CcUC03G058820 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC03G058820
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptioncalmodulin-binding protein 60 B-like
LocationCicolChr03: 30696689 .. 30700987 (+)
RNA-Seq ExpressionCcUC03G058820
SyntenyCcUC03G058820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCAAAGAGGCAAAAAGAGGGAGTTTACAAACCTTCACAAGGATGAACAAGATGATCAACCTTCTCAAACTAACCCTAAAAGAACCTCCAACTCTATTTCTCCTCCTAGGTTTGTTTGTTTGTCTTTTTTTTTTTTTTTCTTTTTTTCTTTTTTTCTTTTGTGATCATTATTACAAGGAAAAGAAACATGGGTTGGTTTTGTTTTTCCTAGTTATGAAGCTGATTCTGAGATTGTACCAAAGATTTTATCTCCTGAATTATGGTCTCAAATGGAAGCTTTTCTTTGTCAAGTGGTACTTTTATTCTCCTTTTCCATTCCCTCTCTACCTTACGTCTTAATTTTCACTATCAATATTCAGACTATTTTATCATTATATGCATATATTTTTCTTCTTAGGTTAATGAGGTATTTGATAGCAAGTTTATTTCTCACTTTCAGTTCCTTCCACCATCTTCAAGGTATTTTTAAGAAGATGATCAATTACAATTACTTCTCATGCTTTGCATTCACACACACTCCTAATTATTAATCTCTTTGCACTGTTTTGTCTTGTTTGCAGCAATATCCAACTTAACAATGATCAAAATGAAGAAGCAACCAAGTTTGAGTTACGTTTCCTCAACCAAATTTCTTCCACTATTTTTACCAACAAGGAGATAGAAGCCAAGAATGGCGACGCATTACAAATTGCACTCATTGATGCCAATAACAACAATGCCATCGTCTCCGTCGGTCCTTTGTCGATAGCTCAAATTGAGGTCGTTGTCCTCGATGGAGACTCCGACGAGTTCATCAATCAAAGCATTTTGTCTCAAAGGGATGGAAAAAGACCATTAATTGTGGGTAATGATTTGAAACTTTGTCTTAAAAATGGAGTTGGGTTCATCAAGAGTTTGAGTTTCACTGACAACTCCAGCTGGTTGAGATCTAAGAATTTTCGGTTGGGAATAAGAATTGTGAAAGATAAAAGTTCAGCAAAGTTTCCAAGAATTGGAGAAGCTATATCTCAACCATTCAGAGTCTTAGATCATCGAGGAGAAGGTAATCCACCGCTTTTGTAGAACTTAGACCTTCCTTCTTGAGATCTCTCTCAAACCCTAATTTATTCACCAATATATTGCTCAACTTTCTTCTTTCCCAATTCCCTCGGTTTATAACTGAATACCGTAACACAATATCTATATCTAATTATACAGTAACATACCATTAATACTGCCTAAGAACATCCATATCACCCTAGTTTTGTTGATTTTTTTTCTTTTCTTTTCTTTTCTTTCTAATATAGCTGGTTTCCTTCAATTCTTTAGTGAACAAGAAGCACCACCCTCCACTTAGGGAAGATGAGGTATGGCGGTTGGAAGGAATTGGAAGAAATGGTGTTTATCATAAAATCTTGTCTTCTCGAGGCATCAAAACAGTTGATGATTTCTTAAAAACATATGATGAAAAAGGTCCTCTTTACTTGAGAAAGGTAAACAAAAATTAAAGAGAGTTCTCACCATTCTTCATCACTATCTAGTTTATTTATAAAATGATCTAAGACTTGTTAATTTTCCCCCCCTTTTTCATGCATTGAAGTTACTTGGTAAGAATGTCTCAAACAAGACATGGAATGCAATGCTCACTAATGCTTTGGAATGTATCCCTCTTCTCAACTTTCCTCCAAGCTTTGAGGTTCGACTCTCCTTTATAACAAAAACCCGTTTAGATTGACTTTCTAATTGCTAAAAAAAATATTCAGGAAGTCAATCCAAACAAACACTTAATTTGTGTTGATATACCGAAATATTTCTCCTTTTCTCTAAACCTTTTTCTTATCTATATATATTACATTTGTTTGGATATGAAGCCACGGGAAGTGAAGCTTTTGAAGGAAACTTAGAGCAAAGGAATTCAAATGATTGGAATACAATTGTAGTAGACCTTCCATAAAGAATAATGGGAGCCCATGCGAGGAGCTTCAACTACTTCATACAACTACAATCACTAAGTGAAAGATGCAAATGCATGTGCAACCAATAGTACCAAACGACAAACCATTCTCTCCAAGCTATTTATATTTAGATTTCATGTTTTTTTTTAATATAATTATTGTGGGGGGTATATATTAGAGGCTGAAATCGACACGTTTGATTAAAGATATGCATTGAGAATTTGTTATCTAATGCTTTATTTTACTTGGTCGTTACACGACTTACAATATAATATCAAAACTTTACCATTATTCCTACTATGCATTTACAATATATCCATTGTTTGTGTGCCTAATCCAATCTAATTTTACATACCATTACAATATCTTAGATATTTAATTAAATGCAATTTGAATCATATTCAATTGTTTATTTCTCTTATAAACTATAGTTTTAATATAAATCTCATTTATATTAAATTTTCACCTATAGTTTTATAGTTTTAATATGAATCTAATTCATATTAAATTATTAACTAATAGTTATAATATGAATATCATTCATATTAATTTAATATTTAATATTTGAATCATATTCAAATATGTTAAATCTCCAGTTTAATTTTGAATCTTATTCAAATTTAACTTTATATTATAATGGATTTATATACTTTAATTAATTTGAACAATTCAAATTCTTTCAAAACTAATGGTCCTTGTTTACCTGTTGCAAGCTAATAAGAGACCTAGTAAACCTACATATTAGAAACTTGAATGATTCGAATTAATTAATTAAATTTTTTAATTAAATTAACCAACATTCATTTTTATATCAAATTGGAAGAACTTGACTAATTCCATCATTTTATAACAAATTAAGAAACGCCCGTGTTCCATAAATGGAAAACCGTTTTTTAATTTCTTAGCATTATTTTTAAAAAAAAATAAAAATGATAACAAAAAAACTCAATAAATATCAAACATATCTGATTTTTAAAAACTATATATATATACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTCTCTAATGAAAGTTCTTAAGTGTTAGTTTTCAGTGTGAAGATTGTCTGAACTTATTTTGTATTTTTCTTGGTGATTTTGGTTCAAATGGCAGCAACATCTCAGAATTAAATTTTAGTGTTTGAGAAACCTAATAAATGATTCAAAGTAGAAAGATAGTAAAAACCAAGATATATCTTTGAATTTAAATTTTTAGTTAAATTTTATATGGATATGTCAATAATATGCTATATTGTTGCAAATGTATGTTTAAAATTGTTAAGTATGTCATTTAGATTAAAATCTATCATAGATTGCAAATCATACTCTGAAGTTGTATAAATCAATTAGTGTTTATTGTTTTTATCTTGCATTTGTAGTTATATATATTTTAAATTAATAAAATTTATAAACTAATGAGCATATATTACTTTCATATATCAAACATATCCTACACTTGCATTAGGAATTTGAGAAAGAAAGTTTGACACATTGTTATGAACAAAACGAATGAGCATATATTTCTATAAAAGATCATGAAATTCGACCAAATAATTTAACTTTGAGTGGTTAAAGGTATATTTCGGAGTGATTTTTTTTTTTTTTTTCAGGTTCAAATATTTTCATCATGTTGGCCAGTTTTTTTTTTTTTTCAGGTTCAAATATTTTCATCATGTTGGCCAGTTTCAAAAATTATATGAAGATAGTTATTAACTTTTATATGCATAAAGTTAAAATATAA

mRNA sequence

ATGGATCAAAGAGGCAAAAAGAGGGAGTTTACAAACCTTCACAAGGATGAACAAGATGATCAACCTTCTCAAACTAACCCTAAAAGAACCTCCAACTCTATTTCTCCTCCTAGTTATGAAGCTGATTCTGAGATTGTACCAAAGATTTTATCTCCTGAATTATGGTCTCAAATGGAAGCTTTTCTTTGTCAAGTGGTACTTTTATTCTCCTTTTCCATTCCCTCTCTACCTTACGTCTTAATTTTCACTATCAATATTCAGACTATTTTATCATTATATGCATATATTTTTCTTCTTAGGTTAATGAGGTATTTGATAGCAAGTTTATTTCTCACTTTCAGTTCCTTCCACCATCTTCAAGGTTCAAATATTTTCATCATGTTGGCCAGTTTCAAAAATTATATGAAGATAGTTATTAACTTTTATATGCATAAAGTTAAAATATAA

Coding sequence (CDS)

ATGGATCAAAGAGGCAAAAAGAGGGAGTTTACAAACCTTCACAAGGATGAACAAGATGATCAACCTTCTCAAACTAACCCTAAAAGAACCTCCAACTCTATTTCTCCTCCTAGTTATGAAGCTGATTCTGAGATTGTACCAAAGATTTTATCTCCTGAATTATGGTCTCAAATGGAAGCTTTTCTTTGTCAAGTGGTACTTTTATTCTCCTTTTCCATTCCCTCTCTACCTTACGTCTTAATTTTCACTATCAATATTCAGACTATTTTATCATTATATGCATATATTTTTCTTCTTAGGTTAATGAGGTATTTGATAGCAAGTTTATTTCTCACTTTCAGTTCCTTCCACCATCTTCAAGGTTCAAATATTTTCATCATGTTGGCCAGTTTCAAAAATTATATGAAGATAGTTATTAACTTTTATATGCATAAAGTTAAAATATAA

Protein sequence

MDQRGKKREFTNLHKDEQDDQPSQTNPKRTSNSISPPSYEADSEIVPKILSPELWSQMEAFLCQVVLLFSFSIPSLPYVLIFTINIQTILSLYAYIFLLRLMRYLIASLFLTFSSFHHLQGSNIFIMLASFKNYMKIVINFYMHKVKI
Homology
[Close]
BLAST of CcUC03G058820 vs. NCBI nr
Match: XP_008451138.1 (PREDICTED: calmodulin-binding protein 60 B-like [Cucumis melo])

HSP 1 Score: 74.3 bits (181), Expect = 9.7e-10
Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 3  QRGKKREFTNLHKDEQDDQPSQTNPKRTSNSISPPSYE-ADSEIVPKILSPELWSQMEAF 62
          +R KKR+F NLH +E D +PS+T+PKRTSNSI  P  E A  +IV  ILSP+LWSQMEA 
Sbjct: 2  ERDKKRDFQNLHDNEHDYRPSETSPKRTSNSIPTPGSEVASDDIVANILSPQLWSQMEAI 61

Query: 63 LCQVV 67
          LC++V
Sbjct: 62 LCRLV 66

[Close]
BLAST of CcUC03G058820 vs. NCBI nr
Match: KAA0050930.1 (calmodulin-binding protein 60 B-like [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 6.1e-04
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 0 

Query: 3  QRGKKREFTNLHKDEQDDQPSQTNPKRTSNSISPPSYEADSEIVPKILSPELWSQMEAFL 62
          +R KKR+F NLH +E D +PS+T+PKRTSNSI  P  E + +I+  ILS +L   M A +
Sbjct: 2  ERDKKRDFQNLHDNEHDYRPSETSPKRTSNSIPTPGSEVEYDIIAHILSLQLLPHMRAAI 61

Query: 63 CQVV 67
            +V
Sbjct: 62 RPMV 65

[Close]
BLAST of CcUC03G058820 vs. ExPASy TrEMBL
Match: A0A1S3BQ83 (calmodulin-binding protein 60 B-like OS=Cucumis melo OX=3656 GN=LOC103492515 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.7e-10
Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 3  QRGKKREFTNLHKDEQDDQPSQTNPKRTSNSISPPSYE-ADSEIVPKILSPELWSQMEAF 62
          +R KKR+F NLH +E D +PS+T+PKRTSNSI  P  E A  +IV  ILSP+LWSQMEA 
Sbjct: 2  ERDKKRDFQNLHDNEHDYRPSETSPKRTSNSIPTPGSEVASDDIVANILSPQLWSQMEAI 61

Query: 63 LCQVV 67
          LC++V
Sbjct: 62 LCRLV 66

[Close]
BLAST of CcUC03G058820 vs. ExPASy TrEMBL
Match: A0A5A7U6W5 (Calmodulin-binding protein 60 B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold761G00560 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.9e-04
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 0 

Query: 3  QRGKKREFTNLHKDEQDDQPSQTNPKRTSNSISPPSYEADSEIVPKILSPELWSQMEAFL 62
          +R KKR+F NLH +E D +PS+T+PKRTSNSI  P  E + +I+  ILS +L   M A +
Sbjct: 2  ERDKKRDFQNLHDNEHDYRPSETSPKRTSNSIPTPGSEVEYDIIAHILSLQLLPHMRAAI 61

Query: 63 CQVV 67
            +V
Sbjct: 62 RPMV 65

The following BLAST results are available for this feature:
BLAST of CcUC03G058820 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008451138.19.7e-1061.54PREDICTED: calmodulin-binding protein 60 B-like [Cucumis melo][more]
KAA0050930.16.1e-0448.44calmodulin-binding protein 60 B-like [Cucumis melo var. makuwa][more]
BLAST of CcUC03G058820 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC03G058820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BQ834.7e-1061.54calmodulin-binding protein 60 B-like OS=Cucumis melo OX=3656 GN=LOC103492515 PE=... [more]
A0A5A7U6W52.9e-0448.44Calmodulin-binding protein 60 B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
BLAST of CcUC03G058820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..39

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC03G058820.1CcUC03G058820.1mRNA