CcUC04G069550 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC04G069550
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr04: 26302684 .. 26303088 (+)
RNA-Seq ExpressionCcUC04G069550
SyntenyCcUC04G069550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAATCGTCCAGTTCGCGTAATTCGGAGGAGGTATTGGATGCGGCGCAGCAGTTGATGCAGCTGAGCAACGACGACAATAATAGTAGCAATGTCGCCGTCGTCGTCTCAACGAAGAACAACAAGAACAAGAACAAGAAAAAGATGAAGAAGGATCACGGTGGTGGGGGCGAGGAGGAGGTTGATCAAAAGAGATGCCAAATCGAGTCGTCAGTTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGATGAGAAAGATTGTTGTGATCATCATTCTATTATTTCTCGTCCTAAGAAGAGACGATTCCGATCGATTGAAAGCATATATATGAACACTAAACCCATCAATATTAACGGTAGATTCTCCGCCAACACCATCGTCGGGTGTTGGACACGATGA

mRNA sequence

ATGGAAGAATCGTCCAGTTCGCGTAATTCGGAGGAGGTATTGGATGCGGCGCAGCAGTTGATGCAGCTGAGCAACGACGACAATAATAGTAGCAATGTCGCCGTCGTCGTCTCAACGAAGAACAACAAGAACAAGAACAAGAAAAAGATGAAGAAGGATCACGGTGGTGGGGGCGAGGAGGAGGTTGATCAAAAGAGATGCCAAATCGAGTCGTCAGTTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGATGAGAAAGATTGTTGTGATCATCATTCTATTATTTCTCGTCCTAAGAAGAGACGATTCCGATCGATTGAAAGCATATATATGAACACTAAACCCATCAATATTAACGGTAGATTCTCCGCCAACACCATCGTCGGGTGTTGGACACGATGA

Coding sequence (CDS)

ATGGAAGAATCGTCCAGTTCGCGTAATTCGGAGGAGGTATTGGATGCGGCGCAGCAGTTGATGCAGCTGAGCAACGACGACAATAATAGTAGCAATGTCGCCGTCGTCGTCTCAACGAAGAACAACAAGAACAAGAACAAGAAAAAGATGAAGAAGGATCACGGTGGTGGGGGCGAGGAGGAGGTTGATCAAAAGAGATGCCAAATCGAGTCGTCAGTTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGATGAGAAAGATTGTTGTGATCATCATTCTATTATTTCTCGTCCTAAGAAGAGACGATTCCGATCGATTGAAAGCATATATATGAACACTAAACCCATCAATATTAACGGTAGATTCTCCGCCAACACCATCGTCGGGTGTTGGACACGATGA

Protein sequence

MEESSSSRNSEEVLDAAQQLMQLSNDDNNSSNVAVVVSTKNNKNKNKKKMKKDHGGGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRPKKRRFRSIESIYMNTKPININGRFSANTIVGCWTR
Homology
BLAST of CcUC04G069550 vs. NCBI nr
Match: KAA0025567.1 (hypothetical protein E6C27_scaffold253G00560 [Cucumis melo var. makuwa] >TYK12441.1 hypothetical protein E5676_scaffold255G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 164.5 bits (415), Expect = 6.4e-37
Identity = 102/134 (76.12%), Postives = 107/134 (79.85%), Query Frame = 0

Query: 2   EESSSSRNSEEVLDAAQQLMQLSNDDNNSSNVAVVVSTKNNKNKNKKKMKKD--HGGGGE 61
           EESSSSRNSEEVL AAQQLMQLSNDD NSSNV VVV+ K NK       KKD   GGG E
Sbjct: 3   EESSSSRNSEEVLGAAQQLMQLSNDD-NSSNVDVVVAAKKNK-------KKDCCGGGGRE 62

Query: 62  EEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHH--SII-SRPKKRRFRSIESIYMNTKP 121
           EEVDQKRCQIESS+WLKIEEIFGK DE  CCDHH  SII SRPKKRRFRSI+SIYM TKP
Sbjct: 63  EEVDQKRCQIESSIWLKIEEIFGK-DEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKP 122

Query: 122 ININGRFSANTIVG 131
           +  NGRFS  T+VG
Sbjct: 123 MITNGRFSTKTMVG 127

BLAST of CcUC04G069550 vs. NCBI nr
Match: XP_031742655.1 (uncharacterized protein LOC116404425 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35
Identity = 99/135 (73.33%), Postives = 104/135 (77.04%), Query Frame = 0

Query: 2   EESSSSRNSEEVLDAAQQLMQLSNDDNNSSNVAVVVSTKNNKNKNKKKMKKDHGGGG--- 61
           EESSSS NSEEVL AAQQLMQLSNDDN+S+   VV   K NK   KK    D GGGG   
Sbjct: 3   EESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNK---KKDFGGDGGGGGGCR 62

Query: 62  EEEVDQKRCQIESSVWLKIEEIFGKDDEKD-CCDHHSII--SRPKKRRFRSIESIYMNTK 121
           EEEVDQKRCQIESSVWLKIEEIFGKD+E D CC HHS I  SRPKKRRFRSI+SIYM TK
Sbjct: 63  EEEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQSIYMKTK 122

Query: 122 PININGRFSANTIVG 131
           PI  NGRFS  T+VG
Sbjct: 123 PIT-NGRFSTKTMVG 133

BLAST of CcUC04G069550 vs. NCBI nr
Match: XP_022133223.1 (uncharacterized protein LOC111005872 [Momordica charantia])

HSP 1 Score: 136.7 bits (343), Expect = 1.4e-28
Identity = 85/130 (65.38%), Postives = 97/130 (74.62%), Query Frame = 0

Query: 2   EESSSSRNSEEVLDAAQQLMQLSNDDNNSSNVAVVVSTKNNKNKNKKKMKKDHGGGGEEE 61
           EESS SRN EEVL AAQQLMQLSN+D++SSNV      KNNK       K+  G GGEEE
Sbjct: 3   EESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKKNNK-------KRGGGDGGEEE 62

Query: 62  VDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRPKKR--RFRSIESIYMNTKPINI 121
           VDQKRCQIE+S+W KIEEIFGK++E+   D +S I RPKKR  RFRSI+SIYM TKPI I
Sbjct: 63  VDQKRCQIEASIWSKIEEIFGKEEEELEEDRNS-ICRPKKRRSRFRSIQSIYMTTKPI-I 122

Query: 122 NGRFSANTIV 130
           N RFS N I+
Sbjct: 123 NARFSGNRII 123

BLAST of CcUC04G069550 vs. NCBI nr
Match: KAG6595108.1 (hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132.1 bits (331), Expect = 3.5e-27
Identity = 84/130 (64.62%), Postives = 98/130 (75.38%), Query Frame = 0

Query: 2   EESSSSRNSEEVLDAAQQLMQLSNDDNNSSNVAVVVSTKNNKNKNKKKMKKDHGGGG--E 61
           E SS SRNSEEVLDAAQQL+QLSN+D++SSN   VV+ +N K K   K K+D GG G  E
Sbjct: 4   ESSSCSRNSEEVLDAAQQLVQLSNEDDSSSN---VVTAENKKKKKIMKKKEDGGGDGGEE 63

Query: 62  EEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRPKKRRFRSIESIYMNTKPINI 121
           EEVDQKRCQIE+S+  KIEEIFGKDD+ D  +    I RP KRRFRSI+SIYMNTKP+ +
Sbjct: 64  EEVDQKRCQIETSICSKIEEIFGKDDDDD-EEGCGSICRPNKRRFRSIQSIYMNTKPL-V 123

Query: 122 NGRFSANTIV 130
           N RFS   IV
Sbjct: 124 NARFSGKGIV 128

BLAST of CcUC04G069550 vs. NCBI nr
Match: KGN48398.1 (hypothetical protein Csa_004350 [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 4.6e-27
Identity = 83/113 (73.45%), Postives = 87/113 (76.99%), Query Frame = 0

Query: 2   EESSSSRNSEEVLDAAQQLMQLSNDDNNSSNVAVVVSTKNNKNKNKKKMKKDHGGGG--- 61
           EESSSS NSEEVL AAQQLMQLSNDDN+S+   VV   K NK   KK    D GGGG   
Sbjct: 3   EESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNK---KKDFGGDGGGGGGCR 62

Query: 62  EEEVDQKRCQIESSVWLKIEEIFGKDDEKD-CCDHHSII--SRPKKRRFRSIE 109
           EEEVDQKRCQIESSVWLKIEEIFGKD+E D CC HHS I  SRPKKRRFRSI+
Sbjct: 63  EEEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ 112

BLAST of CcUC04G069550 vs. ExPASy TrEMBL
Match: A0A5A7SLI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00160 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 3.1e-37
Identity = 102/134 (76.12%), Postives = 107/134 (79.85%), Query Frame = 0

Query: 2   EESSSSRNSEEVLDAAQQLMQLSNDDNNSSNVAVVVSTKNNKNKNKKKMKKD--HGGGGE 61
           EESSSSRNSEEVL AAQQLMQLSNDD NSSNV VVV+ K NK       KKD   GGG E
Sbjct: 3   EESSSSRNSEEVLGAAQQLMQLSNDD-NSSNVDVVVAAKKNK-------KKDCCGGGGRE 62

Query: 62  EEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHH--SII-SRPKKRRFRSIESIYMNTKP 121
           EEVDQKRCQIESS+WLKIEEIFGK DE  CCDHH  SII SRPKKRRFRSI+SIYM TKP
Sbjct: 63  EEVDQKRCQIESSIWLKIEEIFGK-DEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKP 122

Query: 122 ININGRFSANTIVG 131
           +  NGRFS  T+VG
Sbjct: 123 MITNGRFSTKTMVG 127

BLAST of CcUC04G069550 vs. ExPASy TrEMBL
Match: A0A6J1BYI0 (uncharacterized protein LOC111005872 OS=Momordica charantia OX=3673 GN=LOC111005872 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 7.0e-29
Identity = 85/130 (65.38%), Postives = 97/130 (74.62%), Query Frame = 0

Query: 2   EESSSSRNSEEVLDAAQQLMQLSNDDNNSSNVAVVVSTKNNKNKNKKKMKKDHGGGGEEE 61
           EESS SRN EEVL AAQQLMQLSN+D++SSNV      KNNK       K+  G GGEEE
Sbjct: 3   EESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKKNNK-------KRGGGDGGEEE 62

Query: 62  VDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRPKKR--RFRSIESIYMNTKPINI 121
           VDQKRCQIE+S+W KIEEIFGK++E+   D +S I RPKKR  RFRSI+SIYM TKPI I
Sbjct: 63  VDQKRCQIEASIWSKIEEIFGKEEEELEEDRNS-ICRPKKRRSRFRSIQSIYMTTKPI-I 122

Query: 122 NGRFSANTIV 130
           N RFS N I+
Sbjct: 123 NARFSGNRII 123

BLAST of CcUC04G069550 vs. ExPASy TrEMBL
Match: A0A0A0KFU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486710 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.2e-27
Identity = 83/113 (73.45%), Postives = 87/113 (76.99%), Query Frame = 0

Query: 2   EESSSSRNSEEVLDAAQQLMQLSNDDNNSSNVAVVVSTKNNKNKNKKKMKKDHGGGG--- 61
           EESSSS NSEEVL AAQQLMQLSNDDN+S+   VV   K NK   KK    D GGGG   
Sbjct: 3   EESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNK---KKDFGGDGGGGGGCR 62

Query: 62  EEEVDQKRCQIESSVWLKIEEIFGKDDEKD-CCDHHSII--SRPKKRRFRSIE 109
           EEEVDQKRCQIESSVWLKIEEIFGKD+E D CC HHS I  SRPKKRRFRSI+
Sbjct: 63  EEEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ 112

BLAST of CcUC04G069550 vs. ExPASy TrEMBL
Match: A0A6J1GFL5 (uncharacterized protein LOC111453726 OS=Cucurbita moschata OX=3662 GN=LOC111453726 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.0e-23
Identity = 80/127 (62.99%), Postives = 90/127 (70.87%), Query Frame = 0

Query: 9   NSEEVLDAAQQLMQLS-----NDDNNSSNVAVVVSTKNNKNKNKKKMKKDHG-----GGG 68
           +SEEVL AAQ LMQLS     +DDN SSNV V V    N     KK+KK HG     GG 
Sbjct: 5   SSEEVLVAAQLLMQLSIEDDDDDDNCSSNVVVAVEKMKN-----KKLKKGHGGDRGDGGE 64

Query: 69  EEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRPKKRRFRSIESIYMNTKPIN 126
           EEEVDQKR QIE+S+WLKIEEIFGKDDE+   D +S I RPKKRRFRS++SIY+ TKPI 
Sbjct: 65  EEEVDQKRYQIETSIWLKIEEIFGKDDEEQ--DFNS-ICRPKKRRFRSLQSIYVTTKPIG 122

BLAST of CcUC04G069550 vs. ExPASy TrEMBL
Match: A0A5E4GFG2 (PREDICTED: CICLE_v10027329mg OS=Prunus dulcis OX=3755 GN=ALMOND_2B008558 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.8e-09
Identity = 51/109 (46.79%), Postives = 69/109 (63.30%), Query Frame = 0

Query: 10  SEEVLDAAQQLMQLSNDDNNSSNVAVVVSTKNNKNKNKKKMKKDHGGGGEEEVDQKRCQI 69
           +E  L AAQQLMQLS++DNN+++ +   S+ ++ NKN K     H G   EEVDQ    I
Sbjct: 2   TESELAAAQQLMQLSDEDNNNNSSS---SSSSSSNKNTK-----HEG---EEVDQSPL-I 61

Query: 70  ESSVWLKIEEIFGKDDEKDCCDHHSIISRPKKRRFRSIESIYMNTKPIN 119
               W KIEEIFGK+++ D         RPKKRR+RS+ SIY+ +KP+N
Sbjct: 62  NVITWAKIEEIFGKEEDVD---------RPKKRRYRSLASIYLTSKPVN 89

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0025567.16.4e-3776.12hypothetical protein E6C27_scaffold253G00560 [Cucumis melo var. makuwa] >TYK1244... [more]
XP_031742655.11.6e-3573.33uncharacterized protein LOC116404425 [Cucumis sativus][more]
XP_022133223.11.4e-2865.38uncharacterized protein LOC111005872 [Momordica charantia][more]
KAG6595108.13.5e-2764.62hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN48398.14.6e-2773.45hypothetical protein Csa_004350 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SLI93.1e-3776.12Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1BYI07.0e-2965.38uncharacterized protein LOC111005872 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A0A0KFU12.2e-2773.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486710 PE=4 SV=1[more]
A0A6J1GFL52.0e-2362.99uncharacterized protein LOC111453726 OS=Cucurbita moschata OX=3662 GN=LOC1114537... [more]
A0A5E4GFG22.8e-0946.79PREDICTED: CICLE_v10027329mg OS=Prunus dulcis OX=3755 GN=ALMOND_2B008558 PE=4 SV... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..64

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC04G069550.1CcUC04G069550.1mRNA