CcUC04G060920 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G060920
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr04: 7392109 .. 7394581 (+)
RNA-Seq Expression	CcUC04G060920
Synteny	CcUC04G060920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCGTGAGAGTTTCGTTTTAATAATTTCTTTTTTTTCCAAATTCAGGGCATTCGTACGAAAACTACTATCTTTTGTCCCAAACATAAACTTGGAAAGGGGATAATTTTGTCAATTGCCCAATTAACTCTCCTCCTTTTCGTGTATCAGCCCCTCGTTTGGTTCAATCAACCGCCGCACCCTCCCACCTTCAGCCTTCCTACTCCGGCCATCCACGCGAGGCCTCTTGCGAGTCGCCAACGGCGGTGTAAGGCTAGGGGCTCTCCCTCTTCGTGCGACCCACGAAAAACCCGCGAGGTTTATTCTCTGGGGAGCAGCTGCGAAACCCTGCCACGTCACCAATTTCGGCAACAGCGCCTTGCGAACAGGGACGCTTCTACCCAAGAACCTAACTCGTGGCGGTTCCCGGCGACGCCTCCGTGTACAAACGGCGGTTTCTTCTTCCTTATTCCAACGACCACACAGCAGCAGCAGCAAACCAACGTGACGTACGCGATTTCGGCAGTTTACAGTGCTTTTTCCTCATTCCGACAAGTTTTGGCTCTGACCCACTCCCACGGACCTTAGATTAGCGTTACTCACTCCCTAGCGGCTTCAAATCTACAGGTTTAAGCCTATTCAAACGCTAGTTCTAGGGCTGTTTTACAGCGTTCAGTAGGTACTAGCGTGCTTTAGTTCCTTACATACTTGATTTAAGTGTTGTGCATTGGTCTCTAACCCTTGGGCACTCTTGGCTTGTTTGGGATTGATTCGGATATTTGAATTAAGGTAAATTAACGTTTAAGATTGTTTTGGTCAAGAATTTTCCTTCTGTACGCCGTTTTGGCTTCAGCTAAGGTTTTCAACGAAGTTATAATCTTAGAATCTTGTTCTTATTGTTTTAGGGGTATATTGAATAGTTTAGTAGCGGTTTAGGATGTTTAGTAAGTAGAATTTTATTTTTTGGATCTGTTTGTTGTGTGTGCATGCTTTGTGTTTTACTTATTTGATTATAATATGCGTATTTTTATGAACGGTAGTGTTTTAGGATGAGTTTTGAGCTGATTTTGGATGTTAAGCGTGATGAGTTGTTGAGTGCATTGTGGTGATGAACATACTGATTTGTGGAGTTTATCCAGAAAAGTTTAACTTCTTTTAATCTGTGAGCATGTTGTGTAAATGTGATAATAAAGTATAGTCTAGAACGCATGTTTTAGGTTGTGCATGTCTGGATTTCTACGAGCCTATTTAGTGAGAAGGGTCAGGGTCAAGTGAATGTCAAAGCCTTGGGTTAAATGGTTGAGGGTGGATATGCCAATACATTGGACAAAGAGGAGCATCGAGGCCTTGGGTTAAATGGTCAAGGGTCAGTTTGATAATCTTGAGGCAAGTGTTTGGGCCTTGAGCTAAATAGTCCATGGTCAATGTGCTAAGGAGAACAATGGAATATCATGGGCTCTAGTTAAATTGTTGAGGGCTGGTATTGTTCTAAGGCAAGTAAGTGAGTATCAAGGCTACGGGTGAAATGGTCAAGGGTTGTAATGTCACTATTGGGTGTTGAGGTCTTGAGTTAGATGGTTGGGGGTTGATACACCAATATTAGATAAAGAGGACCATTGAGACCTTGGGTTAGATGGTCAAAGGTGTGTGTGATGAGTCTGAAGACAAGTGTTGAGTGGTCAAGGGTCAATTCGTTGTCAATTGTTGTGTGGCCTTGGGTTAAATGGTCATGGGTCAAACATTGAGTTCTATAGAGAAATGTTGAGAGAAATTAGCTTGTGAAGAGCTAACAATCGTGAGGACTCAGTAGAATGTGAGTGAGCCCGTTGACCTTGAGTTAGAGGATGGGCTTGTTAGACTTAGAGTACTAATAAGGGATATTTTGGGAATATTAGTAGGATAGTAGTAAGGGCATAGTGGTAATTAGATAGTGGTTGATTGGTTATAAATAAGGAAGGTGGGCACCTTCGGAGGGGAGATCATTTTGGTAAGTCAATCCATAGTAGGTTGATAATGCAATATAATTATCTATAGTATTTTCTTGTAATTTTTGTGTTTGGGTTCCTAAAAATTTGGTATCAGGGCACGCTCATCATGATATTAGAGAACTTGTTGGTGGTATAGAGGAATTTGGACTCAATGCGTTGAGGGCTTAAAAAATATTCAACCAACGCTAAAAGAAATGGAGAAGGGTTTGAGGACTTAATCACCAACGAATGGAAAGAGACCAGTGATAGTAATCAATGCAACGAAAAGGATAGAGATTAAGGAAAACCAAATTGAATCAAAGAAGAGCAACAAAATTGTTTAGAAACCATTAGATCACAAGCAGGGTTGAAGAATGGCAAGACGACGTTGTTCTTACTCCAGGGAAAATCAATCAACAAGGCGAGAGAGGAGGAAAGAGGAATCATTGATGGGCACATGTTCGGAAAAGCAACCAGGCAAGCACAGAGAGAACTCAGTGGTGGCCCAAAGAGGGAAAGGCGATGA

mRNA sequence

ATGTGCGGCATTCGTACGAAAACTACTATCTTTTGTCCCAAACATAAACTTGGAAAGGGGATAATTTTGTCAATTGCCCAATTAACTCTCCTCCTTTTCGTGTATCAGCCCCTCGTTTGGTTCAATCAACCGCCGCACCCTCCCACCTTCAGCCTTCCTACTCCGGCCATCCACGCGAGGCCTCTTGCGAGTCGCCAACGGCGGTGTAAGGCTAGGGGCTCTCCCTCTTCGTGCGACCCACGAAAAACCCGCGAGGTTTATTCTCTGGGGAGCAGCTGCGAAACCCTGCCACGTCACCAATTTCGGCAACAGCGCCTTGCGAACAGGGACGCTTCTACCCAAGAACCTAACTCGTGGCGGTTCCCGGCGACGCCTCCGTGTACAAACGGCGAAACCATTAGATCACAAGCAGGGTTGAAGAATGGCAAGACGACGTTGTTCTTACTCCAGGGAAAATCAATCAACAAGGCGAGAGAGGAGGAAAGAGGAATCATTGATGGGCACATGTTCGGAAAAGCAACCAGGCAAGCACAGAGAGAACTCAGTGGTGGCCCAAAGAGGGAAAGGCGATGA

Coding sequence (CDS)

ATGTGCGGCATTCGTACGAAAACTACTATCTTTTGTCCCAAACATAAACTTGGAAAGGGGATAATTTTGTCAATTGCCCAATTAACTCTCCTCCTTTTCGTGTATCAGCCCCTCGTTTGGTTCAATCAACCGCCGCACCCTCCCACCTTCAGCCTTCCTACTCCGGCCATCCACGCGAGGCCTCTTGCGAGTCGCCAACGGCGGTGTAAGGCTAGGGGCTCTCCCTCTTCGTGCGACCCACGAAAAACCCGCGAGGTTTATTCTCTGGGGAGCAGCTGCGAAACCCTGCCACGTCACCAATTTCGGCAACAGCGCCTTGCGAACAGGGACGCTTCTACCCAAGAACCTAACTCGTGGCGGTTCCCGGCGACGCCTCCGTGTACAAACGGCGAAACCATTAGATCACAAGCAGGGTTGAAGAATGGCAAGACGACGTTGTTCTTACTCCAGGGAAAATCAATCAACAAGGCGAGAGAGGAGGAAAGAGGAATCATTGATGGGCACATGTTCGGAAAAGCAACCAGGCAAGCACAGAGAGAACTCAGTGGTGGCCCAAAGAGGGAAAGGCGATGA

Protein sequence

MCGIRTKTTIFCPKHKLGKGIILSIAQLTLLLFVYQPLVWFNQPPHPPTFSLPTPAIHARPLASRQRRCKARGSPSSCDPRKTREVYSLGSSCETLPRHQFRQQRLANRDASTQEPNSWRFPATPPCTNGETIRSQAGLKNGKTTLFLLQGKSINKAREEERGIIDGHMFGKATRQAQRELSGGPKRERR

Homology

The following BLAST results are available for this feature:

BLAST of CcUC04G060920 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC04G060920 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC04G060920 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC04G060920 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G060920.1	CcUC04G060920.1	mRNA