CcUC04G072590 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC04G072590
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr04: 29103477 .. 29106712 (-)
RNA-Seq ExpressionCcUC04G072590
SyntenyCcUC04G072590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAATGTTCAGAAGAAGGGAAAAAGAAAATTGTAAAGTCAAAAGGGTAAGAGTTGTTATGCAATTGCAAGGTGCTGAGATTCCATAAATGGAGAATCAAGAAGAAGCAATAGAAAAAAAGGGCACACTACAAAAACAAGTTGAGAATAGTCCTAAGTTTTGGGCATTATGAATTGACAGCATAGATTCACTTAAACCAATGAATTAGAAGGGCTTCAATTATTAAATAGAAGAAGGGTTGGAGGTGTTGAATCCTATATTATAGGGTTTTGGTATTATCCAGGGAGAGTATTTTATGGCATGCACACACTCACTCATAATTTTCGCTTTCTTTAGAGCTTGTAATCATATTCCCTATATAAAACTTTTTACTTAATTAAGCAATAACTTTATTTCTAGCCTTCATTATTGACTCTTCCTAGGTTTCGTTTATCTAAGCAATTTCCTAACTGTTTCTCATTCTTGTTTCAATGTGTTTTGAGACTTCTTCCCTTTGGTTTGTTTCAAAACCACACCAACTTCAACTTTAAGTTGCCATTAAAGTTTCATGAAAACAATGAGATCAGTTTGAGGCATTACATTACAATCTTAATATTCACATCTATTTGTGTTTTTGTTTTGTCACTCTATTTGAATTTTATGTTTGAAACAAAAGTGATAGTTTGGTGATTTCTACATAAATAAAATCTTCTTGTTTCAAAGGTCAAAGGTCACGTAGTGTGAAAACCATATACTGCCTCTTTGGGAATTGGAAGTTTTTTTTTTTTTTTTTTTTTTTCCTCCTAATATCCTAATATCTAGTAAATGGTTGGTGTATTGGTATGAAGCTCAACTAATTTCACATGATAATTTATCTAACATACAAACATATAATGAACTAATATTAAATCTTAGATAGATGTATTAAATATATGTGAAAATATTTTTGGTCTAGTTCATATTTATTTATTTTTTTAATTTGTTTGTAAGAAAAAAAAATTAAATCTAAAGTACAATGTAGACATGTAACATGATCCCCAATGAAAGTATTTATTTTGTGTTTCACTGTACAACCAACCATAAATAAAACTTTGTTGAATTATAGATTTAGCCTAAAATGCAACTTTCAAATTACAAATTTATTCTTAAATCTTTAGTTTTTATTTTAAATTCACGGATATACTAGATAAGAAATTATGGTTGTGTTAGACATTAAATTTATATTTATATTTAAGATATAGAATTAGTTTTGAAAATATTTCACACAACATCCAAAATTTAATAATCTATCAGAAAATAGGTTGAAAATAGAGTTCGTCTTACACAAAGGAGAATCGAAGTCAAATAAATAAGAAATGTGCACATGGAATTAGTCAAAAGAAAGTAAAATTTATGAATTATGAAAGAATTAAAACATATATATGGAAATAATTAGGGAAAAAAAGTGCCATTCGTGGGATTAAATTAATTTCATTTAATTAATAATTAAAATGCTTGTTTTTGTTTTTGTTTTTTTTTTTTTCTTTTTTTTTTTTTACTTTGTAGGACAGCAAAGTGAGTGGGTTTGGTTGGTAAGATTGTGACACCTCTGCCACTGCCACACACCATACCACCGTTTCGTTTTCCGTTGTAAGGAGGGCGTGGTAGAAACGCGCCACCAATAGAAGTTGGTAATAGAAACAGAAGGTGAGGTTATGTTATGTTATGTATGGCGATAGGGTTAAACTTAGGATTGGGGACACGGCCATATTTAATGCATGTTGACGCGAAAAGCGCGTCACCCATGTCGGAGATGATCACACGTAGGCAGCTGCCTTAAATGCCGACAATTTATTTTTTCCTACGTAATTCCGTGTCCTTGTCAACAAACACCCCCACCCACAATCCACACAAACAAAACACTCAAAAAAAAAAAAAAAACTCTATTTTCTCTATGTTCTGTTTTGGCATGCAGAAACTAAAAGCCACGCGCCGTCATACGCGCCATCAGTGAATTTGGAGAGGGTCCCACATCACGTCAGTCCGTTTCAGGTACGGGAATGCGTGCTAATACACACCACAACACCATACAATGGTCTGCACCATTTCTGTGTCGTTTTTGGCCTTTTTGGTTTCCGCGCGTGGCCCTCACTTTTCTCTTCCATATTCTTCTATTGTCTTCTTATTAAGGACCGGTTCCGGTCCACCAATTCACTTATTAACTCTGAAATTAGTGATGTTTAATATGAGTTTTAATTTTTGTAATTTTTGAAGTACACTGTCGTTGAACTTTAACTTTCTTTGGGTACTTGTTTATATTAGTATATAATTAAACTTATATTTCAAAAAAAAAAAAAAAAAATTTAAATACTAACAAAATTGATTTCAAATCCTCCAATCTCTTTTCTACTGAAAAAATTCACTCCAATTTAATTTAGAATAGAATATGAGTGTAACCCATTCCATCAATTCCAATTTTATATTTTCCAAAAAAATTTGTGGAGTAATAGAAGGCAAGTGTTATGTTCTAACTAAATTTTGGTTTAGATTTGACTAGAACTCTTAGATAGCCTTTGTGAAATTTGATTTGGAATGAAAATTTGATTGTGGCCAAATTCAATAACACCCAAATTTCTTTTACTACCTTTTGTTTTAAGTTTGACCAATGTGTGGATGATAATCTCAATCAAAATTCCTAATTTGATAAATATTCCAAGTTGATAAACTTGTTTAAAATATTTTTTTAATTAAAATATTCCCCTTTCTCCAAAACTATATATATATATATATATATATATATTTTGGAGTAGAGTTCGTTATTGTAAATATAAAGTAGAAGAAAAAACATTTTTCAATAGAGTCCAACCGAAGTAACACAATTAAAAGTATGAGGTGAAGTTATATAATTGTGAAGTATATAGTCAAGCAAGGGATTACTTAATTTTTTAAGAAAAAAACATTATAAAGGGTGAGAATTTGAATCCAAAGCCGTAAGTGCTACAAGTTTTTGAGAAAAGTAATTTGAATTTACAGGGAGCAAGAGAGATGTACGAGTTGTTCTAAATTCAAACTTCACCCTTTTCGCTTTTTTTTTTTTTTTTTTTAACTGCGCAGTAATGAAAATAGAAATGTAAAAAAATAGAAAAGAAGAAACAGAGGATGGAAGGGGTGGGGGGGTTAAGTTAACCGGGTAAAGCCGGTGAAAATGGCAGGGTGGGACTGGGGAGAGTACGGGAGCGTTATTTGGTTGGGACTGAGAAACGGCAAAGTATATGA

mRNA sequence

ATGAGAATGTTCAGAAGAAGGGAAAAAGAAAATTGTAAAGTCAAAAGGGGTTTTGGTATTATCCAGGGAGAGTATTTTATGGCATGCACACACTCACTCATAATTTTCGCTTTCTTTAGAGCTTGACAGCAAAGAGGGCGTGGTAGAAACGCGCCACCAATAGAAGTTGGATTGGGGACACGGCCATATTTAATGCATGTTGACGCGAAAAGCGCGTCACCCATGTCGGAGATGATCACACAAACTAAAAGCCACGCGCCGTCATACGCGCCATCAGTGAATTTGGAGAGGGTCCCACATCACGTCAGTCCGTTTCAGGGTGAGAATTTGAATCCAAAGCCGGTGGGACTGGGGAGAGTACGGGAGCGTTATTTGGTTGGGACTGAGAAACGGCAAAGTATATGA

Coding sequence (CDS)

ATGCATGTTGACGCGAAAAGCGCGTCACCCATGTCGGAGATGATCACACAAACTAAAAGCCACGCGCCGTCATACGCGCCATCAGTGAATTTGGAGAGGGTCCCACATCACGTCAGTCCGTTTCAGGGTGAGAATTTGAATCCAAAGCCGGTGGGACTGGGGAGAGTACGGGAGCGTTATTTGGTTGGGACTGAGAAACGGCAAAGTATATGA

Protein sequence

MHVDAKSASPMSEMITQTKSHAPSYAPSVNLERVPHHVSPFQGENLNPKPVGLGRVRERYLVGTEKRQSI
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC04G072590.1CcUC04G072590.1mRNA