CcUC04G068440 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGCCGACGGCAAAATCCTCGAATACAAATCCCCCACCAGAGTTTTCCAAGTCCTCTCCGATTTCTCCGGCCACCAAATCTCGGACGCCGTTCCGGTCACCCACCATCTCCACCGATCCGCCAAGCTCCTCTCAGGGCACCTCTATTTTCTGATCCCCACAGAAGCGGAAGATCAGAATAAGCGGAAGAAGGCGGTCCGGTTGGAGGAAGCGGAGAAAGAAGGCGGCGGTGGCGGTGGCGGAGTGGTTAGAATAAAGGTGGTTATGACGAAGAAGGAGCTGCAGGAGATGGTTGAAAGAGGGGGAATTACGGCGGAGGAAATGATTTGTAAGATAAAAAGTGGAAGTGGGGAAATTAGTAGCAGAGAATTGGAGGAAGAAGATGAAGAATCGGAGTTGCAAAGATGGAAGCCTCTTCTTGAAACCATACCGGAAAGTGAAGTTGGTTGCTAG ATGAAAGCCGACGGCAAAATCCTCGAATACAAATCCCCCACCAGAGTTTTCCAAGTCCTCTCCGATTTCTCCGGCCACCAAATCTCGGACGCCGTTCCGGTCACCCACCATCTCCACCGATCCGCCAAGCTCCTCTCAGGGCACCTCTATTTTCTGATCCCCACAGAAGCGGAAGATCAGAATAAGCGGAAGAAGGCGGTCCGGTTGGAGGAAGCGGAGAAAGAAGGCGGCGGTGGCGGTGGCGGAGTGGTTAGAATAAAGGTGGTTATGACGAAGAAGGAGCTGCAGGAGATGGTTGAAAGAGGGGGAATTACGGCGGAGGAAATGATTTGTAAGATAAAAAGTGGAAGTGGGGAAATTAGTAGCAGAGAATTGGAGGAAGAAGATGAAGAATCGGAGTTGCAAAGATGGAAGCCTCTTCTTGAAACCATACCGGAAAGTGAAGTTGGTTGCTAG ATGAAAGCCGACGGCAAAATCCTCGAATACAAATCCCCCACCAGAGTTTTCCAAGTCCTCTCCGATTTCTCCGGCCACCAAATCTCGGACGCCGTTCCGGTCACCCACCATCTCCACCGATCCGCCAAGCTCCTCTCAGGGCACCTCTATTTTCTGATCCCCACAGAAGCGGAAGATCAGAATAAGCGGAAGAAGGCGGTCCGGTTGGAGGAAGCGGAGAAAGAAGGCGGCGGTGGCGGTGGCGGAGTGGTTAGAATAAAGGTGGTTATGACGAAGAAGGAGCTGCAGGAGATGGTTGAAAGAGGGGGAATTACGGCGGAGGAAATGATTTGTAAGATAAAAAGTGGAAGTGGGGAAATTAGTAGCAGAGAATTGGAGGAAGAAGATGAAGAATCGGAGTTGCAAAGATGGAAGCCTCTTCTTGAAACCATACCGGAAAGTGAAGTTGGTTGCTAG MKADGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRSAKLLSGHLYFLIPTEAEDQNKRKKAVRLEEAEKEGGGGGGGVVRIKVVMTKKELQEMVERGGITAEEMICKIKSGSGEISSRELEEEDEESELQRWKPLLETIPESEVGC Homology
BLAST of CcUC04G068440 vs. NCBI nr
Match: XP_038882971.1 (uncharacterized protein LOC120074056 [Benincasa hispida]) HSP 1 Score: 240.0 bits (611), Expect = 1.4e-59 Identity = 125/151 (82.78%), Postives = 136/151 (90.07%), Query Frame = 0
BLAST of CcUC04G068440 vs. NCBI nr
Match: KAA0025255.1 (uncharacterized protein E6C27_scaffold541G001040 [Cucumis melo var. makuwa] >TYK07412.1 uncharacterized protein E5676_scaffold202G001390 [Cucumis melo var. makuwa]) HSP 1 Score: 235.0 bits (598), Expect = 4.4e-58 Identity = 127/158 (80.38%), Postives = 136/158 (86.08%), Query Frame = 0
BLAST of CcUC04G068440 vs. NCBI nr
Match: XP_008462573.1 (PREDICTED: uncharacterized protein LOC103500900 [Cucumis melo]) HSP 1 Score: 234.6 bits (597), Expect = 5.7e-58 Identity = 127/159 (79.87%), Postives = 135/159 (84.91%), Query Frame = 0
BLAST of CcUC04G068440 vs. NCBI nr
Match: XP_004143322.2 (uncharacterized protein LOC101213283 [Cucumis sativus] >KGN48264.1 hypothetical protein Csa_003716 [Cucumis sativus]) HSP 1 Score: 232.3 bits (591), Expect = 2.8e-57 Identity = 127/158 (80.38%), Postives = 137/158 (86.71%), Query Frame = 0
BLAST of CcUC04G068440 vs. NCBI nr
Match: XP_022972617.1 (uncharacterized protein LOC111471158 [Cucurbita maxima]) HSP 1 Score: 224.6 bits (571), Expect = 5.9e-55 Identity = 121/154 (78.57%), Postives = 132/154 (85.71%), Query Frame = 0
BLAST of CcUC04G068440 vs. ExPASy TrEMBL
Match: A0A5A7SLB3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001390 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 2.1e-58 Identity = 127/158 (80.38%), Postives = 136/158 (86.08%), Query Frame = 0
BLAST of CcUC04G068440 vs. ExPASy TrEMBL
Match: A0A1S3CHA7 (uncharacterized protein LOC103500900 OS=Cucumis melo OX=3656 GN=LOC103500900 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 2.8e-58 Identity = 127/159 (79.87%), Postives = 135/159 (84.91%), Query Frame = 0
BLAST of CcUC04G068440 vs. ExPASy TrEMBL
Match: A0A0A0KHH5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452650 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 1.4e-57 Identity = 127/158 (80.38%), Postives = 137/158 (86.71%), Query Frame = 0
BLAST of CcUC04G068440 vs. ExPASy TrEMBL
Match: A0A6J1I5B2 (uncharacterized protein LOC111471158 OS=Cucurbita maxima OX=3661 GN=LOC111471158 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.9e-55 Identity = 121/154 (78.57%), Postives = 132/154 (85.71%), Query Frame = 0
BLAST of CcUC04G068440 vs. ExPASy TrEMBL
Match: A0A6J1HG15 (uncharacterized protein LOC111463230 OS=Cucurbita moschata OX=3662 GN=LOC111463230 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 3.7e-55 Identity = 117/156 (75.00%), Postives = 131/156 (83.97%), Query Frame = 0
BLAST of CcUC04G068440 vs. TAIR 10
Match: AT3G10120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03890.1); Has 57 Blast hits to 57 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 86.3 bits (212), Expect = 2.3e-17 Identity = 53/167 (31.74%), Postives = 95/167 (56.89%), Query Frame = 0
BLAST of CcUC04G068440 vs. TAIR 10
Match: AT5G03890.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 76.3 bits (186), Expect = 2.4e-14 Identity = 56/168 (33.33%), Postives = 86/168 (51.19%), Query Frame = 0
BLAST of CcUC04G068440 vs. TAIR 10
Match: AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 1.9e-06 Identity = 32/86 (37.21%), Postives = 52/86 (60.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|