CcUC04G070400 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC04G070400
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr04: 27179734 .. 27183173 (+)
RNA-Seq ExpressionCcUC04G070400
SyntenyCcUC04G070400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCACTTGGGAAGGGCAGGCGAAGGGCACCACATTAAGTTTTTCAAAAATATAAGTACAGCCAAATTATGCAAATGGACAGATAAAAACGTTGATTTTTTTTTTTTTTTTTTTTTTTTGTTTTTGGCTAAGTTCACGTGGGACGATAGTGAAAATTTTAAATTCGGAATAATAAGTTATTTGTTAACAGCCTATGGTGTGAAAGGAGGCATCCTATTTAATTTCGTCCTCTTAACATCTTATTTCATAAAAAATCGATAAAACATGAAAAATAAGTAATAAAATATCAATGATTTGAACATATATGATAAAAATAAGAGAAATAGTATCCAATGGACCAACTTTAAGGTATATTTTAAAATGTGGCTCTAATAACTTTATTTTATATTTGTGGGTTTTCACCAAATTTTTCTTATTTTTATCTTACCAAAATATCCTTATCATAATTAGTAATTTTTTTTTTAAAAAAAAAATTATTAATTTGGAAGTTTTGAATGTTTTAATTACGTATGTATTTGGCAAGTTTGAGAAATAGCATATAAGGAAGAGTTTTTTTTTTTTTTTTTTCATTTTTTCTTTTTCCTTTTTTAGATATAAAATTTTCGAACACCTTATTTACTTTTCAAATTTTATTCTTCGGTGGAAAAATTTACAAAAACTATAATTTTTTTTTGTTTTATTTTATTGGTTTTTAAATAAATATAAAAAATAAATTAAAAATTTTATCATACATGTTGTTTTTTTTCTTTTTGGGGGTTTTCACAAGTTTGACATATATTTCTTTTAAATTTACTGTTTTTAGATGTTATGACATTATTTCCTTTTTCATATTTTATTTTTGTTGCGTGTTTTGTTTTTCACTGTGGAAGTTATTTTATGGAAAAAAAAATTCTTTTCAGTATGTTTAATATTATTCTTAAAATAAGAAAGATCGAAGATTATTATAGTAATTAACACATTATATAAAATTTACTAAATTATTTCATGTCAGATAAATTTGTAAGTATTAAAAGCTTTTAACATTGATGTAATATGGGGTACTTTTTGGGCCACTTACGAAGAAATCCCTAAAAAGAATAAAGTTGGTTTGTTTGGAGGAAAGAAATTGAATACGCCACGAGGGCCAATCAAAAAGCTGTTTATTCAATAGAGCAACAATCCAATAAGGAAACATATTAACCAAAAGCCCATAGAGGGAATTGGATCTAATCTTATTAGCCACCTTCTCAGCAAATGTATTAATTTTTGTAGGGATATGAGCAAACGATGGACCCAGGCCTTTTAAGATCGATATCAGCATATCTTAAAATTAGAAACCAAATATGGAACCGACATTATAATTAATTATTACCTTCAGTTTCATTTAAATCCAAAACGATATGAATTTCAGGTACACAAGAGATAGAGAGAGGTTGGAAGAGAAGCAATAATTAAATTTGTTTTATAAGCTAGGCGTAGTTGAGAGCAATTTGAAGGAGGCAGTGGAGAAGCTGAGGAGGCATAGAAAACATAGGCATGTGATCAGAGCCGTTGATTTCCATAACATTTTGAATCCCAGCGTTGGAAATCATCCATTGTTGAAACTCCTTGGGGATTCCTCTGTCTTCCGTACAAATTATATATACTTTTGTGACGGACCCATATTTTTCTTTTGAAAAATTATTTGCCTTGGATAAGTCTTCCATGAACAGTGAACTGGGGCGCAGCAGAGTGTGGCCCAGAACTACATCCTTCGGTAATAATTAACAATTCAGACATCGCACGTGTTATATATATATTATTGCTAGAACACAAATAAACAATTTTAAAAATAGAGAAAATTGAGTAATAAAGAAGAGTAAGACCTGAGGAGGGGAGAGTTGGTAAAGCCTTTTGGCCAAGAAATTGGGTCCGAAAAACATCGATGTTTGAGGCTGAGCTTCGGTTCCATAAGGGCAAAACTGCGTGTCTAGCCAAGCTTCCATGGGGATTTCCGCAGAGTACTTGCATTATTGTATCAACACAGAATTTTATTCTCCAAAAAGAGAAGGTTGAATTTTACCATGAATCTTTGAAACTCCTCTCCAAAATGATGTCGTTGAATTTAAAATTATGCTTATTTCTTCGCAAATTTATATAGTATGGTTTTATGGAAGAATATATGATGTGAATTCTTAGTCCAATACTATAACATAAAATTTTTTTATAAGCTTAGCTTAGATTTTGAAAGTAGATATATTCATGACTAAGAAGAGTTGATTAACTTTAGATTTTGAATGCTAGAAGTATAATTCATATACTTAAATTTTTAAAAAACTCAAATTCCATTTGATAAGCATTTAATTTGGTTTTTGCTTCCATTCGATAAGTATTTAATTTGATTTTAAAAAATTGTGCTTGTATTCTCACGTAATTTTTACCATCATTTCATCTATGAAATACTTCAATTTATAGCCAAATTTAAAAGCACAAATTGTATTTTTTTTAGTTTTTAAAAATTGTTTGTGATTTTAGCGTAGGATTAAGAGTTCAAATTTTTCTTTAAGAAAGAATGAAAACATGCTTAAAAGAATAGTGATGAGTAAGCAAGCATAAATTTTCAAAACATAAAAGTAAAACCAAAATCGTTATCAAATCACACACTCTAAGTGATTAATACATGAAGCTTGAGTCTATTAGAAACAGATTGGAAAGGTTCAATTACGTTCTAGACAATACTCTTAGTTCAAGCTACTAATGTGTGATTTTAAAATCATAAGTTTAGAGATGAATTTTGAAAGTTGAAAATCTTATTAGAAAATTTAAAGACCAATTAAAAACTTGTAATTGAAAAGTAAAATAATAATAATAATAATAATAATAATAATAATAGACCTATACCTGATCTAAGACATAGGAAGGCTTATGGTGAGTATCGGGAACAAAGGCAGTCAAGAAAACAGAAACAGCTATCTTGTCCGAGTACTTCTCCATAGCAACGGCCAAGTTCATCCCGCCAAGGCTATGACCCACCAATATCACCTTTTCATTTGGAGGAAGACGAGCCAAAGTCTTCAACAAAGGCTCAGAATACTCTTCCATCGACCGAATGTCTTGGATCGGCCTCGTGTCGATGCCCGAGGCGGCCATGTCGAGCAGCGTGACGCGGTGGCCAGCAGCCTCGAGTAGTGGTTTGATCTTGAACCAGCTCCAAGCCCCATGGCAAGCTCCATGGACGAGTACAAAATGCTTGTGCTCCATGAGGAAAATTATTTGAGGCTCTTCAAAGTTCAAAATACAAAGGTGTTATTTTAAAATTAGAGAGCATGAGGATGTAATATATGTATTTGATTGAACGTGGAGGAGGAGGGAAAAGTCGTTAGGTCGTTGCAAGTCTTCGGGCTGCCTAATAATTTTTAACTCTTCAGCAGCCAACCCCAGACGAAGAGATGTCCTTTTGATGTCCTTTTGATACAGA

mRNA sequence

ATGGGCGTAGTTGAGAGCAATTTGAAGGAGGCAGTGGAGAAGCTGAGGAGGCATAGAAAACATAGGCATGTGATCAGAGCCGTTGATTTCCATAACATTTTGAATCCCAGCGTTGGAAATCATCCATTGTTGAAACTCCTTGGGGATTCCTCTGTCTTCCACATAGGAAGGCTTATGGTGAGTATCGGGAACAAAGGCAGTCAAGAAAACAGAAACAGCTATCTTGTCCGAGTACTTCTCCATAGCAACGGCCAAGTTCATCCCGCCAAGGCTATGACCCACCAATATCACCTTTTCATTTGGAGGAAGACGAGCCAAAGTCTTCAACAAAGGCTCAGAATACTCTTCCATCGACCGAATGTCTTGGATCGGCCTCGTGTCGATGCCCGAGGCGGCCATGTCGAGCAGCGTGACGCGGTGGCCAGCAGCCTCGAGTAGTGGTTTGATCTTGAACCAGCTCCAAGCCCCATGGCAAGCTCCATGGACGAGTACAAAATGCTTGTGCTCCATGAGGAAAATTATTTGAGGCTCTTCAAAGTTCAAAATACAAAGGTGTTATTTTAAAATTAGAGAGCATGAGGATGTAATATATGTATTTGATTGAACGTGGAGGAGGAGGGAAAAGTCGTTAGGTCGTTGCAAGTCTTCGGGCTGCCTAATAATTTTTAACTCTTCAGCAGCCAACCCCAGACGAAGAGATGTCCTTTTGATGTCCTTTTGATACAGA

Coding sequence (CDS)

ATGGGCGTAGTTGAGAGCAATTTGAAGGAGGCAGTGGAGAAGCTGAGGAGGCATAGAAAACATAGGCATGTGATCAGAGCCGTTGATTTCCATAACATTTTGAATCCCAGCGTTGGAAATCATCCATTGTTGAAACTCCTTGGGGATTCCTCTGTCTTCCACATAGGAAGGCTTATGGTGAGTATCGGGAACAAAGGCAGTCAAGAAAACAGAAACAGCTATCTTGTCCGAGTACTTCTCCATAGCAACGGCCAAGTTCATCCCGCCAAGGCTATGACCCACCAATATCACCTTTTCATTTGGAGGAAGACGAGCCAAAGTCTTCAACAAAGGCTCAGAATACTCTTCCATCGACCGAATGTCTTGGATCGGCCTCGTGTCGATGCCCGAGGCGGCCATGTCGAGCAGCGTGACGCGGTGGCCAGCAGCCTCGAGTAG

Protein sequence

MGVVESNLKEAVEKLRRHRKHRHVIRAVDFHNILNPSVGNHPLLKLLGDSSVFHIGRLMVSIGNKGSQENRNSYLVRVLLHSNGQVHPAKAMTHQYHLFIWRKTSQSLQQRLRILFHRPNVLDRPRVDARGGHVEQRDAVASSLE
Homology
The following BLAST results are available for this feature:
BLAST of CcUC04G070400 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC04G070400 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC04G070400 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC04G070400 vs.
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC04G070400.1CcUC04G070400.1mRNA