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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ACCAATCTCCCGGAGATTTCTTATGCATACATTCTGACCCGAGATAGCGCCGTCGCAATTCTCACAAAGCCCAACCGGCAAATTCTTCTCCCTCTCCGTCCGGCCACCCCCATCATCTTCTTCAACCTTCGCCCCTTAGGGCTTGACCATTCGCTAGGGCACAATGAATCGCGACACTGTGTGGTATATATATATATCTATATATAAACACATCTATATATAACATTTATGTAAGTGTCTATCTATACAATATTATATATATATGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATCTAACGTCACAGACTGAGTCACCGAAGCGATCTGGTTGGCATCTTGATCCAAGGGCTAAAAGAGTGTCTGTGATGAAGAACGGTGGTTGATTATAGCATCTTCGTCGTCTTTGTCGTCGTCTCTGCCAGACTGCCACTACCCATCCACCGACCCACTCTGAAGTGTTCGAGCTACGGCGCGAACTGGTCCCGGTAGGGTTTTTTTTTCCATTTGGAATCTTAGCAATCTGAAACTTCAATCCACGCTACTCTTCTTTTCCTGCAAATGGAAAGAAAAGTTGTTGCTAATCAGTAGATTGGTATAATTGAGATGAAAGGGAATGCTGTGCATTTGGTTCTTGCAGGGAAGATTAAGGCGGAAGAAGCGAGGACTTACATTAAGTCCATGTTCATCTGAGTTAACGGTGGGGATCTCCAGAGTGAGAAAGGGGTATAAGCCGCCATAGCCATTCTACTTCTTCTTCTTCGCGTGAAAATTTGGTGGGTACTTTTTTAATTAATTTTCTTTACATATTGTCCCAAGTTTTTGAATTTGGAAGATTCTATCACTAGACATTATATTGACATAGTTTTAGATGTAATGTGGAATCATGAGATTGTAGAAAGGATGAAACCGATTATCATCTTCATGGGTAATGGTTTGAAATATCAAAC mRNA sequence ACCAATCTCCCGGAGATTTCTTATGCATACATTCTGACCCGAGATAGCGCCGTCGCAATTCTCACAAAGCCCAACCGGCAAATTCTTCTCCCTCTCCGTCCGGCCACCCCCATCATCTTCTTCAACCTTCGCCCCTTAGGGCTTGACCATTCGCTAGGGCACAATGAATCGCGACACTGTGTGCATCTTCGTCGTCTTTGTCGTCGTCTCTGCCAGACTGCCACTACCCATCCACCGACCCACTCTGAAGTGTTCGAGCTACGGCGCGAACTGGTCCCGGGAAGATTAAGGCGGAAGAAGCGAGGACTTACATTAAGTCCATGTTCATCTGAGTTAACGGTGGGGATCTCCAGAGTGAGAAAGGGGTATAAGCCGCCATAGCCATTCTACTTCTTCTTCTTCGCGTGAAAATTTGGTGGGTACTTTTTTAATTAATTTTCTTTACATATTGTCCCAAGTTTTTGAATTTGGAAGATTCTATCACTAGACATTATATTGACATAGTTTTAGATGTAATGTGGAATCATGAGATTGTAGAAAGGATGAAACCGATTATCATCTTCATGGGTAATGGTTTGAAATATCAAAC Coding sequence (CDS) ACCAATCTCCCGGAGATTTCTTATGCATACATTCTGACCCGAGATAGCGCCGTCGCAATTCTCACAAAGCCCAACCGGCAAATTCTTCTCCCTCTCCGTCCGGCCACCCCCATCATCTTCTTCAACCTTCGCCCCTTAGGGCTTGACCATTCGCTAGGGCACAATGAATCGCGACACTGTGTGCATCTTCGTCGTCTTTGTCGTCGTCTCTGCCAGACTGCCACTACCCATCCACCGACCCACTCTGAAGTGTTCGAGCTACGGCGCGAACTGGTCCCGGGAAGATTAAGGCGGAAGAAGCGAGGACTTACATTAAGTCCATGTTCATCTGAGTTAACGGTGGGGATCTCCAGAGTGAGAAAGGGGTATAAGCCGCCATAG Protein sequence TNLPEISYAYILTRDSAVAILTKPNRQILLPLRPATPIIFFNLRPLGLDHSLGHNESRHCVHLRRLCRRLCQTATTHPPTHSEVFELRRELVPGRLRRKKRGLTLSPCSSELTVGISRVRKGYKPP
Homology
BLAST of CcUC05G087550 vs. NCBI nr
Match: KAG7018669.1 (hypothetical protein SDJN02_20540 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-09 Identity = 61/136 (44.85%), Postives = 69/136 (50.74%), Query Frame = 0 Query: 3 LPEISYAYILTRDSAVAILTKPNRQILLPLRPATPIIFFNLRPLGLDHSLGHNESRHCVH 62 LPEISYAYILT+ SAV R + L +R + PLGLDH+LG H Sbjct: 478 LPEISYAYILTQGSAV-----NGRFVSLSVR-LRSLPSSTFAPLGLDHALGQQSIATLRH 537
Query: 63 LRRLCRRLCQTATTHPPTHSEVFELRRE------------LVPGRLRRKKRGLTLSPCSS 122 RL R TAT PP HSE+FE RE LV R R KRG TLS S Sbjct: 538 --RLGHRSDLTATADPPIHSEMFEQWREAIGIIDIKECCGLVLARKIRAKRGRTLSSFSP 597
Query: 123 ELTVGISRVRKGYKPP 127 L GISRV K ++PP Sbjct: 598 GL--GISRVGKRFQPP 603
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7018669.1 | 1.1e-09 | 44.85 | hypothetical protein SDJN02_20540 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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