CcUC04G063300 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC04G063300
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr04: 18783075 .. 18789279 (+)
RNA-Seq ExpressionCcUC04G063300
SyntenyCcUC04G063300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATTGTTGGAAAAGCAACAAAGAAAATTGGAGGATAAGGAAGATCAGATAGAGAGAACTATAGCTGAATCAAGAAGTTAATGATGATGAGAAAGAAGATTATCTTCTCAAGAGATTGTATGCTGGCAGTTCTTTCACACTGGAGGTATCTTCAAGTTCAAGCTCACGTTCTAACTGACTTCTCGTAGACTTCAAAACATCCTGAAAAGTAAGAACCAAAGTCAGAGATGATAGAGATTCTTCATTTCAACATTATTTATAGACTCAAATGGTCAGATATTAGTAGAAATTATTTACATTGAAATCCATATATGAAGCACGCTTCGCAAGCCATTGAGCATCCATCAATTGGAAGGCTACACAGAACAGGTTATCAAATGCCATCTCGTCATGCTCCAGAAGTTCTAAGAAACGGATCCCTGCCGATGAACCTGGCTTCCCTGCAACAAAATATAATATAAGGTACCTAATTAAAGATATTAGTATGGTATTAACAAGGGTAATTAGCTAGGGAGTTAGTTTATCTTGTTATAAATAGAAGAAGGGTGAGTGAGGGAAGGGAGACAATTGTTCAATATATTTAAGATCATATTCTAGTTAGAAAGTATCCTAACATATAACTTCAATAGTTTATTAATGTCTTGAAATTCTCTCTGAAGAATGAATGACATAGACATGATCGCATATGCGAGCATCGTGATTTTTCTTTTTCTTTTTATAGAAAGAACTTTCGTTAAGAAAAAGTTAGGGGAATACACGGACATAAAAAAAATAAACTCACAAAAACCCATTAAAGAAAGGGGGTTCCAATTAGGTAAAATGATGCCTATAGAATAATTACAAAAGTTCTTCAAGATCGAAACCTAAAAAAGGTTATTGGAACCTACCAAAGAGCAACATCCATCTTACCTGATTGAAGATCTAACATTTGCACCAACATAAACGATATGTTGATACCAGCAACAGCGAACGGATATTCCCACTCAGCTCTCTTACCATCCTTCTTATACAACAATCTGCGGAATGACTCCTGTACAGAAATCCAACCGACCAGAAACCCAACCAACCATTTACACGTATTAATCACAGATGATATATTATCAATTTAGTCAAAAGGAAAGAAATAATATCACTCGGAGATCTAATTAGAATGACTCGCAAAGCAGGACCAACTTGCATGCTTAGGTCCAAAACAAGATATAATGCACATAGGGTTAAATTACGAAATTTAACCCTATGGTTTGATCTATTTGGAAAAGTTAGAATTTAGACCCTATGGTTTTCAAAAGTTAAAATTTGGTTCTTGTGGTTCGGAAAAATCTAAAATTTAGTCCCTATGGTTTGGGAAAAATTAGAATTCAATCCATGCTTTAAGGACCATTTATGAGCGTTTTATCAAACTATAGAAACTAAATTCTAATTTTAAACTATAGGAACTAAACTCTAATTTTTTCTAAATCACCATAGGGGCTAATTTGCAATTTAACCTTCACATATCTGGCAGTACACATTCAGCAAGTCCTTAATAATTTAAGCCAAGTGGAAGTAACAGTCGATCACAATCAAAGGAACATTCTATAGTACACTTTAACTATTTTTTAACCCCAAAGCTTCATAAATCCTCACTTAAATGACTAAAATAAACGTAATGCTTCTCCATATTGCGCTTTTAACCACTAATAAAGTAATCCAATTCCATGGTTTATTAAACAACGACTGTGAGTGTATGTTATTAGTGTTGAAAATAAGGAATGATATTTGGGGATTTCATAGATTTTATATTGTGTATTTTTTCCTTTTATGTTCCCCAATATTCTTTTCTTGTATTGTTTTAGTGCCCTCTAGTGTCTCTATTTATTTTCCCTCTTGTAACATTGTAGAGTATCAAATAATAAGAGAAAAATTAAAACGTGAAGTTTTCTCCTTTTCTAGGGTTTTTCACGTTAACCTATTATTTTCTTTTCTCCTAATTTTAACATGGTATCAGAGCGTGGTGACGAAACCCTAGAAACCCTAGCCTTCATTGACGAAAACAAACCTCAGCATGATCTGCCGCCATCGTCGATGGAGGCCGCTGTCACCACCGAATCCGCCGTCCAAGAAGCTATCGATAGGTATGTGAGATCCCTTAGCCCGAGCGAAGCAGCTATCTTCTTCCACTCACTAGCGCCGTTGACGAGCTTCAAGGTTGCCGCAAGTCAAAACCCTAACGCCACAGCGCTGATGGGATCTGTAGCAACAGCAACTCCAGTCGTTCAGAATGCCACCATCGCTGCTGTCGAGTCGTCAGCCCTCTGTCCCAAAGTCGCCAGCACCCAGTCTTTACTTCTGACCACTATGGCTACGGCCAAATCTGGTGGCTTTTACTCGATTCTGAGGCTACCGCAGGATCTGGTGGGTTCTCTTCAAACATGATTCAACAACTTGCAAACCTCTCGGCAAGTTTGGATATGAATTACCGAAACCCAAACCCGGAGATCCACAGGAGCACATCTGGAAGGGAGAGGACTCCTTACTTCGTTCTCTATTGATTCACAGCATGGAACCTCAAATCGTAAAACCTCTGTTGTATACCGCTACTGCTCAGGACATCTAGGATGCAGTTTAGAAGCTATATTCCAAACGACAGAATGCATCGTGGCTTTGCACCTTAAGGAAACAGATTCATGAATGTAAGCAAGGAACTATGGATGTCACATCATATTTTAACAAACTATCCCTTATTTGGCAAGAAATGGATTTGTGCCAATCTGGGATTGGCCGTATGGAGGAGTTCAACATTATAAAATAGAGGAAATTGACCGTGTATGATTTTTTAGCAGGTCTTAACTCCAAATTTGATGTCGTTCGAGGAAGGATACTGGGACAAAGACCAATACCAACTCTTATGGAAGTTTGTTCCGAGGTTCAACTTGAGGAAGACAGATCCAGTGCTACGAATGTCATACCCATGACCGAATCTGCAGCCTTCAGTGCTAAAACATCTAGTTCCACTGGAGACAAGCAAAATGAGAAACCACCTCCAGTGTGTGAGCGCCGTAAGAAACCCTGGCATACAAAGGATCAGTGCTGGAAGTTACATAGTCGACCACCAAATGGCAAACGACGACCTCCGAACGACAAGCCCAATCCTATCCAGGCCATGGTGAGTGAAACTGCTAGTGGCTCCCAGCCACAATCACAAGTGAATTGCCTAGTAGACTCTAGTGACTCTCATCTCGGGGAGATTGTTCAATCAGGTACATCTCAGTCCTTGAGTCTCCTTAGTGTTAATGGCAAGAAGCCCTGGATTCTTGATTCATTTTCCCTCATATCATCCATGCGCTGGTAATAAAAAAATCGAATTGTTGTTGGCTCCTTTGCTCCGATTGCGGGCAAGGGTCAAGTTTCTCCATTTGATGGCTTGATATTACAAAATATGCTCCACATCCCTAAAATATCTTACAATTTATTATCTGTGAGTAAGATTACTAGAGATCTGAATTGTCGTGTGGCATTCTCACCAATGATATTATTTTTCAAAACTTAAGCTCGAGGACGATGATTGGCATTGCTCGGCACAATGGGGGACTCTACTTCCTTGATGATGATACTTCTTCTAGGTGTAGTTATAGGACTAGTTTGTTGTCTTCCTATTTTTCAACTTCCGAACATGAGTGTATGTTGTGACATTTTCATCTTGGTCATCCAAATTTCCAATATATGAAATATTTATTTCATCATTTGTTCAACAAAGTTGACATTTCCACCCTATCTTGTGACGTGTGCATTCAGGCAAAACAGCATCGAGTCTCCTTTCCATCCCAACCATACAAACCCTCTCGGTCTTTCACTCTTATTCACAGTGATGTTTGGGGACCTTCGAGAGTTACTACCTCTTAGGGTAAGCGCTGGTTTGTGACCTTCATCGATGATCACACTCATCTTACCTGGGTCTTTTTCCTCACTGATAAATCTGAGGTCTCATCCATTTTTCAACAATTTTACACTACCATGGAGACTCAGTTTAATGCCAAAATTATCATCCTTCGGAGTGACAATGGTCGTAAGTTCCTTACTAATGCCCTTAGTGAGTTTTTATCCACTGAAGGTATCGTTCATCAGAGCTTGTGTGCCTATAACCTCCAACAAAATGGAGTGGCTGAAAGAAAAATTCGTCATCTCCTCGAGGTTGCCCAATCCCTCATGCTTTCTACCTCTCTTCCATCATACTTGTGGGGGGCGCAGTTTTGACTGCAGCCTACCTTATAAATCGGATGCCTTCCCATGTGCACCACCTCCAAACCCTTTTTGAGTGCCTCAAAACCTTCTACCCTACCACATGCCTTATTGCTGATGTTCCTCTCCAGGTGTTCAAGTGTACTACGTTTGTCCATAGCTTTGGCCCTAACCAAACTAAGTTTATCCCCTGTACTCAAAAATGTGTTTTTGTTGGGTACCCTCTCCACCAACGAGGATACAAATGCTTCCATCCTTCATCCCGAAAATACTTCATCTCTACGGACATCACTTTCCTTGAGGATAAACCCTTCTTTCCCGTTAGTCCTCTTCAGGGGGAGAGTAGTAGTGAAGAGACTAACTGTTCATCACTTCCAACTCCCATTGATATTCTTCCTACACCACTTCCTATCCTAAGTACCCAAGACACTGTTCAAACTACCAGACAGGTCCTCTGGATAACTTACTACAGGAAGAATCTCAGAAAGGAAGTGTTATTCCCTACTGATTCGCCAGCTCCAGTCTCAGCACCTGAACCAACACAAGCTCAAGGTATGACTATAATGCTAAATTGGGAGACTCTGTTGACAAAGTCCCAGTTAATAAAGAAAGGTACCAACACCTTGTTGCAAGACTAATTTACCTAGCTCGCACTCGACCAGACATTTCCTATGTTATCAGTGATGTTAGCCAATTTATGCAGGCACCCTACGAAAAACACATGGAAGCTATAAACCGAATTCTGAGGTATTTGAAAAGTACTCCAGGAAAAGGTTTGATGTTTAGAAAAACCAACAGGAAATGCATTGAGACCTATACCGACTCTGACTGGGCATGATCAGTAATTGACATAAAGTCCACATCTGGGTATTGTACCTTTGTTTAGGGTAATCTTGTAACGTGGAGAAGTAAAAAGCAAAGTATGGTTGTTAGAAGTAGTGCCGAAGCTGAATATAAAGCCATGAGTAAGGGCATTTGTGAAGAAATCTGGTTGAAGAAAGTCATTTCTGATCTCCACCAAAACAATGACTTACCAATGAAACTTTACGTTATAATAAAGCTGCTATTAGCATTGCTAACAACCCAGTTCAACATGATAGAACAAAATATATGGAGATTGATCGACACTTCATAAAGGAGAAACTGGAAAACAGAAGTATCTGTATTCCTTATATTCTATCTAGCCAACATGTTGCTGATGTTCTCACCAAAGGGTTACGTAAGCAGAGTTTTGACTCATGTATTAGCAAGACAAGTCTCACTGATATCTATGTCCCATCTTGAGGGGGAGTGTTGAAAATAAGGAATGATATTTGGGGATTTTTTAGATTTTATATTGTGTATTTTTTCCTTTTATGTTCCACAATATTCTTTCCTTGTATTGTCTTAGGGCTCTCTAGAGACTATTTATTTTCACATGGTAGAGTATCAAATAATAAGAGAAAAATTAAAACGTGAAGTTTTCTCCTTTTCTAGGGTTTTTCACATAAACCTATTATTTCTTTTTTCTCCTAATTTTAACAATTAGATATTTACATTTATTACTATATATCTGATCAAAGAATCAGGTATATGAACATAAGAGAAAAGATAAAGCGTCAAACAAGAATATGATACAAAAATCATCATATTTCAGAAGAGAAAATATGACAACATAGGAAAAGGAAACAAACCGGATATGTCTGGGCAAAGAAGATAAGGTTTTCCAGTGAAACAAATCCACCACCTCTACAAGAATTAGAAGAGTACTAAATATTAACAGAAGAGAGATGAAACAAACAAAGTATCACTTCGAAAGATCAAAGATTGTGCTCACCTAAAATCTGTTGAAGGATCGGTACCCTGCCAACCCATGTCCTTCCAGAGCTCAGATTTAAGAGGTGGAAGCTCCCTGTCTGGATATGCCAACCTCCATAACCTTTTCAGAGCATCCTACAGTGCATGGATTCATTTATTTTTCCATCCAAAAAAATGTAGTGAATAA

mRNA sequence

ATGCAATTCACGCTTCGCAAGCCATTGAGCATCCATCAATTGGAAGGCTACACAGAACAGAAGAGAGATGAAACAAACAAAGTATCACTTCGAAAGATCAAAGATTGTGCTCACCTAAAATCTGTTGAAGGATCGGTACCCTGCCAACCCATGTCCTTCCAGAGCTCAGATTTAAGAGGTGGAAGCTCCCTGTCTGGATATGCCAACCTCCATAACCTTTTCAGAGCATCCTACAGTGCATGGATTCATTTATTTTTCCATCCAAAAAAATGTAGTGAATAA

Coding sequence (CDS)

ATGCAATTCACGCTTCGCAAGCCATTGAGCATCCATCAATTGGAAGGCTACACAGAACAGAAGAGAGATGAAACAAACAAAGTATCACTTCGAAAGATCAAAGATTGTGCTCACCTAAAATCTGTTGAAGGATCGGTACCCTGCCAACCCATGTCCTTCCAGAGCTCAGATTTAAGAGGTGGAAGCTCCCTGTCTGGATATGCCAACCTCCATAACCTTTTCAGAGCATCCTACAGTGCATGGATTCATTTATTTTTCCATCCAAAAAAATGTAGTGAATAA

Protein sequence

MQFTLRKPLSIHQLEGYTEQKRDETNKVSLRKIKDCAHLKSVEGSVPCQPMSFQSSDLRGGSSLSGYANLHNLFRASYSAWIHLFFHPKKCSE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018117DNA methylase, C-5 cytosine-specific, active sitePROSITEPS00094C5_MTASE_1coord: 40..52

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC04G063300.1CcUC04G063300.1mRNA