CcUC04G075770 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGACGAGGACGAGAATCAAATTTGAAAAAAAGAAACCACAACACAGACAATTTGTCAAACTTCAACACCCAATTCTCTACAACTCCACGTGGCACAGTCTTATTGGTAACTCTAACTAATACAAAACCGGAACCATTTCATTTCCAAAAGGTTTAAATACTAATTTATTCTTAGTATTTTTTTATTTTGGTAATTCAAAAGATAGGAACTAAAATAAATATACGAATCAAAGTCAAAATTACATACTACATAGACTAAAATAGTATTTAAATTTTTTGAAAAATACTTAGCATGGTTATATCGTATTTATCTTTGTCCATCTAATTAAAATTTTATGTGACTAATTTGTTAATCTTTTATATTGTTGCTCAAAGAGGATAATTCCTTCCATCTCTAATTCACATAATACCCATATATGCACATATACAAGAGTCATTTTTGGCTAGAATCAAAGGAATATACATGTACACCTAATATGGTAAATTTGGAGTCTATCAAACCACACAATATATGTAATTCTAACATGCATTTTCTCATTCGTATAATATCCATATATACACATTCATAAACACAGCCATCTTTCGCTAAAATCAATGGCATGTACATATATACCTAATTCAAGCATGATCAATTTAAGATTTACCAAATGTACAATATATTTGTAACATTTTTTTATAAATATCTTCTGGTTTTTATTTTTCGTAATATGGGTGGATTGCACAAAAAGGGTGCATCCACCCCATCTAATCACACACAATTTTTTTTTTTAAAGGAAAGAACTTGGTACATCTATTATTTTATCGTGGATAGAAGAATTGGAGGAACATGAGATCTAGGTACTATTTTTTAACATGTTTAAAATTCAAAACTATAATTGGACGGTTAGATTAAATGCGGAAATATTTATGTGTGTATATATATATATATATAGCTTAAATATGCAATTAATTATTTTGTTTTATTTTGATTATTTAAGGAACCCCTTTTTGCCTCTGTTCTGTTTCCAAGTCTCTTCCTTTTCAATCATCCCAATTGACCAAACTTCCTTGGCTCTCTATTTTAGCTCAGTTTCAGATCGGAGCAGCTTCTCTTGAGCTTCAGCCATGGAGGAAAAGGTAGCTTCTCCCTCTTCCCTCCCATCTCCTTCTCCATACCCTTCATCCTGATTTTGATTCTTAATTCCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCAATCCCCTGTTTTTTTTTTTTTTTTTCTTTCTTTTCCTTTCTTTTCTAACGTTTATTAATTCTTCCATTTTATAGAAATTAGAGACCAGCTTTATGATGAGAAACAGGGGTTGGTGAAGATCAAAGTTGTGTGTTGTACGCCTGAAAAAATCATGAAGAAAATTTGTTCTAAAGGCGATGGATCCATTAAAAGCATCGAAATCAAAGAGCCCGAGAAAAAGAAAGAAGAAGCGAAAAAAGAAGAGAAGAAAGAAGAAAAGAAAGAAGAGAAAAAGGAGGAGAAGAAGAAAGAAGAGAAAAAGGAGGAGAAGAAGAAAGAAGAGAAAAAGGAAGAGAAGAAGAAAGAAGAGAAAAAGGAAGAGAAGAAGAAAGAAGAGAAAAAAGAAGAGAAGAAAGAAGAGAAAAAAGAAGAGAAGAAGAAAGAAGAGAAGAAAGAAGAGAAAAAGGAAGGGGAAAAGCCAAAAGTGATGGTGCAACCGGTTCAAGGCTATCCGCCGCTGCCATACTCTGTTCACTGCACTTCATGTTACGAAGGTCGGCCTTGTTACCAATACCACGGCTACGGGATACCGGCGGCGCCACCCTGCTACGTTGGGAGGCCGATTTACGATAGCTATGGCGGTGGCGGTGGGTACGGCGGCGGAAGGGGATATTATGCGGGGCCTTCTTCTGATTACTACAACCCAGAAAATCCAACGGGATGCTCTGTCATGTGATGAATCAAATCCGCTATGAGATGAGACCCATTTTCGTAATTGTGAACCTCACGGTAAATTATGAACAATGTTGAAAATTTGTGTCATTTCTGTTTTTTTGTGTTGAAAAATTACAAGCGTTTCTTTTAAGAAAAATAAAAGAGGGGGGGAAATCAAATGAAATGGAATAGAAGGGTTACTTTTGTTTGTTTGGTTATGTTATGTGTATAAACTATAAAGTTTGTCCTGTTTATAGATTCTCTCAACCAACCAATTATCATATAT ATGGGGACGAGGACGAGAATCAAATTTGAAAAAAAGAAACCACAACACAGACAATTTGTCAAACTTCAACACCCAATTCTCTACAACTCCACGTGGCACAGTCTTATTGAAATTAGAGACCAGCTTTATGATGAGAAACAGGGGTTGGTGAAGATCAAAGTTGTGTGTTGTACGCCTGAAAAAATCATGAAGAAAATTTGTTCTAAAGGCGATGGATCCATTAAAAGCATCGAAATCAAAGAGCCCGAGAAAAAGAAAGAAGAAGCGAAAAAAGAAGAGAAGAAAGAAGAAAAGAAAGAAGAGAAAAAGGAGGAGAAGAAGAAAGAAGAGAAAAAGGAGGAGAAGAAGAAAGAAGAGAAAAAGGAAGAGAAGAAGAAAGAAGAGAAAAAGGAAGAGAAGAAGAAAGAAGAGAAAAAAGAAGAGAAGAAAGAAGAGAAAAAAGAAGAGAAGAAGAAAGAAGAGAAGAAAGAAGAGAAAAAGGAAGGGGAAAAGCCAAAAGTGATGGTGCAACCGGTTCAAGGCTATCCGCCGCTGCCATACTCTGTTCACTGCACTTCATGTTACGAAGGTCGGCCTTGTTACCAATACCACGGCTACGGGATACCGGCGGCGCCACCCTGCTACGTTGGGAGGCCGATTTACGATAGCTATGGCGGTGGCGGTGGGTACGGCGGCGGAAGGGGATATTATGCGGGGCCTTCTTCTGATTACTACAACCCAGAAAATCCAACGGGATGCTCTGTCATGTGATGAATCAAATCCGCTATGAGATGAGACCCATTTTCGTAATTGTGAACCTCACGGTAAATTATGAACAATGTTGAAAATTTGTGTCATTTCTGTTTTTTTGTGTTGAAAAATTACAAGCGTTTCTTTTAAGAAAAATAAAAGAGGGGGGGAAATCAAATGAAATGGAATAGAAGGGTTACTTTTGTTTGTTTGGTTATGTTATGTGTATAAACTATAAAGTTTGTCCTGTTTATAGATTCTCTCAACCAACCAATTATCATATAT ATGGGGACGAGGACGAGAATCAAATTTGAAAAAAAGAAACCACAACACAGACAATTTGTCAAACTTCAACACCCAATTCTCTACAACTCCACGTGGCACAGTCTTATTGAAATTAGAGACCAGCTTTATGATGAGAAACAGGGGTTGGTGAAGATCAAAGTTGTGTGTTGTACGCCTGAAAAAATCATGAAGAAAATTTGTTCTAAAGGCGATGGATCCATTAAAAGCATCGAAATCAAAGAGCCCGAGAAAAAGAAAGAAGAAGCGAAAAAAGAAGAGAAGAAAGAAGAAAAGAAAGAAGAGAAAAAGGAGGAGAAGAAGAAAGAAGAGAAAAAGGAGGAGAAGAAGAAAGAAGAGAAAAAGGAAGAGAAGAAGAAAGAAGAGAAAAAGGAAGAGAAGAAGAAAGAAGAGAAAAAAGAAGAGAAGAAAGAAGAGAAAAAAGAAGAGAAGAAGAAAGAAGAGAAGAAAGAAGAGAAAAAGGAAGGGGAAAAGCCAAAAGTGATGGTGCAACCGGTTCAAGGCTATCCGCCGCTGCCATACTCTGTTCACTGCACTTCATGTTACGAAGGTCGGCCTTGTTACCAATACCACGGCTACGGGATACCGGCGGCGCCACCCTGCTACGTTGGGAGGCCGATTTACGATAGCTATGGCGGTGGCGGTGGGTACGGCGGCGGAAGGGGATATTATGCGGGGCCTTCTTCTGATTACTACAACCCAGAAAATCCAACGGGATGCTCTGTCATGTGA MGTRTRIKFEKKKPQHRQFVKLQHPILYNSTWHSLIEIRDQLYDEKQGLVKIKVVCCTPEKIMKKICSKGDGSIKSIEIKEPEKKKEEAKKEEKKEEKKEEKKEEKKKEEKKEEKKKEEKKEEKKKEEKKEEKKKEEKKEEKKEEKKEEKKKEEKKEEKKEGEKPKVMVQPVQGYPPLPYSVHCTSCYEGRPCYQYHGYGIPAAPPCYVGRPIYDSYGGGGGYGGGRGYYAGPSSDYYNPENPTGCSVM Homology
BLAST of CcUC04G075770 vs. NCBI nr
Match: XP_038882409.1 (protein PXR1-like [Benincasa hispida]) HSP 1 Score: 288.1 bits (736), Expect = 7.2e-74 Identity = 186/215 (86.51%), Postives = 197/215 (91.63%), Query Frame = 0
BLAST of CcUC04G075770 vs. NCBI nr
Match: XP_004134803.2 (protein PXR1 [Cucumis sativus] >KAE8647638.1 hypothetical protein Csa_002777 [Cucumis sativus]) HSP 1 Score: 270.0 bits (689), Expect = 2.0e-68 Identity = 182/215 (84.65%), Postives = 188/215 (87.44%), Query Frame = 0
BLAST of CcUC04G075770 vs. NCBI nr
Match: XP_008440982.1 (PREDICTED: protein PXR1-like [Cucumis melo]) HSP 1 Score: 268.5 bits (685), Expect = 5.9e-68 Identity = 188/217 (86.64%), Postives = 192/217 (88.48%), Query Frame = 0
BLAST of CcUC04G075770 vs. NCBI nr
Match: KAA0025576.1 (protein PXR1-like [Cucumis melo var. makuwa] >TYK12451.1 protein PXR1-like [Cucumis melo var. makuwa]) HSP 1 Score: 258.1 bits (658), Expect = 8.0e-65 Identity = 184/213 (86.38%), Postives = 188/213 (88.26%), Query Frame = 0
BLAST of CcUC04G075770 vs. NCBI nr
Match: KAG7026672.1 (hypothetical protein SDJN02_10675, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 250.0 bits (637), Expect = 2.2e-62 Identity = 178/220 (80.91%), Postives = 191/220 (86.82%), Query Frame = 0
BLAST of CcUC04G075770 vs. ExPASy TrEMBL
Match: A0A0A0KL24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511040 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 9.8e-69 Identity = 182/215 (84.65%), Postives = 188/215 (87.44%), Query Frame = 0
BLAST of CcUC04G075770 vs. ExPASy TrEMBL
Match: A0A1S3B2D2 (protein PXR1-like OS=Cucumis melo OX=3656 GN=LOC103485231 PE=4 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 2.9e-68 Identity = 188/217 (86.64%), Postives = 192/217 (88.48%), Query Frame = 0
BLAST of CcUC04G075770 vs. ExPASy TrEMBL
Match: A0A5D3CKV5 (Protein PXR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00260 PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 3.9e-65 Identity = 184/213 (86.38%), Postives = 188/213 (88.26%), Query Frame = 0
BLAST of CcUC04G075770 vs. ExPASy TrEMBL
Match: A0A6J1KWC2 (protein PXR1-like OS=Cucurbita maxima OX=3661 GN=LOC111497002 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 2.0e-61 Identity = 176/221 (79.64%), Postives = 188/221 (85.07%), Query Frame = 0
BLAST of CcUC04G075770 vs. ExPASy TrEMBL
Match: A0A6J1EG62 (protein PXR1-like OS=Cucurbita moschata OX=3662 GN=LOC111433801 PE=4 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 1.1e-59 Identity = 173/219 (79.00%), Postives = 187/219 (85.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|