CcUC04G064950 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTCGCCTTGGCCGGTGGTCGGCCGCCGTGACGGCTCTGTGTGGTGTGTTGCTGTTGTCGGCACCGCCGCCGTCGGCGTCTGAAAAAGTGACCGTGTCAGTGTATTACGAAGCTCTCTGCCCTTTCTGTGCGAACTTCGTGGTTTACCATTTGGTGAAGCTTTTTGAAAATGGACTGATCTCCGCCGTCAATCTCCGGATGATCCCTTGGGGCAACGCCTGGATCCAGCCCGACGGCGCCTTCTTTTGCCAGGTAAGCTTCTCAAATCCCCCACGTTTTTTTACTTTGTTATTTTTCTTTTTAAAAAAAATCTATATTTTCAATTCTCAATCAAATACCACCAACCAAAATAAATTTTAAAGATTACTGTCTATAATTACTTAGTTTTTGAAAATTAAGTATACAAATATTATTTATATTTATTAATTTTATAAAAATTTAAAAATTAAGGGAAAGTAATCTTTCAAAACTTATTTTTTATCATTTTGAAAGAGTAAATTGTGAGAAAATAATCATAATTTTTTAAGAAAAAATACAAAATAATCATCTACTTTTAATTTTTAAAATATAACTTGATTTCTTAAAACAATAGTGTTAAGTACATAAATTAATAGGTAGTAGTTGTATTTATACTCTTAATTTTTAAAAACTAAAGATCAAATGAGACTTAAACTATTGAAATGTTAAAATCTATAGGACTTGTATGGTTAAAGTTTACGAGTATTTTGCACTTTTTCTATTGACTATCCATTGCTATTATGATTGTTTTTTCTTTTGAGCAAGGGACCATGACATATAAATCAAAAATACATATGCTAATTGAGTTATGTTCATGATAATTGTTATTATAATTTAGTACCCGTGGCATTTTAGATATTTTAGATAAAATAAATGATAATTTTCAAGGTTAAATTACAAGGTTTTGTGTTTATATAGTCAACTTAAAAAAAAAAAAGAAAAATAAATCATAAGTATTTGAACTTTTAATTTATTGTATAATAAATTTCTAAAATTTTAAAGGTGTTTAGGGACCTATTAAAAATGTTGAAATTTATTCGACAAAAACTTGAACATTTACCAACTTAATCAAAAGTTTAAAATTTTATCAAATATAAAATTTAATTTTATATCTAATAAATTAGTTAATTTTTTAAAAAAAAATTATTTCTATTAAATAAATAAAAACTTGAGTGTGGTTTGAAGTGCATCTCTATCTTTATTGCTAATCGGTTTGAATGAAAGGTTTTGAAAACTCATAACAGAAAAGTTAATTTACCCCATAAACCAATTAATGGTGAAAATTATTGTTTGAAAATAGTCGGTGGGGCATTTAATATTGCTACTCCCCAGAACTGCACTCATGCTGGTACTCCCATACCCATACTCCATTATAATTATGATTATTAATGCCCTTGTCTCTTACTTTACTAAATTAAATTCATTATTCAAAACAACTTTTTCTAACTAATCTTTAATAATTCCATTCTAATTTATTATTCTATGTCAAATTACGTAACTAAATCGATTAAATTATGTATATAAAAAGTTTAGATCTTTCCATTGATATTAAAAAAAAAAAAAGAAAAAAAAAACTAAATATATTATTGTTTGTGTGCAGCATGGACCAGATGAATGCATGTTGAACACCGTTGAAGCTTGCACGATTTCAATTTATCTCAATACAGTAAAATTCTTTTACCTACAATAAGGGGAGAGATTCAAATAACAAACCTCTTAATTGTTACTAACACATTTATATTTTCATATCACAAATCTCTTGATTGTTACTAACACATTTATATTTATATTTATATGTTATATAACGTTAAGTTAAACTCTTTTACTATTATAAATATTCACATGTATTTTTTTTAATATGCATCTAAAATCTTGCAAATATAACTTTCTTTAAGAATCTAGAATTTATATTACTTAATTAAGAAAATATATCTTCAGAGCGAATATTGTTCAACAATAATTGATTTGCCCTTTCATTGAAGTTGGAAGTACATATCCTTATATTCCACATGTTATAATAAACAAGCATTAAAAAATTAAAAGAAAATTATTATGGATGTTTCCAAGTTTCATAAATTGAAATCTTTTGATTGTTAATGGATACTTGGCAAGATGGATAAATCTGCCATTTTGTTTTGGTCTGTGAAGGAAAAACATTTCAGATTCATCCATTGTGTTGAGGGATTGACAGTGCAAAACAGACACAATGAATGGACAAAGTGTTTTGACATTGCCAAGTTGAGTGCTATACCAATAGATTGCTACAGAAATGGGCAGGGGAAAGTGGTAACATTGCTTTCTTATCATCTTCTCTCTCTGTTTCTTTCCTTTTTTTTCTTGGTTGAACCCTGAGTAAAGCCAATGAAATGCAGCTTGAACAAAACTATGCTTCAGAAACTACTCACCTCAATCCGCCTCATCGATTTGTTCCATGGGTCATTGTTGATAATCACCCTCTCCAGGAGGTCAGTCAGCTTCAATTTGAGCTAGTTTTATCCTTGTTCTTTGCCATGTGATTCTTTGAAATGAAGCTGTTTTCTTTTGTCTGAATCAGGACTACCAAAACTTCATGGCCTACATTTGCAAAGCTTACAAAGGCAGTGCTGCACCAGAAGCTTGCAAGTCTATACAACTCAATGACCGCCAATACCTGGAAAATGCCAATGGAGGAAGTCAAGTCTGTTATGCAACTACAACGAGAAACTCAACATTTTAA ATGAGTCGCCTTGGCCGGTGGTCGGCCGCCGTGACGGCTCTGTGTGGTGTGTTGCTGTTGTCGGCACCGCCGCCGTCGGCGTCTGAAAAAGTGACCGTGTCAGTGTATTACGAAGCTCTCTGCCCTTTCTGTGCGAACTTCGTGGTTTACCATTTGGTGAAGCTTTTTGAAAATGGACTGATCTCCGCCGTCAATCTCCGGATGATCCCTTGGGGCAACGCCTGGATCCAGCCCGACGGCGCCTTCTTTTGCCAGCATGGACCAGATGAATGCATGTTGAACACCGTTGAAGCTTGCACGATTTCAATTTATCTCAATACAGAAAAACATTTCAGATTCATCCATTGTGTTGAGGGATTGACAGTGCAAAACAGACACAATGAATGGACAAAGTGTTTTGACATTGCCAAGTTGAGTGCTATACCAATAGATTGCTACAGAAATGGGCAGGGGAAAGTGCTTGAACAAAACTATGCTTCAGAAACTACTCACCTCAATCCGCCTCATCGATTTGTTCCATGGGTCATTGTTGATAATCACCCTCTCCAGGAGGACTACCAAAACTTCATGGCCTACATTTGCAAAGCTTACAAAGGCAGTGCTGCACCAGAAGCTTGCAAGTCTATACAACTCAATGACCGCCAATACCTGGAAAATGCCAATGGAGGAAGTCAAGTCTGTTATGCAACTACAACGAGAAACTCAACATTTTAA ATGAGTCGCCTTGGCCGGTGGTCGGCCGCCGTGACGGCTCTGTGTGGTGTGTTGCTGTTGTCGGCACCGCCGCCGTCGGCGTCTGAAAAAGTGACCGTGTCAGTGTATTACGAAGCTCTCTGCCCTTTCTGTGCGAACTTCGTGGTTTACCATTTGGTGAAGCTTTTTGAAAATGGACTGATCTCCGCCGTCAATCTCCGGATGATCCCTTGGGGCAACGCCTGGATCCAGCCCGACGGCGCCTTCTTTTGCCAGCATGGACCAGATGAATGCATGTTGAACACCGTTGAAGCTTGCACGATTTCAATTTATCTCAATACAGAAAAACATTTCAGATTCATCCATTGTGTTGAGGGATTGACAGTGCAAAACAGACACAATGAATGGACAAAGTGTTTTGACATTGCCAAGTTGAGTGCTATACCAATAGATTGCTACAGAAATGGGCAGGGGAAAGTGCTTGAACAAAACTATGCTTCAGAAACTACTCACCTCAATCCGCCTCATCGATTTGTTCCATGGGTCATTGTTGATAATCACCCTCTCCAGGAGGACTACCAAAACTTCATGGCCTACATTTGCAAAGCTTACAAAGGCAGTGCTGCACCAGAAGCTTGCAAGTCTATACAACTCAATGACCGCCAATACCTGGAAAATGCCAATGGAGGAAGTCAAGTCTGTTATGCAACTACAACGAGAAACTCAACATTTTAA MSRLGRWSAAVTALCGVLLLSAPPPSASEKVTVSVYYEALCPFCANFVVYHLVKLFENGLISAVNLRMIPWGNAWIQPDGAFFCQHGPDECMLNTVEACTISIYLNTEKHFRFIHCVEGLTVQNRHNEWTKCFDIAKLSAIPIDCYRNGQGKVLEQNYASETTHLNPPHRFVPWVIVDNHPLQEDYQNFMAYICKAYKGSAAPEACKSIQLNDRQYLENANGGSQVCYATTTRNSTF Homology
BLAST of CcUC04G064950 vs. NCBI nr
Match: XP_038883768.1 (gamma-interferon-responsive lysosomal thiol protein isoform X1 [Benincasa hispida]) HSP 1 Score: 468.8 bits (1205), Expect = 2.8e-128 Identity = 216/237 (91.14%), Postives = 228/237 (96.20%), Query Frame = 0
BLAST of CcUC04G064950 vs. NCBI nr
Match: TYK10933.1 (gamma-interferon-inducible lysosomal thiol reductase [Cucumis melo var. makuwa]) HSP 1 Score: 456.4 bits (1173), Expect = 1.5e-124 Identity = 210/230 (91.30%), Postives = 219/230 (95.22%), Query Frame = 0
BLAST of CcUC04G064950 vs. NCBI nr
Match: XP_008464223.1 (PREDICTED: gamma-interferon-inducible lysosomal thiol reductase [Cucumis melo] >KAA0037728.1 gamma-interferon-inducible lysosomal thiol reductase [Cucumis melo var. makuwa]) HSP 1 Score: 456.1 bits (1172), Expect = 1.9e-124 Identity = 210/230 (91.30%), Postives = 218/230 (94.78%), Query Frame = 0
BLAST of CcUC04G064950 vs. NCBI nr
Match: XP_004148608.1 (gamma-interferon-responsive lysosomal thiol protein [Cucumis sativus] >KGN54401.1 hypothetical protein Csa_018063 [Cucumis sativus]) HSP 1 Score: 451.1 bits (1159), Expect = 6.1e-123 Identity = 205/233 (87.98%), Postives = 219/233 (93.99%), Query Frame = 0
BLAST of CcUC04G064950 vs. NCBI nr
Match: XP_022966573.1 (gamma-interferon-inducible lysosomal thiol reductase isoform X2 [Cucurbita maxima]) HSP 1 Score: 425.6 bits (1093), Expect = 2.7e-115 Identity = 196/237 (82.70%), Postives = 214/237 (90.30%), Query Frame = 0
BLAST of CcUC04G064950 vs. ExPASy Swiss-Prot
Match: Q9SV73 (Gamma-interferon-responsive lysosomal thiol protein OS=Arabidopsis thaliana OX=3702 GN=GILT PE=2 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.8e-32 Identity = 68/185 (36.76%), Postives = 102/185 (55.14%), Query Frame = 0
BLAST of CcUC04G064950 vs. ExPASy Swiss-Prot
Match: Q9ESY9 (Gamma-interferon-inducible lysosomal thiol reductase OS=Mus musculus OX=10090 GN=Ifi30 PE=1 SV=3) HSP 1 Score: 111.3 bits (277), Expect = 1.5e-23 Identity = 75/234 (32.05%), Postives = 112/234 (47.86%), Query Frame = 0
BLAST of CcUC04G064950 vs. ExPASy Swiss-Prot
Match: Q499T2 (Gamma-interferon-inducible lysosomal thiol reductase OS=Rattus norvegicus OX=10116 GN=Ifi30 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.5e-23 Identity = 71/216 (32.87%), Postives = 108/216 (50.00%), Query Frame = 0
BLAST of CcUC04G064950 vs. ExPASy Swiss-Prot
Match: A6QPN6 (Gamma-interferon-inducible lysosomal thiol reductase OS=Bos taurus OX=9913 GN=IFI30 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.8e-21 Identity = 71/216 (32.87%), Postives = 106/216 (49.07%), Query Frame = 0
BLAST of CcUC04G064950 vs. ExPASy Swiss-Prot
Match: P13284 (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens OX=9606 GN=IFI30 PE=1 SV=3) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20 Identity = 68/202 (33.66%), Postives = 97/202 (48.02%), Query Frame = 0
BLAST of CcUC04G064950 vs. ExPASy TrEMBL
Match: A0A5D3CGA6 (Gamma-interferon-inducible lysosomal thiol reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00130 PE=3 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 7.0e-125 Identity = 210/230 (91.30%), Postives = 219/230 (95.22%), Query Frame = 0
BLAST of CcUC04G064950 vs. ExPASy TrEMBL
Match: A0A5A7T4J7 (Gamma-interferon-inducible lysosomal thiol reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00210 PE=3 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 9.2e-125 Identity = 210/230 (91.30%), Postives = 218/230 (94.78%), Query Frame = 0
BLAST of CcUC04G064950 vs. ExPASy TrEMBL
Match: A0A1S3CLF7 (gamma-interferon-inducible lysosomal thiol reductase OS=Cucumis melo OX=3656 GN=LOC103502154 PE=3 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 9.2e-125 Identity = 210/230 (91.30%), Postives = 218/230 (94.78%), Query Frame = 0
BLAST of CcUC04G064950 vs. ExPASy TrEMBL
Match: A0A0A0L2Q2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312830 PE=3 SV=1) HSP 1 Score: 451.1 bits (1159), Expect = 3.0e-123 Identity = 205/233 (87.98%), Postives = 219/233 (93.99%), Query Frame = 0
BLAST of CcUC04G064950 vs. ExPASy TrEMBL
Match: A0A6J1HSI5 (gamma-interferon-inducible lysosomal thiol reductase isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466215 PE=3 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 1.3e-115 Identity = 196/237 (82.70%), Postives = 214/237 (90.30%), Query Frame = 0
BLAST of CcUC04G064950 vs. TAIR 10
Match: AT5G01580.1 (gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 245.4 bits (625), Expect = 4.7e-65 Identity = 105/210 (50.00%), Postives = 143/210 (68.10%), Query Frame = 0
BLAST of CcUC04G064950 vs. TAIR 10
Match: AT1G07080.1 (Thioredoxin superfamily protein ) HSP 1 Score: 217.2 bits (552), Expect = 1.4e-56 Identity = 93/184 (50.54%), Postives = 130/184 (70.65%), Query Frame = 0
BLAST of CcUC04G064950 vs. TAIR 10
Match: AT4G12900.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 167.9 bits (424), Expect = 9.6e-42 Identity = 79/188 (42.02%), Postives = 111/188 (59.04%), Query Frame = 0
BLAST of CcUC04G064950 vs. TAIR 10
Match: AT4G12890.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 165.2 bits (417), Expect = 6.2e-41 Identity = 75/188 (39.89%), Postives = 110/188 (58.51%), Query Frame = 0
BLAST of CcUC04G064950 vs. TAIR 10
Match: AT4G12870.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 148.3 bits (373), Expect = 7.9e-36 Identity = 70/189 (37.04%), Postives = 109/189 (57.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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