CcUC05G088150 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGGCGTTTGGATTTTCGACAACGGCGTGATCCGGCTAGTAGACAGGGCGGGGGCAGCGGAGACGACGACGGGAGCGGGAGGACGGAGGAAAGTTCTGATATACACGCCGACGAACGAGGTGATGACGTCGTACGAGGTACTTAAAAACAAGCTGTCAATTTTGGGATGGGAAGTGTACTATGAAGATGGAGAAGTTATGCAATTTCATAAGCCTTCTTCTGTGGATCTAATTTCTCTTCCTACAGATTTTAATAAGCTGAAGGCTAGGCACTTATACGACATCGTTGTGAGAAACCGTAATCTTTTTCAAGTTAAGGACATGCAGTCCCACTAA ATGTCAGGCGTTTGGATTTTCGACAACGGCGTGATCCGGCTAGTAGACAGGGCGGGGGCAGCGGAGACGACGACGGGAGCGGGAGGACGGAGGAAAGTTCTGATATACACGCCGACGAACGAGGTGATGACGTCGTACGAGGTACTTAAAAACAAGCTGTCAATTTTGGGATGGGAAGTGTACTATGAAGATGGAGAAGTTATGCAATTTCATAAGCCTTCTTCTGTGGATCTAATTTCTCTTCCTACAGATTTTAATAAGCTGAAGGCTAGGCACTTATACGACATCGTTGTGAGAAACCGTAATCTTTTTCAAGTTAAGGACATGCAGTCCCACTAA ATGTCAGGCGTTTGGATTTTCGACAACGGCGTGATCCGGCTAGTAGACAGGGCGGGGGCAGCGGAGACGACGACGGGAGCGGGAGGACGGAGGAAAGTTCTGATATACACGCCGACGAACGAGGTGATGACGTCGTACGAGGTACTTAAAAACAAGCTGTCAATTTTGGGATGGGAAGTGTACTATGAAGATGGAGAAGTTATGCAATTTCATAAGCCTTCTTCTGTGGATCTAATTTCTCTTCCTACAGATTTTAATAAGCTGAAGGCTAGGCACTTATACGACATCGTTGTGAGAAACCGTAATCTTTTTCAAGTTAAGGACATGCAGTCCCACTAA MSGVWIFDNGVIRLVDRAGAAETTTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSILGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKDMQSH Homology
BLAST of CcUC05G088150 vs. NCBI nr
Match: KGN57101.1 (hypothetical protein Csa_010574 [Cucumis sativus]) HSP 1 Score: 211.8 bits (538), Expect = 2.9e-51 Identity = 104/113 (92.04%), Postives = 108/113 (95.58%), Query Frame = 0
BLAST of CcUC05G088150 vs. NCBI nr
Match: KAA0049489.1 (flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa] >TYK09613.1 flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 208.0 bits (528), Expect = 4.3e-50 Identity = 102/116 (87.93%), Postives = 107/116 (92.24%), Query Frame = 0
BLAST of CcUC05G088150 vs. NCBI nr
Match: XP_022956217.1 (flowering-promoting factor 1-like protein 1 [Cucurbita moschata] >KAG6582219.1 Flowering-promoting factor 1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018618.1 Flowering-promoting factor 1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 203.0 bits (515), Expect = 1.4e-48 Identity = 99/111 (89.19%), Postives = 105/111 (94.59%), Query Frame = 0
BLAST of CcUC05G088150 vs. NCBI nr
Match: XP_022979994.1 (flowering-promoting factor 1-like protein 1 [Cucurbita maxima]) HSP 1 Score: 201.8 bits (512), Expect = 3.0e-48 Identity = 98/111 (88.29%), Postives = 104/111 (93.69%), Query Frame = 0
BLAST of CcUC05G088150 vs. NCBI nr
Match: XP_023528953.1 (flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 200.7 bits (509), Expect = 6.8e-48 Identity = 97/111 (87.39%), Postives = 104/111 (93.69%), Query Frame = 0
BLAST of CcUC05G088150 vs. ExPASy Swiss-Prot
Match: Q9LGE3 (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAA1 PE=1 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 3.9e-30 Identity = 60/108 (55.56%), Postives = 81/108 (75.00%), Query Frame = 0
BLAST of CcUC05G088150 vs. ExPASy Swiss-Prot
Match: Q0E1D7 (Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0460200 PE=2 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 6.2e-28 Identity = 57/112 (50.89%), Postives = 84/112 (75.00%), Query Frame = 0
BLAST of CcUC05G088150 vs. ExPASy Swiss-Prot
Match: Q8LR63 (Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0933500 PE=2 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 3.4e-26 Identity = 62/127 (48.82%), Postives = 83/127 (65.35%), Query Frame = 0
BLAST of CcUC05G088150 vs. ExPASy Swiss-Prot
Match: O23624 (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 9.9e-26 Identity = 58/110 (52.73%), Postives = 77/110 (70.00%), Query Frame = 0
BLAST of CcUC05G088150 vs. ExPASy Swiss-Prot
Match: Q9LXB5 (Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLP2 PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.3e-25 Identity = 57/110 (51.82%), Postives = 79/110 (71.82%), Query Frame = 0
BLAST of CcUC05G088150 vs. ExPASy TrEMBL
Match: A0A0A0LAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153750 PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.4e-51 Identity = 104/113 (92.04%), Postives = 108/113 (95.58%), Query Frame = 0
BLAST of CcUC05G088150 vs. ExPASy TrEMBL
Match: A0A5A7U7L7 (Flowering-promoting factor 1-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23597G00010 PE=3 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.1e-50 Identity = 102/116 (87.93%), Postives = 107/116 (92.24%), Query Frame = 0
BLAST of CcUC05G088150 vs. ExPASy TrEMBL
Match: A0A6J1GVQ4 (flowering-promoting factor 1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111457977 PE=3 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 6.6e-49 Identity = 99/111 (89.19%), Postives = 105/111 (94.59%), Query Frame = 0
BLAST of CcUC05G088150 vs. ExPASy TrEMBL
Match: A0A6J1IY48 (flowering-promoting factor 1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111479520 PE=3 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.5e-48 Identity = 98/111 (88.29%), Postives = 104/111 (93.69%), Query Frame = 0
BLAST of CcUC05G088150 vs. ExPASy TrEMBL
Match: A0A6J1IC95 (flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111472346 PE=3 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.2e-37 Identity = 80/111 (72.07%), Postives = 89/111 (80.18%), Query Frame = 0
BLAST of CcUC05G088150 vs. TAIR 10
Match: AT5G24860.1 (flowering promoting factor 1 ) HSP 1 Score: 117.5 bits (293), Expect = 7.0e-27 Identity = 58/110 (52.73%), Postives = 77/110 (70.00%), Query Frame = 0
BLAST of CcUC05G088150 vs. TAIR 10
Match: AT5G10625.1 (BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 117.1 bits (292), Expect = 9.2e-27 Identity = 57/110 (51.82%), Postives = 79/110 (71.82%), Query Frame = 0
BLAST of CcUC05G088150 vs. TAIR 10
Match: AT4G31380.1 (FPF1-like protein 1 ) HSP 1 Score: 111.3 bits (277), Expect = 5.0e-25 Identity = 59/124 (47.58%), Postives = 85/124 (68.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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