CcUC04G063860 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G063860
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	binding partner of ACD11 1-like
Location	CicolChr04: 20168304 .. 20174638 (+)
RNA-Seq Expression	CcUC04G063860
Synteny	CcUC04G063860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTATCAATAGAGTTTAGATAAAAATGACTTTTTAGAAAAATAATTTTTTCTCTATTCAATTCAAATAGATCCTAAAATTGAACATTTGAAAGTATAAGGACCAAAATCGAATAAACTCAAAAGTATAGAGACCAAAATGATATTTTAACATTTGTTTATAACTTTTTTTAAAAAATATTCATTTACATCTGCATTTTATCCACGACGTTTTCCTCGCCACATTAAGAAAAAAAAATAATAATGAAAATGAAAATGAAAGGGGGCAAATTTGGAAAGTGAAATTTCCTGACATACTAATTTCCTTGATTTTTATCTGTCTCACGCTTTGTCTGGCGATACTTCTTTCAAATTGCCTCCAAGCTCCAACTTGTACAACTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCAAGAAATTCGCCAAATTCTTCGATAATTAGCAATGCAGGTAACAAATCCTTCAATTTCCACTACTTCGTTTCAACTTGTACTCTCTGATTTCCGCAATCAACTTCAATTTTGCCCTTGTTTTTTATCTTGATTTCTTCTGCTCAGTCTCAGACTCGGACGGTTCAAGTTAAGCACGTTTCGGATCTAGCTACTAAGAGGGTGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGCACATAGAGATTCAATGGTGAGTGATTAACTCTGTGTTACTGTGAACAGAATTGCAAAAAGTGGTAAAGAGAAGATGTTCATGATTGATTGATTATGATTCCCTTTTCTATGCGGCTTGTTTAGTTTTAGGTTTCCTACTGTTTGGCTTCCGAGCAAATGTAACTATTAAGCATGAGGGTTGTAATTGTTATAGCTGACAAGTAATTAAGGAATCCTGGTTGAGTTTTAGCAAAAATATTAGGAGTGCAGATGTTCTATTGGAGAAATTGCTCCAAGCACTATAAAAGAGTCTTTGCCTCTAGTTTCAAATCAAAACACTTTAAGCTTGAGTGAGCTAACTCTAGTTAAATTTTCTTTTGTATTATCTAGTTTAAGAGTGAACTTAAAGGGTGTGAGTAGTATAAAAGTTTCGAGAGAGTGCTCATATAATTGGGATCGGGGACAGAGTTGTTTTGTGATTGTAATAAATTTTCACATGGTGGATTTCTTTCTAGAGGGATGTAGTTTTTTTCTCCGGTTTAGAGTTTTCCATGCTAATTCTTGTGTTCCTGGTTTTATTGATTTCTTTTAATTTCTTTATTATTTCACTGCTTATTTCTGCGGTGACAGTGAGAGGTTTTTCCCAACATTCCTCTTGAGAAGATAAGAAGGGTCTGATGGATTGCAATTGATTATTATCTTTACCTTACCATTGGCATGCAGTGTAGAATAAGCAATTGCTGGATTGTTATTCTAATTTTTTATTGTTGGTGCAGTGAACAAGGGGGATCCAAGACTGCATTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGTATTTGATTATCTCAATTCTCTTTCATATCCATGAAGTCTTAGTCAGTTATCGTGATGTATTTGTTGAACTTGTGATTTTACAATGAATGTCCAAGAGCGTCATGTCGAAGTTTGGTTCACGTGGGTCTAAATTTGGCTGTGTTTACCTTCTTATCTAGGCTATGTTGGTTCTTAGTGTCCAGTTAGTTCTATATCCTCTCTACTTTTCTTTCCTTTATTTTCTTGTAATTAATCTTGATTGAATTGAAAGTGATGGATGAGTAGAATCTCGGTTTTTTTTTTTCTTTTCTTCTTCTTAATGAAAATACATTTTTTCGAAAGAAGATTTTCTACTCATAACCTCAAACATAACAAGAGAAACTTCTTTATAGCCATAATGTACGATCTTTTAGTAGAAGCTACCCTGTTTTTCCATTCTGTCTTTCTGATCACCACACTACTCTTTCTAATGATAATATAAACCAGAGATAAGTTGTAAACTAGTTTTAAAAGCGGCATGCTTTTTTTTTCTAGTTTTCCTAACATTAATTATGAGTCCATACTTTTGGAGCGAAAAACAACTCAAGGAAAGCAAGGATAGAAAGAGAAAAAAAGAAAAAAGAAGAAAAAGGATAGGAGAGTAATGGTTGAACTTGAAAGTGAAACTATTAAACTGAACTTTATTTAACAAAACAATGCCTCTCTTTTCCTTTTTGTTAGGAATAAAAGCATTAGTGAGAAGTAGTACTAAATAGACATGTTTCTAGAAAAAGAAGTAAGCTAATACCTTTCCTTTGCAGGATCATTTCTCTACGCAATAATGGAATTATTTGATCTTTTCATCACACAATACTGGAAATATACTTTTTCTTCTTCATATTTGGCTGATGCCATAAGCTACTATAAACATTTTCTATTATTTATTTATTTGTTATTTAGGGAGCAACAATTGTAGATCAGATTGTGAGCATATCTCCCGCTGAAAATCATGTACCAAGAAAAGAAATGCAGGTACTATTCTTATGTTTGAATATGTTTTGAGGCCGGTATTTCAATATTTTTAATTTACTATGTTTGCAGGAAGTACGGGCTGTGGACAATGCTGCATGTCTCACTCCTACAGAGAATAATTTTCCTTGTATTGAGGTAAATGTGTTGACTCCACTCTATGAATATGAAGTATTTGAGTAGCAGTTGTTTCTATCTTTGATGTACTATTAATGAAAAACCAAGGCTGGGGAGTTTCATCAGATTGAAAAGTTTAGGTTATGTTTCTTGTTTTCTGTCTTTAGATTTTCTTAAATTGATGTAGCTGGATGAAAAGTAAAACCTACATTTAATGCATATCGTCATAAACCTCACTGAAAACCTCCCACTACTATCGCATAAATGAGCAGATAAATAACTGAGAAATTAAAAGAAAGCAATCAAACTGGGAATATAAAAATTAACATGAAAAAATTCCAAACCGAAGAAAACACCACGGATCGAAAAATTCCACTATGTGAAAAATTATTACAATCACACAAAATAATTCTCCCGAACCCCAATTACCAGAGCACTCTCTCAAAGCATTATACCACTCACACAACTGAGTCAACTAGTATACCAAGCTTAAAATGCTTTTAAAGGCATATGCTCCTTTTATAGTGCTTGGAGCCCATCACTTTCTTCAATCTTTTAGATGTGGGACAACTGCACTTCTAATATTTTGCCAAAACTCAACACTCACCACACTTACTGAAACCATGATGAATAACTGGTGAAATAACAGTTTCACACTTCAGTTTTCATGTAGATCTCGATTTCCCGTCTTTATTTAACTATACGAGTGGATGGTGAGGCATCCTTTCTTTGTTCCCACCTTAAATCTTTTTGTGTTACAGGATTTTGCAAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACTGTGCTTGCTAAAGGTTCAACAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTCGACGAAAAACATCGGTTAACTGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAAAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGATGTCAGTGGTTAACGAGAAAGTCAAGTCTATCGATCAAAATCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGATCTGCTGTCAAAACAAGCAAGTATGAATCGTCATTCTTAAGCAACTTTTACTTCCCTTCCTCCTGCTATCTTCAAATTTTAGAACTTAAATATTCTCCACTCCTAGCAAAAAAGCAAAAAATTAGGGGCGCTGAGTTGGTTATTATAGCATGTGAGTTATAATAGTTTATGTTTGGGACGTAGACTATTTTAGTCTAGGTAATAATATTTTGTGTTTAAGGTGCAGACTATTTTAGTCTGAGTAAGAAATAGTAAACACTGTAATAGAGAGGGAAAGAGGATGAGTAGGAGATAGTAAACACTATAACAAAGAGAGATTTGAAATAGTATTACTGTAGTTAATTGTAGGTTATACATGTTGGACATACCAACTATATATTATAATTGGAGCCCAAATATGGAGTGGGTTAATATAACCCACCCCAACCATATGAAGTTGGGGGCAGAAACAACCTTTCAGGGGGGTGTTTGGGACACTGAGTTGGTTACTATAGTCAATGACTATTATAGTTTGTGGGTTATGATAGTCTGTAGATCATAATAGTTTGTGGTTGGAGTGCAAACTATTTTAGTTTGGATAACAATAGTCTATGTTTAGGGTGCAGGCTATTTTAGTATGGGTAAGGAATAATAAACATTATAACAAAGAGGGAGAGAAGGATGAGTAGGAAATGGTAAATACTGTAACAAAGAGGGATTTGAAATAGTAAGCCTGTAGTTAATTGTAGGTTATAATGGTTGGACAACATGTATGACTCATTCTTGATGTTTATAGTGCATGATTGAGGTTCCTCCGTTTATATCACACCAACTATTATTATTGGAGCCTAAACATGGAGTGGGCTATAATAGGCCACTCCACCCACTCGAAGTTGGGGGCTCAAACAACCACTTAATTTTCTTGAATAGCTCCCAAACAACTCCCTAGTGTTTCAACTTCTTGAGAACTTTAGATCGATGTAGTTGTATATTTCTGTTGTCCAAATAAATTAGAATGGTTCTACTATTCATTTTGAATAAAAGCAGTTATGACAATAGACGGAAGTGAATTAATTGTTTCACTCTATCTTGCATTGAACAGGTATGTGACAGCAGGTACTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGAGAAGTTCCATTTGGCTATCTCAGGCTTAACTTCAAAGGTGCGTTTATGAAACCCTTTTCTATGGCGACATAAAAGTCAGGATTCTTCCGAAAATTGCTTTGCTGTGAGTAACTAAAACAACTTTTGTCATGTTCAAAATCACTCCGAAACACATCTTTAATCACTCAAAATCAATTCAATGCTTAATCTTACACTTTAAATGCAATTTTCATAATATTAAAATTGATTTTGAACGATTAAAAGCAATTCTAGAGTGATTTAAAAATGACCAAAGTGGTTTTAACAATTTTAGAATCTCTTCCAAACATATTATAGGAACAATTTTAGGAACTACAGTTTTTGTAAATTAGTTACTCAAATCTATTTTTCTAGTTTTTTGTTTTATGGATTAGCCAATACCATGCCCAAAAATGAATTTTTGCCAAAAGAACCTAGGCTGTTGGGAGCCTATAAGAAAAACACAAGTAATTTTTTGAGAATGAAAAAACACAAGTAATCAATACCAAGAAGTACAATTTAAAATCAACATTTTGATGAGAGATTAAGCAAAATCCGAAAAGTTCCCAAAAGAGAGAAATCTCTCTAAAACCTCGTTTCACTCGTGTCTAAAAGCTTCTTCCAAACAACAAAGTTTGGCTACCTGTTTGGATTGGTTGTTTAAGTACTTAAAATGTATTTGTAAGTGCGAAAAAAATAAGTAATTTGAAAGTCAATTCAAATAGATTTTCAAAGACTTACAAAATTAAAAAACAGGAAAAATAGCCGATGAAAAAAGTAACTAACTAAGATCTCATTTGGTAACGACTTTGTTTTCCGTTTTTAAAATTTAGGTTTGTTTCTTCACAATTTTTCTATTATTATTTTTACCTATCTCAAAGAAACACTCTAACATCATCAAATTCTAAAAATGAAAACTGCTTATGAAAATTACTTTTTAATTTTCAAGACTAGCTTGTTTTTTTAAAACACAACTAGAAAGTGCTAACAAAGCATAGGAACTTAGGAGTGGTAGTGATGTTTATTGTTTATAGAATTCATTTTAAAAAATCAAATGGTCATCAAACGGAGCACAAAACGAACAATTAACAAAATTAATCTTTGCAATCCTGGAATTTACCCTCTACACCAAACATGCAGGAACCCCCAGTTGTTGCCTAACCTTAAAACTTAGGCTTCAAGAAAGTCACTTGCCTTGGCTACTTGTATTTTCAGTGGGGGATTGAAATGAGTTTCTTCAATTCTATTTCTTCAGGTTATTTCTTTTTCTTGAGGACGGTGCTCTATTATTATTATTTATTATTATTATTAGTATCATTTTTTATATTGTTCATATTCTTTAATTACAAGGGGGTTTGGCTGATGTCAATTATGTATTTGTAAGATTGGTTATGGAAGTGTAAAGAAAATCCAATTATGGTTTGTCTTATACTCTTAATTATTTTTTTAGGAGTATATCAAAGTTTGTGGCTCAGCTTGCTTCTTGCTGTCA

mRNA sequence

TTTCTATCAATAGAGTTTAGATAAAAATGACTTTTTAGAAAAATAATTTTTTCTCTATTCAATTCAAATAGATCCTAAAATTGAACATTTGAAAGTATAAGGACCAAAATCGAATAAACTCAAAAGTATAGAGACCAAAATGATATTTTAACATTTGTTTATAACTTTTTTTAAAAAATATTCATTTACATCTGCATTTTATCCACGACGTTTTCCTCGCCACATTAAGAAAAAAAAATAATAATGAAAATGAAAATGAAAGGGGGCAAATTTGGAAAGTGAAATTTCCTGACATACTAATTTCCTTGATTTTTATCTGTCTCACGCTTTGTCTGGCGATACTTCTTTCAAATTGCCTCCAAGCTCCAACTTGTACAACTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCAAGAAATTCGCCAAATTCTTCGATAATTAGCAATGCAGTCTCAGACTCGGACGGTTCAAGTTAAGCACGTTTCGGATCTAGCTACTAAGAGGGTGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGCACATAGAGATTCAATGTGAACAAGGGGGATCCAAGACTGCATTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTAGATCAGATTGTGAGCATATCTCCCGCTGAAAATCATGTACCAAGAAAAGAAATGCAGGAAGTACGGGCTGTGGACAATGCTGCATGTCTCACTCCTACAGAGAATAATTTTCCTTGTATTGAGGATTTTGCAAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACTGTGCTTGCTAAAGGTTCAACAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTCGACGAAAAACATCGGTTAACTGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAAAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGATGTCAGTGGTTAACGAGAAAGTCAAGTCTATCGATCAAAATCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGATCTGCTGTCAAAACAAGCAAGTATGTGACAGCAGGTACTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGAGAAGTTCCATTTGGCTATCTCAGGCTTAACTTCAAAGGAACCCCCAGTTGTTGCCTAACCTTAAAACTTAGGCTTCAAGAAAGTCACTTGCCTTGGCTACTTGTATTTTCAGTGGGGGATTGAAATGAGTTTCTTCAATTCTATTTCTTCAGGTTATTTCTTTTTCTTGAGGACGGTGCTCTATTATTATTATTTATTATTATTATTAGTATCATTTTTTATATTGTTCATATTCTTTAATTACAAGGGGGTTTGGCTGATGTCAATTATGTATTTGTAAGATTGGTTATGGAAGTGTAAAGAAAATCCAATTATGGTTTGTCTTATACTCTTAATTATTTTTTTAGGAGTATATCAAAGTTTGTGGCTCAGCTTGCTTCTTGCTGTCA

Coding sequence (CDS)

ATGCAGTCTCAGACTCGGACGGTTCAAGTTAAGCACGTTTCGGATCTAGCTACTAAGAGGGTGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGCACATAGAGATTCAATGTGAACAAGGGGGATCCAAGACTGCATTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTAGATCAGATTGTGAGCATATCTCCCGCTGAAAATCATGTACCAAGAAAAGAAATGCAGGAAGTACGGGCTGTGGACAATGCTGCATGTCTCACTCCTACAGAGAATAATTTTCCTTGTATTGAGGATTTTGCAAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACTGTGCTTGCTAAAGGTTCAACAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTCGACGAAAAACATCGGTTAACTGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAAAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGATGTCAGTGGTTAACGAGAAAGTCAAGTCTATCGATCAAAATCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGATCTGCTGTCAAAACAAGCAAGTATGTGACAGCAGGTACTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGAGAAGTTCCATTTGGCTATCTCAGGCTTAACTTCAAAGGAACCCCCAGTTGTTGCCTAA

Protein sequence

MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA

Homology

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BLAST of CcUC04G063860 vs. NCBI nr
Match: XP_038881171.1 (binding partner of ACD11 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 476.9 bits (1226), Expect = 1.2e-130
Identity = 251/271 (92.62%), Postives = 258/271 (95.20%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLAT+R IHEFFSFSGEIEHIEIQCEQG SKTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGK 120
           LLLSGATIVDQIVSIS AENHVPR+EMQEVR VDNAACLTPTENNFP  ED ASQPSSGK
Sbjct: 61  LLLSGATIVDQIVSISLAENHVPRREMQEVRVVDNAACLTPTENNFPSTEDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQ VVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTV
Sbjct: 121 MYVNRAQVVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAG AWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAISGLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLA+S LTSKE  VVA
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLTSKESSVVA 271

[Close]

BLAST of CcUC04G063860 vs. NCBI nr
Match: XP_004151849.1 (binding partner of ACD11 1 [Cucumis sativus])

HSP 1 Score: 474.9 bits (1221), Expect = 4.5e-130
Identity = 248/271 (91.51%), Postives = 257/271 (94.83%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLAT+R IHEFFSFSGEIEHIEIQCEQG SKTAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPR+EMQEVR  DNAACLTPTENN P IED ASQPSSGK
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQ LHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAISGLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLA+S L SKEPPVVA
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of CcUC04G063860 vs. NCBI nr
Match: KAE8652335.1 (hypothetical protein Csa_022102 [Cucumis sativus])

HSP 1 Score: 473.8 bits (1218), Expect = 1.0e-129
Identity = 247/271 (91.14%), Postives = 257/271 (94.83%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIA 60
           +QSQTRTVQVKHVSDLAT+R IHEFFSFSGEIEHIEIQCEQG SKTAFVTF DPKALEIA
Sbjct: 147 LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 206

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPR+EMQEVR  DNAACLTPTENN P IED ASQPSSGK
Sbjct: 207 LLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGK 266

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTV
Sbjct: 267 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 326

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQ LHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKV
Sbjct: 327 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 386

Query: 241 AKAGQAAGTKTREKFHLAISGLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLA+S L SKEPPVVA
Sbjct: 387 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 417

[Close]

BLAST of CcUC04G063860 vs. NCBI nr
Match: XP_008462804.1 (PREDICTED: binding partner of ACD11 1-like [Cucumis melo] >KAA0066322.1 binding partner of ACD11 1-like [Cucumis melo var. makuwa] >TYK00958.1 binding partner of ACD11 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 470.7 bits (1210), Expect = 8.5e-129
Identity = 246/271 (90.77%), Postives = 256/271 (94.46%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLAT+R IHEFFSFSGEIEHIEIQCEQG SKTAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPR+E+QEVR  DNAACLTPTENN P  ED ASQPSSGK
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREIQEVRVADNAACLTPTENNSPSREDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQ LHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAISGLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLA+S L SKEPPVVA
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of CcUC04G063860 vs. NCBI nr
Match: XP_038881170.1 (binding partner of ACD11 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 466.1 bits (1198), Expect = 2.1e-127
Identity = 251/288 (87.15%), Postives = 258/288 (89.58%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLAT+R IHEFFSFSGEIEHIEIQCEQG SKTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIA 60

Query: 61  LLL-----------------SGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTE 120
           LLL                 SGATIVDQIVSIS AENHVPR+EMQEVR VDNAACLTPTE
Sbjct: 61  LLLSVFHYLDSLSYPRSQLSSGATIVDQIVSISLAENHVPRREMQEVRVVDNAACLTPTE 120

Query: 121 NNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASA 180
           NNFP  ED ASQPSSGKMYVNRAQ VVATVLAKGS IGQDAMNKAKAFDEKH+LTASASA
Sbjct: 121 NNFPSTEDSASQPSSGKMYVNRAQVVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASA 180

Query: 181 KVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTS 240
           KVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQNLHVSDKTMAAIFAAERKLNDTGSAVKTS
Sbjct: 181 KVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKTS 240

Query: 241 KYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA 272
           KYVTAG AWLNGAFGKVAKAGQAAGTKTREKFHLA+S LTSKE  VVA
Sbjct: 241 KYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESSVVA 288

[Close]

BLAST of CcUC04G063860 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.7e-48
Identity = 109/254 (42.91%), Postives = 161/254 (63.39%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIA 60
           M SQ R+V+V ++S  AT+  I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNE---HSAYVTFKETQGAETA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGK 120
           +LLSGA+I DQ V I  A N+ P                       P      +Q S  +
Sbjct: 61  VLLSGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAE 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
             V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT 
Sbjct: 121 SVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTA 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G S+VNEK+K++DQN  V+++T +   AAE+ ++  GSAV  ++YV  G +W  GAF +V
Sbjct: 181 GTSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRV 228

Query: 241 AKAGQAAGTKTREK 255
           A+A    G KT+EK
Sbjct: 241 AQAAGEVGQKTKEK 228

[Close]

BLAST of CcUC04G063860 vs. ExPASy TrEMBL
Match: A0A0A0LNE8 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G431170 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.2e-130
Identity = 248/271 (91.51%), Postives = 257/271 (94.83%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLAT+R IHEFFSFSGEIEHIEIQCEQG SKTAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPR+EMQEVR  DNAACLTPTENN P IED ASQPSSGK
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQ LHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAISGLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLA+S L SKEPPVVA
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of CcUC04G063860 vs. ExPASy TrEMBL
Match: A0A5D3BPG7 (Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001350 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 4.1e-129
Identity = 246/271 (90.77%), Postives = 256/271 (94.46%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLAT+R IHEFFSFSGEIEHIEIQCEQG SKTAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPR+E+QEVR  DNAACLTPTENN P  ED ASQPSSGK
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREIQEVRVADNAACLTPTENNSPSREDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQ LHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAISGLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLA+S L SKEPPVVA
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of CcUC04G063860 vs. ExPASy TrEMBL
Match: A0A1S3CIA3 (binding partner of ACD11 1-like OS=Cucumis melo OX=3656 GN=LOC103501087 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 4.1e-129
Identity = 246/271 (90.77%), Postives = 256/271 (94.46%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLAT+R IHEFFSFSGEIEHIEIQCEQG SKTAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPR+E+QEVR  DNAACLTPTENN P  ED ASQPSSGK
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREIQEVRVADNAACLTPTENNSPSREDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQ LHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAISGLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLA+S L SKEPPVVA
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of CcUC04G063860 vs. ExPASy TrEMBL
Match: A0A6J1IKN1 (binding partner of ACD11 1 OS=Cucurbita maxima OX=3661 GN=LOC111478298 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 3.0e-127
Identity = 242/271 (89.30%), Postives = 258/271 (95.20%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIA 60
           MQSQTRTVQ ++VSDLAT+R IHEFFSFSGEIEH+EIQCEQG SKTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGK 120
           LLLSGATIVDQIVSISPAEN+VPR+EMQEVRAVDNAA LTPTENNFP IED ASQPSSG+
Sbjct: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQEVVA+VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD++VGLTEKLTV
Sbjct: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQ LHVSDKTMAAIFAAERK+NDTGSAVKTSKYVT+G AWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAISGLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLA+S LTSK  PV A
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA 271

[Close]

BLAST of CcUC04G063860 vs. ExPASy TrEMBL
Match: A0A6J1GFF4 (binding partner of ACD11 1 OS=Cucurbita moschata OX=3662 GN=LOC111453443 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 3.0e-127
Identity = 242/271 (89.30%), Postives = 258/271 (95.20%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIA 60
           MQSQTRTVQ ++VSDLAT+R IHEFFSFSGEIEH+EIQCEQG SKTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGK 120
           LLLSGATIVDQIVSISPAEN+VPR+EMQEVRAVDNAA LTPTENNFP IED ASQPSSG+
Sbjct: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
           MYVNRAQEVVA+VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD++VGLTEKLTV
Sbjct: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G+SVVNEKVKS+DQ LHVSDKTMAAIFAAERK+NDTGSAVKTSKYVT+G AWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240

Query: 241 AKAGQAAGTKTREKFHLAISGLTSKEPPVVA 272
           AKAGQAAGTKTREKFHLA+S LTSK  PV A
Sbjct: 241 AKAGQAAGTKTREKFHLAMSNLTSKGHPVAA 271

[Close]

BLAST of CcUC04G063860 vs. TAIR 10
Match: AT5G32450.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 349.7 bits (896), Expect = 2.0e-96
Identity = 186/265 (70.19%), Postives = 223/265 (84.15%), Query Frame = 0


Query: 5   TRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLS 64
           TR+VQV +VSDLAT+R IHEFFSFSG+IEHIEIQ E G S+ AFVTF DPKALEIALLLS
Sbjct: 4   TRSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLS 63

Query: 65  GATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGKMYVN 124
           GATIVDQIV+I+ AEN+V R+E QEVR +DNA  L   E+     +   +   + + YV+
Sbjct: 64  GATIVDQIVTITRAENYVQRRETQEVRMLDNAMPLGLQEST---TQTKTNMDGNSRAYVS 123

Query: 125 RAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSV 184
           +AQ+VVATVLAKGS +GQDA+NKAKAFDEKH+L A+ASAKV SFDKRVGLTEKL+VG+S 
Sbjct: 124 KAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVGLTEKLSVGISA 183

Query: 185 VNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAG 244
           VNEKVKS+DQ L VSDKTMAAIFAAERKLNDTGSAVK+S+YVTAG AW +GAF KVA+ G
Sbjct: 184 VNEKVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRYVTAGAAWFSGAFSKVARVG 243

Query: 245 QAAGTKTREKFHLAISGLTSKEPPV 270
           Q AG+KT+EKF+LA+S ++SK+ P+
Sbjct: 244 QVAGSKTKEKFNLAVSNMSSKDTPI 265

[Close]

BLAST of CcUC04G063860 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 201.4 bits (511), Expect = 9.0e-52
Identity = 114/252 (45.24%), Postives = 164/252 (65.08%), Query Frame = 0


Query: 7   TVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGA 66
           TV+V +VS  AT R + EFFSFSG+I ++E Q E   +K A+VTF+D +  E A+LLSGA
Sbjct: 5   TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGA 64

Query: 67  TIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGKMYVNRA 126
           TIVD  V +S A ++    E          A L P ++N          P +G   + +A
Sbjct: 65  TIVDSSVIVSMAPDYQLSPEA--------LASLEPKDSN--------KSPKAGDSVLRKA 124

Query: 127 QEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVN 186
           ++VV+++LAKG  +G+DA+ KAK+ DEKH+LT++ASAKV SFDK++G T+K+  G  VV 
Sbjct: 125 EDVVSSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVG 184

Query: 187 EKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQA 246
           EKV+ +DQ   VS+KT +AI AAE+ +++ GSA+  ++YV  G  W+ GAF KVAKA + 
Sbjct: 185 EKVREVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEE 240

Query: 247 AGTKTREKFHLA 259
            G K +EK  +A
Sbjct: 245 VGQKAKEKVGMA 240

[Close]

BLAST of CcUC04G063860 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 198.4 bits (503), Expect = 7.6e-51
Identity = 107/253 (42.29%), Postives = 171/253 (67.59%), Query Frame = 0


Query: 7   TVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGA 66
           TV+V +VS  AT+R + EFFSFSG+I ++E Q E  GSK A+VTF+D +  E A+LL+G+
Sbjct: 5   TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGS 64

Query: 67  TIVDQIVSISPAENH-VPRKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGKMYVNR 126
           TIVD  V+++ + ++ +P   +  + ++  +      +++ P  ED +           +
Sbjct: 65  TIVDSSVTVTMSPDYQLPPDALASIESLKES-----NKSSSPTREDVS--------VFRK 124

Query: 127 AQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVV 186
           A++VV+ +++KG  +G+DA+ KAK+ DEKH+LT++ASA+V SFDKR+G TEK+  G +VV
Sbjct: 125 AEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVV 184

Query: 187 NEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQ 246
           +EKVK +DQ   V++KT +AI AAE+ +++ GSA+  ++YV  G  W+ GAF +V+KA +
Sbjct: 185 SEKVKEVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAE 244

Query: 247 AAGTKTREKFHLA 259
             G K +EK  LA
Sbjct: 245 EVGQKAKEKVGLA 244

[Close]

BLAST of CcUC04G063860 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 192.6 bits (488), Expect = 4.2e-49
Identity = 109/254 (42.91%), Postives = 160/254 (62.99%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIA 60
           M SQ R+V+V ++S  AT+  I EFFSFSGE+E I+IQ       +A+VTF++ +  E A
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQ--SSNEHSAYVTFKETQGAETA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGK 120
           +LLSGA+I DQ V I  A N+ P                       P      +Q S  +
Sbjct: 61  VLLSGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAE 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
             V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT 
Sbjct: 121 SVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTA 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G S+VNEK+K++DQN  V+++T +   AAE+ ++  GSAV  ++YV  G +W  GAF +V
Sbjct: 181 GTSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRV 229

Query: 241 AKAGQAAGTKTREK 255
           A+A    G KT+EK
Sbjct: 241 AQAAGEVGQKTKEK 229

[Close]

BLAST of CcUC04G063860 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 )

HSP 1 Score: 192.2 bits (487), Expect = 5.4e-49
Identity = 109/254 (42.91%), Postives = 161/254 (63.39%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIA 60
           M SQ R+V+V ++S  AT+  I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNE---HSAYVTFKETQGAETA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGK 120
           +LLSGA+I DQ V I  A N+ P                       P      +Q S  +
Sbjct: 61  VLLSGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAE 120

Query: 121 MYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTV 180
             V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT 
Sbjct: 121 SVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTA 180

Query: 181 GMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKV 240
           G S+VNEK+K++DQN  V+++T +   AAE+ ++  GSAV  ++YV  G +W  GAF +V
Sbjct: 181 GTSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRV 228

Query: 241 AKAGQAAGTKTREK 255
           A+A    G KT+EK
Sbjct: 241 AQAAGEVGQKTKEK 228

The following BLAST results are available for this feature:

BLAST of CcUC04G063860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881171.1	1.2e-130	92.62	binding partner of ACD11 1-like isoform X2 [Benincasa hispida]	[more]
XP_004151849.1	4.5e-130	91.51	binding partner of ACD11 1 [Cucumis sativus]	[more]
KAE8652335.1	1.0e-129	91.14	hypothetical protein Csa_022102 [Cucumis sativus]	[more]
XP_008462804.1	8.5e-129	90.77	PREDICTED: binding partner of ACD11 1-like [Cucumis melo] >KAA0066322.1 binding ...	[more]
XP_038881170.1	2.1e-127	87.15	binding partner of ACD11 1-like isoform X1 [Benincasa hispida]	[more]

BLAST of CcUC04G063860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	7.7e-48	42.91	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]

BLAST of CcUC04G063860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNE8	2.2e-130	91.51	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G431170 PE=4 SV...	[more]
A0A5D3BPG7	4.1e-129	90.77	Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CIA3	4.1e-129	90.77	binding partner of ACD11 1-like OS=Cucumis melo OX=3656 GN=LOC103501087 PE=4 SV=...	[more]
A0A6J1IKN1	3.0e-127	89.30	binding partner of ACD11 1 OS=Cucurbita maxima OX=3661 GN=LOC111478298 PE=4 SV=1	[more]
A0A6J1GFF4	3.0e-127	89.30	binding partner of ACD11 1 OS=Cucurbita moschata OX=3662 GN=LOC111453443 PE=4 SV...	[more]

BLAST of CcUC04G063860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G32450.1	2.0e-96	70.19	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	9.0e-52	45.24	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	7.6e-51	42.29	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.2	4.2e-49	42.91	binding partner of acd11 1	[more]
AT5G16840.1	5.4e-49	42.91	binding partner of acd11 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..76 e-value: 4.3E-5 score: 32.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..80 score: 9.405087
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..88 e-value: 2.1E-8 score: 36.2
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 3..268
None	No IPR available	PANTHER	PTHR32343:SF61	RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED	coord: 3..268
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G063860.1	CcUC04G063860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding