CcUC05G082610 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G082610
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	protein PAIR1 isoform X1
Location	CicolChr05: 1449287 .. 1453441 (+)
RNA-Seq Expression	CcUC05G082610
Synteny	CcUC05G082610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGTTGAAGATAAACAAGGCCTGTGATCTCAATTCTATCTCCGTTCTTCCTCCTCAATCCAGGCATGCGTCTGTTCTTTTTTTATTTTCAGCGTTATATTTTGTTTGAATTACTAGAATTCATGGATAACAATGCGCAAAGAAGTTTAGGTTGATATGTTGTGAACTTAGTAGCTTGACATTTTTTTAAGAACTTATTTCTTTCCCTTCTAGTTGTTTATCGTGTTATGAGTTTTGAAGAATATGGATTTCCTTTTGGTCCTAGCTGCGTTCTTGATGTTTCAGAAGGAATTTGTTGTCTCCGAGCTTTTAAGAGATCGACATTTTAAATTTTACTGCAGATATTTCGAAATTTTTCTTTACTCACAGCTTAGTTTGATTTGTTCTATGATTGGATTGACTTCATTTTTGTCGGTACGATATTCAGTTACTTTAAGTTTGGATAAAAAGAACAGCGGAGTAGGAACTGGAAGGTTTCACACTATAATCTTATCATGAAATTGCAAGCTGAATACATTGTAAACTTGATCCGATCTCTTGAGTTGTACGTCATTATTTTCAATTTTGTTCAGCGCAAAAATGTTCAAGGAAAATATGAAAATTTCTAGTGTATTCTACAACAAAAATATGAATGGTTGATAATCTGTAGGAGGTCAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGACTGTCATCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGGTCAATCTCGGTTCTTCTCTGGATTTTCACATTTAGGACTTTGTTTCTCCATTAAGAAATGAAGGAAACGACACTAAAATGCTATCGCTCTTTGTCTTTCCTTGCGTATTAGCATTGAAGTCAAAACTTGGAGATGGCTCTTTTCATTGTTTAGGAACTACTTATGAATTTTATTTTAATATCTATTTTTTGTCGTAACTAATTTACCAAACAAAGAAAAGATAAGGAAACTATCTCTCGAGTTCTTAAATTTAATTTGAGCTTTTCGTTTGTGTGCAATAAAGTTGTTGTTGCTTCTAAGGAAAAATGAACGAGAAAGAGTGAATGTTTTTTATTCCTTGTATTTAGTTGTCCGGAGAGAAGACTTCACTGATTACTGTTAAGCTTGCCCAGTCTTAGTTGTGTTACTGGTACACATAAATAATTCATATATATATATATATATATGTAATATGCTGGTATTGAATGGGGCTTTCTTGGCTGTCATTCCCATATCTAGCCTCTTCAGAATAGTAACCGATGCAACTTAAGAACATGTGAACACGCATGCGTCTTTCATGGTAATCACTCTTTGAAACAGTTCTCCTCACAGTGGAGCATTCCTTCAATTCTTCATTCTGCAGAATATTATCATATGCGTACCTTTATTTATACAAAATGCTTGTATGAATATGTTTGTCTGGGTATATATCTATTAAGACAGCGCCATGTTAAATGCTCTTAGTTTCTCATGCAATGAGGATCTGACTATGCTGTCGTATTAACTTGAAATAAAGTTCTATGATTATTGTGGCGTTCTTTCTGTTTTCATCTCATCTTATGAATTAACTTTGATGTACCATTTTGTGCGGCAGAGATTTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCCTTTTTTCCTCCTCTAAGTTACTCCAGAGAAGATTGCCAAATGGCACTCTCTAAATCTTCAACCAGTCTAACACAAAGATGGAAATCAACTCCTCTTCCGGACTCTAAGTGTAAGTTCACTATCTTGGACTCATATGACAGACTTAAAACTGTGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAATCCATGAACCGGATGTTTCAATAAGTTCGTTTAAAACTGTTTCAATAGTTTCGTTTGATTTCATTACAGCGTGGTATAACTGTTTGAGTAGGGTAAGTTGATCAACTGCCATTTCTTACAACCTTTATATCTTTCGTGACTTGATTTCATACTTTAGCTTTCCTTTTTCAGGTCAAGTTGGTGAAGAACTTGACCACCGCCTTGGAACTATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCACAGTGATATGCTGCAACTAAACAAAGGGATGAAGCAAGTTTCTCTGGATGGTGAGCTTTGCAATCCCTCAGGCTGTAAAGTAAAGTTGGATGAGAAACTATGTATTACTGCTTGAAAAACACTTTCTGCACTGAAACCTGATGTGTTTGTTCCTCAAGTAGGAACAAAGGTGATGAATATGCTTTATTTGAATTTCAGTTCCTTCATAAAGTAGGATTAAGATTGCTATGTTATGAATGTGTAAAGGGGAAGTGCTCAAATCAGTACAAAATCCTGACCTCAAATTTAAAGCTTCAAGGAAAAAGTATATTAAAATAATATGCTTATTTATTTTTCAAATTGCAGTGGAAGGCATATGGCAAAAGATGCTTGTTAACAGTAGCTCGCTACAATCCATGGTAAAATTGTACTAGATCAATACAATATTTTATCGACCATTAAGTTTCTTTAATTTTGATTGTAATGTCTAAATTGTGCATTCAACTAATGAGCGCAAAGTTCAATGTCAGAACAAAGAGCACGATGACATGAAAGCTACCCTCGATGGAGGCTTCAAATTGATATCCGATCTGCTTGAGAAGGATGCATACCAAGAAAGGCTACATGAGATTTCCGATGTTCTTTCTTCATTGGAAAAGCAAGTAAAAGCATCTCAACTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAAGGTCAGTGCATGTTGTATCAAGTATTGCTATAAATGTACGATAAAAAGGATTTGCCTCCTAACTCCATTCCGGCTATATATACATATTCGTAAAAGTACCCTGCCTAAATTTGTATTCTACTTATTCTTCATTAACTTGTAGGCAATTGTCTGTACCTTGAAGAACCCCTTGCAGAAATTTCCACCTCGCTCTATTCAATCTCCTGAGGTTTGGTTTCTTACTAAATATCGGTCAAATGTCTTAGGCGTTTGTTTCATCCTGAACTGTGTCTCATGGAAGGATTTAATTGCAAATGTCAGGGTACTGCCTGTTTGGATGTTCCACCGCAAAAGCGACATCGATGTAAAATGTATGAATCTCAGGTTTCATAATAACTAACTTGATTCCTTGTGTTTTCATCCATTTCAGATGCAGAAAGTTGTCATATCATAAATGAATAAATTACTGATAATGGTGAATGGGATTAGATTGAATTGATGTATTCCAATCTGAGAGTTCAACTTTCCCTTCTAATGCACAAAATGTAGAATTAGTACCTACAAAAGCTCAATGGTATCTTCCATTCCCGTATATTTTATGGTTCTGATTTATAGCAGTCTGGAAGTTCTCAAGGGGATTATGTGTTATATTCCATTAAATACTATCATATTCCATACGTAGTATAAGCGGGGAGGAAAGAAATTTCCATTTGTCAGTAATGTTATCTTAATGTGGCATGAAAAATCATACTCTTGAGCAGCCACAATATTCTGGTGATTGTTGATGAACTATGGAATTATATGTATTGGTTCTTTGTTGCTTAGCATCTTAAGAGAACTTACTTTTTCCACTTAATATCAGTCAATCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAAGGAGGAAGTAGGACGGTGGAAATCAGTAAAAGTGGGAAAGACGTTTTGCACTAGTAGTGTGGTGAAAAAGGATGATCCAAAGAAAGTAATTCCATTTTCTGAACAGGTACCGATTTGAATTTCATTACGTTTCCTTCTATCACATTACCATTTATTGCGGAAATTGTGCAATTGCATTTTTGATAGCCAATATTAAGTTATTCCTTGATTATTGAATCCGAAATTTACACATTATTCTATGAAGCGAGTAATGATTTCACCTTGGATATTAGCAGTGCTTGGTGCTGGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCGTGA

mRNA sequence

ATGCGGTTGAAGATAAACAAGGCCTGTGATCTCAATTCTATCTCCGTTCTTCCTCCTCAATCCAGGCATGCGAGGTCAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGACTGTCATCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGATTTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCCTTTTTTCCTCCTCTAAGTTACTCCAGAGAAGATTGCCAAATGGCACTCTCTAAATCTTCAACCAGTCTAACACAAAGATGGAAATCAACTCCTCTTCCGGACTCTAAGTGTCAAGTTGGTGAAGAACTTGACCACCGCCTTGGAACTATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCACAGTGATATGCTGCAACTAAACAAAGGGATGAAGCAAGTTTCTCTGGATGTGGAAGGCATATGGCAAAAGATGCTTGTTAACAGTAGCTCGCTACAATCCATGAACAAAGAGCACGATGACATGAAAGCTACCCTCGATGGAGGCTTCAAATTGATATCCGATCTGCTTGAGAAGGATGCATACCAAGAAAGGCTACATGAGATTTCCGATGTTCTTTCTTCATTGGAAAAGCAAGTAAAAGCATCTCAACTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAAGGCAATTGTCTGTACCTTGAAGAACCCCTTGCAGAAATTTCCACCTCGCTCTATTCAATCTCCTGAGGTTTGGTTTCTTACTAAATATCGGTCAAATGTCTTAGGCGTTTGTTTCATCCTGAACTGTGTCTCATGGAAGGATTTAATTGCAAATGTCAGGGTACTGCCTGTTTGGATGTTCCACCGCAAAAGCGACATCGATGTAAAATGTATGAATCTCAGTCAATCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAAGGAGGAAGTAGGACGGTGGAAATCAGTAAAAGTGGGAAAGACGTTTTGCACTAGTAGTGTGGTGAAAAAGGATGATCCAAAGAAAGTAATTCCATTTTCTGAACAGTGCTTGGTGCTGGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCGTGA

Coding sequence (CDS)

ATGCGGTTGAAGATAAACAAGGCCTGTGATCTCAATTCTATCTCCGTTCTTCCTCCTCAATCCAGGCATGCGAGGTCAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGACTGTCATCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGATTTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCCTTTTTTCCTCCTCTAAGTTACTCCAGAGAAGATTGCCAAATGGCACTCTCTAAATCTTCAACCAGTCTAACACAAAGATGGAAATCAACTCCTCTTCCGGACTCTAAGTGTCAAGTTGGTGAAGAACTTGACCACCGCCTTGGAACTATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCACAGTGATATGCTGCAACTAAACAAAGGGATGAAGCAAGTTTCTCTGGATGTGGAAGGCATATGGCAAAAGATGCTTGTTAACAGTAGCTCGCTACAATCCATGAACAAAGAGCACGATGACATGAAAGCTACCCTCGATGGAGGCTTCAAATTGATATCCGATCTGCTTGAGAAGGATGCATACCAAGAAAGGCTACATGAGATTTCCGATGTTCTTTCTTCATTGGAAAAGCAAGTAAAAGCATCTCAACTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAAGGCAATTGTCTGTACCTTGAAGAACCCCTTGCAGAAATTTCCACCTCGCTCTATTCAATCTCCTGAGGTTTGGTTTCTTACTAAATATCGGTCAAATGTCTTAGGCGTTTGTTTCATCCTGAACTGTGTCTCATGGAAGGATTTAATTGCAAATGTCAGGGTACTGCCTGTTTGGATGTTCCACCGCAAAAGCGACATCGATGTAAAATGTATGAATCTCAGTCAATCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAAGGAGGAAGTAGGACGGTGGAAATCAGTAAAAGTGGGAAAGACGTTTTGCACTAGTAGTGTGGTGAAAAAGGATGATCCAAAGAAAGTAATTCCATTTTCTGAACAGTGCTTGGTGCTGGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCGTGA

Protein sequence

MRLKINKACDLNSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQMALSKSSTSLTQRWKSTPLPDSKCQVGEELDHRLGTIENSLNKFGKILDSLHSDMLQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLEKDAYQERLHEISDVLSSLEKQVKASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVWFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDVKCMNLSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGDS

Homology

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BLAST of CcUC05G082610 vs. NCBI nr
Match: XP_038882642.1 (putative recombination initiation defects 3 isoform X2 [Benincasa hispida])

HSP 1 Score: 621.3 bits (1601), Expect = 5.9e-174
Identity = 340/411 (82.73%), Postives = 355/411 (86.37%), Query Frame = 0


Query: 1   MRLKINKACDLNSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDL+SISVLPP SR  RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1   MRLKINKACDLSSISVLPPHSR--RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQMALSKSSTSLTQRWKSTP 120
           LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQ+ALSKSSTSLTQRWK TP
Sbjct: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQLALSKSSTSLTQRWKPTP 120

Query: 121 LPDSKCQVGEELDHRLGTIENSLNKFGKILDSLHSDMLQLNKGMKQVSLDVEGIWQKMLV 180
           LPDSKCQVGEELD RLGTIENSLNKFGKILDSLHSD+LQLNKGMKQ+SLDVEGIWQKMLV
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMLV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLEKDAYQERLHEISDVLSSLEKQVKASQLKL 240
           NSSSLQSMNK+HDDMKATLDGGFKLIS+ L+KDAYQERL+EIS+VLSSLEKQV+ASQLKL
Sbjct: 181 NSSSLQSMNKDHDDMKATLDGGFKLISNQLKKDAYQERLNEISNVLSSLEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVWFLTKYRSNVLGVCFILNCVSWKD 300
           KNDFISTFTQE+KA+VCTLKNPLQKFPP SIQSPE                   C+    
Sbjct: 241 KNDFISTFTQEIKAMVCTLKNPLQKFPPHSIQSPE----------------STACLD--- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMNLSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
                  +P    HR       C    QSASPNVCIRAT VQKEEVGRWKSVKVGKTFCT
Sbjct: 301 -------VPQQKRHR-------CK--IQSASPNVCIRATTVQKEEVGRWKSVKVGKTFCT 360

Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 412
            SV KKDDPKKVIPFSEQ LVLEREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 GSVAKKDDPKKVIPFSEQRLVLEREYRVIVDSDEEIERSFSCLIEEKKTGE 374

[Close]

BLAST of CcUC05G082610 vs. NCBI nr
Match: XP_038882627.1 (putative recombination initiation defects 3 isoform X1 [Benincasa hispida] >XP_038882635.1 putative recombination initiation defects 3 isoform X1 [Benincasa hispida])

HSP 1 Score: 616.7 bits (1589), Expect = 1.5e-172
Identity = 340/412 (82.52%), Postives = 355/412 (86.17%), Query Frame = 0


Query: 1   MRLKINKACDLNSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDL+SISVLPP SR  RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1   MRLKINKACDLSSISVLPPHSR--RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQMALSKSSTSLTQRWKSTP 120
           LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQ+ALSKSSTSLTQRWK TP
Sbjct: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQLALSKSSTSLTQRWKPTP 120

Query: 121 LPDSKCQVGEELDHRLGTIENSLNKFGKILDSLHSDMLQLNKGMKQVSLDVEGIWQKMLV 180
           LPDSKCQVGEELD RLGTIENSLNKFGKILDSLHSD+LQLNKGMKQ+SLDVEGIWQKMLV
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMLV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLEKDAYQERLHEISDVLSSLEKQVKASQLKL 240
           NSSSLQSMNK+HDDMKATLDGGFKLIS+ L+KDAYQERL+EIS+VLSSLEKQV+ASQLKL
Sbjct: 181 NSSSLQSMNKDHDDMKATLDGGFKLISNQLKKDAYQERLNEISNVLSSLEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVWFLTKYRSNVLGVCFILNCVSWKD 300
           KNDFISTFTQE+KA+VCTLKNPLQKFPP SIQSPE                   C+    
Sbjct: 241 KNDFISTFTQEIKAMVCTLKNPLQKFPPHSIQSPE----------------STACLD--- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMNLSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
                  +P    HR       C    QSASPNVCIRAT VQKEEVGRWKSVKVGKTFCT
Sbjct: 301 -------VPQQKRHR-------CK--IQSASPNVCIRATTVQKEEVGRWKSVKVGKTFCT 360

Query: 361 SSVVKKDDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 412
            SV KKDDPKKVIPFSE Q LVLEREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 GSVAKKDDPKKVIPFSEQQRLVLEREYRVIVDSDEEIERSFSCLIEEKKTGE 375

[Close]

BLAST of CcUC05G082610 vs. NCBI nr
Match: XP_008438048.1 (PREDICTED: protein PAIR1 isoform X3 [Cucumis melo])

HSP 1 Score: 596.3 bits (1536), Expect = 2.0e-166
Identity = 328/410 (80.00%), Postives = 345/410 (84.15%), Query Frame = 0


Query: 1   MRLKINKACDLNSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDL+SISVLPPQSR  R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1   MRLKINKACDLSSISVLPPQSR--RLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQMALSKSSTSLTQRWKSTP 120
           LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYS+EDCQ+ LSKSSTSLTQ+W+ +P
Sbjct: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSP 120

Query: 121 LPDSKCQVGEELDHRLGTIENSLNKFGKILDSLHSDMLQLNKGMKQVSLDVEGIWQKMLV 180
           L DSKCQVGEELD RLGTIENSLNKFGKILDSL SD+LQLNKGMKQVSLDVE IWQKMLV
Sbjct: 121 LTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLEKDAYQERLHEISDVLSSLEKQVKASQLKL 240
           NSS LQSMNK+HDDMKA +DGGFKLISD L+KDAYQERLHEISD LSSLEKQV+ASQLKL
Sbjct: 181 NSSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVWFLTKYRSNVLGVCFILNCVSWKD 300
           KNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE       R+  L V           
Sbjct: 241 KNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPE-------RTACLDV----------- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMNLSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
                   P    HR       C    QSASPNVC +ATAVQKEEVG WKSVKVGK FCT
Sbjct: 301 --------PKQKRHR-------CK--IQSASPNVCTQATAVQKEEVGMWKSVKVGKAFCT 360

Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 411
           SSVV +DDP KVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 361 SSVVTRDDPNKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 373

[Close]

BLAST of CcUC05G082610 vs. NCBI nr
Match: KAG6597127.1 (putative recombination initiation defects 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 592.4 bits (1526), Expect = 2.9e-165
Identity = 324/412 (78.64%), Postives = 346/412 (83.98%), Query Frame = 0


Query: 1   MRLKINKACDLNSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDL+SISVLPPQS   RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG  SQ
Sbjct: 1   MRLKINKACDLSSISVLPPQS---RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQMALSKSSTSLTQRWKSTP 120
            SQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSRE+CQ+ LSKSSTSLTQRWKSTP
Sbjct: 61  FSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTP 120

Query: 121 LPDSKCQVGEELDHRLGTIENSLNKFGKILDSLHSDMLQLNKGMKQVSLDVEGIWQKMLV 180
           LPDSKCQVGEELD RLGTIENSLNKFGKILDSLH D+L LN+GMKQ+SLDVEGIWQK++V
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLEKDAYQERLHEISDVLSSLEKQVKASQLKL 240
           NSS LQSMNKEHDDMK+TLDGGFKLISD L+KDAYQERLHEISDVLS+LEKQV+ASQLKL
Sbjct: 181 NSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVWFLTKYRSNVLGVCFILNCVSWKD 300
           +NDFISTFTQEMKA+VCTLK PLQKFP R I+SPE                         
Sbjct: 241 RNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPE------------------------- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMNLSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
              +   L V    R+     +C    QSASP+VCIRATAVQ EEVGRWKSVKVGKTFCT
Sbjct: 301 ---STASLDVPQQKRR-----RCK--IQSASPDVCIRATAVQTEEVGRWKSVKVGKTFCT 360

Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGDS 413
           S+V KK+D KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTGDS
Sbjct: 361 STVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGDS 374

[Close]

BLAST of CcUC05G082610 vs. NCBI nr
Match: XP_008438047.1 (PREDICTED: protein PAIR1 isoform X2 [Cucumis melo])

HSP 1 Score: 591.7 bits (1524), Expect = 5.0e-165
Identity = 328/411 (79.81%), Postives = 345/411 (83.94%), Query Frame = 0


Query: 1   MRLKINKACDLNSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDL+SISVLPPQSR  R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1   MRLKINKACDLSSISVLPPQSR--RLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQMALSKSSTSLTQRWKSTP 120
           LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYS+EDCQ+ LSKSSTSLTQ+W+ +P
Sbjct: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSP 120

Query: 121 LPDSKCQVGEELDHRLGTIENSLNKFGKILDSLHSDMLQLNKGMKQVSLDVEGIWQKMLV 180
           L DSKCQVGEELD RLGTIENSLNKFGKILDSL SD+LQLNKGMKQVSLDVE IWQKMLV
Sbjct: 121 LTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLEKDAYQERLHEISDVLSSLEKQVKASQLKL 240
           NSS LQSMNK+HDDMKA +DGGFKLISD L+KDAYQERLHEISD LSSLEKQV+ASQLKL
Sbjct: 181 NSSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVWFLTKYRSNVLGVCFILNCVSWKD 300
           KNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE       R+  L V           
Sbjct: 241 KNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPE-------RTACLDV----------- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMNLSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
                   P    HR       C    QSASPNVC +ATAVQKEEVG WKSVKVGK FCT
Sbjct: 301 --------PKQKRHR-------CK--IQSASPNVCTQATAVQKEEVGMWKSVKVGKAFCT 360

Query: 361 SSVVKKDDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 411
           SSVV +DDP KVIPFSE QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 361 SSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 374

[Close]

BLAST of CcUC05G082610 vs. ExPASy Swiss-Prot
Match: Q0WWX5 (Putative recombination initiation defects 3 OS=Arabidopsis thaliana OX=3702 GN=PRD3 PE=1 SV=2)

HSP 1 Score: 226.5 bits (576), Expect = 5.6e-58
Identity = 162/430 (37.67%), Postives = 242/430 (56.28%), Query Frame = 0


Query: 1   MRLKINKACDLNSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQH---GM 60
           M++ INKACDL SISV PP  R +        Q + QLRSQ SQQSFSQG SS     G 
Sbjct: 1   MKMNINKACDLKSISVFPPNLRRS-----AEPQASQQLRSQQSQQSFSQGPSSSQRGCGG 60

Query: 61  YSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSREDCQMALSKSSTSLTQRW 120
           +SQ++Q+S DE++ N+QRFSSQ+R+ S+KK +S  PP+++ RED Q+  S+SS+ L++RW
Sbjct: 61  FSQMTQSSIDELLINDQRFSSQERDLSLKKVSSCLPPINHKREDSQLVASRSSSGLSRRW 120

Query: 121 KSTPLPDSKCQVGEELDHRLGTIENSLNKFGKILDSLHSDMLQLNKGMKQVSLDVEGIWQ 180
            S  + +SK Q+ EEL+ R G +E SL++FG +LDS+ SD++Q N+G K+V L+ E I Q
Sbjct: 121 SSASIGESKSQISEELEQRFGMMETSLSRFGMMLDSIQSDIMQANRGTKEVFLETERIQQ 180

Query: 181 KMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLEKDAYQERLHEISDVLSSLEKQVKAS 240
           K+ +  +SLQ + KE  D KA+LDGG K I +   KD  QE+L +I  +L+++ +QV+ +
Sbjct: 181 KLTLQDTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPEQVETA 240

Query: 241 QLKLKNDFISTFTQEMKAIVCTLKNPLQKF-PPRSIQSPEVWFLTKYRSNVLGVCFILN- 300
             K++ +   TFT+E++ ++ +L+ P  +   P + Q      L + R     V   L  
Sbjct: 241 LQKIQREICHTFTREIQ-VLASLRTPEPRVRVPTAPQVKAKENLPEQRGQAAKVLTSLKM 300

Query: 301 ---------CVSWKDLIANVRVLPVWMFHRKSDIDVKCMNLSQSASPN----VCIRATAV 360
                        K+     R  PV   +   +  +K        +PN      ++    
Sbjct: 301 PEPRVQVPAAPQAKENFPEQRG-PVAKSNSFCNTTLKTKQPQFPRNPNDASARAVKPYLS 360

Query: 361 QKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEE-IERSF 411
            K +VG WK+VK  K     S  KK   +K +  SE       +  V++DSDEE I+  F
Sbjct: 361 PKIQVGCWKTVKPEK-----SNFKKRATRKPVK-SESTRTQFEQCSVVIDSDEEDIDGGF 417

[Close]

BLAST of CcUC05G082610 vs. ExPASy Swiss-Prot
Match: Q75RY2 (Protein PAIR1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAIR1 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.9e-27
Identity = 103/288 (35.76%), Postives = 158/288 (54.86%), Query Frame = 0


Query: 1   MRLKINKACDLNSISVLPPQSRHARSNALTTGQQAPQLRSQP-------SQQSFSQGLSS 60
           M+LK+NKACD+ SISVLPP+     S A  +G  A  + SQP       SQQSFSQG S+
Sbjct: 1   MKLKMNKACDIASISVLPPRRTGGSSGASASGSVAVAVASQPRSQPLSQSQQSFSQGASA 60

Query: 61  Q--HGMYSQLSQNSFDEVV-------TNEQRFSSQDRENSIKKNSFFPPLSYS--REDCQ 120
              H   SQ SQ S D+ +       T +QRF   D  +S K+ S  P  S S  RE+ Q
Sbjct: 61  SLLHSQ-SQFSQVSLDDNLLTLLPSPTRDQRFGLHD--DSSKRMSSLPASSASCAREESQ 120

Query: 121 MALSKSSTSLTQRWKSTPLPDSKCQV-GEELDHRLGTIENSLNKFGKILDSLHSDMLQLN 180
           + L+K  ++   RW  +       QV  E+++ +   + +S++K G ++DS+ SD++QLN
Sbjct: 121 LQLAKLPSNPVHRWNPSIADTRSGQVTNEDVERKFQHLASSVHKMGMVVDSVQSDVMQLN 180

Query: 181 KGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLE-KDAYQERLH 240
           + MK+ SLD   I QK+ V  SSLQ + K  DD+KA      K   D     ++   +L+
Sbjct: 181 RAMKEASLDSGSIRQKIAVLESSLQQILKGQDDLKALFGSSTKHNPDQTSVLNSLGSKLN 240

Query: 241 EISDVLSSLEKQVKASQLKLKNDFI----STFTQEMKAIVCTLKNPLQ 265
           EIS  L++L+ Q++A QL+     +    ++ + E+ + + TL+  +Q
Sbjct: 241 EISSTLATLQTQMQARQLQGDQTTVLNSNASKSNEISSTLATLQTQMQ 285

[Close]

BLAST of CcUC05G082610 vs. ExPASy TrEMBL
Match: A0A1S3AVJ5 (protein PAIR1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 9.9e-167
Identity = 328/410 (80.00%), Postives = 345/410 (84.15%), Query Frame = 0


Query: 1   MRLKINKACDLNSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDL+SISVLPPQSR  R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1   MRLKINKACDLSSISVLPPQSR--RLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQMALSKSSTSLTQRWKSTP 120
           LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYS+EDCQ+ LSKSSTSLTQ+W+ +P
Sbjct: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSP 120

Query: 121 LPDSKCQVGEELDHRLGTIENSLNKFGKILDSLHSDMLQLNKGMKQVSLDVEGIWQKMLV 180
           L DSKCQVGEELD RLGTIENSLNKFGKILDSL SD+LQLNKGMKQVSLDVE IWQKMLV
Sbjct: 121 LTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLEKDAYQERLHEISDVLSSLEKQVKASQLKL 240
           NSS LQSMNK+HDDMKA +DGGFKLISD L+KDAYQERLHEISD LSSLEKQV+ASQLKL
Sbjct: 181 NSSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVWFLTKYRSNVLGVCFILNCVSWKD 300
           KNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE       R+  L V           
Sbjct: 241 KNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPE-------RTACLDV----------- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMNLSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
                   P    HR       C    QSASPNVC +ATAVQKEEVG WKSVKVGK FCT
Sbjct: 301 --------PKQKRHR-------CK--IQSASPNVCTQATAVQKEEVGMWKSVKVGKAFCT 360

Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 411
           SSVV +DDP KVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 361 SSVVTRDDPNKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 373

[Close]

BLAST of CcUC05G082610 vs. ExPASy TrEMBL
Match: A0A1S3AV35 (protein PAIR1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 2.4e-165
Identity = 328/411 (79.81%), Postives = 345/411 (83.94%), Query Frame = 0


Query: 1   MRLKINKACDLNSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDL+SISVLPPQSR  R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1   MRLKINKACDLSSISVLPPQSR--RLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQMALSKSSTSLTQRWKSTP 120
           LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYS+EDCQ+ LSKSSTSLTQ+W+ +P
Sbjct: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSP 120

Query: 121 LPDSKCQVGEELDHRLGTIENSLNKFGKILDSLHSDMLQLNKGMKQVSLDVEGIWQKMLV 180
           L DSKCQVGEELD RLGTIENSLNKFGKILDSL SD+LQLNKGMKQVSLDVE IWQKMLV
Sbjct: 121 LTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLEKDAYQERLHEISDVLSSLEKQVKASQLKL 240
           NSS LQSMNK+HDDMKA +DGGFKLISD L+KDAYQERLHEISD LSSLEKQV+ASQLKL
Sbjct: 181 NSSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVWFLTKYRSNVLGVCFILNCVSWKD 300
           KNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE       R+  L V           
Sbjct: 241 KNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPE-------RTACLDV----------- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMNLSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
                   P    HR       C    QSASPNVC +ATAVQKEEVG WKSVKVGK FCT
Sbjct: 301 --------PKQKRHR-------CK--IQSASPNVCTQATAVQKEEVGMWKSVKVGKAFCT 360

Query: 361 SSVVKKDDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 411
           SSVV +DDP KVIPFSE QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 361 SSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 374

[Close]

BLAST of CcUC05G082610 vs. ExPASy TrEMBL
Match: A0A1S4DSK1 (protein PAIR1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 3.2e-165
Identity = 328/412 (79.61%), Postives = 345/412 (83.74%), Query Frame = 0


Query: 1   MRLKINKACDLNSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDL+SISVLPPQSR  R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1   MRLKINKACDLSSISVLPPQSR--RLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQMALSKSSTSLTQRWKSTP 120
           LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYS+EDCQ+ LSKSSTSLTQ+W+ +P
Sbjct: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSP 120

Query: 121 LPDSKCQVGEELDHRLGTIENSLNKFGKILDSLHSDMLQLNKGMKQVSLDVEGIWQKMLV 180
           L DSKCQVGEELD RLGTIENSLNKFGKILDSL SD+LQLNKGMKQVSLDVE IWQKMLV
Sbjct: 121 LTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLEKDAYQERLHEISDVLSSLEKQVKASQLKL 240
           NSS LQSMNK+HDDMKA +DGGFKLISD L+KDAYQERLHEISD LSSLEKQV+ASQLKL
Sbjct: 181 NSSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVWFLTKYRSNVLGVCFILNCVSWKD 300
           KNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE       R+  L V           
Sbjct: 241 KNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPE-------RTACLDV----------- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMNLSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
                   P    HR       C    QSASPNVC +ATAVQKEEVG WKSVKVGK FCT
Sbjct: 301 --------PKQKRHR-------CK--IQSASPNVCTQATAVQKEEVGMWKSVKVGKAFCT 360

Query: 361 SSVVKKDDPKKVIPFSE--QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 411
           SSVV +DDP KVIPFSE  QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 361 SSVVTRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 375

[Close]

BLAST of CcUC05G082610 vs. ExPASy TrEMBL
Match: A0A6J1FY69 (protein PAIR1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 7.1e-165
Identity = 322/411 (78.35%), Postives = 346/411 (84.18%), Query Frame = 0


Query: 1   MRLKINKACDLNSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDL+SISVLPPQS  +RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG  SQ
Sbjct: 1   MRLKINKACDLSSISVLPPQS--SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQMALSKSSTSLTQRWKSTP 120
            SQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSRE+CQ+ LSKSSTSLTQRWKSTP
Sbjct: 61  FSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTP 120

Query: 121 LPDSKCQVGEELDHRLGTIENSLNKFGKILDSLHSDMLQLNKGMKQVSLDVEGIWQKMLV 180
           LPDSKCQVGEELD RLGTIENSLNKFGKILDSLH D+L LN+GMKQ+SLDVEGIWQK++V
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLEKDAYQERLHEISDVLSSLEKQVKASQLKL 240
           NSS LQSMNKEHDDMK+TLDGGFKLISD L+KDAYQERLHEISDVLS+LEKQV+ASQLKL
Sbjct: 181 NSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVWFLTKYRSNVLGVCFILNCVSWKD 300
           +NDFISTFTQEMKA+VCTLK PLQKFP R I+SPE                         
Sbjct: 241 RNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPE------------------------- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMNLSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
              +   L V    R+     +C    QSASP+VCIRATAVQ EEVGRWKSVKVGKTFCT
Sbjct: 301 ---STASLDVPQQKRR-----RCK--IQSASPDVCIRATAVQTEEVGRWKSVKVGKTFCT 360

Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 412
           S+V KK+D KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 STVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGE 374

[Close]

BLAST of CcUC05G082610 vs. ExPASy TrEMBL
Match: A0A6J1FTV4 (protein PAIR1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 1.2e-164
Identity = 322/411 (78.35%), Postives = 345/411 (83.94%), Query Frame = 0


Query: 1   MRLKINKACDLNSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDL+SISVLPPQS   RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG  SQ
Sbjct: 1   MRLKINKACDLSSISVLPPQS---RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQMALSKSSTSLTQRWKSTP 120
            SQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSRE+CQ+ LSKSSTSLTQRWKSTP
Sbjct: 61  FSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTP 120

Query: 121 LPDSKCQVGEELDHRLGTIENSLNKFGKILDSLHSDMLQLNKGMKQVSLDVEGIWQKMLV 180
           LPDSKCQVGEELD RLGTIENSLNKFGKILDSLH D+L LN+GMKQ+SLDVEGIWQK++V
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLEKDAYQERLHEISDVLSSLEKQVKASQLKL 240
           NSS LQSMNKEHDDMK+TLDGGFKLISD L+KDAYQERLHEISDVLS+LEKQV+ASQLKL
Sbjct: 181 NSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVWFLTKYRSNVLGVCFILNCVSWKD 300
           +NDFISTFTQEMKA+VCTLK PLQKFP R I+SPE                         
Sbjct: 241 RNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPE------------------------- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMNLSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
              +   L V    R+     +C    QSASP+VCIRATAVQ EEVGRWKSVKVGKTFCT
Sbjct: 301 ---STASLDVPQQKRR-----RCK--IQSASPDVCIRATAVQTEEVGRWKSVKVGKTFCT 360

Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 412
           S+V KK+D KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 STVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGE 373

[Close]

BLAST of CcUC05G082610 vs. TAIR 10
Match: AT1G01690.1 (putative recombination initiation defects 3 )

HSP 1 Score: 226.5 bits (576), Expect = 4.0e-59
Identity = 162/430 (37.67%), Postives = 242/430 (56.28%), Query Frame = 0


Query: 1   MRLKINKACDLNSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQH---GM 60
           M++ INKACDL SISV PP  R +        Q + QLRSQ SQQSFSQG SS     G 
Sbjct: 1   MKMNINKACDLKSISVFPPNLRRS-----AEPQASQQLRSQQSQQSFSQGPSSSQRGCGG 60

Query: 61  YSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSREDCQMALSKSSTSLTQRW 120
           +SQ++Q+S DE++ N+QRFSSQ+R+ S+KK +S  PP+++ RED Q+  S+SS+ L++RW
Sbjct: 61  FSQMTQSSIDELLINDQRFSSQERDLSLKKVSSCLPPINHKREDSQLVASRSSSGLSRRW 120

Query: 121 KSTPLPDSKCQVGEELDHRLGTIENSLNKFGKILDSLHSDMLQLNKGMKQVSLDVEGIWQ 180
            S  + +SK Q+ EEL+ R G +E SL++FG +LDS+ SD++Q N+G K+V L+ E I Q
Sbjct: 121 SSASIGESKSQISEELEQRFGMMETSLSRFGMMLDSIQSDIMQANRGTKEVFLETERIQQ 180

Query: 181 KMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLEKDAYQERLHEISDVLSSLEKQVKAS 240
           K+ +  +SLQ + KE  D KA+LDGG K I +   KD  QE+L +I  +L+++ +QV+ +
Sbjct: 181 KLTLQDTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPEQVETA 240

Query: 241 QLKLKNDFISTFTQEMKAIVCTLKNPLQKF-PPRSIQSPEVWFLTKYRSNVLGVCFILN- 300
             K++ +   TFT+E++ ++ +L+ P  +   P + Q      L + R     V   L  
Sbjct: 241 LQKIQREICHTFTREIQ-VLASLRTPEPRVRVPTAPQVKAKENLPEQRGQAAKVLTSLKM 300

Query: 301 ---------CVSWKDLIANVRVLPVWMFHRKSDIDVKCMNLSQSASPN----VCIRATAV 360
                        K+     R  PV   +   +  +K        +PN      ++    
Sbjct: 301 PEPRVQVPAAPQAKENFPEQRG-PVAKSNSFCNTTLKTKQPQFPRNPNDASARAVKPYLS 360

Query: 361 QKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEE-IERSF 411
            K +VG WK+VK  K     S  KK   +K +  SE       +  V++DSDEE I+  F
Sbjct: 361 PKIQVGCWKTVKPEK-----SNFKKRATRKPVK-SESTRTQFEQCSVVIDSDEEDIDGGF 417

The following BLAST results are available for this feature:

BLAST of CcUC05G082610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882642.1	5.9e-174	82.73	putative recombination initiation defects 3 isoform X2 [Benincasa hispida]	[more]
XP_038882627.1	1.5e-172	82.52	putative recombination initiation defects 3 isoform X1 [Benincasa hispida] >XP_0...	[more]
XP_008438048.1	2.0e-166	80.00	PREDICTED: protein PAIR1 isoform X3 [Cucumis melo]	[more]
KAG6597127.1	2.9e-165	78.64	putative recombination initiation defects 3, partial [Cucurbita argyrosperma sub...	[more]
XP_008438047.1	5.0e-165	79.81	PREDICTED: protein PAIR1 isoform X2 [Cucumis melo]	[more]

BLAST of CcUC05G082610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WWX5	5.6e-58	37.67	Putative recombination initiation defects 3 OS=Arabidopsis thaliana OX=3702 GN=P...	[more]
Q75RY2	3.9e-27	35.76	Protein PAIR1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAIR1 PE=1 SV=1	[more]

BLAST of CcUC05G082610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AVJ5	9.9e-167	80.00	protein PAIR1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1	[more]
A0A1S3AV35	2.4e-165	79.81	protein PAIR1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1	[more]
A0A1S4DSK1	3.2e-165	79.61	protein PAIR1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1	[more]
A0A6J1FY69	7.1e-165	78.35	protein PAIR1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1	[more]
A0A6J1FTV4	1.2e-164	78.35	protein PAIR1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1	[more]

BLAST of CcUC05G082610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01690.1	4.0e-59	37.67	putative recombination initiation defects 3	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 212..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..54
None	No IPR available	PANTHER	PTHR37695:SF1	RECOMBINATION INITIATION DEFECTS 3-RELATED	coord: 1..410
IPR034546	Protein PAIR1	PANTHER	PTHR37695	RECOMBINATION INITIATION DEFECTS 3-RELATED	coord: 1..410

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G082610.1	CcUC05G082610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051026	chiasma assembly
biological_process	GO:0009553	embryo sac development
biological_process	GO:0042138	meiotic DNA double-strand break formation
biological_process	GO:0048236	plant-type sporogenesis
biological_process	GO:0009555	pollen development
biological_process	GO:0070192	chromosome organization involved in meiotic cell cycle