CcUC04G062620 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G062620
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic
Location	CicolChr04: 16624690 .. 16635459 (+)
RNA-Seq Expression	CcUC04G062620
Synteny	CcUC04G062620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGACATTCTCGCTTCTGCTTTGTCCACCACTGGTCGCGCAGGTGCTTCCCTCTAAGGCGAAACGCTCCCCTACCGATGCATTTTTACATCCCACAGCTTCAGCAGATCGCTTAGCCCCGTTCATCTTCAGCGTAAGAGCGCTCGATCAGTGAGCTATTACACACTCTTTCAAGGGTGGCTGCTTCTAAGCAAACCTCTTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGTTTATCCCCTATCGTCTCACTGGCCGACCTTGACCCTTATTATTTTGAGATCATATCTAGTATTCAGAGTTTGCCTCGATTTGGTACCGCTCTCGTGGCCTGCACCGAAACAGTGTGTTACCCCTAGATGTCCAGTCAACTGCTGTGCCTCAATGCATTTTGGGGAGAACCAGCTAGCTTTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGTTGATTCTTCAACATTAGTCGGTTCGAACCTCCACTTAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCTAGGTTTAGGTCCATAAGCAGTGACAATTGCCCCATGAAGACTCGTTTTCGCTACAGCTCCGGTGGGTTCCCTTAACCGAGCCACTGCCTATGAGTCGCTGGCTCATTCTTCAACAGGCACACGGTCAGAGTCCTAGTCTCCTCCCACTGCTTGAAAGCTTACAGTTTCATGTTCTATTTCACTCCCGATGGTGGTTCTTTTCACCCTTCCCTCACGGTACTACTTTACTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGAAATTCCACGTGCCCCATGCTACTCGGGTCAGAGCGTAAGCTAGTGATGCTTTCGGCTACTAGACTCTCGCCATCTAGGGTGCAACACTCCACCGCTTCGCCTAGCAGCACGACACTTGTATTGCTCTCCCACAACCCCGTTTTCACGGTTTAGGCTGCTCCCATTTCGCTTGCCGCTACTACAGGAATCGCTTTTGCTTTATTTTTCTCTGCTTACTAAGATGTTTCAGTTCGTGAGGTTGTCTTTTGCCTGCCCATGGATTCAGCAGCAGTTTGAAAGGTTGACCTATTCGGGAATCTCCGGATCTACACTTATTTTCAACTCCCCGAAGCATTTCGTCGCTTACTACGCCCTTCCTCATCTCTGGGTGCCTAGGTATCCACCGTAAGCCTTTCTTCGTTTGAACTTCACCCTTAACTTTAAGGCTATGCCATCCTAAGGTGCTGCTAAATGGAAGGATCTTATCAACATCCATGAATGATAAATCATAGATCGAACTGCCGAATCAGAAAAATGGAGTGCTATCATATAGCTTTGTATCGGCTAAGTTCACGAGTTGGAGATAAGCAGACTCGAACCACTGACATCCGCCACAGGGTAAACCACCATCTCTCAGGCCCCCGACTGATTCTACTATAGAGGCCAACGATAGACAATAACTCCCCCCCGAACACAGCTTAGAACTTCCATTGTACTATGCTCTCCAAAGAGCAACTCTTCTCAAATTCTCAAAAGGTACTGAGTTGGAATCCCATTCTAACTAAGGATTCTTGTGGTTTTGGAGAATCGAGCTACAGGAGAACCAGGAACGGAGAACTTTCCCCCCTTTTTCGCCCGCCTCTTTGGTCTTAAGAATGCTGGTTTTAAGAATGAGTCATTGCCCTTCTCCGACCCTTACTACCCAACTGAAGAACGGACAGCTAATGTGTTCCACTTATTGAACAGGGTTCTATGGTCGGTCCGTGACCCCTGGATACCGAAGGCGTCCTTGGGGTGATCTCGTAGTTCCTACAGGGTGGAGACGATGGGGTCGGTCCATGGATTTTCCTTCCTTTTGTCGCATTTCGCTCAAAGGGTTGAAGGGAGATAGTGCATCAAGCTGTTCGCAAGGGCCAACTTGATCCTCTTCCCTAGGGATCCCAGATGAGGGAACCCTAAGAGAGCCGTTGACTCCAACTACCATCCATGTACGATCCATACTAGATCTGACCAACTGTCCATCCTACCTCCTCTACGTTCTTGACAGCCCATCTTTGTCTCAGTAGAGTCTTTCAGTGGCATGTTTCGGTCCTCTTCCCCATTACTAAGAAAAAGTGAGCCACCAGTTCAGGTACAAGATACTATCATTATCGCCTGGACAATTAGACATCCAACCCGTAATCGCAACGACCCAATTGCAAGAGCGGAGCTCTACCAACTAAGTTATATCCCCCCTGAGCCAAGTGGGGCCTGCATGAAGGAGTCAAATGCTTCTTCTATTCTTTTATTCTTTTCCTTGGCGTAGCTATGCGATCCTGGACTTGAACCAGAGACCTCGCCCGTGAAGTAAATCATCGCACCTAGGTCCAACCAATTGGGAGAGAATCAATAGATTCCTTTTCGGGAGTGATTCATCCTTCTCGAACGCAACATACAACTCTTGAACGCAGCATACAACTCTCTGTTGTACTGCGCTCTCCAAGTGTGCTTGTTCCCCCCTTCTTCCTTACCATGGCAAGTCTTTGTGAAATAACGCCGATGAGAAGAAAAAAGAAGGCGTTAAGAAACCCTCCTTGCCCAACCCTAGCACTCTAAGATCCTTTTTCAAATCTCCTGTCCTTGCGGAAGAAAGGAAAAAGAATTTCACGTTCTTCCTTTCGCTTTCAGGAAGGGAGGATTAAGAAAATCCTATTGATTGCAGCTTTCTCCAGACCTCCGGGAAAAGCATGAAAAAAAAAAAGCTCGAATGGTACGATCCCTTCGTCACCCCAGAATGAAAGGGGCGATCTCGTAGTTCTTGGTCTGTGAAGATACGTTGTTAGGTGCTCCGTTTTATTTTCCCATTGAGCGAACCTAAACCTGTGCTCGAGAGATAACTGTCCATATACTGATAAGGGATGTATGGATTCTCGAGAAGAGAGGAGCCGAGGTGGTCCCCCTCGAACCGCCCGAATCCCACGAGTGAATAGAAAGTTGGATCTACATTGGATCTCACCTGAATCGCCCCATCTATCCCCCTGAGAAGAAGTTTGGTTTCAAACCCCAGTTCAAACAGGAGAAGTACGCCATGCTAATGTGCCTTGGATGATCCACATCTCAGGGTCAGGCGCTGATGAGCACATTGAACTATCTATGTGGCTGAGAGCCCTCAAAGCCCAGGCACAACGACGCAATAGCCCGTTGTGCGGGCCTCCCGCTAGGGGCTTGCCATGCCAAAAGCGAGAGAAACCCCATCCCTCTCTTTCCTTTTTTCGCCCCCATGTCGCCACACGGAAGGGACACGGGGACGTAAAAAAAGGGATCCTATCAACTTGTTCCGACCTAGGATAATAAGCTCATGAGCTTAGTCTTACTTCACCGTCGAGAAACGAAAGAAGACTTCCATCTTCAAGTTTAACTCAGACGTAGCTCGCTTCTTTTTGGGTGTGAAGCAATGTCAAACCAAAATACCCAACAAGCATTAGCTCTCCCTGAAAATGAGGTGATCCAGCTGCACCCTCCAGTACGGTTACCTTGTTACGACTTCACTCCAGTCACTAGCCCTGCCTTCCGCATCCCCCTCCTTGCGGTTAAGGTAACGACTTTGGGCATGGCTAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGAGAACGAATTCACCGCCGTATGGCTGACAGGCGATTACTAGCGATTCCAGCTTCATGCAGGCGAGTTGCAGCCTACAATCTGAACTGAGGATTGGTTTTTGGAGTTAGCTCACCCTCGCAGGATCACGACTCTTTGTCCCAGCCATTGTAGCACGTGTGTTGCCCAAGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCACCGGCAGTCTGCTCAAGGTTCCAACCTCAACAGTTGGAAACTAAACACGAGGGTTGCACTCGTTGCGGGACTTAACCGAACACCTTACGGCACGAGCTGACGACAGCTATGCACCACCTGTGTCCGCGTTCCCGAAGGCACCCCTCTCTTTCAAGAGAATTCGCGACATGTTAAGCCCTGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCACTTGTGCGGGCCTCCGTCAATTCCTTTCAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGCGTTAGTTAAACCACTGCAGGGGTCGATATGCACAGTGCCTAGTATCCATCGTTGATGGCTAAAACTACTGGGGTATCTAATCCCATTCACTCCCCTAGCTTTCTTCTCTTAGTGTCAGTGTCAGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTTCCGATCTCTACGCATTTCACCACTCCACCGAAAATTCCCTCTACCTCTACCATACTCCAGCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCAAACTTAAAAAACCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTTTGTATTACTGCGGCTACTGGCACAAAGTTAGTCGATGCTTATTCCCCAGATTCCGTCATTGTTTCTTCTCCAGGAAAAGAAGTTCACAACCTGTAGGCCTTCTACCTCCACACGGCATTGCTCCGTTAGGCTTCGCCCATTGTGGAAAATTCCCCACTACTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGATCATCCTCTCGGACCAGCTACTGATCATCGCTTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGTGAGCCCCTCCTCGGGCGGATTCCTCCTTTTGCTCCTCAGTGTATGGGGTATTAGTAGCCGTTTCCAATTGTTGTTCCCCTCCCAAGGGCAGGTTTTTATGCGCTACTCACCCGTCCACCATTGGAAACACCACTTCCCGTCAGACTTGCATGTGTTAAGCATGCCGCCAGCATTCATCTTGAGGCAGGATCGAACTCTCCATGAGATTCATAGTTGCATTACTTATAGCTTGTTCGTAGACAAAGCTAATTCGAAATTGTCTTTCGTTCCAAGGCATAACTTGTATCCGTGCGCTTCATATTCGCCTGGAGTTCGCTCCCAGAAATATAGCCATCCCCACCCCTTCACGTCAGTCCCACGAGCCTCTTATCCATTCTCATTCGATCACGGCGGGGGAGCAAGTAAAAATAGAAAAACTCACATTGTGTTTAGGGATAATCAGGCTCGAACTATTGACTTCCGCCACATCAAGGCGACACTCTACCGCTGAGTTATATCCCTTCCCTTGCCCCCATCGAGAAATAGAACTGACTAATCCTAAGGCAAAGGGTCGAGAAACTCAACGCCACTATTCTTGAACAACTTGGAATTCGGCCTTCCTTCTTTTCGCACTATTACGGATACAAAAATGAAAATAATGGGCAAAATTGGATTCAATTGTCAACAGCTCCTATCGTAAATAGGATTGACTACGGATTCGAGCCATAGCACACGGTTTCATAAAACCGTACGATTTTCCCGATCTAACTAAAGCAATTTTACATTAAGAAGATTTGGCTCAGCATGTTCTATTCGATACGGGTAGGAAAAGAACTCAACTCGGTATTATTAAAAAAATAGAGAAATCAAAACCCAGTCAAGATGATATGGATCAACCCGTTCTTCTTGTGCCAAAGATCTTACCATTTCCGAAGGAACTGGAGTTACATCTCTTTTCCATTTCCATTACAGAGTTTTTATGTGTTTCCACACCCCTTCGAGACCCCAAAATATGAACAACTTTTCTTCGGAACACATACAAGATTTGTCGTTGCAAAAAGGATAATGGTAACCCCACCATTAACTACTTCATTTATGAATTTCATAGTAATAGAAATACATGTCCTATTGCGACAAAATTTGTAACTTGTTATCCTCTTGCCTAGCAGGCAAAGATTTACCTCCGTGGAAAGGATGATTCATTCGGATCGACATGAGAGTCCAACTACATTGCATTGCCAGAATCCATGTTGTATATTTGAAAGACCTCCTTGCTTCTCTCATGTTACAATCCTCTTCCCGCCGAGCCCCCTTTCTCCTCGATTCACAGAGACAAAATGGAGGACTGGTGCCAATAGTTCATCACGGAAGAAAGGACTCACTGAGTCGAGATCACGAACTAATACTAATTTAATACTAATAGAATAGAAAAGAATTGTCTTTTCTGTATACTTTCCCCAGTTTCGTTGCTACCGCGGGCTTTACGCAATCAATCGGATCATATAGATATCCCTTCAACACAACATAAGTCATCGAAAGGATCTCGAAAACCCACCAAAGAATGAAAGCCAGAATCTTTCAGAAAATGGATTCCTATTCGAAGGGTGCATAATCGCATGGATAAGCTCACACTAACCAATCAATTTTGGATCCAATTCGGAATTTTCCTTGGGAGGTATCGGGAAGGAATTGCAATGTAATAATATCGATTCATACAAATATAGAAGAAAAGGTTCTCTATTGATTCAAACACTGTACCCATGGGATAGGGATAGAGAAAGAGGAAAAAAACGAAGATTTCACATAGTACTTTTGATCGAAAAATCAATTTGATTTATTTTGTACCTTTTACTCAATGAAAAAATGGGTCAGATTCTACAGGATCAAACCTATGGGACTTAAGGAATGATCGAAGGGAATAAAAAAAAAGATCAATTTGATTTATTTTGTACCTTTTACTCAATGAAAAAATGGGTCAGATTCTACAGGATCAAACCTATGGGACTTAAGGAATGATCGAAGGGAATAAAAAAAGAAAAAAAAAAGAGATGGAAAAATAAGTAAATAAAAATGACGTAGAAGAGCCCAGATTCCAAATGAATGAAAATGTGTTGGTCCCGGTCACTCTTCGGGACGGAATGGGAGAAAGGAGGAGATTCTCGAATGAGGAAAAGGATCCAATGACTTCGAAAGAATTGAACGAGGAGCCGTATGAGGTGAAAATCTCACGTACGGTTCTGTCGAATGGTAGTAAGGGTGACTTATCTATGAACTATTCCATTATCACCCCCAAAAAACCAAATTTTGCCTTACGTAAAGTTGCCAGAGTACGCTTAACCTCGGGATTTGAAATCACTGCTTATATACCTAGTATTGGCCATAATTTACAAGAACATTCTGTAGTCTTAGTAAGAGGGGGAAGGGTTAAGGATTTACCCGGCGTGAGATATCACATTGTTCGAGGAACCTAGATGCTGTCAGAGTAAAGGATCGTCAACAAGGGCGTTCTAGTGCTTTGTAGATTCTTATCCAAGACTTGTATCATTTGATGATGCCATGTTAATCACTAGAAACATGTGAAGTGTATGGCTAACCCAATAACAAAAGTTTCGTAAGGGAACTGGAGCAAGCTACCATGAGACAAACAAAAGATCTTCTTTCTAAAAAGATTCGATTCGGAACTGCTATTATATGTCAAGGTCCAATATTGAAATAATTTCAGAGGTTTTCCTTGACCTCGTCCGTGTTAACAAACAATTTGAAATGCCTCGACTTTTTTAGAACAAGTCCAAGTCAAATAGTAATGATTCGAAGCACCTCTTTTTACACTATTTTGGAAACCCAAGGACTCAATCGTATGGATATGTAAAATACAGGATTTCCAATCCTAGCAGGAAAGGTAGGGAAACGGATACTCAATTTAAAGTGAGTAAACAGAATTCCATACTTGATCTCATAGATACATATAGAATTCTTTGGAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCATATCTTTCGAGATCCACCCTACAATATAGTGTCAAAAAGCCAAAATAAATGATTTTAGCCCTTATAAAAAGAAAACTTATTCTTGAACCCCTTTCACGCTCATGTCATGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACACGGAAAAAAATCATTAGCTTATCAAATTATCTATCGAGCCATGAAAAAGATTCAACAAAAGACAGAAGCAAATCCACTATTTGTTTTACGTCAAGCAATACATGGAGTAACTCCTGATATAGTAGTAAAGGTAAGACGTGTAGACGGATCAACTCATCAAGTTCCCATTGAAATAGGATCGACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCAAAAACATCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATATGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCATTAATCCATGAACAGGATCTATAAAGACACATAGGCCCATGGATCCATACATCTCCATCGAAAAAGAATCAATAGAAAAAGAAAGAATCGGAATTGATCGATATATTTCTTGAAACAAACGAAAAGGAAACGAAACGAAAGACGAAACATAAATCAATGATCAACTAAGCTAAGCCCTCTCGAGGACTTGCTTAAGAATAAGAAAGAGGAATCTCATGTAAATACCATGGAATAAGGTTTGATCCTATTCATGGGGATTCCGTAAATATTCCATTCCAAAAAGAGAAAGTTCGAAACAAGTGAGATTTTTTTCGAGATTGGATGCAGTTACTAATTCATGATCTGGCATGTATAGAATGAAAACTTCATTCTCGATTCTACGAGAATTTTTATTAAAGCTTTTCATTTGCTTCTCTTCGATGGAAGTTTTATTTTCCCAGAATATATCCTAATTTTTGGCCTAATTCTTCTTCTGATGATCGATTCAACCTCTGATAAAAAAGATATACCTTGGTTATATTTCATCTCTTCAAGAAGTTTAGTAATGAGCATAACGACCCTATTGTTCCGATGGAGAGAAGAACCTATGATTAGCTTTTCGGGAAATTTCCAAACGAACAATTTCAACGAAATCTTTCAATTTCTTATTTTACTATGTTCAACTCTATGTATTCCTCTATCTGTAGAGTACATTGAATGTACAGAAATGGCTATAACAGAGTTTCAGTTATTCGTATTAACAGCTACTCTAGGAGGAATGTTTTTATGCAGTGCTAATGATTTAATAACTATCTTTGTAGCTCCAGAATGTTTTAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAGTGAGGCTACTACGAAATATTTACTCATGGGTGGGGCAAGTTCTTCTATTCTGGTTTATGGTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATTGAGCTTCAAGAAATAGTAAATGGTATTCTCAATACACAAATGTATAACTCCCCAGGAATTTCAATCGCGCTTATATTCATCATTGTAGGAATTGGGTTCAAGCTTTCCCCAGCCCCTTCTCATCAATGGACTCCTGACGTATACGAAGGAGTGTGGTTTGTTCGATAAATTCCTACCTCTCTATCTATCTCTGAGATGTTTGGATTTTTCAAAACTTCATGTACATGCAGAAGAGAAATACTATCCCCACTCGGACCAAGACATAACTTTTACTTGTTCAAATAACAATTAAGGTGAAGCAGGGTCAGGAACAACGAATCTCTTTATGATAAACAGATTCATTTTGCAAGTTTGCTATTACAGGTAGTTCCTACAAAGGATCGGACTAATAACGTATACAATACTTGAATTCTCGATGTAGATGCTACATAGTTGGTTCTCATCCTTCAAAGACTATGAGTGTAATAGGAGCATCCGTCGACAAAAGGATCACCCTAAGATGATCATCACATGGCTATTGAGAACGAATCAAATCAGATGGTTCTATTTCTCAATCTTTCTGACTTGCTCCTACGGAACTAAGGTCGAAAAGATTGAGAAAAATCAGTCAGTCACAACCACTGATGAAGGATTCCTCGAAAAGTTAAGGATTAGTAATCCATTTTAGAAATTGAATGGATTCGGTCTTATACATAAGCGAGGAAGGTAATCAAAAAAGGAAAGAAGATGAGTTCTTCTTTCTTTTATCACTTAGCTTAGGAGCCGTGCGAGATGAAAGTCTCATGCACAGTTTTGAATGAGAGAAAGAAGTGAGGAATCCTCTTTTCGATTCTGACTCTCCCATTCCAGTCGTTGCTTTTCTTTCTGTTACTTTAAAAGTAGCTGCTAGCTTCAGCCACTCGAATTTTTGATTCCTTTTTATTTCTCATCAAACGAATGACATCTTCTTTTGGAAATCCTAGCTATTCTTAGCATGATATTGGGGAATCTCATTGCTATTACTCAAACAAGCATGAAATGTATGCTTGCGTATTCGTCCATTGGTCAAATCGGATATGTAATTATTGGAATAATTGTTAGAGACTCAAATGGTGGATATGCAAGCGTGATAACTTATATGCTATTCTATATCGCCATGAATCTAGGAACTTTTGCTCGCATTGTATCATTTGGTCTACGTACCAGAACTGATAGCATTTGAGATTATGCAGGATTATACACAAAAGATCCTCTTTTGGCTCTCTCTTTAGCCCTTTGTCTCTTATCCTTAGGAGGTCTTCCTCCACTAGCAGGTTTTTTCGGAAAACTTCATTTATTCTGGTGTGGATGGCAGGCAGGCCTATATTTCTTGGTTTCAATAGGACTCCTTACGAGCGTTGTTTCTATCTACTATATCTAA

mRNA sequence

CCGACATTCTCGCTTCTGCTTTGTCCACCACTGGTCGCGCAGGTGCTTCCCTCTAAGGCGAAACGCTCCCCTACCGATGCATTTTTACATCCCACAGCTTCAGCAGATCGCTTAGCCCCAGTACGCTTAACCTCGGGATTTGAAATCACTGCTTATATACCTAAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACACGGAAAAAAATCATTAGCTTATCAAATTATCTATCGAGCCATGAAAAAGATTCAACAAAAGACAGAAGCAAATCCACTATTTGTTTTACGTCAAGCAATACATGGAGTAACTCCTGATATAGTAGTAAAGGTAAGACGTGTAGACGGATCAACTCATCAAGTTCCCATTGAAATAGGATCGACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCAAAAACATCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATATTAATGAGCATAACGACCCTATTGTTCCGATGGAGAGAAGAACCTATGATTAGCTTTTCGGGAAATTTCCAAACGAACAATTTCAACGAAATCTTTCAATTTCTTATTTTACTATGTTCAACTCTATGTATTCCTCTATCTGTAGAGTACATTGAATGTACAGAAATGGCTATAACAGAGTTTCAGTTATTCGTATTAACAGCTACTCTAGGAGGAATGTTTTTATGCAGTGCTAATGATTTAATAACTATCTTTGTAGCTCCAGAATGTTTTAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAGTGAGGCTACTACGAAATATTTACTCATGGGTGGGGCAAGTTCTTCTATTCTGGTTTATGGTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATTGAGCTTCAAGAAATAGTAAATGCTATTCTTAGCATGATATTGGGGAATCTCATTGCTATTACTCAAACAAGCATGAAATGTATGCTTGCGTATTCGTCCATTGGTCAAATCGGATATGTAATTATTGGAATAATTGTTAGAGACTCAAATGGTGGATATGCAAGCGTGATAACTTATATGCTATTCTATATCGCCATGAATCTAGGAACTTTTGCTCGCATTGTATCATTTGGTCTACGATTATACACAAAAGATCCTCTTTTGGCTCTCTCTTTAGCCCTTTGTCTCTTATCCTTAGGAGGTCTTCCTCCACTAGCAGGTTTTTTCGGAAAACTTCATTTATTCTGGTGTGGATGGCAGGCAGGCCTATATTTCTTGGTTTCAATAGGACTCCTTACGAGCGTTGTTTCTATCTACTATATCTAA

Coding sequence (CDS)

CCGACATTCTCGCTTCTGCTTTGTCCACCACTGGTCGCGCAGGTGCTTCCCTCTAAGGCGAAACGCTCCCCTACCGATGCATTTTTACATCCCACAGCTTCAGCAGATCGCTTAGCCCCAGTACGCTTAACCTCGGGATTTGAAATCACTGCTTATATACCTAAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACACGGAAAAAAATCATTAGCTTATCAAATTATCTATCGAGCCATGAAAAAGATTCAACAAAAGACAGAAGCAAATCCACTATTTGTTTTACGTCAAGCAATACATGGAGTAACTCCTGATATAGTAGTAAAGGTAAGACGTGTAGACGGATCAACTCATCAAGTTCCCATTGAAATAGGATCGACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCAAAAACATCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATATTAATGAGCATAACGACCCTATTGTTCCGATGGAGAGAAGAACCTATGATTAGCTTTTCGGGAAATTTCCAAACGAACAATTTCAACGAAATCTTTCAATTTCTTATTTTACTATGTTCAACTCTATGTATTCCTCTATCTGTAGAGTACATTGAATGTACAGAAATGGCTATAACAGAGTTTCAGTTATTCGTATTAACAGCTACTCTAGGAGGAATGTTTTTATGCAGTGCTAATGATTTAATAACTATCTTTGTAGCTCCAGAATGTTTTAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAGTGAGGCTACTACGAAATATTTACTCATGGGTGGGGCAAGTTCTTCTATTCTGGTTTATGGTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATTGAGCTTCAAGAAATAGTAAATGCTATTCTTAGCATGATATTGGGGAATCTCATTGCTATTACTCAAACAAGCATGAAATGTATGCTTGCGTATTCGTCCATTGGTCAAATCGGATATGTAATTATTGGAATAATTGTTAGAGACTCAAATGGTGGATATGCAAGCGTGATAACTTATATGCTATTCTATATCGCCATGAATCTAGGAACTTTTGCTCGCATTGTATCATTTGGTCTACGATTATACACAAAAGATCCTCTTTTGGCTCTCTCTTTAGCCCTTTGTCTCTTATCCTTAGGAGGTCTTCCTCCACTAGCAGGTTTTTTCGGAAAACTTCATTTATTCTGGTGTGGATGGCAGGCAGGCCTATATTTCTTGGTTTCAATAGGACTCCTTACGAGCGTTGTTTCTATCTACTATATCTAA

Protein sequence

PTFSLLLCPPLVAQVLPSKAKRSPTDAFLHPTASADRLAPVRLTSGFEITAYIPKEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTEANPLFVLRQAIHGVTPDIVVKVRRVDGSTHQVPIEIGSTQGKALAIRWLLGASQKHPGRNMAFKLSSELVDAAKGSGDAILMSITTLLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFQLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSSEATTKYLLMGGASSSILVYGFSWLYGSSGGEIELQEIVNAILSMILGNLIAITQTSMKCMLAYSSIGQIGYVIIGIIVRDSNGGYASVITYMLFYIAMNLGTFARIVSFGLRLYTKDPLLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVVSIYYI

Homology

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BLAST of CcUC04G062620 vs. NCBI nr
Match: RWR98290.1 (NADPH-quinone oxidoreductase subunit 2 [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 648.3 bits (1671), Expect = 5.1e-182
Identity = 382/576 (66.32%), Postives = 391/576 (67.88%), Query Frame = 0


Query: 55  KEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTEANPLFVLRQAIH 114
           +EK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIY+A+KKIQQKTE NPL VLRQAI 
Sbjct: 8   EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYQAVKKIQQKTETNPLSVLRQAIR 67

Query: 115 GVTPDIVVKVRRVDGSTHQVPIEIGSTQGKALAIRWLLGASQKHPGRNMAFKLSSELVDA 174
           GVTPDI VK RRV GSTHQVPIEI STQGKALAIRWLLGAS+K PGRNMAFKLSSELVDA
Sbjct: 68  GVTPDIAVKARRVGGSTHQVPIEIESTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDA 127

Query: 175 AKGSGDAI-------------------LMSITTLLFRWREEPMISFSGNFQTNNFNEIFQ 234
           AKGSGDAI                   LMSIT LLFRWREEPMISFSGNFQTNNFNEIFQ
Sbjct: 128 AKGSGDAIRKKEETHRMAEANRAFAHFLMSITALLFRWREEPMISFSGNFQTNNFNEIFQ 187

Query: 235 FLILLCSTLCIPLSVEYIECTEMAITEFQLFVLTATLGGMFLCSANDLITIFVAPECFSL 294
           FLILLCSTLCIPLSVEYIECTEMAITEF LFVLTATLGGMFLC ANDLITIFVAPE FSL
Sbjct: 188 FLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPESFSL 247

Query: 295 CSYLLSGYTKKDVRSSEATTKYLLMGGASSSILVYGFSWLYGSSGGEIELQEIVN----- 354
           CSYLLSGYTK+DVRS+EATTKYLLMGGASSSILV+GFSWLYGSSGGEIELQEIVN     
Sbjct: 248 CSYLLSGYTKRDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINT 307

Query: 355 ------------------------------------------------------------ 414
                                                                       
Sbjct: 308 QMYNSPGISIALISITVGIGFKLSPAPSHQWTPDVYEGVRFVRQIPTSISISEMFGFFKT 367

Query: 415 ------------------------------------------------------------ 464
                                                                       
Sbjct: 368 PWTCRREMLSPLGPRHNFYQKNPLFDSDSPTPVVAFLSVTSKVAASASATRIFDIPFYFS 427

[Close]

BLAST of CcUC04G062620 vs. NCBI nr
Match: RDY14313.1 (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic, partial [Mucuna pruriens])

HSP 1 Score: 639.4 bits (1648), Expect = 2.4e-179
Identity = 377/583 (64.67%), Postives = 387/583 (66.38%), Query Frame = 0


Query: 53  IPKEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTEANPLFVLRQA 112
           I KEK AKSDPIYRNRLVNML NRILKHGKKSLAYQIIYRAMKKIQQKTE NPL VLRQA
Sbjct: 243 ISKEKTAKSDPIYRNRLVNMLANRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQA 302

Query: 113 IHGVTPDIVVKVRRVDGSTHQVPIEIGSTQGKALAIRWLLGASQKHPGRNMAFKLSSEL- 172
           I GVTPDI VK RRV GSTHQVPIEIGSTQGKALAIRWLLGAS+K PGRNMAFKLSSEL 
Sbjct: 303 IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELN 362

Query: 173 ----------------------------------------VDAAKGSGD----------A 232
                                                   +D+     D          +
Sbjct: 363 ENFILDSTRIFMKAFHLPLFDGSFIFPECILIFGLILLLMIDSTSDQKDISWFYFISSTS 422

Query: 233 ILMSITTLLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAIT 292
           ++MSIT LLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAIT
Sbjct: 423 LVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAIT 482

Query: 293 EFQLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSSEATTKYLLMG 352
           EF LFVLTATLGGMFLC ANDLITIFVA ECFSLCSYLLSGYTKKDVRS+EATTKYLLMG
Sbjct: 483 EFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKKDVRSNEATTKYLLMG 542

Query: 353 GASSSILVYGFSWLYGSSGGEIELQEIVN------------------------------- 412
           GASSSILV+GFSWLYGSSGGEIELQEIVN                               
Sbjct: 543 GASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGILIALIFITVGIGFKLSPA 602

Query: 413 ------------------------------------------------------------ 464
                                                                       
Sbjct: 603 PSHQWTPDVYEGVRCYIVGSHPSETTKVRNPLFDSDSPTPVVAFLSVTSKVAASASATRI 662

[Close]

BLAST of CcUC04G062620 vs. NCBI nr
Match: XP_038696004.1 (LOW QUALITY PROTEIN: NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic-like [Tripterygium wilfordii])

HSP 1 Score: 634.8 bits (1636), Expect = 5.8e-178
Identity = 384/641 (59.91%), Postives = 392/641 (61.15%), Query Frame = 0


Query: 55  KEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTEANPLFVLRQAIH 114
           +EK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQI+YRAMKKIQQKTE NPL VLRQAI 
Sbjct: 8   EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQILYRAMKKIQQKTETNPLSVLRQAIR 67

Query: 115 GVTPDIVVKVRRVDGSTHQVPIEIGSTQGKALAIRWLLGASQKHPGRNMAFKLSSELVDA 174
           GVTPDI VK RRV GSTHQVPIEIGSTQGKALAIRWLLGAS+K PGRNMAFKLSSELVDA
Sbjct: 68  GVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDA 127

Query: 175 AKGSGDAI---------------------------------------------------- 234
           AKGSGDAI                                                    
Sbjct: 128 AKGSGDAIRKKEETHRMAEANRAFNENFILDSTRIFMKAFHLLLFDGSLIFPECILIFGL 187

Query: 235 --------------------------LMSITTLLFRWREEPMISFSGNFQTNNFNEIFQF 294
                                     +MSIT LLFRWREEPMISFSGNFQTNNFNEIFQF
Sbjct: 188 ILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQF 247

Query: 295 LILLCSTLCIPLSVEYIECTEMAITEFQLFVLTATLGGMFLCSANDLITIFVAPECFSLC 354
           LILLCSTLCIPLSVEYIECTEMAITEF LFVLTATLGGMFLC ANDLITIFVAPECFSLC
Sbjct: 248 LILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLC 307

Query: 355 SYLLSGYTKKDVRSSEATTKYLLMGGASSSILVYGFSWLYGSSGGEIELQEIVN------ 414
           SYLLSGYTKKDVRS+EAT KYLLMGGASSSILV+GFSWLYGSSGGEIELQEIVN      
Sbjct: 308 SYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQ 367

Query: 415 ------------------------------------------------------------ 464
                                                                       
Sbjct: 368 MYNSPGISIALIFITVGIGFKLSLVPSHQWTPDVYEGVRFVRXIPTSLSISEMFGFFKTP 427

[Close]

BLAST of CcUC04G062620 vs. NCBI nr
Match: AES69829.1 (NAD(P)H-quinone oxidoreductase subunit 2 [Medicago truncatula])

HSP 1 Score: 615.1 bits (1585), Expect = 4.8e-172
Identity = 387/714 (54.20%), Postives = 408/714 (57.14%), Query Frame = 0


Query: 31  PTASADRLAPVRLTSGFEITAYIP------------------------------------ 90
           P ++  ++A VRLTSGFEITAYIP                                    
Sbjct: 94  PNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDA 153

Query: 91  -----------KEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTEA 150
                      ++K AKSDPIYRNRLVNMLVNRI+KHGKKSLAYQIIYRAMK+IQQKT+ 
Sbjct: 154 VGVKDRQQGTAEKKTAKSDPIYRNRLVNMLVNRIMKHGKKSLAYQIIYRAMKRIQQKTKT 213

Query: 151 NPLFVLRQAIHGVTPDIVV--KVRRVDGSTHQVPIEIGSTQGKALAIRWLLGASQKHPGR 210
           NPL+VLRQAI GVTPDI V  K RRV GS  +VP+EIGSTQGKALAIRWLLGAS+K PGR
Sbjct: 214 NPLYVLRQAIRGVTPDIAVKTKTRRVSGSNKKVPVEIGSTQGKALAIRWLLGASRKRPGR 273

Query: 211 NMAFKLSSELVDAAKGSGDAI--------------------------------------- 270
           NMAFKLSSELVDAAKGSGDAI                                       
Sbjct: 274 NMAFKLSSELVDAAKGSGDAIRKKQETHRMAEANRAFNENLILESTRIFMKAFHLLVFDG 333

Query: 271 ---------------------------------------LMSITTLLFRWREEPMISFSG 330
                                                  +MSIT LLFRWREEPMISFSG
Sbjct: 334 SFIFPELILIFGLILLLMIDSTSDQKDLSWFYFISSTSLVMSITALLFRWREEPMISFSG 393

Query: 331 NFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFQLFVLTATLGGMFLCSANDL 390
           NFQTNNFNEIFQFLILL STLCIPLSVEYIECTEMAITEF LF+LTATLGGMFLCSANDL
Sbjct: 394 NFQTNNFNEIFQFLILLSSTLCIPLSVEYIECTEMAITEFLLFILTATLGGMFLCSANDL 453

Query: 391 ITIFVAPECFSLCSYLLSGYTKKDVRSSEATTKYLLMGGASSSILVYGFSWLYGSSGGEI 450
           ITIFVA ECFSLCSYLLSGYTKKDVRS+EAT KYLLMGGASSSILV+GFSWLYG SGGEI
Sbjct: 454 ITIFVALECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGLSGGEI 513

Query: 451 ELQEIVN----------------------------------------------------- 464
           ELQEIVN                                                     
Sbjct: 514 ELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGVRFVREIPTS 573

[Close]

BLAST of CcUC04G062620 vs. NCBI nr
Match: RYR47793.1 (hypothetical protein Ahy_A07g033759 [Arachis hypogaea])

HSP 1 Score: 528.5 bits (1360), Expect = 5.9e-146
Identity = 336/610 (55.08%), Postives = 347/610 (56.89%), Query Frame = 0


Query: 55  KEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTEANPLFVLRQAIH 114
           +EK  KSDPIYRNRLVN+LVNRILKHGKKSLAYQIIYRAMKKIQQK E NPL VLRQAIH
Sbjct: 8   EEKTTKSDPIYRNRLVNILVNRILKHGKKSLAYQIIYRAMKKIQQKIETNPLSVLRQAIH 67

Query: 115 GVTPDIVVKVRRVDGSTHQVPIEIGSTQGKALAIRWLLGASQKHPGRNMAFKLSSELVDA 174
           GVTPDI VK RR   STHQV IEIGSTQGKALAI WLLGAS+K PG+NMAFKLSSELVDA
Sbjct: 68  GVTPDIAVKARR--RSTHQVLIEIGSTQGKALAICWLLGASRKRPGQNMAFKLSSELVDA 127

Query: 175 AKGSGDAI---------------------------------------------------- 234
           AKGSGDAI                                                    
Sbjct: 128 AKGSGDAIRKKEETPFHLLLFDGSLIFPECILIFGLILLLMINSTSDQKDLSWFYLISST 187

Query: 235 --LMSITTLLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAI 294
             +MSIT LLFRW EEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMA+
Sbjct: 188 SLVMSITALLFRWGEEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAL 247

Query: 295 TEFQLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSSEATTKYLLM 354
            EF LFVLTATLGGMFLC  NDLITIFVAPECFSLC YLLSGYTKKDV S+EATTKYL M
Sbjct: 248 AEFLLFVLTATLGGMFLCGVNDLITIFVAPECFSLCYYLLSGYTKKDVWSNEATTKYLFM 307

Query: 355 GGASSSILVYGFSWLYGSSGGEIELQEIVN------------------------------ 414
           GGASSSILV+GFSWLYGSSGGEIELQEIVN                              
Sbjct: 308 GGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSP 367

Query: 415 ------------------------------------------------------------ 430
                                                                       
Sbjct: 368 AHSHQWTPDVYEGVQFQVIKIEKNRSFTTTDEGFLEKLRINIVILLKILNRMDSVLYIRE 427

[Close]

BLAST of CcUC04G062620 vs. ExPASy Swiss-Prot
Match: P0CC50 (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhB1 PE=3 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 7.0e-134
Identity = 273/383 (71.28%), Postives = 279/383 (72.85%), Query Frame = 0


Query: 178 SGDAILMSITTLLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE 237
           S  +++MSIT LLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE
Sbjct: 64  SSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE 123

Query: 238 MAITEFQLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSSEATTKY 297
           MAITEF LFVLTATLGGMFLC ANDLITIFVAPECFSLCSYLLSGYTKKDVRS+EATTKY
Sbjct: 124 MAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKY 183

Query: 298 LLMGGASSSILVYGFSWLYGSSGGEIELQEIVN--------------------------- 357
           LLMGGASSSILV+GFSWLYGSSGGEIELQEIVN                           
Sbjct: 184 LLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISIALIFITVGIGFK 243

Query: 358 -----------------------------------------------------------A 417
                                                                      A
Sbjct: 244 LSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILA 303

Query: 418 ILSMILGNLIAITQTSMKCMLAYSSIGQIGYVIIGIIVRDSNGGYASVITYMLFYIAMNL 464
           ILSMILGNLIAITQTSMK MLAYSSIGQIGYVIIGIIV DSNGGYAS+ITYMLFYIAMNL
Sbjct: 304 ILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYIAMNL 363

[Close]

BLAST of CcUC04G062620 vs. ExPASy Swiss-Prot
Match: P0CC51 (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhB2 PE=3 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 7.0e-134
Identity = 273/383 (71.28%), Postives = 279/383 (72.85%), Query Frame = 0


Query: 178 SGDAILMSITTLLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE 237
           S  +++MSIT LLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE
Sbjct: 64  SSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE 123

Query: 238 MAITEFQLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSSEATTKY 297
           MAITEF LFVLTATLGGMFLC ANDLITIFVAPECFSLCSYLLSGYTKKDVRS+EATTKY
Sbjct: 124 MAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKY 183

Query: 298 LLMGGASSSILVYGFSWLYGSSGGEIELQEIVN--------------------------- 357
           LLMGGASSSILV+GFSWLYGSSGGEIELQEIVN                           
Sbjct: 184 LLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISIALIFITVGIGFK 243

Query: 358 -----------------------------------------------------------A 417
                                                                      A
Sbjct: 244 LSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILA 303

Query: 418 ILSMILGNLIAITQTSMKCMLAYSSIGQIGYVIIGIIVRDSNGGYASVITYMLFYIAMNL 464
           ILSMILGNLIAITQTSMK MLAYSSIGQIGYVIIGIIV DSNGGYAS+ITYMLFYIAMNL
Sbjct: 304 ILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYIAMNL 363

[Close]

BLAST of CcUC04G062620 vs. ExPASy Swiss-Prot
Match: P0CD56 (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhB1 PE=3 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 3.8e-132
Identity = 270/383 (70.50%), Postives = 277/383 (72.32%), Query Frame = 0


Query: 178 SGDAILMSITTLLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE 237
           S  +++MSIT LLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE
Sbjct: 64  SSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE 123

Query: 238 MAITEFQLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSSEATTKY 297
           MAITEF LFVLTATLGGMFLC ANDLITIFVAPECFSLCSYLLSGYTKKDVRS+EATTKY
Sbjct: 124 MAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKY 183

Query: 298 LLMGGASSSILVYGFSWLYGSSGGEIELQEIVN--------------------------- 357
           LLMGGASSSILV+GFSWLYGSSGGEIELQEIVN                           
Sbjct: 184 LLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFK 243

Query: 358 -----------------------------------------------------------A 417
                                                                      A
Sbjct: 244 LSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILA 303

Query: 418 ILSMILGNLIAITQTSMKCMLAYSSIGQIGYVIIGIIVRDSNGGYASVITYMLFYIAMNL 464
           ILSMILGNLIAITQTSMK MLAYSSIGQIGYVIIGIIV DSNGGYAS+ITYMLFYI+MNL
Sbjct: 304 ILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMNL 363

[Close]

BLAST of CcUC04G062620 vs. ExPASy Swiss-Prot
Match: P0CD57 (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhB2 PE=3 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 3.8e-132
Identity = 270/383 (70.50%), Postives = 277/383 (72.32%), Query Frame = 0


Query: 178 SGDAILMSITTLLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE 237
           S  +++MSIT LLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE
Sbjct: 64  SSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE 123

Query: 238 MAITEFQLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSSEATTKY 297
           MAITEF LFVLTATLGGMFLC ANDLITIFVAPECFSLCSYLLSGYTKKDVRS+EATTKY
Sbjct: 124 MAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKY 183

Query: 298 LLMGGASSSILVYGFSWLYGSSGGEIELQEIVN--------------------------- 357
           LLMGGASSSILV+GFSWLYGSSGGEIELQEIVN                           
Sbjct: 184 LLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFK 243

Query: 358 -----------------------------------------------------------A 417
                                                                      A
Sbjct: 244 LSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILA 303

Query: 418 ILSMILGNLIAITQTSMKCMLAYSSIGQIGYVIIGIIVRDSNGGYASVITYMLFYIAMNL 464
           ILSMILGNLIAITQTSMK MLAYSSIGQIGYVIIGIIV DSNGGYAS+ITYMLFYI+MNL
Sbjct: 304 ILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMNL 363

[Close]

BLAST of CcUC04G062620 vs. ExPASy Swiss-Prot
Match: P0CC40 (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Carica papaya OX=3649 GN=ndhB1 PE=3 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 1.1e-131
Identity = 268/383 (69.97%), Postives = 277/383 (72.32%), Query Frame = 0


Query: 178 SGDAILMSITTLLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE 237
           S  +++MSIT LLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE
Sbjct: 64  SSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE 123

Query: 238 MAITEFQLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSSEATTKY 297
           MAITEF LF+LTATLGGMFLC ANDLITIFVAPECFSLCSYLLSGYTKKDVRS+EATTKY
Sbjct: 124 MAITEFLLFILTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKY 183

Query: 298 LLMGGASSSILVYGFSWLYGSSGGEIELQEIVN--------------------------- 357
           LLMGGASSSILV+GFSWLYGSSGGEIELQEIVN                           
Sbjct: 184 LLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFK 243

Query: 358 -----------------------------------------------------------A 417
                                                                      A
Sbjct: 244 LSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILA 303

Query: 418 ILSMILGNLIAITQTSMKCMLAYSSIGQIGYVIIGIIVRDSNGGYASVITYMLFYIAMNL 464
           ILSMILGNLIAITQTSMK MLAYSSIGQIGYVIIGIIV DSNGGYAS+ITYMLFYI+MNL
Sbjct: 304 ILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMNL 363

[Close]

BLAST of CcUC04G062620 vs. ExPASy TrEMBL
Match: A0A3S3RBG4 (Ribosomal protein S7 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02782000 PE=3 SV=1)

HSP 1 Score: 648.3 bits (1671), Expect = 2.5e-182
Identity = 382/576 (66.32%), Postives = 391/576 (67.88%), Query Frame = 0


Query: 55  KEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTEANPLFVLRQAIH 114
           +EK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIY+A+KKIQQKTE NPL VLRQAI 
Sbjct: 8   EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYQAVKKIQQKTETNPLSVLRQAIR 67

Query: 115 GVTPDIVVKVRRVDGSTHQVPIEIGSTQGKALAIRWLLGASQKHPGRNMAFKLSSELVDA 174
           GVTPDI VK RRV GSTHQVPIEI STQGKALAIRWLLGAS+K PGRNMAFKLSSELVDA
Sbjct: 68  GVTPDIAVKARRVGGSTHQVPIEIESTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDA 127

Query: 175 AKGSGDAI-------------------LMSITTLLFRWREEPMISFSGNFQTNNFNEIFQ 234
           AKGSGDAI                   LMSIT LLFRWREEPMISFSGNFQTNNFNEIFQ
Sbjct: 128 AKGSGDAIRKKEETHRMAEANRAFAHFLMSITALLFRWREEPMISFSGNFQTNNFNEIFQ 187

Query: 235 FLILLCSTLCIPLSVEYIECTEMAITEFQLFVLTATLGGMFLCSANDLITIFVAPECFSL 294
           FLILLCSTLCIPLSVEYIECTEMAITEF LFVLTATLGGMFLC ANDLITIFVAPE FSL
Sbjct: 188 FLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPESFSL 247

Query: 295 CSYLLSGYTKKDVRSSEATTKYLLMGGASSSILVYGFSWLYGSSGGEIELQEIVN----- 354
           CSYLLSGYTK+DVRS+EATTKYLLMGGASSSILV+GFSWLYGSSGGEIELQEIVN     
Sbjct: 248 CSYLLSGYTKRDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINT 307

Query: 355 ------------------------------------------------------------ 414
                                                                       
Sbjct: 308 QMYNSPGISIALISITVGIGFKLSPAPSHQWTPDVYEGVRFVRQIPTSISISEMFGFFKT 367

Query: 415 ------------------------------------------------------------ 464
                                                                       
Sbjct: 368 PWTCRREMLSPLGPRHNFYQKNPLFDSDSPTPVVAFLSVTSKVAASASATRIFDIPFYFS 427

[Close]

BLAST of CcUC04G062620 vs. ExPASy TrEMBL
Match: A0A371IH37 (Ribosomal protein S7 (Fragment) OS=Mucuna pruriens OX=157652 GN=ndhB2 PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 1.1e-179
Identity = 377/583 (64.67%), Postives = 387/583 (66.38%), Query Frame = 0


Query: 53  IPKEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTEANPLFVLRQA 112
           I KEK AKSDPIYRNRLVNML NRILKHGKKSLAYQIIYRAMKKIQQKTE NPL VLRQA
Sbjct: 243 ISKEKTAKSDPIYRNRLVNMLANRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQA 302

Query: 113 IHGVTPDIVVKVRRVDGSTHQVPIEIGSTQGKALAIRWLLGASQKHPGRNMAFKLSSEL- 172
           I GVTPDI VK RRV GSTHQVPIEIGSTQGKALAIRWLLGAS+K PGRNMAFKLSSEL 
Sbjct: 303 IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELN 362

Query: 173 ----------------------------------------VDAAKGSGD----------A 232
                                                   +D+     D          +
Sbjct: 363 ENFILDSTRIFMKAFHLPLFDGSFIFPECILIFGLILLLMIDSTSDQKDISWFYFISSTS 422

Query: 233 ILMSITTLLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAIT 292
           ++MSIT LLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAIT
Sbjct: 423 LVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAIT 482

Query: 293 EFQLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSSEATTKYLLMG 352
           EF LFVLTATLGGMFLC ANDLITIFVA ECFSLCSYLLSGYTKKDVRS+EATTKYLLMG
Sbjct: 483 EFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKKDVRSNEATTKYLLMG 542

Query: 353 GASSSILVYGFSWLYGSSGGEIELQEIVN------------------------------- 412
           GASSSILV+GFSWLYGSSGGEIELQEIVN                               
Sbjct: 543 GASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGILIALIFITVGIGFKLSPA 602

Query: 413 ------------------------------------------------------------ 464
                                                                       
Sbjct: 603 PSHQWTPDVYEGVRCYIVGSHPSETTKVRNPLFDSDSPTPVVAFLSVTSKVAASASATRI 662

[Close]

BLAST of CcUC04G062620 vs. ExPASy TrEMBL
Match: A0A445CAC2 (Ribosomal protein S7 OS=Arachis hypogaea OX=3818 GN=Ahy_A07g033759 PE=3 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 2.9e-146
Identity = 336/610 (55.08%), Postives = 347/610 (56.89%), Query Frame = 0


Query: 55  KEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTEANPLFVLRQAIH 114
           +EK  KSDPIYRNRLVN+LVNRILKHGKKSLAYQIIYRAMKKIQQK E NPL VLRQAIH
Sbjct: 8   EEKTTKSDPIYRNRLVNILVNRILKHGKKSLAYQIIYRAMKKIQQKIETNPLSVLRQAIH 67

Query: 115 GVTPDIVVKVRRVDGSTHQVPIEIGSTQGKALAIRWLLGASQKHPGRNMAFKLSSELVDA 174
           GVTPDI VK RR   STHQV IEIGSTQGKALAI WLLGAS+K PG+NMAFKLSSELVDA
Sbjct: 68  GVTPDIAVKARR--RSTHQVLIEIGSTQGKALAICWLLGASRKRPGQNMAFKLSSELVDA 127

Query: 175 AKGSGDAI---------------------------------------------------- 234
           AKGSGDAI                                                    
Sbjct: 128 AKGSGDAIRKKEETPFHLLLFDGSLIFPECILIFGLILLLMINSTSDQKDLSWFYLISST 187

Query: 235 --LMSITTLLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAI 294
             +MSIT LLFRW EEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMA+
Sbjct: 188 SLVMSITALLFRWGEEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAL 247

Query: 295 TEFQLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSSEATTKYLLM 354
            EF LFVLTATLGGMFLC  NDLITIFVAPECFSLC YLLSGYTKKDV S+EATTKYL M
Sbjct: 248 AEFLLFVLTATLGGMFLCGVNDLITIFVAPECFSLCYYLLSGYTKKDVWSNEATTKYLFM 307

Query: 355 GGASSSILVYGFSWLYGSSGGEIELQEIVN------------------------------ 414
           GGASSSILV+GFSWLYGSSGGEIELQEIVN                              
Sbjct: 308 GGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSP 367

Query: 415 ------------------------------------------------------------ 430
                                                                       
Sbjct: 368 AHSHQWTPDVYEGVQFQVIKIEKNRSFTTTDEGFLEKLRINIVILLKILNRMDSVLYIRE 427

[Close]

BLAST of CcUC04G062620 vs. ExPASy TrEMBL
Match: A0A6N0GSG6 (NdhB OS=Sophora flavescens OX=49840 GN=ndhB PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 3.6e-133
Identity = 266/341 (78.01%), Postives = 276/341 (80.94%), Query Frame = 0


Query: 178 SGDAILMSITTLLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE 237
           S  +++MSIT LLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE
Sbjct: 46  SSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE 105

Query: 238 MAITEFQLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSSEATTKY 297
           MAITEF LFVLTATLGGMFLC ANDLITIFVAPECFSLCSYLLSGYTKKDVRS+EATTKY
Sbjct: 106 MAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKY 165

Query: 298 LLMGGASSSILVYGFSWLYGSSGGEIELQEIVNAILS----------------------- 357
           LLMGGASSSILV+GFSWLYGSSGGEIELQEIVN +++                       
Sbjct: 166 LLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFK 225

Query: 358 ---------------------MILGNLIAITQTSMKCMLAYSSIGQIGYVIIGIIVRDSN 417
                                MILGNLIAITQTSMK MLAYSSIGQIGYVIIGIIV DSN
Sbjct: 226 LSPAPSHQWTPDVYEGVRFVRMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSN 285

Query: 418 GGYASVITYMLFYIAMNLGTFARIVSFGLR-----------LYTKDPLLALSLALCLLSL 464
           GGYAS+ITYMLFYI+MNLGTFA IVSFGLR           LYTKDP LALSLALCLLSL
Sbjct: 286 GGYASMITYMLFYISMNLGTFACIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSL 345

[Close]

BLAST of CcUC04G062620 vs. ExPASy TrEMBL
Match: A0A7U3STX1 (NADH-plastoquinone oxidoreductase subunit 2 OS=Cotinus coggygria OX=269719 GN=ndhB PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.8e-132
Identity = 265/341 (77.71%), Postives = 275/341 (80.65%), Query Frame = 0


Query: 178 SGDAILMSITTLLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE 237
           S  +++MSIT LLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE
Sbjct: 64  SSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTE 123

Query: 238 MAITEFQLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSSEATTKY 297
           MAITEF LFVLTATLGGMFLC ANDLITIFVAPECFSLCSYLLSGYTKKDVRS+EAT KY
Sbjct: 124 MAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKY 183

Query: 298 LLMGGASSSILVYGFSWLYGSSGGEIELQEIVNAILS----------------------- 357
           LLMGGASSSILV+GFSWLYGSSGGEIELQEIVN +++                       
Sbjct: 184 LLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFK 243

Query: 358 ---------------------MILGNLIAITQTSMKCMLAYSSIGQIGYVIIGIIVRDSN 417
                                MILGNLIAITQTSMK MLAYSSIGQIGYVIIGIIV DSN
Sbjct: 244 LSPAPSHQWTPDVYEGVRFVRMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSN 303

Query: 418 GGYASVITYMLFYIAMNLGTFARIVSFGLR-----------LYTKDPLLALSLALCLLSL 464
           GGYAS+ITYMLFYI+MNLGTFA IVSFGLR           LYTKDP LALSLALCLLSL
Sbjct: 304 GGYASMITYMLFYISMNLGTFACIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSL 363

[Close]

BLAST of CcUC04G062620 vs. TAIR 10
Match: ATCG00890.1 (NADH-Ubiquinone/plastoquinone (complex I) protein )

HSP 1 Score: 355.9 bits (912), Expect = 4.9e-98
Identity = 210/323 (65.02%), Postives = 217/323 (67.18%), Query Frame = 0


Query: 238 MAITEFQLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSSEATTKY 297
           MAITEF LF+LTATLGGMFLC ANDLITIFVAPECFSLCSYLLSGYTKKD+RS+EAT KY
Sbjct: 1   MAITEFLLFILTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDIRSNEATMKY 60

Query: 298 LLMGGASSSILVYGFSWLYGSSGGEIELQEIVN--------------------------- 357
           LLMGGASSSILV+GFSWLYGSSGGEIELQEIVN                           
Sbjct: 61  LLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFK 120

Query: 358 -----------------------------------------------------------A 417
                                                                      A
Sbjct: 121 LSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILA 180

Query: 418 ILSMILGNLIAITQTSMKCMLAYSSIGQIGYVIIGIIVRDSNGGYASVITYMLFYIAMNL 464
           ILSMI GNLIAITQTSMK MLAYSSIGQIGYVIIGIIV DSNGGYAS+ITYMLFYIAMNL
Sbjct: 181 ILSMIFGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYIAMNL 240

[Close]

BLAST of CcUC04G062620 vs. TAIR 10
Match: ATCG01250.1 (NADH-Ubiquinone/plastoquinone (complex I) protein )

HSP 1 Score: 355.9 bits (912), Expect = 4.9e-98
Identity = 210/323 (65.02%), Postives = 217/323 (67.18%), Query Frame = 0


Query: 238 MAITEFQLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSSEATTKY 297
           MAITEF LF+LTATLGGMFLC ANDLITIFVAPECFSLCSYLLSGYTKKD+RS+EAT KY
Sbjct: 1   MAITEFLLFILTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDIRSNEATMKY 60

Query: 298 LLMGGASSSILVYGFSWLYGSSGGEIELQEIVN--------------------------- 357
           LLMGGASSSILV+GFSWLYGSSGGEIELQEIVN                           
Sbjct: 61  LLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFK 120

Query: 358 -----------------------------------------------------------A 417
                                                                      A
Sbjct: 121 LSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILA 180

Query: 418 ILSMILGNLIAITQTSMKCMLAYSSIGQIGYVIIGIIVRDSNGGYASVITYMLFYIAMNL 464
           ILSMI GNLIAITQTSMK MLAYSSIGQIGYVIIGIIV DSNGGYAS+ITYMLFYIAMNL
Sbjct: 181 ILSMIFGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYIAMNL 240

[Close]

BLAST of CcUC04G062620 vs. TAIR 10
Match: ATCG01240.1 (ribosomal protein S7 )

HSP 1 Score: 228.8 bits (582), Expect = 9.0e-60
Identity = 117/128 (91.41%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 55  KEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTEANPLFVLRQAIH 114
           +EK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTE NPL VLRQAI 
Sbjct: 8   EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIR 67

Query: 115 GVTPDIVVKVRRVDGSTHQVPIEIGSTQGKALAIRWLLGASQKHPGRNMAFKLSSELVDA 174
           GVTPDI VK RRV GSTHQVPIEIGSTQGKALAIRWLLGAS+K PGRNMAFKLSSELVDA
Sbjct: 68  GVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDA 127

Query: 175 AKGSGDAI 183
           AKGSGDAI
Sbjct: 128 AKGSGDAI 135

[Close]

BLAST of CcUC04G062620 vs. TAIR 10
Match: ATCG00900.1 (Ribosomal protein S7p/S5e family protein )

HSP 1 Score: 228.8 bits (582), Expect = 9.0e-60
Identity = 117/128 (91.41%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 55  KEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTEANPLFVLRQAIH 114
           +EK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTE NPL VLRQAI 
Sbjct: 8   EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIR 67

Query: 115 GVTPDIVVKVRRVDGSTHQVPIEIGSTQGKALAIRWLLGASQKHPGRNMAFKLSSELVDA 174
           GVTPDI VK RRV GSTHQVPIEIGSTQGKALAIRWLLGAS+K PGRNMAFKLSSELVDA
Sbjct: 68  GVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDA 127

Query: 175 AKGSGDAI 183
           AKGSGDAI
Sbjct: 128 AKGSGDAI 135

[Close]

BLAST of CcUC04G062620 vs. TAIR 10
Match: ATMG00285.1 (NADH dehydrogenase 2A )

HSP 1 Score: 100.9 bits (250), Expect = 2.8e-21
Identity = 103/384 (26.82%), Postives = 164/384 (42.71%), Query Frame = 0


Query: 182 ILMSITTLLFRWREEPMIS-----FSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECT 241
           +L  + TLL      P+++     ++  F+ +NF    Q  +LL +   I +  +  +  
Sbjct: 59  LLSVLITLLLLAAGAPLLTIAHLFWNNLFRRDNFTYFCQIFLLLSTAGTISMCFDSSDQE 118

Query: 242 EMAITEFQLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSSEATTK 301
                EF + +   T G +F+ SA+DLI +++A E  SLC Y+++   +K   S+EA +K
Sbjct: 119 RFDAFEFIVLIPLPTRGMLFMISAHDLIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSK 178

Query: 302 YLLMGGASSSILVYGFSWLYGSSGGE---------------------------------- 361
           YL++G  SS IL++G S +YGS+G                                    
Sbjct: 179 YLILGAFSSGILLFGCSMIYGSTGATHFDQLAKILTGYEITGARSSGIFMGILSIAVGFL 238

Query: 362 -------------------------------------------------IELQEI--VNA 421
                                                              LQ+I    +
Sbjct: 239 FKITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISISANILRVSIYGSYGATLQQIFFFCS 298

Query: 422 ILSMILGNLIAITQTSMKCMLAYSSIGQIGYVIIGIIVRDSNGGYASVITYMLFYIAMNL 464
           I SMILG L A+ QT +K  LA+SSIG +GY+  G     +  G  S++  +  Y  M +
Sbjct: 299 IASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSC-GTIEGIQSLLIGIFIYALMTM 358

The following BLAST results are available for this feature:

BLAST of CcUC04G062620 vs. NCBI nr


Match Name	E-value	Identity	Description
RWR98290.1	5.1e-182	66.32	NADPH-quinone oxidoreductase subunit 2 [Cinnamomum micranthum f. kanehirae]	[more]
RDY14313.1	2.4e-179	64.67	NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic, partial [Mucuna pruri...	[more]
XP_038696004.1	5.8e-178	59.91	LOW QUALITY PROTEIN: NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic-l...	[more]
AES69829.1	4.8e-172	54.20	NAD(P)H-quinone oxidoreductase subunit 2 [Medicago truncatula]	[more]
RYR47793.1	5.9e-146	55.08	hypothetical protein Ahy_A07g033759 [Arachis hypogaea]	[more]

BLAST of CcUC04G062620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CC50	7.0e-134	71.28	NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Cucumis sativus OX=...	[more]
P0CC51	7.0e-134	71.28	NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Cucumis sativus OX=...	[more]
P0CD56	3.8e-132	70.50	NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Vitis vinifera OX=2...	[more]
P0CD57	3.8e-132	70.50	NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Vitis vinifera OX=2...	[more]
P0CC40	1.1e-131	69.97	NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Carica papaya OX=36...	[more]

BLAST of CcUC04G062620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A3S3RBG4	2.5e-182	66.32	Ribosomal protein S7 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_027...	[more]
A0A371IH37	1.1e-179	64.67	Ribosomal protein S7 (Fragment) OS=Mucuna pruriens OX=157652 GN=ndhB2 PE=3 SV=1	[more]
A0A445CAC2	2.9e-146	55.08	Ribosomal protein S7 OS=Arachis hypogaea OX=3818 GN=Ahy_A07g033759 PE=3 SV=1	[more]
A0A6N0GSG6	3.6e-133	78.01	NdhB OS=Sophora flavescens OX=49840 GN=ndhB PE=4 SV=1	[more]
A0A7U3STX1	1.8e-132	77.71	NADH-plastoquinone oxidoreductase subunit 2 OS=Cotinus coggygria OX=269719 GN=nd...	[more]

BLAST of CcUC04G062620 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00890.1	4.9e-98	65.02	NADH-Ubiquinone/plastoquinone (complex I) protein	[more]
ATCG01250.1	4.9e-98	65.02	NADH-Ubiquinone/plastoquinone (complex I) protein	[more]
ATCG01240.1	9.0e-60	91.41	ribosomal protein S7	[more]
ATCG00900.1	9.0e-60	91.41	Ribosomal protein S7p/S5e family protein	[more]
ATMG00285.1	2.8e-21	26.82	NADH dehydrogenase 2A	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003917	NADH:ubiquinone oxidoreductase, chain 2	PRINTS	PR01436	NADHDHGNASE2	coord: 356..369 score: 27.19 coord: 332..345 score: 28.35 coord: 413..425 score: 60.31 coord: 445..464 score: 18.67
IPR005717	Ribosomal protein S7, bacterial/organellar-type	TIGRFAM	TIGR01029	TIGR01029	coord: 57..182 e-value: 1.2E-43 score: 146.7
IPR023798	Ribosomal protein S7 domain	PFAM	PF00177	Ribosomal_S7	coord: 57..182 e-value: 6.2E-37 score: 126.5
IPR036823	Ribosomal protein S7 domain superfamily	GENE3D	1.10.455.10	Ribosomal protein S7 domain	coord: 52..185 e-value: 2.4E-39 score: 136.4
IPR036823	Ribosomal protein S7 domain superfamily	SUPERFAMILY	47973	Ribosomal protein S7	coord: 53..182
IPR001750	NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit	PFAM	PF00361	Proton_antipo_M	coord: 330..459 e-value: 1.9E-29 score: 102.8
None	No IPR available	PANTHER	PTHR22773	NADH DEHYDROGENASE	coord: 330..463 coord: 180..331
None	No IPR available	PANTHER	PTHR22773:SF105	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT 2 B, CHLOROPLASTIC	coord: 180..331
None	No IPR available	PANTHER	PTHR22773:SF105	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT 2 B, CHLOROPLASTIC	coord: 330..463
None	No IPR available	CDD	cd14871	uS7_Chloroplast	coord: 57..196 e-value: 6.19828E-70 score: 217.144
IPR020606	Ribosomal protein S7, conserved site	PROSITE	PS00052	RIBOSOMAL_S7	coord: 67..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G062620.1	CcUC04G062620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome