAGAAGGCGAGAGAACTTGAGGCTCGATATATACAAAACCGTCAAAAGGAAAAAGTTAAAAAACCAAAGTCGTCAAATAATATTTTGTGGGAATGTTTCTTCTTCGAGTAATATTTGAAGGAACAACAACTTAGTTTGGATGCAATACCACCGAGAGCAAGATTTTGAAGAAGCCAAAAAGAGAACAAATTTGTGAAGTTCCATATGTGAACAATAACAAGAAGAAACGAAACTTTGGAGGAAAAATCAAACCTAGATACAATATTAAACAAAGCAAGATATTGAAGAAGGCAAAGAGAAAAATGCTGTAGTGTATAGAGACGAATAACCTAATAGTTTTTCAAAGAAATGCGATACAAAAGTAGTGTTAGTTTTGTATCAACAATAAACTATCTGTCATTATGGTAAGTTTGAGAGTTTAATTTTAACATTTTTAGTAGTCTAAGAGTCTAATTCTTATAATTGAAAATTTGATTCAAGTGTGATTTTAGTAGTTTGCCAAAAAGAAGTTGAAAATGTATTGCACGGTCAAAATTAAAAGACTTCAAAAAAAGTTTTTAAGATTAAAAAGTAGAAGATTTAGGTAAGTTTATTGTCAAAATTAATGAAATTGGGAGTATAGGGTCCAAATTGGTAACCTTCAACAATTCGATATTTTTTTTTTTTCCTTCTAAATTTTAATTAAAGTTAAAATATGCAAATATTCCAACATTATATGCAGGCTTAGGGTTTCTCTTCTAAATTTTAGGGTTTCTTCCGCACGCCTCTCTCTCTCTTTCGGATAGTTCGTTTCCTCTGGTGCGCTTGCGGTTTGTTCTCTCTCTGTTGTAGTCTTAAGAATCGTTTGCGCTTGTACTTATTCAATTTGAATCGAATTTGGTTTCACTAATCTGACTCCTAAATTTTGGGTCTTCGCATTTTTGGTAATTGCAACTGTATTTGTTCTTATGAAATATTGATCGGATCTTTTTAAAGCAGGTTTTCTAGTTCTAAAGTATTAGTTGATACAGTTCAAGATGCAGAACGAAGAGGGTAAAATCACAGAGCTTTATATTCCCAGAAAATGGTTCGTAATAGTGTTATTATTTATCTAACTTCGATGATTCTGTCCCTAATTTTCACATGGTTTGAAGTTTATTCATGGGTTATTGTGACGTTGATGCAGCTCCGCAACGAACCGGCTGATTACTTCCAAGGACCATGCTTCTGTCCAGATCAACATTGGGCATTTGGATGAGAATGGCATCTACACCGGCCAATTTTCCACTTTTGCTCTCTGTGGTTTCGTTCGGGCCCAGGTGTTTTTCCTTTCCCTTTATGTGTCTCTCGTTGTTGTTGGGTTTGTAGCGATAGGATGCAGTTGTTAATCTGTAACATATTGGAGCATTGACTTGGAACAGGGCATTTTATTTTACTCTGTCTTGGTGCAAACAAAAATATAGTTCAGTTCATGCTGAGTCGGGATTGTATTGCGCTTTGTTGTGTTGAAAGTCTTGTTTAAGACTGGTGAATTGAACTTGCTTATGATTGCACCCATCGGTATTTGATTTTAGTTCTTCTAGTAAAGGGTGCGCAATTGAGAACGACTTATTCTTCTTGGTCATTTGATGCTCTGCTGGCTGCTGGCTGTGTTTTTATATAACAAACATGTTTATTCGATCGTCTGTAATTCTTGTTGCCTGTTATATTATGAAGCACCATTTTATGCACTGCTGTAACCTGTAGCTAACTGAAATTAATCATCACTCAAAAATGAAGAATAGATAGGTTTAGAGTTGGACTAAATCATGGCATTAGAAAAGAAATCTTGAACATATCTAGACTACACTCTATAAACAATAGACAGTAATAAAAAAGCACTAAATGAAAGTGAAAGACAATGAGGACAAACGGTAGAAGCCTGCATAATTGAGTCTCCAATGGCCTCCTTCGCCCTCTTGCTTCATCTTGAATGGTGGGAAAAGCCATTTTAGAGTTATAGTAAATCATAGCCCTATAGAAGAAATATTGAATATGGAAAACTACGGCGTACGGACAATAATAAAAAAGTACCAAAAGAAAGAGAAAGAAAATGAGAAGAATGGGTATAAGCCTGGAAATTTGAGTCTCAAAAGACCTTTGACATATGCCTTTGTCCTCCGGACCTCCAGCTTCATCTTGAATGGTGAGAGACGTCACTGTGGTGTTAAGGATGTTGGGAATATACACATCTTTCATGTCCATTATCTTGTTATTTCTTTCCTCATGCTCTGGAATCTGGGTCGATAGGCACAAGATTTTTGTCCTTTCGATGTGGTGTTGATGCTGCTGATTATAGCCTATAGCTGTCTCGAATTTTGCTATATAGTTCAATCCCCATGCTTTGGAATCTGACCTGATGGGTGTTTGAGGCTTCTGTCAATGAATTTTATGCTCCCTATCGTCACTTGTACCATGTCTTCTGCTGTTACTTGTACATTTTCACCTACTTGACTGCGGTCTCTACATATATTGTAGTCTGGCCCCCATATCAGTTTGTCTTAGTCTTCAATTTACATGTTCTTTATTTGGTTCTTTTTGTAATTATTAAGTAAAAAATAATGACTTCTCTACCTATGGTGATATTGATACACTTGTGTTACTTTCTTTTATTTTGTGTAGGGAGATGCTGACAGTGGACTGGATCGGCTCTGGCAGAAGAAGAAAGTCGAAGTGCATCAACAATAGATGATTGTGCTGTTCTGGTTCATCTCTATATCAAAGTTTAAAAGGATAGAGACACACTTAAAATTTTTTTTGAACCACTCGTAGTTAAGTAGTTTCTTTTGACAACTTAAACTCATTAGTTTCTTTAAATGCAAACTTAACTACGTCTGAGACAGTACAAGCATTGATGTGGGTCAAAAGAGGGCCAAAACTAAGTTGAATGAAATATGTTGAATTTCATTTTCCATTAAAAATATTTACTAGAGAGATTCAATATGGCCACATGTGAATGTGAATGTGATGTTGATATGATAAGGATGCTTTTCGGGTTTTGATAGGTTGTCTGCTCTTGGCAAGGGATGAAAATATTAAAATATTAATGGTTATGAATTTAGAGATTTTTGTACAGATGACCGTTTCATGGCTATATTATGATTGATGACCCACTCGTGCTTGAGTGGAGAAAAATAAGGTTCTTGATGGATGATTATTGCGTTAGAGCTATGATAG

mRNA sequence

ATGCAAAGCTCAAACATCCATGGCTTCCTCATGATCTGCGCAATCTCCGCCTCCTATCTGGCCCTCTCTTCATCCACCGCCGTCGATTTCACCGGAGACCGCCAGTTCCTCCACCTTCCGCAGGAATCTGTTTGTCGTTCAGGATCGGGATCGATCGCCGAGTGCCAGTTGGCGGCGGAGTTCAAGATACCGTCGGAGATCAGCCGCCGGATTCTGGCGACTACGAGGCGTTATATTAGCTACAGTGCGATGCGGAGGAACTCGGTGCCGTGCTCCCGACGCGGCGCGTCGTATTACAATTGCCAGGCTGGAGCTCCGGCGAATCCGTACTCTCGTGGGTGCAGCGCCATTACTCGATGTAGGTTTTCTAGTTCTAAAGTATTAGTTGATACAGTTCAAGATGCAGAACGAAGAGGCTCCGCAACGAACCGGCTGATTACTTCCAAGGACCATGCTTCTGTCCAGATCAACATTGGGCATTTGGATGAGAATGGCATCTACACCGGCCAATTTTCCACTTTTGCTCTCTGTGGTTTCGTTCGGGCCCAGGGAGATGCTGACAGTGGACTGGATCGGCTCTGGCAGAAGAAGAAAGTCGAAGTGCATCAACAATAGATGATTGTGCTGTTCTGGTTCATCTCTATATCAAAGTTTAAAAGGATAGAGACACACTTAAAATTTTTTTTGAACCACTCGTAGTTAAGTAGTTTCTTTTGACAACTTAAACTCATTAGTTTCTTTAAATGCAAACTTAACTACGTCTGAGACAGTACAAGCATTGATGTGGGTCAAAAGAGGGCCAAAACTAAGTTGAATGAAATATGTTGAATTTCATTTTCCATTAAAAATATTTACTAGAGAGATTCAATATGGCCACATGTGAATGTGAATGTGATGTTGATATGATAAGGATGCTTTTCGGGTTTTGATAGGTTGTCTGCTCTTGGCAAGGGATGAAAATATTAAAATATTAATGGTTATGAATTTAGAGATTTTTGTACAGATGACCGTTTCATGGCTATATTATGATTGATGACCCACTCGTGCTTGAGTGGAGAAAAATAAGGTTCTTGATGGATGATTATTGCGTTAGAGCTATGATAG

Coding sequence (CDS)

ATGCAAAGCTCAAACATCCATGGCTTCCTCATGATCTGCGCAATCTCCGCCTCCTATCTGGCCCTCTCTTCATCCACCGCCGTCGATTTCACCGGAGACCGCCAGTTCCTCCACCTTCCGCAGGAATCTGTTTGTCGTTCAGGATCGGGATCGATCGCCGAGTGCCAGTTGGCGGCGGAGTTCAAGATACCGTCGGAGATCAGCCGCCGGATTCTGGCGACTACGAGGCGTTATATTAGCTACAGTGCGATGCGGAGGAACTCGGTGCCGTGCTCCCGACGCGGCGCGTCGTATTACAATTGCCAGGCTGGAGCTCCGGCGAATCCGTACTCTCGTGGGTGCAGCGCCATTACTCGATGTAGGTTTTCTAGTTCTAAAGTATTAGTTGATACAGTTCAAGATGCAGAACGAAGAGGCTCCGCAACGAACCGGCTGATTACTTCCAAGGACCATGCTTCTGTCCAGATCAACATTGGGCATTTGGATGAGAATGGCATCTACACCGGCCAATTTTCCACTTTTGCTCTCTGTGGTTTCGTTCGGGCCCAGGGAGATGCTGACAGTGGACTGGATCGGCTCTGGCAGAAGAAGAAAGTCGAAGTGCATCAACAATAG

Protein sequence

MQSSNIHGFLMICAISASYLALSSSTAVDFTGDRQFLHLPQESVCRSGSGSIAECQLAAEFKIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGCSAITRCRFSSSKVLVDTVQDAERRGSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFVRAQGDADSGLDRLWQKKKVEVHQQ
Homology
[Close]
BLAST of CcUC05G088190 vs. NCBI nr
Match: XP_022138185.1 (protein RALF-like 33 [Momordica charantia])

HSP 1 Score: 170.6 bits (431), Expect = 1.4e-38
Identity = 88/121 (72.73%), Postives = 97/121 (80.17%), Query Frame = 0 

Query: 1   MQSSNIHGFLMICAISASYLALSSSTAVDFTGDRQFLHLPQESVCRSGSGSIAECQLAAE 60
           M +S IHGFL++CAISASYL LSSSTAVDFTGDRQFL LP ES CR   G IAEC L  +
Sbjct: 1   MGNSRIHGFLLLCAISASYLPLSSSTAVDFTGDRQFLLLPPESACR---GPIAECVLGGD 60

Query: 61  FKIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGCSAITRC 120
               + +  RILAT  RYISY A+RRN+VPCSRRGASYYNC+ GAPANPYSRGCSAITRC
Sbjct: 61  AFQFATVGHRILATATRYISYGALRRNTVPCSRRGASYYNCRPGAPANPYSRGCSAITRC 118

Query: 121 R 122
           R
Sbjct: 121 R 118

[Close]
BLAST of CcUC05G088190 vs. NCBI nr
Match: XP_022138421.1 (protein RALF-like 33 [Momordica charantia])

HSP 1 Score: 142.9 bits (359), Expect = 3.1e-30
Identity = 79/128 (61.72%), Postives = 95/128 (74.22%), Query Frame = 0 

Query: 1   MQSSNIHGFLMICAISASYLALSSSTAVDFTGDRQFLHLPQESVCRSGSGSIAECQLA-- 60
           M+ S +   L   AI A++L LSS+TA DF+GD + L++P +S CR   GSIAEC LA  
Sbjct: 1   MEISRVSSLLAAFAIFAAHLLLSSATAADFSGDHKLLYVPAKSECR---GSIAECLLAGD 60

Query: 61  -----AEFKIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRG 120
                 EF++ SEI+RRILA T RYISY A++RNSVPCSRRGASYYNCQ GA ANPY+RG
Sbjct: 61  DSGFGTEFEMDSEINRRILA-TMRYISYGALKRNSVPCSRRGASYYNCQPGAQANPYNRG 120

Query: 121 CSAITRCR 122
           CSAITRCR
Sbjct: 121 CSAITRCR 124

[Close]
BLAST of CcUC05G088190 vs. NCBI nr
Match: XP_028751592.1 (protein RALF-like 33 [Prosopis alba])

HSP 1 Score: 137.9 bits (346), Expect = 9.8e-29
Identity = 75/125 (60.00%), Postives = 91/125 (72.80%), Query Frame = 0 

Query: 3   SSNIHGFLMICAISASYLALSSSTAVDFTGDRQFLHLPQESVCRSGSGSIAECQLA---- 62
           SS  +GF ++CAI A +++LSSST VDF GD +    P +S CR   GSI EC L+    
Sbjct: 45  SSGFYGFFVLCAILAVHVSLSSSTTVDFIGDNEIGFFPMKSECR---GSIGECLLSEDGL 104

Query: 63  --AEFKIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGCSA 122
             +EF++ SE +RRILA  RRYISY A+RRN+VPCSRRGASYYNC+ GA ANPY RGCS 
Sbjct: 105 FGSEFEMDSETNRRILA-GRRYISYGALRRNTVPCSRRGASYYNCRPGAQANPYRRGCSR 164

[Close]
BLAST of CcUC05G088190 vs. NCBI nr
Match: XP_038875155.1 (protein RALF-like 33 [Benincasa hispida])

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-28
Identity = 77/130 (59.23%), Postives = 93/130 (71.54%), Query Frame = 0 

Query: 1   MQSSNIHGFLMICAISASYLALSSSTAVDFTGDRQFLHLPQESVCRSGSGSIAECQLAA- 60
           M  S +   L   AI A++  +SS+TAVDF+GD + L +P +S CR   GSIAEC LA  
Sbjct: 1   MGISRVSSLLAAVAILAAHFLISSATAVDFSGDHKLLFVPTKSECR---GSIAECFLAGN 60

Query: 61  --------EFKIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYS 120
                   EF + SEI+RRILATT RYISY A+RRN+VPCSRRGASYYNC+ GA ANPY+
Sbjct: 61  DDDSAFGMEFVMDSEINRRILATT-RYISYGALRRNNVPCSRRGASYYNCRPGAQANPYT 120

Query: 121 RGCSAITRCR 122
           RGC+AITRCR
Sbjct: 121 RGCNAITRCR 126

[Close]
BLAST of CcUC05G088190 vs. NCBI nr
Match: XP_023000591.1 (protein RALF-like 33 [Cucurbita maxima])

HSP 1 Score: 136.3 bits (342), Expect = 2.9e-28
Identity = 76/130 (58.46%), Postives = 92/130 (70.77%), Query Frame = 0 

Query: 1   MQSSNIHGFLMICAISASYLALSSSTAVDFTGDRQFLHLPQESVCRSGSGSIAECQLAA- 60
           M+ S +  FL   AI A++  LSS+  VDF+GD + L +P ES CR   GSIAEC LA  
Sbjct: 1   MEISRVFSFLAASAIIAAHFLLSSAMVVDFSGDDKLLFVPAESKCR---GSIAECFLAGD 60

Query: 61  --------EFKIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYS 120
                   EF++ SEI+RRILA + RY+SY A++RNSVPCSRRGASYYNCQ GA ANPY 
Sbjct: 61  DNDSAFGMEFEMDSEINRRILAAS-RYLSYGALKRNSVPCSRRGASYYNCQPGAQANPYR 120

Query: 121 RGCSAITRCR 122
           RGC+AITRCR
Sbjct: 121 RGCNAITRCR 126

[Close]
BLAST of CcUC05G088190 vs. ExPASy Swiss-Prot
Match: Q9M337 (40S ribosomal protein S21-1 OS=Arabidopsis thaliana OX=3702 GN=RPS21B PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.7e-28
Identity = 58/68 (85.29%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 137 RRGSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFVRAQGDADSGLDRLWQK 196
           R+ SATNR+ITSKDHASVQ+NIGHLD NG+YTGQF+TFALCGFVRAQGDADSG+DRLWQK
Sbjct: 15  RKCSATNRMITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQK 74

Query: 197 KKVEVHQQ 205
           KKVE  QQ
Sbjct: 75  KKVEAKQQ 82

[Close]
BLAST of CcUC05G088190 vs. ExPASy Swiss-Prot
Match: Q3E902 (40S ribosomal protein S21-2 OS=Arabidopsis thaliana OX=3702 GN=RPS21C PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.5e-27
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 0 

Query: 137 RRGSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFVRAQGDADSGLDRLWQK 196
           R+ SATNRLITSKDHASVQ+NIGHLD NG+YTGQF+TFALCGFVRAQGDADSG+DRLWQK
Sbjct: 15  RKCSATNRLITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQK 74

Query: 197 KKVEVHQ 204
           KKVE  Q
Sbjct: 75  KKVEAKQ 81

[Close]
BLAST of CcUC05G088190 vs. ExPASy Swiss-Prot
Match: P35687 (40S ribosomal protein S21 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS21 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.9e-25
Identity = 53/68 (77.94%), Postives = 62/68 (91.18%), Query Frame = 0 

Query: 137 RRGSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFVRAQGDADSGLDRLWQK 196
           R+ SATNR+IT+KDHASVQINIGH+DENG+Y G+F+TFAL GF+RAQGDADS LDRLWQK
Sbjct: 15  RKCSATNRIITAKDHASVQINIGHVDENGLYDGRFTTFALSGFIRAQGDADSALDRLWQK 74

Query: 197 KKVEVHQQ 205
           +K EV QQ
Sbjct: 75  RKAEVKQQ 82

[Close]
BLAST of CcUC05G088190 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.6e-24
Identity = 65/115 (56.52%), Postives = 83/115 (72.17%), Query Frame = 0 

Query: 10  LMICAISASYLALSSSTAVDFTGDRQFLHLPQESVCRSGSGSIAECQLAA---EFKIPSE 69
           + I  +   + A++S ++ DF        +P ES C   +G+IAEC L+    EF++ SE
Sbjct: 13  IAILTVHFLFAAVTSQSSGDF--------VPIESKC---NGTIAECSLSTAEEEFEMDSE 72

Query: 70  ISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGCSAITRCR 122
           I+RRILATT +YISY A+RRN+VPCSRRGASYYNC+ GA ANPYSRGCSAITRCR
Sbjct: 73  INRRILATT-KYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]
BLAST of CcUC05G088190 vs. ExPASy Swiss-Prot
Match: Q41852 (40S ribosomal protein S21 OS=Zea mays OX=4577 GN=RPS21 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.6e-24
Identity = 53/67 (79.10%), Postives = 59/67 (88.06%), Query Frame = 0 

Query: 137 RRGSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFVRAQGDADSGLDRLWQK 196
           R+ SATNR+IT+KDHASVQINIGHLD NG+Y G F+TFAL GFVRAQGDADS LDRLWQK
Sbjct: 15  RKCSATNRIITAKDHASVQINIGHLDANGLYDGHFTTFALSGFVRAQGDADSSLDRLWQK 74

Query: 197 KKVEVHQ 204
           KK E+ Q
Sbjct: 75  KKAEIKQ 81

[Close]
BLAST of CcUC05G088190 vs. ExPASy TrEMBL
Match: A0A6J1C8R0 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111009419 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 6.6e-39
Identity = 88/121 (72.73%), Postives = 97/121 (80.17%), Query Frame = 0 

Query: 1   MQSSNIHGFLMICAISASYLALSSSTAVDFTGDRQFLHLPQESVCRSGSGSIAECQLAAE 60
           M +S IHGFL++CAISASYL LSSSTAVDFTGDRQFL LP ES CR   G IAEC L  +
Sbjct: 1   MGNSRIHGFLLLCAISASYLPLSSSTAVDFTGDRQFLLLPPESACR---GPIAECVLGGD 60

Query: 61  FKIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGCSAITRC 120
               + +  RILAT  RYISY A+RRN+VPCSRRGASYYNC+ GAPANPYSRGCSAITRC
Sbjct: 61  AFQFATVGHRILATATRYISYGALRRNTVPCSRRGASYYNCRPGAPANPYSRGCSAITRC 118

Query: 121 R 122
           R
Sbjct: 121 R 118

[Close]
BLAST of CcUC05G088190 vs. ExPASy TrEMBL
Match: A0A6J1C9N4 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111009595 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.5e-30
Identity = 79/128 (61.72%), Postives = 95/128 (74.22%), Query Frame = 0 

Query: 1   MQSSNIHGFLMICAISASYLALSSSTAVDFTGDRQFLHLPQESVCRSGSGSIAECQLA-- 60
           M+ S +   L   AI A++L LSS+TA DF+GD + L++P +S CR   GSIAEC LA  
Sbjct: 1   MEISRVSSLLAAFAIFAAHLLLSSATAADFSGDHKLLYVPAKSECR---GSIAECLLAGD 60

Query: 61  -----AEFKIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRG 120
                 EF++ SEI+RRILA T RYISY A++RNSVPCSRRGASYYNCQ GA ANPY+RG
Sbjct: 61  DSGFGTEFEMDSEINRRILA-TMRYISYGALKRNSVPCSRRGASYYNCQPGAQANPYNRG 120

Query: 121 CSAITRCR 122
           CSAITRCR
Sbjct: 121 CSAITRCR 124

[Close]
BLAST of CcUC05G088190 vs. ExPASy TrEMBL
Match: A0A6J1KG89 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111494831 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.4e-28
Identity = 76/130 (58.46%), Postives = 92/130 (70.77%), Query Frame = 0 

Query: 1   MQSSNIHGFLMICAISASYLALSSSTAVDFTGDRQFLHLPQESVCRSGSGSIAECQLAA- 60
           M+ S +  FL   AI A++  LSS+  VDF+GD + L +P ES CR   GSIAEC LA  
Sbjct: 1   MEISRVFSFLAASAIIAAHFLLSSAMVVDFSGDDKLLFVPAESKCR---GSIAECFLAGD 60

Query: 61  --------EFKIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYS 120
                   EF++ SEI+RRILA + RY+SY A++RNSVPCSRRGASYYNCQ GA ANPY 
Sbjct: 61  DNDSAFGMEFEMDSEINRRILAAS-RYLSYGALKRNSVPCSRRGASYYNCQPGAQANPYR 120

Query: 121 RGCSAITRCR 122
           RGC+AITRCR
Sbjct: 121 RGCNAITRCR 126

[Close]
BLAST of CcUC05G088190 vs. ExPASy TrEMBL
Match: A0A6J1KVY0 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111499183 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 2.4e-28
Identity = 74/130 (56.92%), Postives = 92/130 (70.77%), Query Frame = 0 

Query: 1   MQSSNIHGFLMICAISASYLALSSSTAVDFTGDRQFLHLPQESVCRSGSGSIAECQLAA- 60
           M  S +   +   A+ A++  +SS+TA+DF+GD + L  P +S CR   GSI EC LA  
Sbjct: 1   MGISRVSALIAAFAVLAAHFLISSATAIDFSGDNEILFAPTKSECR---GSITECFLAGN 60

Query: 61  --------EFKIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYS 120
                   EF++ SEI+RRILATT RYISY A+RRN+VPCSRRGASYYNC+ GA ANPY+
Sbjct: 61  YDDSGFGMEFEMDSEINRRILATT-RYISYGALRRNNVPCSRRGASYYNCRPGAQANPYT 120

Query: 121 RGCSAITRCR 122
           RGCSAITRCR
Sbjct: 121 RGCSAITRCR 126

[Close]
BLAST of CcUC05G088190 vs. ExPASy TrEMBL
Match: A0A2P5ERZ0 (Rapid ALkalinization Factor OS=Trema orientale OX=63057 GN=TorRG33x02_159070 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 2.4e-28
Identity = 76/114 (66.67%), Postives = 88/114 (77.19%), Query Frame = 0 

Query: 12  ICAISASYLALSSSTAVDFTGDRQFLHLPQESVCRSGSGSIAECQLAA----EFKIPSEI 71
           ICAI A +LAL+SS+A+DF GD Q   L   SVCR   GSIAEC +A     E ++ SE 
Sbjct: 16  ICAILAVHLALASSSALDFGGDHQLSWLSSGSVCR---GSIAECLIAGDDDLEMQMNSES 75

Query: 72  SRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGCSAITRCR 122
           +RRILAT+ RYISY A+RRN+VPCSRRGASYYNC+ GA ANPYSRGCSAITRCR
Sbjct: 76  NRRILATS-RYISYGALRRNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCR 125

[Close]
BLAST of CcUC05G088190 vs. TAIR 10
Match: AT3G53890.1 (Ribosomal protein S21e )

HSP 1 Score: 125.2 bits (313), Expect = 6.1e-29
Identity = 58/68 (85.29%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 137 RRGSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFVRAQGDADSGLDRLWQK 196
           R+ SATNR+ITSKDHASVQ+NIGHLD NG+YTGQF+TFALCGFVRAQGDADSG+DRLWQK
Sbjct: 15  RKCSATNRMITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQK 74

Query: 197 KKVEVHQQ 205
           KKVE  QQ
Sbjct: 75  KKVEAKQQ 82

[Close]
BLAST of CcUC05G088190 vs. TAIR 10
Match: AT3G53890.2 (Ribosomal protein S21e )

HSP 1 Score: 125.2 bits (313), Expect = 6.1e-29
Identity = 58/68 (85.29%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 137 RRGSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFVRAQGDADSGLDRLWQK 196
           R+ SATNR+ITSKDHASVQ+NIGHLD NG+YTGQF+TFALCGFVRAQGDADSG+DRLWQK
Sbjct: 15  RKCSATNRMITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQK 74

Query: 197 KKVEVHQQ 205
           KKVE  QQ
Sbjct: 75  KKVEAKQQ 82

[Close]
BLAST of CcUC05G088190 vs. TAIR 10
Match: AT5G27700.1 (Ribosomal protein S21e )

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-28
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 0 

Query: 137 RRGSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFVRAQGDADSGLDRLWQK 196
           R+ SATNRLITSKDHASVQ+NIGHLD NG+YTGQF+TFALCGFVRAQGDADSG+DRLWQK
Sbjct: 15  RKCSATNRLITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQK 74

Query: 197 KKVEVHQ 204
           KKVE  Q
Sbjct: 75  KKVEAKQ 81

[Close]
BLAST of CcUC05G088190 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 113.6 bits (283), Expect = 1.9e-25
Identity = 65/115 (56.52%), Postives = 83/115 (72.17%), Query Frame = 0 

Query: 10  LMICAISASYLALSSSTAVDFTGDRQFLHLPQESVCRSGSGSIAECQLAA---EFKIPSE 69
           + I  +   + A++S ++ DF        +P ES C   +G+IAEC L+    EF++ SE
Sbjct: 13  IAILTVHFLFAAVTSQSSGDF--------VPIESKC---NGTIAECSLSTAEEEFEMDSE 72

Query: 70  ISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGCSAITRCR 122
           I+RRILATT +YISY A+RRN+VPCSRRGASYYNC+ GA ANPYSRGCSAITRCR
Sbjct: 73  INRRILATT-KYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]
BLAST of CcUC05G088190 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 113.2 bits (282), Expect = 2.4e-25
Identity = 71/135 (52.59%), Postives = 88/135 (65.19%), Query Frame = 0 

Query: 6   IHGFLMICAISASYLALSSSTAVDFTGDRQFLHLPQESVCRSGSGSIAECQLAA------ 65
           I   L+I A+    +A+SS  + +F GD      P E+ CR   G+IAEC ++A      
Sbjct: 13  IFAILLILAVHNWSVAVSSQ-STEFAGD----FPPFETECR---GTIAECSVSAALGDGG 72

Query: 66  -----------EFKIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPAN 124
                      EF++ SEI+RRILA TRRYISY A+RRN++PCSRRGASYYNC+ GA AN
Sbjct: 73  DLFYGGGEMGEEFEMDSEINRRILA-TRRYISYGALRRNTIPCSRRGASYYNCRRGAQAN 132

The following BLAST results are available for this feature:
BLAST of CcUC05G088190 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022138185.11.4e-3872.73protein RALF-like 33 [Momordica charantia][more]
XP_022138421.13.1e-3061.72protein RALF-like 33 [Momordica charantia][more]
XP_028751592.19.8e-2960.00protein RALF-like 33 [Prosopis alba][more]
XP_038875155.11.7e-2859.23protein RALF-like 33 [Benincasa hispida][more]
XP_023000591.12.9e-2858.46protein RALF-like 33 [Cucurbita maxima][more]
BLAST of CcUC05G088190 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M3378.7e-2885.2940S ribosomal protein S21-1 OS=Arabidopsis thaliana OX=3702 GN=RPS21B PE=1 SV=1[more]
Q3E9021.5e-2786.5740S ribosomal protein S21-2 OS=Arabidopsis thaliana OX=3702 GN=RPS21C PE=1 SV=2[more]
P356876.9e-2577.9440S ribosomal protein S21 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS21 PE=3... [more]
Q8L9P82.6e-2456.52Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1[more]
Q418522.6e-2479.1040S ribosomal protein S21 OS=Zea mays OX=4577 GN=RPS21 PE=3 SV=1[more]
BLAST of CcUC05G088190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C8R06.6e-3972.73protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111009419 PE=3 SV=1[more]
A0A6J1C9N41.5e-3061.72protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111009595 PE=3 SV=1[more]
A0A6J1KG891.4e-2858.46protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111494831 PE=3 SV=1[more]
A0A6J1KVY02.4e-2856.92protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111499183 PE=3 SV=1[more]
A0A2P5ERZ02.4e-2866.67Rapid ALkalinization Factor OS=Trema orientale OX=63057 GN=TorRG33x02_159070 PE=... [more]
BLAST of CcUC05G088190 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G53890.16.1e-2985.29Ribosomal protein S21e [more]
AT3G53890.26.1e-2985.29Ribosomal protein S21e [more]
AT5G27700.11.0e-2886.57Ribosomal protein S21e [more]
AT4G15800.11.9e-2556.52ralf-like 33 [more]
AT3G16570.12.4e-2552.59rapid alkalinization factor 23 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 60..121
e-value: 4.4E-28
score: 98.0
IPR038579Ribosomal protein S21e superfamilyGENE3D3.30.1230.20coord: 124..204
e-value: 6.9E-29
score: 101.6
IPR001931Ribosomal protein S21ePFAMPF01249Ribosomal_S21ecoord: 136..199
e-value: 4.1E-26
score: 90.9
IPR001931Ribosomal protein S21ePANTHERPTHR1044240S RIBOSOMAL PROTEIN S21coord: 137..204
NoneNo IPR availablePANTHERPTHR10442:SF1340S RIBOSOMAL PROTEIN S21coord: 137..204

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC05G088190.1CcUC05G088190.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019722 calcium-mediated signaling
biological_process GO:0006412 translation
cellular_component GO:0005576 extracellular region
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome