CcUC04G066790 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G066790
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Valine-tRNA ligase
Location	CicolChr04: 23677820 .. 23680363 (-)
RNA-Seq Expression	CcUC04G066790
Synteny	CcUC04G066790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCACAGGTCCATTCGCACGCAAAGGAGCCAAATCGCCATAATCTCGAAGCTTTCTTTAATTGAATCGGAGTTAAATCTTCCGCCATCGGCCACCGCCCTATCTCACCGGCTGTTTCATCGACCCCATCGTTTCAATTTTCAACATCTCTCCGATAATCGCTATTAGGGTTTTCAGAATATTTGACGCGCGATATGCCGATTCGGCGTCCTCTGAGTTTCAAAGTTTCAACGCTTTTTCTTATCGTTTCGACATTCCTGAGCTGCCAGTCAGGTAAACTTTATTCGAAATACATGTGAAATTTTGGTTTTCTTCATTTCTGTTCTTGCTTCGATTTGGTTTTTGTGTTTGTCTTATTTGCAATTTTGAAGTCGAGGATTGAATATTGGAAATGATTTCAGGGGGCGTAGGATCGGGGTTTGTTACGCTTGATTCCATCGTAATATACAAGACGCACGAGTGGTTAGCATCGAAACCAACAGTTTATTTTCAATGTCAAGGGGGAAATAAGACGAAATTGCCTGATGTACAGAAAGAGCATGTTTTATACAGCTTCAATGGTGAAGAATCATGGCAGGTTTGTGGTCTTTCATTGAGTTGTTTTGAACAGTGTTATAGCTTCTCCAACCTTTTCTTCTTCTTTTCATGTCGACTTTATTGGATGCTCTAATTTCACTTGAATGAGCTAGGTATGTGCTATGGCATGTTTGTGATTGATAATCATTTTTGTCAAGCTAAAAATTGCGCCGAAATATCACTTTTCAAACATGGGTAAAAAATCAACATCTCTGGACAAAAAATCACTCGGTGGAACCGTAGTATCCTGTTTGCGTCTAATTATGTAATGATTGAAGTTCTGACACAAATTGGATAATAACATAGCAATAGGACATTCGTATATGACAAGTTTAACTTTCGTGTATGTTCACTCTAAACAAAGACCCTGTGAACTCTTTGTTGCAAAAAAACACGATCAAAGTAATGAGGGTGAGGAGTTCTGTTTTGGTGTCTTTATGAATAGATAAAGGGAATTGCATACACAGTAACAAATGGCACTGTTTACTATTTTTGATCTGGTTCCAATGTTTGAAATACTATCTCTGTGTTTTCAGCCATTGACTGAATTTGAAAGCAAAAAGTGCAAGCGATGTGGGTTCTATGAAGAGGACAGCATTAAATCTGACGATGTATTTGAAGAATGGGAGTTTTGTCCATCTGATTTCACAGCTCCTGCTGGAAAATATGTAAGATTCAATGCAAAAGAGTTCAATGCCACTTTTCTATGCTTGCAGTGCACAGCATATTCCAAAGGTGAGTTGTAATATACTATAGTTTATTACTCTGAGATTAATTGAATTAATATTGCCGGTCATACAACAAATTAAGAGCTTGGTTAGATTGAGTTTCCGAGTGCTTAGAAAAGTAGTTCTAAGTGCTTAAGAGCCTGTTTAATATTGCCTCCATAGAACATATTTCAATGTTTAGATAAATTTTCTAAGTGGTTGAGAGTCTACCAGTCCAAACATTGGTCCTAAGTAGGAGATTTCTACCGTTTATGATTCTGAGTATTTGGTGAGTTTTAAAGTACTGAAGAATTTAGTTCCCTTCTAATGTGAATGATCATATTGCCTTCATCTACTAATCGTGGTCCTTCTGGCATTCACATACTTTTACATTTTGATATTTTAACTGCAAATCACCGATACTTTAGTTGTTTTACATGGAAACATTTGAGTTTGTGAACATAAATAGAAGCTTTGTTGTTTTTAGAATCCTTCAAATCCTGCATCACTTGTTTTTAGAATCCTTCAAATCCTGCATCACTTGTTGTTTCCTTTCAGTTTTGACTCATTTACTTTAGATTAGAATAATGCAACTATATACTCCACACCCTCGGAGGGAATGCCAAGAACCTCGTGAGTTTTAAGAACACATGCAGAGCCTAAGCCATGAACTTGAACTCATGCTTCCTGCTTAATTATTTCGAACAAATCTGTGTGACTGTAGCTCTATCGACATGTCCACGTGTTTTCAAAGCATTACAATCTTCATTTAAGATTGTCTAAAAATTGGGTACTTGCTTGCAGTTACCAGTACAATTTCACCTTTGCATGACGGAGAAAAGGGAATGCATTCTGCTGTAGTCATAGTTATCAGTGTTGTGGCTTCAATTGTGTTGATTATTGGTATGGTGGTTGGTTACAAATATTGGCAAAAAAAGAGAAGAGAGCAAGATCAGGCCAGGTTTCTGAGGCTGTTTGAAGATGGGGATGACATTGAGGATGAATTGGGCCTTAGCGATGTGATTTGAGAGTTGGTATACTTAAAAAGGAAAAAGTCACATATGTACAGAGATACACTTTTGTTTTATTATTATTTTTTAAAAGTTAAACAACAAATGGGTATAGAAAAATTCAAACCTTTGACGGGTTGAGACAGTAACCAATTTGAGCTATGTTTAGGTTTAGCTGACGTATAGAAACACATTCTGCATAATCTCTCTATTACCTTTGGACTAGAATATAAATAAACATAAAGTTTCTGC

mRNA sequence

CCCACAGGTCCATTCGCACGCAAAGGAGCCAAATCGCCATAATCTCGAAGCTTTCTTTAATTGAATCGGAGTTAAATCTTCCGCCATCGGCCACCGCCCTATCTCACCGGCTGTTTCATCGACCCCATCGTTTCAATTTTCAACATCTCTCCGATAATCGCTATTAGGGTTTTCAGAATATTTGACGCGCGATATGCCGATTCGGCGTCCTCTGAGTTTCAAAGTTTCAACGCTTTTTCTTATCGTTTCGACATTCCTGAGCTGCCAGTCAGGGGGCGTAGGATCGGGGTTTGTTACGCTTGATTCCATCGTAATATACAAGACGCACGAGTGGTTAGCATCGAAACCAACAGTTTATTTTCAATGTCAAGGGGGAAATAAGACGAAATTGCCTGATGTACAGAAAGAGCATGTTTTATACAGCTTCAATGGTGAAGAATCATGGCAGCCATTGACTGAATTTGAAAGCAAAAAGTGCAAGCGATGTGGGTTCTATGAAGAGGACAGCATTAAATCTGACGATGTATTTGAAGAATGGGAGTTTTGTCCATCTGATTTCACAGCTCCTGCTGGAAAATATGTAAGATTCAATGCAAAAGAGTTCAATGCCACTTTTCTATGCTTGCAGTGCACAGCATATTCCAAAGTTACCAGTACAATTTCACCTTTGCATGACGGAGAAAAGGGAATGCATTCTGCTGTAGTCATAGTTATCAGTGTTGTGGCTTCAATTGTGTTGATTATTGGTATGGTGGTTGGTTACAAATATTGGCAAAAAAAGAGAAGAGAGCAAGATCAGGCCAGGTTTCTGAGGCTGTTTGAAGATGGGGATGACATTGAGGATGAATTGGGCCTTAGCGATGTGATTTGAGAGTTGGTATACTTAAAAAGGAAAAAGTCACATATGTACAGAGATACACTTTTGTTTTATTATTATTTTTTAAAAGTTAAACAACAAATGGGTATAGAAAAATTCAAACCTTTGACGGGTTGAGACAGTAACCAATTTGAGCTATGTTTAGGTTTAGCTGACGTATAGAAACACATTCTGCATAATCTCTCTATTACCTTTGGACTAGAATATAAATAAACATAAAGTTTCTGC

Coding sequence (CDS)

ATGCCGATTCGGCGTCCTCTGAGTTTCAAAGTTTCAACGCTTTTTCTTATCGTTTCGACATTCCTGAGCTGCCAGTCAGGGGGCGTAGGATCGGGGTTTGTTACGCTTGATTCCATCGTAATATACAAGACGCACGAGTGGTTAGCATCGAAACCAACAGTTTATTTTCAATGTCAAGGGGGAAATAAGACGAAATTGCCTGATGTACAGAAAGAGCATGTTTTATACAGCTTCAATGGTGAAGAATCATGGCAGCCATTGACTGAATTTGAAAGCAAAAAGTGCAAGCGATGTGGGTTCTATGAAGAGGACAGCATTAAATCTGACGATGTATTTGAAGAATGGGAGTTTTGTCCATCTGATTTCACAGCTCCTGCTGGAAAATATGTAAGATTCAATGCAAAAGAGTTCAATGCCACTTTTCTATGCTTGCAGTGCACAGCATATTCCAAAGTTACCAGTACAATTTCACCTTTGCATGACGGAGAAAAGGGAATGCATTCTGCTGTAGTCATAGTTATCAGTGTTGTGGCTTCAATTGTGTTGATTATTGGTATGGTGGTTGGTTACAAATATTGGCAAAAAAAGAGAAGAGAGCAAGATCAGGCCAGGTTTCTGAGGCTGTTTGAAGATGGGGATGACATTGAGGATGAATTGGGCCTTAGCGATGTGATTTGA

Protein sequence

MPIRRPLSFKVSTLFLIVSTFLSCQSGGVGSGFVTLDSIVIYKTHEWLASKPTVYFQCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPSDFTAPAGKYVRFNAKEFNATFLCLQCTAYSKVTSTISPLHDGEKGMHSAVVIVISVVASIVLIIGMVVGYKYWQKKRREQDQARFLRLFEDGDDIEDELGLSDVI

Homology

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BLAST of CcUC04G066790 vs. NCBI nr
Match: XP_038883476.1 (uncharacterized protein LOC120074430 isoform X1 [Benincasa hispida])

HSP 1 Score: 416.0 bits (1068), Expect = 2.1e-112
Identity = 201/225 (89.33%), Postives = 214/225 (95.11%), Query Frame = 0


Query: 1   MPIRRPLSFKVSTLFLIVSTFLSCQSGGVGSGFVTLDSIVIYKTHEWLASKPTVYFQCQG 60
           MPIR  L+F+VST+FL+VSTFLSC SGGV S  VTLDSIVIYKTHEWLAS+PTVYFQCQG
Sbjct: 1   MPIRCTLNFRVSTVFLLVSTFLSCHSGGVESAVVTLDSIVIYKTHEWLASEPTVYFQCQG 60

Query: 61  GNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120
           GNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPS
Sbjct: 61  GNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120

Query: 121 DFTAPAGKYVRFNAKEFNATFLCLQCTAYSKVTSTISPLHDGEKGMHSAVVIVISVVASI 180
           DFTAPAGKYVRFNA+EFNATFLCLQCTAYS VTS+  P +DGEKGMHSAV+IVISVVAS 
Sbjct: 121 DFTAPAGKYVRFNAEEFNATFLCLQCTAYSNVTSSSFPSYDGEKGMHSAVIIVISVVAST 180

Query: 181 VLIIGMVVGYKYWQKKRREQDQARFLRLFEDGDDIEDELGLSDVI 226
           VLI+GMVVGYKYWQ+KRREQDQARFL+LFEDGDDIEDELGLS+VI
Sbjct: 181 VLILGMVVGYKYWQQKRREQDQARFLKLFEDGDDIEDELGLSEVI 225

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BLAST of CcUC04G066790 vs. NCBI nr
Match: XP_022143802.1 (uncharacterized protein LOC111013628 [Momordica charantia])

HSP 1 Score: 397.1 bits (1019), Expect = 9.9e-107
Identity = 188/225 (83.56%), Postives = 206/225 (91.56%), Query Frame = 0


Query: 1   MPIRRPLSFKVSTLFLIVSTFLSCQSGGVGSGFVTLDSIVIYKTHEWLASKPTVYFQCQG 60
           MPIR  L+F+VS++FLIVS FL+C +GG  S  VTLDS++IYKTHEWLASKPTVYFQCQG
Sbjct: 1   MPIRCTLNFRVSSIFLIVSAFLNCVAGGAESAVVTLDSVMIYKTHEWLASKPTVYFQCQG 60

Query: 61  GNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120
           GNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPS
Sbjct: 61  GNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120

Query: 121 DFTAPAGKYVRFNAKEFNATFLCLQCTAYSKVTSTISPLHDGEKGMHSAVVIVISVVASI 180
           DFTAPAGKYVRFN KEFNATF+CLQCTAYS V+S+ +P H+ E+GMH A +IVIS + S 
Sbjct: 121 DFTAPAGKYVRFNEKEFNATFMCLQCTAYSNVSSSSAPTHNSEQGMHVAAIIVISALVST 180

Query: 181 VLIIGMVVGYKYWQKKRREQDQARFLRLFEDGDDIEDELGLSDVI 226
           VLIIG+VVGYKYWQKKRREQDQARFL+LFEDGDDIEDELGL DVI
Sbjct: 181 VLIIGIVVGYKYWQKKRREQDQARFLKLFEDGDDIEDELGLGDVI 225

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BLAST of CcUC04G066790 vs. NCBI nr
Match: XP_004142096.1 (uncharacterized protein LOC101220441 [Cucumis sativus] >KGN54203.1 hypothetical protein Csa_018036 [Cucumis sativus])

HSP 1 Score: 392.9 bits (1008), Expect = 1.9e-105
Identity = 192/229 (83.84%), Postives = 205/229 (89.52%), Query Frame = 0


Query: 1   MPIRRPLSFKVSTLFLIVSTFLSCQSGGVGSGFVTLDSIVIYKTHEWLASKPTVYFQCQG 60
           MPIR  L+F+VS  FL+VSTFLSC S G  S  VTLDSIVIYKTHEWLA+KPTVYF CQG
Sbjct: 1   MPIRCTLNFRVSAFFLLVSTFLSCHSEGAESAVVTLDSIVIYKTHEWLAAKPTVYFHCQG 60

Query: 61  GNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120
           GN+T LPDVQKEHVLYSFNGEESWQPLTEF+SKKCKRCGFYEEDSIKSDDVFEEWEFCPS
Sbjct: 61  GNRTTLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120

Query: 121 DFTAPAGKYVRFNAKEFNATFLCLQCTAYSKVTSTISPLHD----GEKGMHSAVVIVISV 180
           DFTAPAGKYVRFN KEFNATFLCL+CTAYS VTST S        GEKGM SA++IVIS+
Sbjct: 121 DFTAPAGKYVRFNPKEFNATFLCLKCTAYSNVTSTSSSTSSITDGGEKGMQSAIIIVISI 180

Query: 181 VASIVLIIGMVVGYKYWQKKRREQDQARFLRLFEDGDDIEDELGLSDVI 226
           VAS+VLIIGMVVGYKYWQKKRR+QDQARFL+LFEDGDDIEDELGLSDVI
Sbjct: 181 VASVVLIIGMVVGYKYWQKKRRQQDQARFLKLFEDGDDIEDELGLSDVI 229

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BLAST of CcUC04G066790 vs. NCBI nr
Match: XP_008447337.1 (PREDICTED: uncharacterized protein LOC103489806 [Cucumis melo])

HSP 1 Score: 389.4 bits (999), Expect = 2.1e-104
Identity = 191/229 (83.41%), Postives = 202/229 (88.21%), Query Frame = 0


Query: 1   MPIRRPLSFKVSTLFLIVSTFLSCQSGGVGSGFVTLDSIVIYKTHEWLASKPTVYFQCQG 60
           MPIR  L F+V   FL+  TFLSC SGG  S  VTLDSIVIYKTHEWLA+KPTVYF C G
Sbjct: 1   MPIRCTLKFRVLAFFLLFWTFLSCHSGGAESAVVTLDSIVIYKTHEWLAAKPTVYFHCLG 60

Query: 61  GNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120
           GNKT LPDVQKEHVLYSFNGEESWQPLTEF+SKKCKRCGFYEEDSIKSDDVFEEWEFCPS
Sbjct: 61  GNKTTLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120

Query: 121 DFTAPAGKYVRFNAKEFNATFLCLQCTAYSKVTSTISPLHD----GEKGMHSAVVIVISV 180
           DFT+PAGKYVRFN KEFNATFLCLQCTAYS VTST S        GEKGMH+AV+IVIS+
Sbjct: 121 DFTSPAGKYVRFNPKEFNATFLCLQCTAYSNVTSTSSSTSSSTDGGEKGMHAAVIIVISI 180

Query: 181 VASIVLIIGMVVGYKYWQKKRREQDQARFLRLFEDGDDIEDELGLSDVI 226
           VASIVLI+GMVVGYKYWQKKRR+QDQARFL+LFEDGDDIEDELGLSDVI
Sbjct: 181 VASIVLILGMVVGYKYWQKKRRQQDQARFLKLFEDGDDIEDELGLSDVI 229

[Close]

BLAST of CcUC04G066790 vs. NCBI nr
Match: XP_023518189.1 (uncharacterized protein LOC111781731 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.1 bits (993), Expect = 1.0e-103
Identity = 187/225 (83.11%), Postives = 202/225 (89.78%), Query Frame = 0


Query: 1   MPIRRPLSFKVSTLFLIVSTFLSCQSGGVGSGFVTLDSIVIYKTHEWLASKPTVYFQCQG 60
           MPIRR  SFKV T+FL+VS  LSC SGG  S  VTLDSIVIYKTHEWLASKPTVYF+CQG
Sbjct: 1   MPIRRSTSFKVLTVFLLVSASLSCCSGGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQG 60

Query: 61  GNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120
           GNKTKLPDVQK HVLYSFNGEESWQPLTEF+SKKCKRCGFYEEDSIKSDDVFEEWE CPS
Sbjct: 61  GNKTKLPDVQKVHVLYSFNGEESWQPLTEFKSKKCKRCGFYEEDSIKSDDVFEEWELCPS 120

Query: 121 DFTAPAGKYVRFNAKEFNATFLCLQCTAYSKVTSTISPLHDGEKGMHSAVVIVISVVASI 180
           DFTAP G+YVR+N KEFNATFLCL+CTAYS VTS+ S   D EKGMH+A +I+ISV+ S 
Sbjct: 121 DFTAPDGEYVRYNKKEFNATFLCLECTAYSNVTSSSSHSQDTEKGMHAAAIILISVIVST 180

Query: 181 VLIIGMVVGYKYWQKKRREQDQARFLRLFEDGDDIEDELGLSDVI 226
           VLIIGMV+GYKYWQKKRREQDQARFL+LFEDGDDIEDELGL+DVI
Sbjct: 181 VLIIGMVIGYKYWQKKRREQDQARFLKLFEDGDDIEDELGLNDVI 225

[Close]

BLAST of CcUC04G066790 vs. ExPASy TrEMBL
Match: A0A6J1CRX4 (uncharacterized protein LOC111013628 OS=Momordica charantia OX=3673 GN=LOC111013628 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.8e-107
Identity = 188/225 (83.56%), Postives = 206/225 (91.56%), Query Frame = 0


Query: 1   MPIRRPLSFKVSTLFLIVSTFLSCQSGGVGSGFVTLDSIVIYKTHEWLASKPTVYFQCQG 60
           MPIR  L+F+VS++FLIVS FL+C +GG  S  VTLDS++IYKTHEWLASKPTVYFQCQG
Sbjct: 1   MPIRCTLNFRVSSIFLIVSAFLNCVAGGAESAVVTLDSVMIYKTHEWLASKPTVYFQCQG 60

Query: 61  GNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120
           GNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPS
Sbjct: 61  GNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120

Query: 121 DFTAPAGKYVRFNAKEFNATFLCLQCTAYSKVTSTISPLHDGEKGMHSAVVIVISVVASI 180
           DFTAPAGKYVRFN KEFNATF+CLQCTAYS V+S+ +P H+ E+GMH A +IVIS + S 
Sbjct: 121 DFTAPAGKYVRFNEKEFNATFMCLQCTAYSNVSSSSAPTHNSEQGMHVAAIIVISALVST 180

Query: 181 VLIIGMVVGYKYWQKKRREQDQARFLRLFEDGDDIEDELGLSDVI 226
           VLIIG+VVGYKYWQKKRREQDQARFL+LFEDGDDIEDELGL DVI
Sbjct: 181 VLIIGIVVGYKYWQKKRREQDQARFLKLFEDGDDIEDELGLGDVI 225

[Close]

BLAST of CcUC04G066790 vs. ExPASy TrEMBL
Match: A0A0A0KXD0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293130 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.1e-106
Identity = 192/229 (83.84%), Postives = 205/229 (89.52%), Query Frame = 0


Query: 1   MPIRRPLSFKVSTLFLIVSTFLSCQSGGVGSGFVTLDSIVIYKTHEWLASKPTVYFQCQG 60
           MPIR  L+F+VS  FL+VSTFLSC S G  S  VTLDSIVIYKTHEWLA+KPTVYF CQG
Sbjct: 1   MPIRCTLNFRVSAFFLLVSTFLSCHSEGAESAVVTLDSIVIYKTHEWLAAKPTVYFHCQG 60

Query: 61  GNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120
           GN+T LPDVQKEHVLYSFNGEESWQPLTEF+SKKCKRCGFYEEDSIKSDDVFEEWEFCPS
Sbjct: 61  GNRTTLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120

Query: 121 DFTAPAGKYVRFNAKEFNATFLCLQCTAYSKVTSTISPLHD----GEKGMHSAVVIVISV 180
           DFTAPAGKYVRFN KEFNATFLCL+CTAYS VTST S        GEKGM SA++IVIS+
Sbjct: 121 DFTAPAGKYVRFNPKEFNATFLCLKCTAYSNVTSTSSSTSSITDGGEKGMQSAIIIVISI 180

Query: 181 VASIVLIIGMVVGYKYWQKKRREQDQARFLRLFEDGDDIEDELGLSDVI 226
           VAS+VLIIGMVVGYKYWQKKRR+QDQARFL+LFEDGDDIEDELGLSDVI
Sbjct: 181 VASVVLIIGMVVGYKYWQKKRRQQDQARFLKLFEDGDDIEDELGLSDVI 229

[Close]

BLAST of CcUC04G066790 vs. ExPASy TrEMBL
Match: A0A1S3BH72 (uncharacterized protein LOC103489806 OS=Cucumis melo OX=3656 GN=LOC103489806 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.0e-104
Identity = 191/229 (83.41%), Postives = 202/229 (88.21%), Query Frame = 0


Query: 1   MPIRRPLSFKVSTLFLIVSTFLSCQSGGVGSGFVTLDSIVIYKTHEWLASKPTVYFQCQG 60
           MPIR  L F+V   FL+  TFLSC SGG  S  VTLDSIVIYKTHEWLA+KPTVYF C G
Sbjct: 1   MPIRCTLKFRVLAFFLLFWTFLSCHSGGAESAVVTLDSIVIYKTHEWLAAKPTVYFHCLG 60

Query: 61  GNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120
           GNKT LPDVQKEHVLYSFNGEESWQPLTEF+SKKCKRCGFYEEDSIKSDDVFEEWEFCPS
Sbjct: 61  GNKTTLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120

Query: 121 DFTAPAGKYVRFNAKEFNATFLCLQCTAYSKVTSTISPLHD----GEKGMHSAVVIVISV 180
           DFT+PAGKYVRFN KEFNATFLCLQCTAYS VTST S        GEKGMH+AV+IVIS+
Sbjct: 121 DFTSPAGKYVRFNPKEFNATFLCLQCTAYSNVTSTSSSTSSSTDGGEKGMHAAVIIVISI 180

Query: 181 VASIVLIIGMVVGYKYWQKKRREQDQARFLRLFEDGDDIEDELGLSDVI 226
           VASIVLI+GMVVGYKYWQKKRR+QDQARFL+LFEDGDDIEDELGLSDVI
Sbjct: 181 VASIVLILGMVVGYKYWQKKRRQQDQARFLKLFEDGDDIEDELGLSDVI 229

[Close]

BLAST of CcUC04G066790 vs. ExPASy TrEMBL
Match: A0A6J1ICG3 (uncharacterized protein LOC111471262 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471262 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.4e-103
Identity = 186/225 (82.67%), Postives = 202/225 (89.78%), Query Frame = 0


Query: 1   MPIRRPLSFKVSTLFLIVSTFLSCQSGGVGSGFVTLDSIVIYKTHEWLASKPTVYFQCQG 60
           MPIRR  SF+V T+FL+VS  LSC S G  S  VTLDSIVIYKTHEWLASKPTVYF+CQG
Sbjct: 1   MPIRRSTSFEVLTVFLLVSVSLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQG 60

Query: 61  GNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120
           GNKTKLPDVQK HVLYSFNGEESWQPLTEF+SKKCKRCGFYEEDSIKSDDVFEEWE CPS
Sbjct: 61  GNKTKLPDVQKVHVLYSFNGEESWQPLTEFKSKKCKRCGFYEEDSIKSDDVFEEWELCPS 120

Query: 121 DFTAPAGKYVRFNAKEFNATFLCLQCTAYSKVTSTISPLHDGEKGMHSAVVIVISVVASI 180
           DFTAP G+YVR+N KEFNATFLCL+CTAYS VTS+ S  HD EKGMH+A +I+ISV+ S 
Sbjct: 121 DFTAPDGEYVRYNKKEFNATFLCLECTAYSNVTSSSSHSHDTEKGMHAAAIILISVIVST 180

Query: 181 VLIIGMVVGYKYWQKKRREQDQARFLRLFEDGDDIEDELGLSDVI 226
           VLIIGMV+GYKYWQKKRREQDQARFL+LFEDGDDIEDELGL+DVI
Sbjct: 181 VLIIGMVIGYKYWQKKRREQDQARFLKLFEDGDDIEDELGLNDVI 225

[Close]

BLAST of CcUC04G066790 vs. ExPASy TrEMBL
Match: A0A6J1HE82 (uncharacterized protein LOC111463378 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463378 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.5e-103
Identity = 185/225 (82.22%), Postives = 202/225 (89.78%), Query Frame = 0


Query: 1   MPIRRPLSFKVSTLFLIVSTFLSCQSGGVGSGFVTLDSIVIYKTHEWLASKPTVYFQCQG 60
           MPIR   SF+V T+FL+VS  LSC S G  S  VTLDSIVIYKTHEWLASKPTVYF+CQG
Sbjct: 1   MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQG 60

Query: 61  GNKTKLPDVQKEHVLYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPS 120
           GNKTKLPDVQKEHVLYSFNGEESWQPLTEF+SKKCKRCGFYEEDSIKSDDVFEEWE CPS
Sbjct: 61  GNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGFYEEDSIKSDDVFEEWELCPS 120

Query: 121 DFTAPAGKYVRFNAKEFNATFLCLQCTAYSKVTSTISPLHDGEKGMHSAVVIVISVVASI 180
           DFTAP G+YVR+N KEFNATFLCL+CTAYS VTS+ S  HD EKGMH+A +I+ISV+ S 
Sbjct: 121 DFTAPDGEYVRYNKKEFNATFLCLECTAYSNVTSSSSHSHDTEKGMHAAAIILISVIVST 180

Query: 181 VLIIGMVVGYKYWQKKRREQDQARFLRLFEDGDDIEDELGLSDVI 226
           VLI+GMV+GYKYWQKKRREQDQARFL+LFEDGDDIEDELGL+DVI
Sbjct: 181 VLIVGMVIGYKYWQKKRREQDQARFLKLFEDGDDIEDELGLNDVI 225

[Close]

BLAST of CcUC04G066790 vs. TAIR 10
Match: AT3G53490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G02720.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 243.4 bits (620), Expect = 1.7e-64
Identity = 119/213 (55.87%), Postives = 155/213 (72.77%), Query Frame = 0


Query: 15  FLIVSTFLSCQSGGVGSGFVTLDSIVIYKTHEWLASKPTVYFQCQGGNKTKLPDVQKEHV 74
           FL+   F S   G + +  VTLDS+ I+ TH+W ++KPTV+FQC+G NKT LPDV++ +V
Sbjct: 15  FLLCFIFFSSLPGTILTQEVTLDSVQIFTTHDWFSTKPTVFFQCKGENKTVLPDVKRTNV 74

Query: 75  LYSFNGEESWQPLTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPSDFTAPAGKYVRFNA 134
            YSFNGEESWQPLTE +  KCKRCG YE+D +K  D F+EWE CPSDFTA  G Y RF  
Sbjct: 75  SYSFNGEESWQPLTELQGTKCKRCGIYEDDPLKY-DTFDEWELCPSDFTA-EGSYKRFKE 134

Query: 135 KEFNATFLCLQCTAYSKVTSTISPLHDGEK--GMHSAVVIVISVVASIVLIIGMVVGYKY 194
           KEFNATFLC  C+     ++  S     E+  GMH  +V++I V+   V+ +G++VGYKY
Sbjct: 135 KEFNATFLCHGCSQVGAGSNKESGTEKEEQKGGMHPGIVVLIVVLLLGVVAVGLLVGYKY 194

Query: 195 WQKKRREQDQARFLRLFEDGDDIEDELGLSDVI 226
           W+KK+R+Q+QARFL+LFEDGDDIEDELGL + +
Sbjct: 195 WRKKKRQQEQARFLKLFEDGDDIEDELGLENTL 225

[Close]

BLAST of CcUC04G066790 vs. TAIR 10
Match: AT5G02720.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53490.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 122.9 bits (307), Expect = 3.4e-28
Identity = 57/139 (41.01%), Postives = 90/139 (64.75%), Query Frame = 0


Query: 87  LTEFESKKCKRCGFYEEDSIKSDDVFEEWEFCPSDFTAPAGKYVRFNAKEFNATFLCLQC 146
           +T    +KCKRCG YE+ S+ SD  F+ WE CP+DF+A +  Y+ F  KE NATF+C  C
Sbjct: 1   MTGIGGEKCKRCGIYEQGSLVSDKEFDVWEVCPTDFSA-SQVYMHFKEKEINATFVCHGC 60

Query: 147 TAYSKVTSTISPLHDGEKGMHSAVVIVISVVASIVLIIGMVVGYKYWQKKRREQDQARFL 206
             +    +  SP  +G  G+   + I+  V+ + ++++G V  +K+ Q+ ++++DQARF+
Sbjct: 61  AKFHSAVAASSPQEEGYNGLTFMIAIIAGVLCTTLVVVGGVFMFKHTQRMKKQRDQARFM 120

Query: 207 RLFEDGDDIEDELGLSDVI 226
           +LFE+ D+ EDELGL  VI
Sbjct: 121 QLFEESDEPEDELGLDPVI 138

[Close]

BLAST of CcUC04G066790 vs. TAIR 10
Match: AT1G57765.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09645.1); Has 68 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 1.1e-05
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 177 VASIVLIIGMVVG-----YKYWQKKRREQDQARFLRLFEDGDDIEDELGLSD 224
           V  I+L  G V G     YK WQKK+R++  AR L+LFE+ D++E ELGL D
Sbjct: 56  VIFILLGFGAVAGLSFFLYKLWQKKKRDEQYARLLKLFEEDDELEVELGLRD 107

[Close]

BLAST of CcUC04G066790 vs. TAIR 10
Match: AT1G57765.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09645.1). )

HSP 1 Score: 48.1 bits (113), Expect = 1.1e-05
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 177 VASIVLIIGMVVG-----YKYWQKKRREQDQARFLRLFEDGDDIEDELGLSD 224
           V  I+L  G V G     YK WQKK+R++  AR L+LFE+ D++E ELGL D
Sbjct: 66  VIFILLGFGAVAGLSFFLYKLWQKKKRDEQYARLLKLFEEDDELEVELGLRD 117

[Close]

BLAST of CcUC04G066790 vs. TAIR 10
Match: AT1G09645.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G57765.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 5.2e-05
Identity = 21/52 (40.38%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 172 IVISVVASIVLIIGMVVGYKYWQKKRREQDQARFLRLFEDGDDIEDELGLSD 224
           +++ +V  + + +     YK WQKK+R++  AR L+LFE+ D++E ELGL D
Sbjct: 55  VILVLVGFVAVAMFSFFLYKLWQKKKRDEQYARLLKLFEEDDELEVELGLRD 106

The following BLAST results are available for this feature:

BLAST of CcUC04G066790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883476.1	2.1e-112	89.33	uncharacterized protein LOC120074430 isoform X1 [Benincasa hispida]	[more]
XP_022143802.1	9.9e-107	83.56	uncharacterized protein LOC111013628 [Momordica charantia]	[more]
XP_004142096.1	1.9e-105	83.84	uncharacterized protein LOC101220441 [Cucumis sativus] >KGN54203.1 hypothetical ...	[more]
XP_008447337.1	2.1e-104	83.41	PREDICTED: uncharacterized protein LOC103489806 [Cucumis melo]	[more]
XP_023518189.1	1.0e-103	83.11	uncharacterized protein LOC111781731 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC04G066790 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC04G066790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRX4	4.8e-107	83.56	uncharacterized protein LOC111013628 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A0A0KXD0	9.1e-106	83.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293130 PE=4 SV=1	[more]
A0A1S3BH72	1.0e-104	83.41	uncharacterized protein LOC103489806 OS=Cucumis melo OX=3656 GN=LOC103489806 PE=...	[more]
A0A6J1ICG3	1.4e-103	82.67	uncharacterized protein LOC111471262 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HE82	2.5e-103	82.22	uncharacterized protein LOC111463378 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CcUC04G066790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53490.1	1.7e-64	55.87	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G02720.1	3.4e-28	41.01	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G57765.1	1.1e-05	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G57765.2	1.1e-05	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G09645.1	5.2e-05	40.38	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33780	EXPRESSED PROTEIN	coord: 11..225
None	No IPR available	PANTHER	PTHR33780:SF3	EXPRESSED PROTEIN	coord: 11..225
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..24 score: 6.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G066790.1	CcUC04G066790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane