Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTCAATGAGTTCTTGTAATGCGTTTTCCGTGGCTTGCGCTCTCGTCCTCCTTGGGTTGCACATTGCAATCTACCAAGCAGATGCTAAAAATGTTTTTGTAGACGACGGAGGCTTCCCTATTATAGACAACGTATTGAGTGACCCGAGTATAAAGCATCCAGAAAGGCATCTCCGTTTCTCAACAGGGAAACCCAAGAGGGTACCTGACTTAGATCCACCTTCCAGCGTGGGAATACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGCCCGAGAACTTCGGACAATCCACCTCCCCCACCGCATGTCTCGTCCACCATTTTGCACAAGCAATCTAGCATCAACTTCGGAGTGTTACCGAAAGGTGAGCGTATTCCTCCGTCTGGGCCGAGCCAAAGAACTTCAGAGAGTCCACCTCCCCCACCGCATGCCCCGTCCGTCATTTTGCACGAGGAATCTGGGATCAGCTTTGGAATATTACCGAAAGGCGTGCGTATTCCACCGTCAGGGCCGAGTACAAGATCTTCGGACTATCCACCGCCCCCACCTCATGCTCCTTTCGTTGTTTTAAAGAAAGAATCTAGGGTTAGATTTGGGATGTATCCTAAAAATAACCCCATTCCACCATCTGCTCCAAGCGGACGAGTACCATCATGA
mRNA sequence
ATGGTGTCAATGAGTTCTTGTAATGCGTTTTCCGTGGCTTGCGCTCTCGTCCTCCTTGGGTTGCACATTGCAATCTACCAAGCAGATGCTAAAAATGTTTTTGTAGACGACGGAGGCTTCCCTATTATAGACAACGTATTGAGTGACCCGAGTATAAAGCATCCAGAAAGGCATCTCCGTTTCTCAACAGGGAAACCCAAGAGGGTACCTGACTTAGATCCACCTTCCAGCGTGGGAATACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGCCCGAGAACTTCGGACAATCCACCTCCCCCACCGCATGTCTCGTCCACCATTTTGCACAAGCAATCTAGCATCAACTTCGGAGTGTTACCGAAAGGTGAGCGTATTCCTCCGTCTGGGCCGAGCCAAAGAACTTCAGAGAGTCCACCTCCCCCACCGCATGCCCCGTCCGTCATTTTGCACGAGGAATCTGGGATCAGCTTTGGAATATTACCGAAAGGCGTGCGTATTCCACCGTCAGGGCCGAGTACAAGATCTTCGGACTATCCACCGCCCCCACCTCATGCTCCTTTCGTTGTTTTAAAGAAAGAATCTAGGGTTAGATTTGGGATGTATCCTAAAAATAACCCCATTCCACCATCTGCTCCAAGCGGACGAGTACCATCATGA
Coding sequence (CDS)
ATGGTGTCAATGAGTTCTTGTAATGCGTTTTCCGTGGCTTGCGCTCTCGTCCTCCTTGGGTTGCACATTGCAATCTACCAAGCAGATGCTAAAAATGTTTTTGTAGACGACGGAGGCTTCCCTATTATAGACAACGTATTGAGTGACCCGAGTATAAAGCATCCAGAAAGGCATCTCCGTTTCTCAACAGGGAAACCCAAGAGGGTACCTGACTTAGATCCACCTTCCAGCGTGGGAATACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGCCCGAGAACTTCGGACAATCCACCTCCCCCACCGCATGTCTCGTCCACCATTTTGCACAAGCAATCTAGCATCAACTTCGGAGTGTTACCGAAAGGTGAGCGTATTCCTCCGTCTGGGCCGAGCCAAAGAACTTCAGAGAGTCCACCTCCCCCACCGCATGCCCCGTCCGTCATTTTGCACGAGGAATCTGGGATCAGCTTTGGAATATTACCGAAAGGCGTGCGTATTCCACCGTCAGGGCCGAGTACAAGATCTTCGGACTATCCACCGCCCCCACCTCATGCTCCTTTCGTTGTTTTAAAGAAAGAATCTAGGGTTAGATTTGGGATGTATCCTAAAAATAACCCCATTCCACCATCTGCTCCAAGCGGACGAGTACCATCATGA
Protein sequence
MVSMSSCNAFSVACALVLLGLHIAIYQADAKNVFVDDGGFPIIDNVLSDPSIKHPERHLRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHEESGISFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVVLKKESRVRFGMYPKNNPIPPSAPSGRVPS
Homology
BLAST of CcUC04G062880 vs. NCBI nr
Match:
XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])
HSP 1 Score: 257.7 bits (657), Expect = 9.2e-65
Identity = 133/192 (69.27%), Postives = 150/192 (78.12%), Query Frame = 0
Query: 1 MVSMSSCNAFSVACALVLLGLHIAIYQADAKNVFVDDGGFPIIDNVLSDPSIKHPERHLR 60
MVS+S N F ACA + LGLH IYQ DAKNVFV + G I+N LSD +IKHP+RH+
Sbjct: 1 MVSISYSNVFFGACAFIFLGLHSTIYQTDAKNVFVVEKGDSTIENELSDENIKHPKRHIH 60
Query: 61 FSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFG 120
FS GK KR+PDL PP ++GILSKEER PSG S TSDNPPPPPHV S ILHK+S INF
Sbjct: 61 FSLGKYKRIPDLAPPFNLGILSKEERVPPSGLSQSTSDNPPPPPHVISIILHKESRINFR 120
Query: 121 VLPKGERIPPSGPSQRTSESPPPPPHAPSVILHEESGISFGILPKGVRIPPSGPSTRSSD 180
VL KG RIPPSGPSQRTSESPPPPPHA SVILH++ GI+FGILPK + IPPSGPS R S+
Sbjct: 121 VLSKGNRIPPSGPSQRTSESPPPPPHALSVILHKKPGINFGILPKSMHIPPSGPSKRFSN 180
Query: 181 YPPPPPHAPFVV 193
YP PP HAP V+
Sbjct: 181 YPSPPTHAPSVI 192
BLAST of CcUC04G062880 vs. NCBI nr
Match:
KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 197.2 bits (500), Expect = 1.5e-46
Identity = 114/215 (53.02%), Postives = 142/215 (66.05%), Query Frame = 0
Query: 8 NAFSVACALVLLGLHIAIYQADAKNVFVDDGGFPIIDNVLSDPSIKHPER-HLRFSTGKP 67
+A + C L + + +Y+ DAK V D I + L+D +KHP+ + S
Sbjct: 9 HAVELTCTLTRCQI-VQVYETDAKKVVEVDVYDTIREEELTDQMVKHPKGISISSSRSSQ 68
Query: 68 KRVPDLDPPSSV--GILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPK 127
+ + L PP V +L K +PSGPS RTSD PPPPP SS IL KQS INFG+LPK
Sbjct: 69 RTLFHLTPPPPVVLRMLPKGVPISPSGPSQRTSDYPPPPPRASSVILSKQSKINFGMLPK 128
Query: 128 GERIPPSGPSQRTSESPPPPPHAPSVILHEESGISFGILPKGVRIPPSGPSTRSSDYPPP 187
G IPPSGPSQRTS+ PPPPP A SVIL+++S I+FG+LPKGV IPPSGPS R+S+YPPP
Sbjct: 129 GVPIPPSGPSQRTSDYPPPPPRASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSNYPPP 188
Query: 188 PP-HAPFVVLKKESRVRFGMYPKNNPIPPSAPSGR 219
PP HA V+L +S++ FGM PK PIPPS PS R
Sbjct: 189 PPLHASSVILNTQSKINFGMLPKGVPIPPSGPSQR 222
BLAST of CcUC04G062880 vs. NCBI nr
Match:
KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 194.9 bits (494), Expect = 7.3e-46
Identity = 112/195 (57.44%), Postives = 137/195 (70.26%), Query Frame = 0
Query: 1 MVSMSSCNAFSVACALVLLGLHIAIYQADAKNVFVDDGGFPIIDNVLSDPSIKHPERHLR 60
MVS+ + N F ACAL+ LGLH IY +AK FV D ++NVL I HP++
Sbjct: 1 MVSVGT-NIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAH 60
Query: 61 FSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFG 120
FS KPK++PDL PP S+GILSK RT PSG S TS+N PP PHV+ ILHK+S +NFG
Sbjct: 61 FSWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNN-PPSPHVAPIILHKESMVNFG 120
Query: 121 VLPKGERIPPSGPSQRTSESPPPPPHAPSVILHEESGISFGILPKGVRIPPSGPSTRSSD 180
+LPKG RIPPSGPS+RTS+ PPP + S+ +ES I +GILPKGVRIPPSGPS R+SD
Sbjct: 121 ILPKGVRIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPSGPSKRNSD 180
Query: 181 YPPPPP---HAPFVV 193
Y PPPP HAP ++
Sbjct: 181 YYPPPPMHLHAPSII 190
BLAST of CcUC04G062880 vs. NCBI nr
Match:
XP_031744042.1 (proline-rich receptor-like protein kinase PERK9 [Cucumis sativus])
HSP 1 Score: 181.8 bits (460), Expect = 6.4e-42
Identity = 108/205 (52.68%), Postives = 132/205 (64.39%), Query Frame = 0
Query: 14 CALVLLGLHIAIYQADAKNVFVDDGGFPIIDNVLSDPSIKHPERHLRFSTGKPKRVPDLD 73
C LVLLGL +YQ + N+F + +++N I HP++H+RFS K KR+PD D
Sbjct: 6 CVLVLLGL---LYQTNGINLFEVNEENSVLENEFKAHVIIHPKQHIRFSRTKSKRIPDFD 65
Query: 74 PPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKGERIPPSGP 133
S GILSK R PSGPS R+SD+ PPP S +LHK+S +NFG+LPKG SGP
Sbjct: 66 THSGFGILSKAIRIPPSGPSQRSSDSTPPP----SIVLHKESMMNFGILPKGVPTHSSGP 125
Query: 134 SQRTSESPPPPPHAPSVILHEESGISFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVVL 193
SQR S+SPP PP PS++LH+ES I FGILPKGV SGPS R SD PPPPP P +VL
Sbjct: 126 SQRFSDSPPSPP--PSIVLHKESRIKFGILPKGVPTHSSGPSRRFSDSPPPPP--PSIVL 185
Query: 194 KKESRVRFGMYPKNNPIPPSAPSGR 219
KESR+ FG+ K S PS R
Sbjct: 186 HKESRINFGILSKGVRTHSSGPSRR 199
BLAST of CcUC04G062880 vs. NCBI nr
Match:
XP_022967687.1 (actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima])
HSP 1 Score: 180.6 bits (457), Expect = 1.4e-41
Identity = 104/197 (52.79%), Postives = 129/197 (65.48%), Query Frame = 0
Query: 25 IYQADAKNVFVDDGGFPIIDNVLSDPSIKHPERHLRFSTGKPKRVPDLDPPSS---VGIL 84
IY+ DAKNV D I + L+D +++P+ S+ +R PS G+L
Sbjct: 185 IYETDAKNVVEVDVDDNIREAELTDLIVQNPKGISISSSRSSQRTLFHRTPSPSLVFGML 244
Query: 85 SKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESP 144
K PS PS RTSD PPPPP SS IL+K S IN G+LP+G IPPSGPSQRTS+ P
Sbjct: 245 PKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDYP 304
Query: 145 PPPPHAPSVILHEESGISFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVVLKKESRVRF 204
PPPPHA SVIL+++S I+FG+LPKGV IPPSGPS R+S YPPPPP A V+L K+S++
Sbjct: 305 PPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPPRASSVILNKQSKIYL 364
Query: 205 GMYPKNNPIPPSAPSGR 219
GM P+ PIPP S R
Sbjct: 365 GMLPRGVPIPPPGLSQR 381
BLAST of CcUC04G062880 vs. ExPASy TrEMBL
Match:
A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)
HSP 1 Score: 194.9 bits (494), Expect = 3.6e-46
Identity = 112/195 (57.44%), Postives = 137/195 (70.26%), Query Frame = 0
Query: 1 MVSMSSCNAFSVACALVLLGLHIAIYQADAKNVFVDDGGFPIIDNVLSDPSIKHPERHLR 60
MVS+ + N F ACAL+ LGLH IY +AK FV D ++NVL I HP++
Sbjct: 1 MVSVGT-NIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAH 60
Query: 61 FSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFG 120
FS KPK++PDL PP S+GILSK RT PSG S TS+N PP PHV+ ILHK+S +NFG
Sbjct: 61 FSWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNN-PPSPHVAPIILHKESMVNFG 120
Query: 121 VLPKGERIPPSGPSQRTSESPPPPPHAPSVILHEESGISFGILPKGVRIPPSGPSTRSSD 180
+LPKG RIPPSGPS+RTS+ PPP + S+ +ES I +GILPKGVRIPPSGPS R+SD
Sbjct: 121 ILPKGVRIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPSGPSKRNSD 180
Query: 181 YPPPPP---HAPFVV 193
Y PPPP HAP ++
Sbjct: 181 YYPPPPMHLHAPSII 190
BLAST of CcUC04G062880 vs. ExPASy TrEMBL
Match:
A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 6.9e-42
Identity = 104/197 (52.79%), Postives = 129/197 (65.48%), Query Frame = 0
Query: 25 IYQADAKNVFVDDGGFPIIDNVLSDPSIKHPERHLRFSTGKPKRVPDLDPPSS---VGIL 84
IY+ DAKNV D I + L+D +++P+ S+ +R PS G+L
Sbjct: 185 IYETDAKNVVEVDVDDNIREAELTDLIVQNPKGISISSSRSSQRTLFHRTPSPSLVFGML 244
Query: 85 SKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESP 144
K PS PS RTSD PPPPP SS IL+K S IN G+LP+G IPPSGPSQRTS+ P
Sbjct: 245 PKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDYP 304
Query: 145 PPPPHAPSVILHEESGISFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVVLKKESRVRF 204
PPPPHA SVIL+++S I+FG+LPKGV IPPSGPS R+S YPPPPP A V+L K+S++
Sbjct: 305 PPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPPRASSVILNKQSKIYL 364
Query: 205 GMYPKNNPIPPSAPSGR 219
GM P+ PIPP S R
Sbjct: 365 GMLPRGVPIPPPGLSQR 381
BLAST of CcUC04G062880 vs. ExPASy TrEMBL
Match:
A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)
HSP 1 Score: 178.3 bits (451), Expect = 3.4e-41
Identity = 101/192 (52.60%), Postives = 127/192 (66.15%), Query Frame = 0
Query: 1 MVSMSSCNAFSVACALVLLGLHIAIYQADAKNVFVDDGGFPIIDNVLSDPSIKHPERHLR 60
M+S+SS F CA+VLLGLH IYQ + +N+F + +N L SI HP++++
Sbjct: 1 MMSISSNMTFK-TCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIH 60
Query: 61 FSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFG 120
FS K K P+ D GI SK+ R PSGPS R+SD+PP P S IL K+S INFG
Sbjct: 61 FSLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSP----SMILPKESRINFG 120
Query: 121 VLPKGERIPPSGPSQRTSESPPPPPHAPSVILHEESGISFGILPKGVRIPPSGPSTRSSD 180
+LPKG RIPPSGPSQR S+SP P PS LH+ S + FG+LPKG IPPSGPS R+SD
Sbjct: 121 ILPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHIPPSGPSKRTSD 180
Query: 181 YPPPPPHAPFVV 193
PPPPPH+P ++
Sbjct: 181 NPPPPPHSPSLI 183
BLAST of CcUC04G062880 vs. ExPASy TrEMBL
Match:
A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1)
HSP 1 Score: 139.4 bits (350), Expect = 1.8e-29
Identity = 98/233 (42.06%), Postives = 122/233 (52.36%), Query Frame = 0
Query: 1 MVSMSSCNAFSVACALVLLGLHIAIYQADAKNVFVDDGGFPIIDNVLSDPSIKHPERHLR 60
M+S SS N CAL+LLGLH Y DA++ V G +I+N L+D I+HP+RH+R
Sbjct: 8 MMSTSS-NVLFGTCALILLGLHFETYHIDARSFSVFGEGNYVIENQLTDHVIEHPKRHIR 67
Query: 61 FSTGKPKRVPDLDPPSSVGILSKEERTTPS---------------------GPSP-RTSD 120
FS KPKRVPDL PP S+GIL+K+ T PS P P R D
Sbjct: 68 FSWPKPKRVPDLAPPFSLGILTKDILTPPSENELGDNIVKHPKSHIRFSWVWPKPKRVPD 127
Query: 121 NPPP------------PPHVS----STILHKQSSINF-----------------GVLPKG 179
PP PP + S H ++ I F G+L K
Sbjct: 128 LAPPFSLGILNNHLRNPPSENELGHSITKHPKNHIRFSWPKPKRVPDLAPPFSLGILLKD 187
BLAST of CcUC04G062880 vs. ExPASy TrEMBL
Match:
A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1)
HSP 1 Score: 133.3 bits (334), Expect = 1.3e-27
Identity = 96/233 (41.20%), Postives = 118/233 (50.64%), Query Frame = 0
Query: 1 MVSMSSCNAFSVACALVLLGLHIAIYQADAKNVFVDDGGFPIIDNVLSDPSIKHPERHLR 60
M+S SS N ACAL+LLG H Y DA+ V G +I+N L+D I+HP+RH+R
Sbjct: 1 MMSTSS-NVLFGACALILLGFHFETYHIDARRFSVVGEGNYVIENQLTDHVIEHPKRHIR 60
Query: 61 FSTGKPKRVPDLDPPSSVGILSKEERTTPS---------------------GPSP-RTSD 120
FS KPKRVPDL PP S+GIL+K+ T PS P P R D
Sbjct: 61 FSWPKPKRVPDLAPPFSLGILTKDVLTPPSENEVGDNIVKHPKNHIRFSWIWPKPKRVPD 120
Query: 121 NPPP------------PPHVS----STILHKQSSINF-----------------GVLPKG 179
PP PP + S H +S I F G+L K
Sbjct: 121 LAPPFSLGILNNHLRTPPSENELGHSITKHPKSHIRFSWPKPKRVPDLAPPFSLGILSKD 180
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038882352.1 | 9.2e-65 | 69.27 | uncharacterized protein LOC120073615 [Benincasa hispida] | [more] |
KAG6603169.1 | 1.5e-46 | 53.02 | hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAA0040932.1 | 7.3e-46 | 57.44 | proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK1060... | [more] |
XP_031744042.1 | 6.4e-42 | 52.68 | proline-rich receptor-like protein kinase PERK9 [Cucumis sativus] | [more] |
XP_022967687.1 | 1.4e-41 | 52.79 | actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CGG1 | 3.6e-46 | 57.44 | Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A6J1HRH7 | 6.9e-42 | 52.79 | actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3... | [more] |
A0A5D3BP86 | 3.4e-41 | 52.60 | Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A5A7T8R0 | 1.8e-29 | 42.06 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3BVE5 | 1.3e-27 | 41.20 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |