CcUC04G060990 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G060990
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	tRNA-binding domain-containing protein
Location	CicolChr04: 7670553 .. 7686722 (-)
RNA-Seq Expression	CcUC04G060990
Synteny	CcUC04G060990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCAATTACCCCCAACGATGGCTTCTCTACCAACGGCCGCTGCAATTGCCAATGTTACAAAAACTGCCAGCAATCGCCGCTTCTTCTTCTTCTCTTCTTCCCTTGCCCATAACTTCAACCATTGTCGCCCGTTCTTCGCTGTACGTCCAACTTTTTCTAATTTTACCCCACCACTTGGTAAGGATAATGTCGCTACCAGGGGAAGAATCTCCAGAAATGGTGCGCGGTTTCCCTTCTCACTTTGCACTATCGCATCCACCGAGTCTGTCACCAGTGACGCTGCCATTGCATCGTCTTCCACATCATTGGATAAGGACGATGATCAGGAAAAGAAGATTAAGGACGTGGCCGACACGCTCGATATTAGGGTTGGGCGAATCATTAAGGCTTGGAGACATCAGGAGGCTGACTCTCTTTATGTAGAAGAGGTTGACGTTGGTGAACCCGAGCCGAGGCTTATTTGCAGTGGCCTTGTTAAATATATCCCTCTTGATCAACTTCAGGTACTTAAGTTTTCCTTCTTAAAAGAAAAATGTTTGAGGGGACATGGTTCAAAGAGAAACTCTCCCTTATGTTACTGTTATTCTTTTCAATGGCATAACTTGATACCCAGTGTAGAGATTCCCATGTAGTGCCTATTCATTTTTTTTCATGGCTTGTAGATTGATTTCTTTAGCATTTAGTCTCTGTAATTCTCACTTTTAATTTATACCAATTGGAGTCTTTTCTTTTTCCTCCTATCTTGTACGTTGTGTTTTTGATCAATTTCGAGGAGGAAACGGCAGACAGTATGAAATGGAAACCTTAGGAACGAATTCCTTCTTATAGCAAACATCAGATGCCAGTTTTTAGAGAGTGGAAAAGGTAGAGGAAAAATGTAGGACTACTTGGTTTTGTTGAAGGATGTCTCATAGATGAAGGAACTATCTTATGGGTGAATTATTTTGTGTGTGGGTGGAAGAAGCCTCGCGGTGGAACTAAAGTTAAGAGGAAGAATTATTTATTTATTATTTTTCTAGAATCTTTATTGCAAGATGTTGGGATGGCTGCGTGAGCACAATATCTTGTAGTTCAGCATTATCACTACACACTAATAACTAATAAGTATGCTATGGTTGGCAGCTTAGAAATATAAAAGATGGAACTTTGAAATGTTAGGCCTCATATTACCAATGCTTATGTTTGTGTGTTATGCATATTTCGTTACCTCTTGGGCTGTTATTTTGTATTTGGGACTTAGTGATGTAAGAAGAATAGAGGTTGATTGGGTAATTAGGCAATATTCAAGGTTAATTCCCTTTTTACCCCCACTTGTAATAAAACTCTATAAATAAGAATCTTTCCCTCTTGTATGAAACACATTTTATCATCCTAATAAAGGATCCAAAATCTTGATTCTTGGAGGTTTACTCCTTGAGACTACATAGGCTACATCATTTTGGTATCAAAGTGACCATCTGGGCCAATGTTGACAGTCGCTGGTGGAAGTCTGGAAAACTCTTGGTGATGCCGATCACGAGAGGGAGCTTGAGTGTTGTGCTCGTTGCTGAACAACACATATCTAATTAGGGGGAACCCTTGAAATTCCAATAAAGAAAGAAAAAACCAAAGATTCATCAAGATTTTGCAAGAATGGACTATTGTTGATCAAAGAAGTTGTCCAAAAAGAAATACAACAGTTGTTATCGGCAAGAAAATCAAATTTACTCCGAAAACAGTGCTAGAATTCTGACTTAAGTGATTTCGAAGAAGACTTTTAACATCGCTTTTCTCAAAGAACCTATCATTATCCACATTGGGAATTTGATTCTAGTGACTCTGATGATATTTCTAAGGCAGCTTGGGACGGAATAAGAAGGTGACAATATCGAAAAGGGCCAACGATCCAATTAAACCCATTTTTCAAGAAATCAACATAAAGATTGGGAGTTAGATGAATTAAAGAATCATTAAGGATCATCAAAAATGGACTTTTACAAACCAAGAACGTTCAAGACTCAAAATTACTCTTTTGGTTATGAAACACGATCAAGATTGATTCAAGAGAATCAATGGATGAGTACTGTATCCACTATATTCAAGAATCCAACAAAATGACTACTTTGATCCCGTAGCATTGAAGGAAATGAAGAAAACAAGAAAAGAAATCCAACGTTCATTGAGAAAAATAACTCAATATATTGATTAACCATCAATTAATTTGCAAGAGTTCGAGAACGGATTGATTTCATATACCAAAGGAAAAACAAGTGAATCATGGGGGGAAAATTTTCAAATAGAAACTTGAAGATAACATTGAAGAAAAACAAGAATTTGAAGATGTTGATTTGGAAATAGTCTCAAGTGAAGAAGAAAAATCCAACGAAGAAGGTGGAAAAGAGGTATCGAACACTGAGCAAGAATTGACCAAGACATGTCACATTGATTGTGGTGGAAATGAATCACCAAACCGTCAAAGAACTTGAAGCGAATGATAAAGAAGACATGATTCTCGAACGATTCTCTTTGGAAGGTGGTTTTTTAGTAATTGGTCCTTTGAATTAGGAGTGTTCAAAAAACCCGGTAACCCGACCTACTCAGACTACCCAACCCAAACCGTAGGGGTTGGGTTGTGTTAAATTTTATTTTGGGTTAGGTTTGGTTGAGAAATTTTTAATTTTTAATTTTGGGCTGGATCGTGGGTTGGTGATTTTTCCACCCGGGTTAACCCAAACCAACCGACCATATATATGTGTGTGTGTATATATATTTTTTTAACCTAGTAAAGTTTAACCTTTGGGAGACCGAGAGAGTATAGAGGGACAGAGAGAGTGACAGAGGGATAGAGAGAGCTAGAGAGCGAGAGAGAGCGGGAGAGCAAGAGAGAGAGAGAGAGAGCGGGAGAGAGAGTGAGAGAGAGAGAGAGAGGGCGAGATAGAGTGAGAGAGCGGGAGAGAGAGAGCAACCAAGTAACCCAACCCGACCCAACTCGAAAATATAGGGTTGGGTTGACCCTCCAAAATGGAACTGATGGGTTGGAACGTATGCCAACCCGGAATTTCAGGTTGGTCCAAAAAACACCCCTAACCGGGTCCAACCCAACCCGTGTACACCCCTACTTTGAATATGGTTTTGAATGAGCTTGAAGGAAGCATCTTTATTGGGTTTATGGCCAATGTCGAAGTTCATCTTTTGATGGTAATATTGGATTTTTTTTGTCTCGAATGTATCCCTTTAATCATAATATATTTGTTTTATATGTAGGAGGTTGGTTTGGTCATAATCCGTTGAACAAATTTGTTGCATTCCTTGTTTGCTTCATATATTTTTCTGTTTAAAACTCAAGGATGAGTTTTCTTTTTGTAGGGGTAGAATGATGTCAGAAGAATAGGGATTGATTGGGTAATTAGGCAATATTCTAGGTTAATTCCCTTTTTACCCCCACTTGTAATAAAACTCTATAAATCGAAATGTTCCTCTCTTGTATGAAACACATTTTATTATTCTAATAAAAGATTCAAAATCTTGGTTCTTGGAAGATTACTCCTTGAGTGTCACACCCCCTCCCGAATTACCCTCTTAAACACATGAAGAGGCGTGAAGACAACAGACATCACCTTTTGTGACATCTACTGCCCTGTCCTTCACTCCTTTACACACTTTTGCATGCACAACTTAGCAAACAATCTTAGATTAAACGTAAAACTTGAAGATTATTCAAAGCTTTTTTAAATTCAGAACATAATATAAACAATTCCATAGAATCTCAACCCTAAGTATAATATGAAAAGCTTTCCTATGACAAACCTCAACTTTGTTGGCAACGAGAACCCTTTTGATACTTGAAAAGAAAAACATAAAAGAAAAGAATGAGCTACAAAAGCCAGTGAGTGGTTAAACATCTAAACAAAAGGGTAACACACGAATCCTTAATAGTTCATCAACAAAGCAGTATAAAATTAGAATTTCAAATTAACGAGGTTATCTACTCAAACCTCACTTCCAAGGCTTTACCCGGTATTGTTTTCAATTCTGCTGGCACCACTCGATTCAGCTACTCAATTTGCCCCCTATGTGCACATAGACTTACCTTTGAGGGATTAGAAATTAGACTTGTTGACCCTCTGACCATCCTACAAGAGATACTTTCCACAAGATCAGGAATTAGGTTTCCGGTAACCCCCTGACCATCCCGTGAGGTTCTTTCTCCGACACAGGATCAGAAACTAGATCCTTGGATCCTATGACTATCTTGTGCGGCCTTAGCTTCCTTTACCATGCATTAACGTACTCACAACATATAAAGTCCGTAAGGAATTCACAATATTACTGAATAAAGTAAACAAGTAACCACTCACTGTAGATGGAGTTTTATCTTCCGAGTCCTTTTCCTTGCTTTGGATCCTCTTATTCCTTTGAGACCTAGCTTGCTTTTGACACCCAAGGACACAACTAGGCTTTTAGATCCCAAATAATAGCAAATGACAACACTTTGGAGCCTTAGAAACCTCTCTTGGACGCCTGGAACTGACTGTTGGACGCTTGGACTGGTCTTTGGACGTAGGGACTACCTCTTGGGCGCCTAGTCTACTGTGTTGGAAGCTCAGCTCCCTCTGTTGGATGCCTAACAACTTGCTGATGGACTGGATACAAGGTGATGGATGCCTATCTCCCTCTTGGACGCCTAGGGTTTCTTAAAAGTTCCACTGAAAACTTTTCCTTTATCTCTCAAAGCCTCGAGAGTGAGAATTTTCTCAAAATTTTTGTGTGATTACTTTTCCAAACTCATGCCCTATTTATAGGAGTTGGATGACAAGCCTTGTCATCCAACTTCACATCTCAGCTTGACACTTATCCAAGTATGTGGCTTCCAATATGTTAACCTAAGCATGCATGAAGACACCTCCTCCTTTTGAGTTGTTCAATTCTACGTGTGCCATCTCCTACTTTCTTTCTACCTCTTTAGACGCCTCCCCAAACTATTCCCGAGCCTTGTCCTACATTCAACTTGGCTTGAAATCATGTCCCATGCATCCAACTTGTGTGTTTTTAGAGTATACTTCTTTCGCTTCCTTGTAACCAATAAGAATCATCCAACACTTAACCATATATCCTCCAAAGTTAGAGCATGCGCCCAACATCCCAAGAACCTTGTACTTAGCCAAATTTTCCTCCTCTTAAGGGAGTATGCATCCAACCCTTACTTTGGCCTACATACCATGCGTTCCAACCTTGCACTTTGCCTCAACTTTGTACAACTTGCTCACTCATCACCTATGAACCATGCGTTCAACTCTCAAGTTCCAAGTCTCTTGTACTTAGTGAGTTTTCCAACCTTCATAGCCTTCTATGCATCCAAATCACAGCATATTGATTTTGGTCATATTATCTTTCCTCTAGTCTAGAAAAGTTGTTCCATACTTGGCCATAATCTCAATATTTTTGCCCTATGCGTTCAACCCTCTCCTTTTGCCCTAAGTGATACCTTTCCAACTATTTGAACTCCTTCAAAATTCTGCCAAAACTTGGACTATGTGTCCAACCTACCTTCTTTGGCTTAGGTGTTCCTTTCAACAACCATAAGTTCCTCAACACTCAGTCAAAATTTTCCCAAAAATTCAACCATGCGTCCACCATGGTCCTACTATGCATCCAAGACCTATTTTTTCCTCCAAGACATATGTTTCAATCTTAGTTCCAAGTTAACCAAGTTTTTTTTGTTTTTGAAAAGGAAACATGTCTCTTTTATTGATATAATGAATTGAGACAATTTCTCAATCTCAAAGATACAATATAGAGTAATTTAAGGATCAATGAGTGCACCAGGACATCTCAACTAAGTTGATACTCCCTAGCACTCTCATCATATCCTATCGAAACAAATTAAAATACACTAATGAAACTCAGAAAAAGTTCCCAAATACAAGAGATCAAGTCGGGAGGAATAGCCGAAGAAAACTAAACAAAATATGTCAGCAAAAAAACAAAACAACTCATGAATTCGAAAATGGAAAACAAAGCTGCCAAAACGTAGGTTGAGGAGGCTAATTTGCGGTAGAGCCGTCTGGTCCAAGAGCTTTGTTTTTGCCCAAGTTAACCAAGTTAACTCTCAACTATGTTTCCAACTCTTACTTCCAACACTTAGTCAATTTTCTTCTACTTTTCAAGCCTATGCGTTCTCCTTATAGATTTTCCAAGCATAGTTTTGACACTTAGAAAAATTTCATAGCACCGTTATCTCCTTGTGGTCCAACACTTAGAAAAATTGCCTCCCAATCACTTCTATGACTTATTCTCTCTTTAAAACTCAAACTTGTGCAAACACTTTCCTTTTACCCTACCATGTCAATGCCTAGACCCCTTAAACAATCAGAAATTTTTCCAACTCCACAAACCCAGAAATTATACTCTAAAATTTTTCTAACTCCATAAGCTTGTGGTTAAACTTTTTACCTAAAGTTCAATAATCACTTTCTCTTCTTAGCATATAAACTTACGTCAAATTTTCGGGTTTAACAATTCTACACCCCTTAGAAGAATTTCGTCCTTGAAATTTAAACTTAAACCATATTCACAAAAATTCACAATTTTATTTATTGAACAAAACAACTATTACATAAAAGTAGAAGTACAACATAAGAAACAACAATAGCAAAGAACGTAACAATAAGACTACCGCATAACCAAACATTTAAACTTTAAGCGACAACTGTCCTTCAGTCGGAGAATTCCTTTTAGTACCAATAGTTCTTCCATTTGTCCTTCCGAACACCACTTGCATTTAGAGGGCAATCCTTGCAATAATGTCCTGGCGGCTCGCACCAATAACAGACATCTTCACTACCCTCTCTATCTTCTTTGTGCCACCTACCACAATTGGGACAAGGAAGGTTTAATCTTCTAGACCTCGAACTCTCCGAAGTGTTTTTAGCTTGTTGCTGGACAGATTCAATGAAAACTGGGCATCCTTTCCTGGTATGCCCCTCTTGTCCGCATGTGTAACATTTATTTGTTCCTATTAAACATTTTCCCATGTGGTATTTTCCCCAATTGGAGCACTGAGACTTTTGCTTCTTATTCCCTTCGCTTGACATAATTGTACTGCAATAAATCTAAAGGTTAATCGAGACAAGGGGATATCTACATCAATTATCTTATTAAGCATCAAAACAAACATTAGGGTTTGTATAACATAATAAATATTACGTTTATATTATGTTCTGAATTTAGAAAAGTTTTGTATAATCTTCAAGTTTTACGTTTAATCTAAGATTGTTTGCTAAATTGTGCATGCAAAAGTGTGTAAAGGAGTGAAGGACGGACAGTAAATGTCACAGAAGGGTGATGTCTACTATCTTCACGCCTCTTCACGAGTTCAAGAGGGTAATTCGGGAGGGAGTGTGATATTGAAACTACTTAGGCTACATCACTTAGTACTAGTTGGATCCAATGTTATTGAGGTGACCCTAAGCGCACGTCTAAGGCGAGAGGCACTGCAACCTGGGGTCAGTGCGCGTTTTGTGTTGCTTAGGCGAGCGTCTTCAAAGATGTGCTTGCCCGGTGGCGCCTGGCAGCGCCTCTTTGAATATTTATTTTTTTTTTCTTTTTAAAGTTTTTAATTTTAAAATTGATCGACAACCACTTCCTTCAACTTTCAAAGCTTCAATTTCTTCTTTTTAGACTTTTTGAATTCTTCCTTCAACTTTCAAAGCTTCAATTTCTTCTTTTTAGACTTTTTGAATTCTTCTTCTTCCTGAATGGCAGCCAACCCTCTCTTCTCTTCATGATTTCTTCTTCTTTTTGCGGCTGCTTCTTGTGGCTTTCGATTGTGGGTTTTAGTTTCTGAAGCTCTGGGTTTTGTGTAAAGGTATATTGATATTATCTTATAATAGTATTATATTATATTTTTTCTGCTGATTTCTTTAACTGAAAATTTTTAAATAAAAAATTTAGTCAGTTAGCGGGGTTCAAATTCTGTATTCTTGAGCAATAAAATCTGTATATGTATATCATTATTATTTTATTATATATTTTTATATTCATATTGGTGGGTGGGATATTTCTTTTGCTATTTTGCATTGTTTTCTAATAAGTAATAATTATCTTAATATTTGCATGTTATTTATTAAATATTCAGTGGTGTGGGGTGAGTGAAATATTATCTTAATTTTCTTTTCAATAAGTTTTATTTCATAATAATAATAATAATAATTATTATTATATTCATATATTCACTATTCAATGGCGTGAGTTTTTTTAGCATTTGAATTCGTTTACAATTTATTTTTATTAATCTTTTAAGGCTTTGACATATGTTTGTGAACTTATGTTCTACATATATTATTTATATAGTTATTTATTGCACCTCGTTTTGCTTAGGCGTCGCCTTTTTGTTACTCTCGCTTTGAGGTGATCAAGGGACTTGTGGCTTGAGGTGCGCCTTGTGCTTTGAAAACACTAGTTGGATCTAGTTTAAGTTTTTTTAGACCTCCAATCACAAATTCCAAGAAGGGTAAAAGAGGAAACTCGATCAAGTATGGATAACTATCCAACTTTATCTACTTTAAATAAGTATTCTATTTTGTCAAAGGCCTTAAATCGAGGGTGAAGTCCAAGCTATACAAACAGAGGGTACAGGACCTCACATCTGTTTACGCAGCAACTAAATGATTGTTTGATCTTAATAACGACTCTCAAGGCGTGAGACGACAACCAACTAAGCCCTATCAACCCCTGGAGCTAGGGCTCATGTATGTAGACACTTGGGTCAACCATAGATCGGCCAAGAGTACTATGGCCGACTCTGGGCCACCCTCAATTTTATGATTGAGGTAGAAGCACATCAACTAAACCTTCGATGGGGATAGACGTAGGGAAGATGAAAGGACTGCAGCCTTACCCATCATAGGAGAAGTAAAAAGAGCAGTGGTTAAGATGGGACATTGGAGTCGACATGCCGATATCACGATCGTCAAGATGGATGATTTTGATGTAGTATTAGGGATGGAATTCTTGCTCGAACACATGGCAAAATGCTTTGTAATTACGAGATCCACTCTCGCTGTTGTCTAGACCAACATCAAACAATCGAATGGGATAAGGATGATCTCGACCCTCCAGCTTAAGAGGGGTCTCATGCATGATGAACCCACATTCATGGCCATCCTTGTCGAGTTAGTTGAGATGAAAGAAGAGACCGACCCCGAAGACATTTAGTTTGTCTGGAAAAATATTAAGATGTTATGCTGGACAACCTACCTAAGTTCTTACCTTCAAGAAGCGGGATCGACCACAAAATTGAACTGTTACCAAAGGCAAAGTCGCCTACGAAGAATGCCTATCGTGTAGCACCACCCAGATTGGCAAAACTTTGGAAGCAACTAGATGAGTTGTTAAGCGCGAGGTTCATTTGACTAGAAAAAGCACCTTACGAGCTCCAGTGTTGTTCCAAAAGAAGAAAGACGGAAGCCTTCAGCTATGCATCGACTATCAAACCTTGAACAAGTTCATTGTTCGCACCAAATACCCACTACCTATCCATGGACTTTGACCGACTTCATGGCACCGAATATTTCTCAAAATCGGACCTCTGATCAGGGTATTATCAGTTGCCAATAGTCGAAGGGACGAACCAAAGACGACAGGTGTCACGAGGTATAGGGCCTTCGAGTTCCTCATAATGCCCTTTGGCCTCACTAATACTCTGGCTACTGTCTGCACACTGATGAATTAGGTTTTTCATGAGTAGCTTGAAAAATTTGTTGTAGTGTATTTGGACAACATTGTGGTTTATAGTGCGATGATGGAAGACCACCAACTTCACCTCCAGTTGGTCTTCGAAAAGTTGAAGAGGAACCAGTTGTATGTGAAAAGAGAGAAATGCTCCTTTGCTTTCACCCATCAGATTAAACTTTTGGATCAATCAGCGATTTAATATTTATAAAATTATTATAGGCGACATTGCCACCAACTTGTGCTGCTCTTTCTCTTCTTACTTGGCCATGAATGTGTGGATCAAGATCAGAACACCATTGTGTGAGTGATCATTTTTTAGTGTTCCGTGGGTATTTGTTAGGCAAATTAGAATGCTAAACTAAGGAAACCTCCTTTTGGTCGCACGAGTTTAGAGAAAAAAAGTTCATCATTGAATTAGACCTCATGACAAGAAACATAACTTTCATTATCAAATAAAAAAATACCAAAAGAGGAGATGAGGTATCTCCACAAAACAACTTACAATGAAGGACCTTAACTAGTAGAAATTTGGGTTAGACTATAATTACAAAAGAATTTAGAAGTAGAGAAATGAGTAGAAGCAAAAAAGAGTAACCATATTTTGAAAAGTGTCCATGTTAGTTTCTTTACCACAAAAGATTATAGAGTTTCTTTTAAATCACAATCTCTTGTTAGGCTACCACTTAACAAGTATACTCAAGAACATCGAAAGCTCAAAGAGTGCTAAAAGATAGAATTATATTGCAATATCAATGAAGAATCTATAACAGAGCCTTTTGAGGAGGCTACACTCCTAGATTTTCACAATGGAAATTCCTACCAAAATCTTCACACCTAAGTTTTTGTTTCGTAGTCTGGTTGATCCTTCTCCCTTAGGAATGTTAGCTTTTCGGTGCTTTGGAGGATTAAGATCCCTAGGAAAGTGGGGTTCTTTACTTGGCAAGTTCTACATGGTCATGCTAACACGATGATTGGCTTGTGAAGAAGTTGCCCTTGCCTATTGGACCATTCTGGTGTATTCCTTGTCGGAAGGTAGAGGAAGATCTAGACCATATTCTTTGACATTGTGAGTTTGCGAGTTTCGCTTGGGACTTTTTCTTCCAAATGTTTGATTTCTTGTATGCTCATCACAGGACACTAGTGTTATCATAGAGAAGTTCCTCATGAATTCGCCTCATTGGGAGAAGAGTCGCTTTTTATATCTTGCTAAAGTGTGTGTGACCTTATGGGTTTTGTGGGGAGAGCAAAATAGTAGGGTGATTAAAGAAAGGGACCCTAGTGAGATTTGGTCCCTTGTTCACTTTCATGTTTCCTCGTGGACTTTGATTTCAAAGATCTTTTGTAATTATATTCTTTAAGCGTTATTTGCATAGCTGAAGTCTCTTTTTGTAGAGGGAGTTTCTTTTTTGTAAATTTGGTTTTTTGTATGCTCTTGTATTCTTTCACTTTTTCTCCATGAAAGTTGTTTCCATCAAAGGAAAAAAAAAAAGCTGTATTAGGAACCAAGGTAGTATGGGCTACCTTTATCCCACGTTGGTTAGAATGGGATGACCAATGTGGTACTTAAGTGGCTTGAGTCTCTCACCTCAATAGCTAGCTTTTGGGGTGTGGTTCTCTAAGGTGCTTAAGTACCTAACAAAGGTATCAGAGTCAGTTGTTGACGTTACAGAATGGAACCGGTGGAGGGTTTTGACTGGATGTGGCGGAGTGAAGTATCGTTGGAGTAGCGGCCGGGATGTTGGCTTTTTGAGGATGGGATATTGTTAGGAACCAAGGTAGTATGGGTTACTTTTGTCCCACATTGGTTAGAATGGGACCACCAATGTGGTACTTAAGTGGTCTGGCTCTCCCACCTCAATAGCTAGCTTTTGGGGTGTGGTTCTTTTAGGTGCTTAACACTTTCTTAAATTTCTCGTTGGGATTTGTAACAAAGATAGAATGGGATTATAGACTACATGGGTCTTTCATCGATGATATTGTAAACTGTGTATCATGTTTTATTGTATATATGGTTTAAACTTTATACTCAACTGCAATGTCCTTCGCCTCCGTTTGATTTGAACATAAACAACATATAGGACAGAAGGGTCATTGTCCTCACAAATTTGAAGCCAAGAAATATGCGGGGCATCAAGTCTTGTGGAATGCTAATGGCTGCTTCTGATTCTTTGCATGAGAACGTTGAACTTCTTTTGCCCCCTGAGGGTTCGATTCCAGGTGAAAGAATATGGTTTGGATCCGAAGATGAAAAAGGCAACCAACCTGATGCTGCTACCCCCAACCAGGTAAAGAAAATTGTTTTGAATAATTTGGATCCTGCTGGATTGGAGTGCCATTTTATAATGTTACATATTTCTGTGCAAATTTTAACATAAACTTGCTTAGACATCTATGCATTAATTACCTAAATTATTTGAGCTCTAAATATCAAACCGCTACGTTAGGATGAGTTCTATCTCTAAACGATGTAGAAAATTTTTTCCTTTTTTTATTTGAAGGAAACATAAATTTTCATGTGGTTGATAACAAATGAGTTTATTGTAGCTGTGCTTTACATCTTTACAGATTCATGTCTGATGTGTTACGGCCTTTTATAGTCCTAGTGTTATACCAAAATGTTCTACTTCTACCTACTCGAAAACATTTTGTTTTCAGCTACGAAAGAAAACTTTTATGAGAATGGATGATACCACAGAAACTGACTGAACACAGCAAAAGGCTTGAAAGCAGCCCCCACATAATCAACAAACTTGCACAAGTAATAATTACAAGTTCCATTTGTATTCTGTTTTTCTATAAAAGAAATAATAGAGGGTTTAGGGTTTTGTCCTGTCAAAAAAGAAAAAAATGCTTTCTCCTCTCTCCATGCGTCCCCGCCGTTCTAGCCTCCTAATTCAATCAGAAAACCAAACCTCATCCTAACATGAAAGTAACGAGATATAGGAGAATACTTTTTGTGTAAACAGTGATATGAAAGATCTCTTTGTTACAAAATTTTGCAAGCCTTGAAAATGTAAATAAAAAAGCATTCTAATCCATCCTAGTATTTGTTGCGAGGGGATATGCGAGGTCAGCCATGACTTTAAGTCGATGGTGCTACAGTCGGTGCTAGTTTAGTCAGTGTTGGTTCAATCGGTTCTTGATCTAGAGCAAAGAAGCTCTGCAACTGTCGAAGTGAATTCTCAACTTTTCATACAATTGGTGCAGATATGATAATGAATGGTTGTAATTCTTATAAGAAGTTTCCATCTAATAGATGACTCTATTATGACAAGCCATAATACGTGAAACAATCACATCTATATTCATGGAGTCAACCATAAATGGAAAGGGAGTAATGGATAAAAGTCAAAGGAGGAAGAAGATAGACTTGTCGAAGGAGGATGAAGGGGTTTATGGAAGAAGTAGGCTAGAAACTTGAGAACGATTCCAAAAATTGAAGGGGGTAGTTTGTTTGTAAACGCATTCTCAAGTCATAGTTGTTGGTGAGCTTCAAAAGGCCTTTGGGGTTACTTCGGTGACGTCGTCGAGGATGAGATCGCCAGAGATGAAGAAATTAAAGGTGAAGTGATACAAAACCTCATAAAGGAGAGACAATGGCGACGATCTTCTTCCTCACCTTAATTCTCTCCTCAATGTTTCCTTTATGGATCATCCGTTGAAAATTTGGACGGTTTCAAATAAATTACCTTGAGGTCTTCCATGGGTCTTTTGAGGTCTTCCATGGGTCATATAGAGGTCACTCATGGGTCCTCTAAGGTTCTCTATGTGACTGCTAAGTCCTCCACAAGTTTTACAAAGGTTATTCATGGGTCTTCCAAGGTTCTCTATGTGATTGCTAAGTCCTCCATAGGTTTTATAGAGGTTACTCATGGGTCCTCCCTTTTATTGGATTGCTAAGTCCTTCTATGATCTTGTAGAGGTATTTTATAGGTTCTCCAAGGTCCCCCATGTGACTCATAAGTCCTCCAAGGTTGTCCTTGTGGTATTGCAGAGGTTTTCTATGGGTCCTTCATGGGTATTACTGATGTTCCTTGTGGGAATTATGAGCCTTCACTGGCTCCCTCATGGGTCAGCTGAGCTACTTCTAGGCTCCCTCATGAGTCCTTTAAGCTATCTGTAGGATTCTCTAAGCATAGTGTAGGCTCACTCGTGGGTTCTTTGAGCTCACTCTAGGCTCCCTCATGGGTCCTTTGGACTCCTTCTAGGCTTTCCCATGAGTCTTCTAAACTCTTTAGGACTCCTTCTAGGCTTTCCCATGAGTCTTCTAAACTCTTTCTAGGCTTCTTCATGGCTCCTTTAAGCTCACTCTAGGACCACCCAAATAAAAGAATATGGAATTTTTAAGGGCTATAGCCCCATGGGCATGCAAACTAAGGACTCTAGAATTATCCTCTCAGACCTTACATTCTCCAAGGAGATAATTCTTCCCTTCAACAACAGTTTTACAGCTCCATGTTTGAGGCGTACATGCTTCCTTTTTGCCATCATACACATTGTTATTGGGAGATTGTTTAGCAGCCAAGTTTGATGGGTGGTTTGGATGTTGACAATTTTTTGTTTGTGTGATCATGCTTTGTTAGCAAAGTGGATTTGGCGTTTTCTTCATGAGCCTACTGCTTAATGGTGTGCTGGCCTGCTGTTGTTCGACGTGGGTCTACCGTCTACTCGATCTCCTTGGCAGTGCTTTTTCACAGACTATTCTTTTGATTGCCTCTCGTACTTGAAATTGTCTTGGTACCGACATTACTATTTTTTCCCTTGAAATGGCGGTCACTGGCCGCGATTGGTTTTTTTCCCTTCTTCATTTTCACATACACAAAAAAAAGAGTGAAACTAACGAATGGACTAAGAATGCTATTAAATGAAACATCAAGAGTAAAATCATTTCATGCCAACAAAAAAGGAGACAAATTAGGAATTTAAAGCAAAACCAGATTTGTTATAAATGTGTTAGTAAACTAAATTTCAATTTTTGCTAAGTTATTAAAAGATAAATTTGTTATAAAGAGAGAGATAAGTTAGAAATTTAAAGCTTAACTAAATTTCTTATAATACGAAATTTTAAAGCTTTGTTACTTTGTTACCGAGAACTAAATTTGCTATAAATAATAACTAAATCATTGCCCTTCCTACATTATTGTCATGAAAATTATTAAAGCAAAGGAGTTGATTTAGGATTACAAAAGACATAGCTAATAAAAAATTCATTTTAAAATGAATAAAATAAATGTTATATAACATAAAAATTGATTCATGGTACACGAGAGGATATACATTTCACAAAACAACTACTAAAAAAAGGGAAAAAATACAGATCATCTAGACACAGGCATATATAAACTGCACCCTAAATAGAGGCTTTAGAAACTCAAGCTTTTAAACCATACACACCAAATACAGGCATTTGTGATTCTCAAGTTTCAGAATTCCCTAAAATAAGCCCCCAGGCATTAGATTCCGATCCTGCATGCCAAACGCCTCTAAAAAGATTCTCTTATCTGGCTTTTCCTATTTATATTTGGGACCTGGGGTGCAGAGAATTGGCGAAAAATCAACTAAGAACATCTTGTGGTGTGGTGGCTGGAAAATTTTTATACTTTCTAACATTCACAAGTAACTAGGCTAGCTCACACCCACTTCAACTTATCTTGCAACACAACCACCTGATTTTACTGAATTTGGTTGTGAAGAAACTCCTAGGATTTTAATATTCTAGGCAAAATCTTCCATATATGCAGCCACCATGGAGTTTCAATCAATTTCCTGAAAGTTCTTTTCAAGTTGTTGCATCAATCCAGGGTTGTTGTATGATAATATATATTTGTTACAATTGTAAATAGTTATTATGAAAAATTGGAAATAAGATAGTTTAATTTGTGGTGTTGCAACTGCATTTGAAAATGAATTGCACAGATTCAGAAGAAGAAAATATGGGAAATGGTGCAGCCTCATCTGAAGACAGATGCTTGTTGCATTGCTGTGTTGGGTTCCCATCCAATGCGGACCTCCACTGGTGTTGTCACCTCCACATCCCTTAAATACGCAAACATATCTTGACTCGCCTGGGTTACATTGGTACGACACGACATGAATTCACTCTTCCATGTAAAAGAAGTAATGAAATGTACAGTACCTTGTAACTTTGTAATGCGTTTTTTTAGTGATGCAGTTTTCAAGAAGTTTTTTCAGAAAATTACAAGCACTTAGAAGTAGCATCTAAAGTGCTTTGTGACAAAGCACTTGCTTTCGGCCCTTATCATACAATCTCTGTCTAAGCTATGTTATTCTTTTTACAATAGTCCACGCATGCCCTAAAGCCTAGAATCTAAACAGACATCAGGGGTTTTTCCTTAGTAGGTCTTAACCAACTCTTCCTTGGAGGCTATATTTATTTATACTAATGTTATTGAATAAATAATATATAATGAATCAACCACTTGAATAATGGGAG

mRNA sequence

TTCCCAATTACCCCCAACGATGGCTTCTCTACCAACGGCCGCTGCAATTGCCAATGTTACAAAAACTGCCAGCAATCGCCGCTTCTTCTTCTTCTCTTCTTCCCTTGCCCATAACTTCAACCATTGTCGCCCGTTCTTCGCTGTACGTCCAACTTTTTCTAATTTTACCCCACCACTTGGTAAGGATAATGTCGCTACCAGGGGAAGAATCTCCAGAAATGGTGCGCGGTTTCCCTTCTCACTTTGCACTATCGCATCCACCGAGTCTGTCACCAGTGACGCTGCCATTGCATCGTCTTCCACATCATTGGATAAGGACGATGATCAGGAAAAGAAGATTAAGGACGTGGCCGACACGCTCGATATTAGGGTTGGGCGAATCATTAAGGCTTGGAGACATCAGGAGGCTGACTCTCTTTATGTAGAAGAGGTTGACGTTGGTGAACCCGAGCCGAGGCTTATTTGCAGTGGCCTTGTTAAATATATCCCTCTTGATCAACTTCAGGACAGAAGGGTCATTGTCCTCACAAATTTGAAGCCAAGAAATATGCGGGGCATCAAGTCTTGTGGAATGCTAATGGCTGCTTCTGATTCTTTGCATGAGAACGTTGAACTTCTTTTGCCCCCTGAGGGTTCGATTCCAGGTGAAAGAATATGGTTTGGATCCGAAGATGAAAAAGGCAACCAACCTGATGCTGCTACCCCCAACCAGATTCAGAAGAAGAAAATATGGGAAATGGTGCAGCCTCATCTGAAGACAGATGCTTGTTGCATTGCTGTGTTGGGTTCCCATCCAATGCGGACCTCCACTGGTGTTGTCACCTCCACATCCCTTAAATACGCAAACATATCTTGACTCGCCTGGGTTACATTGGTACGACACGACATGAATTCACTCTTCCATGTAAAAGAAGTAATGAAATGTACAGTACCTTGTAACTTTGTAATGCGTTTTTTTAGTGATGCAGTTTTCAAGAAGTTTTTTCAGAAAATTACAAGCACTTAGAAGTAGCATCTAAAGTGCTTTGTGACAAAGCACTTGCTTTCGGCCCTTATCATACAATCTCTGTCTAAGCTATGTTATTCTTTTTACAATAGTCCACGCATGCCCTAAAGCCTAGAATCTAAACAGACATCAGGGGTTTTTCCTTAGTAGGTCTTAACCAACTCTTCCTTGGAGGCTATATTTATTTATACTAATGTTATTGAATAAATAATATATAATGAATCAACCACTTGAATAATGGGAG

Coding sequence (CDS)

ATGGCTTCTCTACCAACGGCCGCTGCAATTGCCAATGTTACAAAAACTGCCAGCAATCGCCGCTTCTTCTTCTTCTCTTCTTCCCTTGCCCATAACTTCAACCATTGTCGCCCGTTCTTCGCTGTACGTCCAACTTTTTCTAATTTTACCCCACCACTTGGTAAGGATAATGTCGCTACCAGGGGAAGAATCTCCAGAAATGGTGCGCGGTTTCCCTTCTCACTTTGCACTATCGCATCCACCGAGTCTGTCACCAGTGACGCTGCCATTGCATCGTCTTCCACATCATTGGATAAGGACGATGATCAGGAAAAGAAGATTAAGGACGTGGCCGACACGCTCGATATTAGGGTTGGGCGAATCATTAAGGCTTGGAGACATCAGGAGGCTGACTCTCTTTATGTAGAAGAGGTTGACGTTGGTGAACCCGAGCCGAGGCTTATTTGCAGTGGCCTTGTTAAATATATCCCTCTTGATCAACTTCAGGACAGAAGGGTCATTGTCCTCACAAATTTGAAGCCAAGAAATATGCGGGGCATCAAGTCTTGTGGAATGCTAATGGCTGCTTCTGATTCTTTGCATGAGAACGTTGAACTTCTTTTGCCCCCTGAGGGTTCGATTCCAGGTGAAAGAATATGGTTTGGATCCGAAGATGAAAAAGGCAACCAACCTGATGCTGCTACCCCCAACCAGATTCAGAAGAAGAAAATATGGGAAATGGTGCAGCCTCATCTGAAGACAGATGCTTGTTGCATTGCTGTGTTGGGTTCCCATCCAATGCGGACCTCCACTGGTGTTGTCACCTCCACATCCCTTAAATACGCAAACATATCTTGA

Protein sequence

MASLPTAAAIANVTKTASNRRFFFFSSSLAHNFNHCRPFFAVRPTFSNFTPPLGKDNVATRGRISRNGARFPFSLCTIASTESVTSDAAIASSSTSLDKDDDQEKKIKDVADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTNLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANIS

Homology

[Close]

BLAST of CcUC04G060990 vs. NCBI nr
Match: XP_008449535.1 (PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 469.5 bits (1207), Expect = 1.9e-128
Identity = 243/280 (86.79%), Postives = 255/280 (91.07%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFNHCRPFFAVRPTFSNFTPPLGKDNVA 60
           MASLPTAAAIANV KTA+N R FFFFSSSL+HNF+HC PFFA+  TFS FTP L KDNVA
Sbjct: 1   MASLPTAAAIANVAKTATNARFFFFFSSSLSHNFDHCIPFFALPRTFSRFTPSLRKDNVA 60

Query: 61  TRGRISRNGARFPFSLCTIASTESVTSDAAIASSSTSLDK-DDDQEKKIKDVADTLDIRV 120
             GRISRNG RFPFS CT ASTE VTSDA+IASSSTS+DK DDD EK IK+ AD LDIRV
Sbjct: 61  --GRISRNGTRFPFSFCTTASTEPVTSDASIASSSTSMDKGDDDPEKNIKNAADMLDIRV 120

Query: 121 GRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTNLKPRNMR 180
           GRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRV+VL NLKPRNMR
Sbjct: 121 GRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVVVLANLKPRNMR 180

Query: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIW 240
           GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA+PNQIQKKKIW
Sbjct: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAASPNQIQKKKIW 240

Query: 241 EMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANIS 279
           EMVQPHLKTD CC AVLGSHP+RTSTGVVTSTSLK+ANIS
Sbjct: 241 EMVQPHLKTDGCCTAVLGSHPLRTSTGVVTSTSLKHANIS 278

[Close]

BLAST of CcUC04G060990 vs. NCBI nr
Match: XP_038882664.1 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Benincasa hispida])

HSP 1 Score: 468.0 bits (1203), Expect = 5.7e-128
Identity = 247/288 (85.76%), Postives = 255/288 (88.54%), Query Frame = 0


Query: 1   MASLPT-AAAIANVTKTASNRRFFFFSSSLAHNFNHCRPFFAVRPTFSNFTPPLGKDNVA 60
           MASLPT AAAIANVTKTA+N RFF FSSSL+HNF+H RPFFA+R TFS FTPPL KDNVA
Sbjct: 1   MASLPTAAAAIANVTKTATNARFFLFSSSLSHNFDHDRPFFALRRTFSRFTPPLPKDNVA 60

Query: 61  T----RGRISRNGARFPFSLCTIASTESVTSDAAIASSSTSLDK-----DDDQEKKIKDV 120
           +    RGRISRNG RF  S CT  STE VTSDA IASSSTSLDK     DDD EKKIKD 
Sbjct: 61  SIERRRGRISRNGGRFSPSFCTTGSTEPVTSDAVIASSSTSLDKDGGHDDDDLEKKIKDA 120

Query: 121 ADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLT 180
           A TLDIRVG+IIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRVIVLT
Sbjct: 121 AGTLDIRVGQIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLT 180

Query: 181 NLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPN 240
           NLKPRNMRGIKSCGMLMAASDSLHEN+ELLLP EGS PGERIWFGSEDEKGNQPDAATPN
Sbjct: 181 NLKPRNMRGIKSCGMLMAASDSLHENIELLLPHEGSFPGERIWFGSEDEKGNQPDAATPN 240

Query: 241 QIQKKKIWEMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANIS 279
           QIQKKKIWEMVQPHLKTD CC AVLGSHPMRTSTGVVTS SLK+ANIS
Sbjct: 241 QIQKKKIWEMVQPHLKTDGCCTAVLGSHPMRTSTGVVTSPSLKHANIS 288

[Close]

BLAST of CcUC04G060990 vs. NCBI nr
Match: XP_004144343.1 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 459.1 bits (1180), Expect = 2.6e-125
Identity = 241/280 (86.07%), Postives = 248/280 (88.57%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFNHCRPFFAVRPTFSNFTPPLGKDNVA 60
           MASLPTAA IANV KTA+N R FFFFSSSL+HNF+H  P FA   TFS FTPPL  DNVA
Sbjct: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60

Query: 61  TRGRISRNGARFPFSLCTIASTESVTSDAAIASSSTSLDKDDDQ-EKKIKDVADTLDIRV 120
             GRISRNG +FPFS CT ASTE VTSDA+IA SSTSLDKDDD  EK IKD AD LDIRV
Sbjct: 61  --GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRV 120

Query: 121 GRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTNLKPRNMR 180
           GRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRVIVL NLKPRNMR
Sbjct: 121 GRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMR 180

Query: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIW 240
           GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA PNQIQKKKIW
Sbjct: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQKKKIW 240

Query: 241 EMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANIS 279
           EMVQPHLKTD CC AVLGSHPMRTS GVVTSTSLK+ANIS
Sbjct: 241 EMVQPHLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS 278

[Close]

BLAST of CcUC04G060990 vs. NCBI nr
Match: KAG6595713.1 (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 452.2 bits (1162), Expect = 3.2e-123
Identity = 239/291 (82.13%), Postives = 251/291 (86.25%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKTASNRRFFF----FSSSLAHNFNHCRPFFAVRPTFSNFTPPLGKD 60
           MASLPTAAAIANVTKTA+NRRF F    FSSSL+H F H RPFFA+RPTF  FTPPL KD
Sbjct: 3   MASLPTAAAIANVTKTATNRRFLFFSSSFSSSLSHKFAHSRPFFALRPTFPCFTPPLHKD 62

Query: 61  NVA----TRGRISRNGARFPFSLCTIASTESVTSDAAIASSSTSLDKD-----DDQEKKI 120
            VA    TRGRISRNGARFPFS CT++STE  TSDA IASSS+S DKD     DD EKKI
Sbjct: 63  KVASIQETRGRISRNGARFPFSFCTVSSTEPATSDAPIASSSSSSDKDDGNDNDDPEKKI 122

Query: 121 KDVADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVI 180
           KD AD LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRV+
Sbjct: 123 KDAADMLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVV 182

Query: 181 VLTNLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA 240
           VL NLKPRNMRGIKS GMLMAASDSLHENVELLLPPE SIPGERIWFGS+D+K  QPDAA
Sbjct: 183 VLANLKPRNMRGIKSFGMLMAASDSLHENVELLLPPEDSIPGERIWFGSQDDKEKQPDAA 242

Query: 241 TPNQIQKKKIWEMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANIS 279
           T NQIQKKKIWEMVQPHLKTDA C AVLG HPMRTS G+VT+TSLK+ANIS
Sbjct: 243 TANQIQKKKIWEMVQPHLKTDASCTAVLGPHPMRTSAGLVTTTSLKHANIS 293

[Close]

BLAST of CcUC04G060990 vs. NCBI nr
Match: KAG7027675.1 (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 452.2 bits (1162), Expect = 3.2e-123
Identity = 239/291 (82.13%), Postives = 251/291 (86.25%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKTASNRRFFF----FSSSLAHNFNHCRPFFAVRPTFSNFTPPLGKD 60
           MASLPTAAAIANVTKTA+NRRF F    FSSSL+H F H RPFFA+RPTF  FTPPL KD
Sbjct: 1   MASLPTAAAIANVTKTATNRRFLFFSSSFSSSLSHKFAHSRPFFALRPTFPCFTPPLHKD 60

Query: 61  NVA----TRGRISRNGARFPFSLCTIASTESVTSDAAIASSSTSLDKD-----DDQEKKI 120
            VA    TRGRISRNGARFPFS CT++STE  TSDA IASSS+S DKD     DD EKKI
Sbjct: 61  KVASIQETRGRISRNGARFPFSFCTVSSTEPATSDAPIASSSSSSDKDDGNDNDDPEKKI 120

Query: 121 KDVADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVI 180
           KD AD LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRV+
Sbjct: 121 KDAADMLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVV 180

Query: 181 VLTNLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA 240
           VL NLKPRNMRGIKS GMLMAASDSLHENVELLLPPE SIPGERIWFGS+D+K  QPDAA
Sbjct: 181 VLANLKPRNMRGIKSFGMLMAASDSLHENVELLLPPEDSIPGERIWFGSQDDKEKQPDAA 240

Query: 241 TPNQIQKKKIWEMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANIS 279
           T NQIQKKKIWEMVQPHLKTDA C AVLG HPMRTS G+VT+TSLK+ANIS
Sbjct: 241 TANQIQKKKIWEMVQPHLKTDASCTAVLGPHPMRTSAGLVTTTSLKHANIS 291

[Close]

BLAST of CcUC04G060990 vs. ExPASy Swiss-Prot
Match: O54873 (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cricetulus griseus OX=10029 GN=AIMP1 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.7e-34
Identity = 82/171 (47.95%), Postives = 107/171 (62.57%), Query Frame = 0


Query: 99  KDDDQEKKIKDVADT----------LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLI 158
           K + +EKK++  A +          LD+R+GRI+   +H +ADSLYVEEVDVGE  PR +
Sbjct: 177 KGEKKEKKLQSAAPSADSKPVDVSRLDLRIGRIVTVKKHPDADSLYVEEVDVGEAAPRTV 236

Query: 159 CSGLVKYIPLDQLQDRRVIVLTNLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIP 218
            SGLV ++PLDQ+Q+R V++L NLKP  MRGI S  M+M AS    E VE+L PP GS+P
Sbjct: 237 ISGLVNHVPLDQMQNRMVVLLCNLKPAKMRGILSQAMVMCASSP--EKVEILAPPNGSVP 296

Query: 219 GERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCIAVLGSHP 260
           G+RI F   D    +PD        KKKIWE +QP L T+A C+A     P
Sbjct: 297 GDRITF---DAFPGEPDKELN---PKKKIWEQIQPDLHTNAECVATYKGSP 339

[Close]

BLAST of CcUC04G060990 vs. ExPASy Swiss-Prot
Match: Q5R8T5 (Tyrosine--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=YARS1 PE=2 SV=3)

HSP 1 Score: 144.4 bits (363), Expect = 1.9e-33
Identity = 81/170 (47.65%), Postives = 108/170 (63.53%), Query Frame = 0


Query: 110 VADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVL 169
           +   LDIRVG+II   +H +ADSLYVE++DVGE EPR + SGLV+++P ++LQDR V+VL
Sbjct: 364 IPSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVL 423

Query: 170 TNLKPRNMRGIKSCGMLMAAS-DSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAT 229
            NLKP+ MRG++S GML+ AS + ++  VE L PP GS PGER+ F    EKG   +   
Sbjct: 424 CNLKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGERV-FVKGYEKGQPDEELK 483

Query: 230 PNQIQKKKIWEMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANIS 279
           P    KKK++E +Q   K    CIA        T  G ++  SLK  NIS
Sbjct: 484 P----KKKVFEKLQADFKISEECIAQWKQTNFMTKLGSISCKSLKGGNIS 528

[Close]

BLAST of CcUC04G060990 vs. ExPASy Swiss-Prot
Match: Q91WQ3 (Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3)

HSP 1 Score: 142.9 bits (359), Expect = 5.5e-33
Identity = 81/170 (47.65%), Postives = 106/170 (62.35%), Query Frame = 0


Query: 110 VADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVL 169
           +   LDIRVG+I+   +H +ADSLYVE++DVGE EPR + SGLV+++P ++LQDR V+VL
Sbjct: 364 IPSRLDIRVGKILSVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVL 423

Query: 170 TNLKPRNMRGIKSCGMLMAAS-DSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAT 229
            NLKP+ MRG+ S GML+ AS + +   VE L PP GS PGER+ F    EKG   +   
Sbjct: 424 CNLKPQKMRGVDSQGMLLCASVEGVSRQVEPLDPPAGSAPGERV-FVQGYEKGQPDEELK 483

Query: 230 PNQIQKKKIWEMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANIS 279
           P    KKK++E +Q   K    CIA        T  G V+  SLK  NIS
Sbjct: 484 P----KKKVFEKLQADFKISEECIAQWKQTNFMTKLGFVSCKSLKGGNIS 528

[Close]

BLAST of CcUC04G060990 vs. ExPASy Swiss-Prot
Match: P54577 (Tyrosine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=YARS1 PE=1 SV=4)

HSP 1 Score: 142.5 bits (358), Expect = 7.1e-33
Identity = 80/170 (47.06%), Postives = 107/170 (62.94%), Query Frame = 0


Query: 110 VADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVL 169
           +   LDIRVG+II   +H +ADSLYVE++DVGE EPR + SGLV+++P ++LQDR V+VL
Sbjct: 364 IPSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVL 423

Query: 170 TNLKPRNMRGIKSCGMLMAAS-DSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAT 229
            NLKP+ MRG++S GML+ AS + ++  VE L PP GS PGE + F    EKG   +   
Sbjct: 424 CNLKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHV-FVKGYEKGQPDEELK 483

Query: 230 PNQIQKKKIWEMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANIS 279
           P    KKK++E +Q   K    CIA        T  G ++  SLK  NIS
Sbjct: 484 P----KKKVFEKLQADFKISEECIAQWKQTNFMTKLGSISCKSLKGGNIS 528

[Close]

BLAST of CcUC04G060990 vs. ExPASy Swiss-Prot
Match: Q4KM49 (Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars1 PE=2 SV=3)

HSP 1 Score: 142.5 bits (358), Expect = 7.1e-33
Identity = 80/170 (47.06%), Postives = 106/170 (62.35%), Query Frame = 0


Query: 110 VADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVL 169
           +   LDIRVG+I+   +H +ADSLYVE++DVGE EPR + SGLV+++P ++LQDR V+VL
Sbjct: 364 IPSRLDIRVGKILSVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVL 423

Query: 170 TNLKPRNMRGIKSCGMLMAAS-DSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAT 229
            NLKP+ MRG+ S GML+ AS + +   VE L PP GS PGER+ F    EKG   +   
Sbjct: 424 CNLKPQKMRGVDSQGMLLCASVEGVSRQVEPLDPPAGSAPGERV-FVQGYEKGQPDEELK 483

Query: 230 PNQIQKKKIWEMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANIS 279
           P    KKK++E +Q   K    C+A        T  G V+  SLK  NIS
Sbjct: 484 P----KKKVFEKLQADFKISDDCVAQWKQTNFMTKLGFVSCKSLKGGNIS 528

[Close]

BLAST of CcUC04G060990 vs. ExPASy TrEMBL
Match: A0A1S3BN57 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491385 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 9.4e-129
Identity = 243/280 (86.79%), Postives = 255/280 (91.07%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFNHCRPFFAVRPTFSNFTPPLGKDNVA 60
           MASLPTAAAIANV KTA+N R FFFFSSSL+HNF+HC PFFA+  TFS FTP L KDNVA
Sbjct: 1   MASLPTAAAIANVAKTATNARFFFFFSSSLSHNFDHCIPFFALPRTFSRFTPSLRKDNVA 60

Query: 61  TRGRISRNGARFPFSLCTIASTESVTSDAAIASSSTSLDK-DDDQEKKIKDVADTLDIRV 120
             GRISRNG RFPFS CT ASTE VTSDA+IASSSTS+DK DDD EK IK+ AD LDIRV
Sbjct: 61  --GRISRNGTRFPFSFCTTASTEPVTSDASIASSSTSMDKGDDDPEKNIKNAADMLDIRV 120

Query: 121 GRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTNLKPRNMR 180
           GRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRV+VL NLKPRNMR
Sbjct: 121 GRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVVVLANLKPRNMR 180

Query: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIW 240
           GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA+PNQIQKKKIW
Sbjct: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAASPNQIQKKKIW 240

Query: 241 EMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANIS 279
           EMVQPHLKTD CC AVLGSHP+RTSTGVVTSTSLK+ANIS
Sbjct: 241 EMVQPHLKTDGCCTAVLGSHPLRTSTGVVTSTSLKHANIS 278

[Close]

BLAST of CcUC04G060990 vs. ExPASy TrEMBL
Match: A0A0A0L299 (tRNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G438550 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.3e-125
Identity = 241/280 (86.07%), Postives = 248/280 (88.57%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFNHCRPFFAVRPTFSNFTPPLGKDNVA 60
           MASLPTAA IANV KTA+N R FFFFSSSL+HNF+H  P FA   TFS FTPPL  DNVA
Sbjct: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60

Query: 61  TRGRISRNGARFPFSLCTIASTESVTSDAAIASSSTSLDKDDDQ-EKKIKDVADTLDIRV 120
             GRISRNG +FPFS CT ASTE VTSDA+IA SSTSLDKDDD  EK IKD AD LDIRV
Sbjct: 61  --GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRV 120

Query: 121 GRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTNLKPRNMR 180
           GRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRVIVL NLKPRNMR
Sbjct: 121 GRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMR 180

Query: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIW 240
           GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA PNQIQKKKIW
Sbjct: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQKKKIW 240

Query: 241 EMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANIS 279
           EMVQPHLKTD CC AVLGSHPMRTS GVVTSTSLK+ANIS
Sbjct: 241 EMVQPHLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS 278

[Close]

BLAST of CcUC04G060990 vs. ExPASy TrEMBL
Match: A0A6J1EB98 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111432547 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.2e-120
Identity = 236/291 (81.10%), Postives = 247/291 (84.88%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKTASNRRFFF----FSSSLAHNFNHCRPFFAVRPTFSNFTPPLGKD 60
           MASLPTAAAIANVTKTA+NRR  F    FSSSL+H F H RPFFA+RPTF  FTPPL KD
Sbjct: 3   MASLPTAAAIANVTKTATNRRLLFFSSSFSSSLSHKFGHSRPFFALRPTFPCFTPPLHKD 62

Query: 61  NVA----TRGRISRNGARFPFSLCTIASTESVTSDAAIASSSTSLDKD-----DDQEKKI 120
            VA    TRGRISRNGARFPFS CT +STE  TSDA IASSS+S DKD     DD EKKI
Sbjct: 63  KVASIQETRGRISRNGARFPFSFCTASSTEPATSDAPIASSSSSSDKDDGNDNDDPEKKI 122

Query: 121 KDVADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVI 180
           KD AD LDIRVGRIIKAWRH EADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRV+
Sbjct: 123 KDAADMLDIRVGRIIKAWRHHEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVV 182

Query: 181 VLTNLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA 240
           VL NLKPRNMRGIKS GMLMAASDSLHENVELLLPPE SIPGERIWFGS+D+K  QPDAA
Sbjct: 183 VLANLKPRNMRGIKSFGMLMAASDSLHENVELLLPPEDSIPGERIWFGSQDDKEKQPDAA 242

Query: 241 TPNQIQKKKIWEMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANIS 279
           T NQIQKKKIWEMVQPHLKTDA   AVLG HPMRTS G+VT+TSLK+ANIS
Sbjct: 243 TANQIQKKKIWEMVQPHLKTDASRTAVLGPHPMRTSAGLVTTTSLKHANIS 293

[Close]

BLAST of CcUC04G060990 vs. ExPASy TrEMBL
Match: A0A6J1HP94 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111466069 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 4.7e-120
Identity = 235/291 (80.76%), Postives = 246/291 (84.54%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKTASNRRFFF----FSSSLAHNFNHCRPFFAVRPTFSNFTPPLGKD 60
           MASLPTAAAIANVTKTA+N R  F    FSSSL H F+H RPFFA+R TF  FTPPL KD
Sbjct: 3   MASLPTAAAIANVTKTATNGRLLFFSSSFSSSLPHKFDHSRPFFALRRTFPCFTPPLHKD 62

Query: 61  NVA----TRGRISRNGARFPFSLCTIASTESVTSDAAIASSSTSLDKD-----DDQEKKI 120
            VA    TRGRISRNGARFPFS CT +STE  TS A IASSS+S DKD     DD EKKI
Sbjct: 63  KVASIQETRGRISRNGARFPFSFCTASSTEPATSGAPIASSSSSSDKDDGNDNDDPEKKI 122

Query: 121 KDVADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVI 180
           KD AD LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRV+
Sbjct: 123 KDAADMLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVV 182

Query: 181 VLTNLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA 240
           VL NLKPRNMRGIKS GMLMAASDS+HENVELLLPPE SIPGERIWFGSED+K  QPDAA
Sbjct: 183 VLANLKPRNMRGIKSSGMLMAASDSMHENVELLLPPEDSIPGERIWFGSEDDKEKQPDAA 242

Query: 241 TPNQIQKKKIWEMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANIS 279
           T NQIQKKKIWEMVQPHLKTDA C AVLG HPMRTS G+VT+TSLK+ANIS
Sbjct: 243 TANQIQKKKIWEMVQPHLKTDASCTAVLGPHPMRTSAGLVTTTSLKHANIS 293

[Close]

BLAST of CcUC04G060990 vs. ExPASy TrEMBL
Match: A0A6J1D7U8 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Momordica charantia OX=3673 GN=LOC111017824 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.5e-105
Identity = 214/282 (75.89%), Postives = 228/282 (80.85%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKTA---SNRRFFFFSSSLAHNFNHCRPFFAVRPTFSNFTPPLGKDN 60
           MAS PTAAAIANVTK A   + R  FF SSS+   F+HCRP    R  F  F+P L   N
Sbjct: 1   MASFPTAAAIANVTKNAGCGTARFLFFSSSSIVSKFDHCRP---QRRAFPLFSPLLHNHN 60

Query: 61  VATRGRISRNGARFPFSLCTIASTESVTSDAAIASSSTSLDKDDDQ-EKKIKDVADTLDI 120
            A  GRISR+ ARFP S CT++S E  TSD AIASSS SL  DDD  +KKIKD A+ LD 
Sbjct: 61  AA--GRISRDCARFPLSFCTVSSAEPATSD-AIASSSASLGTDDDDPDKKIKDAANMLDF 120

Query: 121 RVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTNLKPRN 180
           RVG+IIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPL+QL DRRVIVL NLKPRN
Sbjct: 121 RVGKIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLEQLLDRRVIVLANLKPRN 180

Query: 181 MRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKK 240
           MRGIKSCGMLMAASD+ HENVELLLPPEGSIPGERIWFGSEDEK  QP AATPNQIQKKK
Sbjct: 181 MRGIKSCGMLMAASDASHENVELLLPPEGSIPGERIWFGSEDEKEGQPVAATPNQIQKKK 240

Query: 241 IWEMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANIS 279
            WE VQPHLKTD+CCI VLG HPMRTS G+VTSTSLK ANIS
Sbjct: 241 TWETVQPHLKTDSCCIVVLGPHPMRTSAGLVTSTSLKNANIS 276

[Close]

BLAST of CcUC04G060990 vs. TAIR 10
Match: AT3G59980.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 258.8 bits (660), Expect = 4.9e-69
Identity = 127/215 (59.07%), Postives = 165/215 (76.74%), Query Frame = 0


Query: 66  RNGARFP--FSLCTIASTESVTSDAAIASSSTSLDKDDDQEKKIKDVADTLDIRVGRIIK 125
           RN + +P   + CT A     T     A  S    +   +E+ +K+ A+ LDI+VGRI+K
Sbjct: 62  RNRSSWPRVATFCTAAPDAGTT---VSADESEKKSESQKEEENVKETANLLDIKVGRIVK 121

Query: 126 AWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTNLKPRNMRGIKSC 185
           AW+H+EADSLYVEEVD+GE EPR+ICSGLVKY+PLD LQ   V+VL NLKPRNMRG+KSC
Sbjct: 122 AWQHEEADSLYVEEVDIGEAEPRIICSGLVKYVPLDLLQGASVVVLANLKPRNMRGVKSC 181

Query: 186 GMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQP 245
           GML+AASD+ HENVELL+PPEGS+PG+R+WFG+E++    P+ A PN++QKKK+WE+VQP
Sbjct: 182 GMLLAASDAAHENVELLVPPEGSVPGDRVWFGNEEDLEQLPEPAPPNKVQKKKMWELVQP 241

Query: 246 HLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANIS 279
            LKTDA  +++L  H MRTS+G+VTS SL+ ANIS
Sbjct: 242 LLKTDASGVSMLKEHLMRTSSGLVTSKSLRNANIS 273

[Close]

BLAST of CcUC04G060990 vs. TAIR 10
Match: AT4G13780.1 (methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative )

HSP 1 Score: 130.6 bits (327), Expect = 2.0e-30
Identity = 76/164 (46.34%), Postives = 99/164 (60.37%), Query Frame = 0


Query: 114 LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTNLK 173
           LDIRVG+I+KA +H +AD+LYVEE+DVG  E R + SGLVKYIPL+++Q+R V VL NLK
Sbjct: 639 LDIRVGKIVKAEKHPKADALYVEEIDVGGGEIRTVVSGLVKYIPLEEMQNRMVCVLCNLK 698

Query: 174 PRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQ 233
           P  MR I S  M++AAS S    VEL+ PP+ +  GER+ F   +  G   D   P    
Sbjct: 699 PAKMRDIVSQAMVLAASSSDGSKVELVEPPKTANIGERVTFPGFE--GEPDDVLNP---- 758

Query: 234 KKKIWEMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKYANI 278
           KKK+WE +   L T    +A     P  TS GV   +S+    I
Sbjct: 759 KKKVWETLLVDLNTKENLVACYKDVPFTTSAGVCKVSSISNGTI 796

[Close]

BLAST of CcUC04G060990 vs. TAIR 10
Match: AT2G40660.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 115.2 bits (287), Expect = 8.7e-26
Identity = 67/157 (42.68%), Postives = 90/157 (57.32%), Query Frame = 0


Query: 114 LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTNLK 173
           L+I+VG I KAW+H  ADSL VEE+DVGE + R + SGL K+   + L +R V ++TN+K
Sbjct: 232 LNIQVGLIRKAWKHPSADSLLVEEIDVGEDKVRQVVSGLAKFCSPEDLTNRLVALITNVK 291

Query: 174 PRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQ 233
           P  +R + S G+++ AS   H  VE LLPP G+ PGER+ F   +  G   D   P    
Sbjct: 292 PGKLRDVMSQGLVLCASSEDHSVVEPLLPPAGAKPGERVSFSGIE--GKPEDVLNP---- 351

Query: 234 KKKIWEMVQPHLKTDACCIAVLGSHPMRTSTGVVTST 271
           KKK  E + P L TD   +A        TS G  TS+
Sbjct: 352 KKKQLEKITPGLYTDENGVATYKGIQFMTSAGPCTSS 382

The following BLAST results are available for this feature:

BLAST of CcUC04G060990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449535.1	1.9e-128	86.79	PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1...	[more]
XP_038882664.1	5.7e-128	85.76	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Benincasa...	[more]
XP_004144343.1	2.6e-125	86.07	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1...	[more]
KAG6595713.1	3.2e-123	82.13	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, partial [...	[more]
KAG7027675.1	3.2e-123	82.13	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, partial [...	[more]

BLAST of CcUC04G060990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O54873	1.7e-34	47.95	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cricetu...	[more]
Q5R8T5	1.9e-33	47.65	Tyrosine--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=YARS1 PE=2 SV=3	[more]
Q91WQ3	5.5e-33	47.65	Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3	[more]
P54577	7.1e-33	47.06	Tyrosine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=YARS1 PE=1 SV=4	[more]
Q4KM49	7.1e-33	47.06	Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars1 PE=2 S...	[more]

BLAST of CcUC04G060990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BN57	9.4e-129	86.79	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1...	[more]
A0A0A0L299	1.3e-125	86.07	tRNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G43855...	[more]
A0A6J1EB98	1.2e-120	81.10	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cucurbi...	[more]
A0A6J1HP94	4.7e-120	80.76	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cucurbi...	[more]
A0A6J1D7U8	1.5e-105	75.89	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Momordi...	[more]

BLAST of CcUC04G060990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59980.1	4.9e-69	59.07	Nucleic acid-binding, OB-fold-like protein	[more]
AT4G13780.1	2.0e-30	46.34	methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS,...	[more]
AT2G40660.1	8.7e-26	42.68	Nucleic acid-binding, OB-fold-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.140		coord: 109..278 e-value: 5.4E-55 score: 187.8
None	No IPR available	PANTHER	PTHR11586	TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER	coord: 96..278
None	No IPR available	PANTHER	PTHR11586:SF39	TYROSINE--TRNA LIGASE, CYTOPLASMIC	coord: 96..278
None	No IPR available	CDD	cd02799	tRNA_bind_EMAP-II_like	coord: 114..213 e-value: 6.20182E-63 score: 191.673
IPR002547	tRNA-binding domain	PFAM	PF01588	tRNA_bind	coord: 116..210 e-value: 5.5E-27 score: 93.7
IPR002547	tRNA-binding domain	PROSITE	PS50886	TRBD	coord: 110..213 score: 30.191917
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 113..276

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G060990.1	CcUC04G060990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0000049	tRNA binding