CcUC03G057900 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATACATCATGATATTTTATCAACATATTTGTGATACAAACAAAATTCTCAATATCAAAATCCATATTTTAATCAAAAGTGCTCACAGCTTGAAGTTTCTTGTAAGATTATGCTTTATTTCATCCGAATTTTGAAAGTACAATCTCGTTGAAGCATTTTAACAAACAGTTTGAAGGCGATATGAAGAACAAGAAAGAAACTGCTAACAGTTCCATCTGAAAATCACACCGGCAGCAAAGCAATTACGAGATTCCGATGAAAATCTTTGCAATTACTGACCTGACGAGCAGCGCCGAAGCATCGAACGCCGTCGGGCTTGCCTTGCGATTCCTTGAGGAGGAAGAGAGCCGCTCGGTCATCGCCTTTGGCTAACTCTCTGTCGATTTGCTCGAGCACTTGTCGCCGCCGGAGACCGACCTCCGATGAACAATTCCAGATTCCGGTCGCTCGAATACATGGACGGCAACGTAAACCTGCATACTGCATTGAACTTCTTTAATCCGAAGCAATCGCACAGGAGGAGAATTTATTGTAAGAAATCTCAAGACGTTTTGTCTGGTTACTATTCTGAAGTTCGCAATAGTTTTCGACCTCACACTCACGGCTATGGATAATTTGAGAATAATTTGGAAATTCCAGAAGCTGAATTGAAAACGACGTCGTATATTCTAAAAAATTGTCTCCTGGTTGTGGATTAACTTCTTTTTCATTTCTTTCTCGGGAAACGCCAACCGGGAGTGTTATGTAATATGTTCTTCACTACTGCTGATTACGATTTCACTTCCAACCTACAGTTTCATCGGAGGATTCCGGTGACCGGAGACGTCATTTCATCGGTGAAGCGCGGGGAATCTGTTGATGGTGCAGCGAAACGACGTCGAGCTCTGAAGCTTGTGGATCGAGCACTCTCGAAGCGGCAATACAAATCCGCTCTTTCGTTGGTTAAGCAGTTGCAAGGGAAACCCTATGGCCTTCGTGCTTTCGGTGCCGCCAAGCAGGTCATCTCTTTCTTTCTTTCTGTTTGTTTCGAGTTTGAGAGATTCTTCTGTCAAAACATCCATTGATTAGTAATTCTTATCTTCGAAATCATATTGAAAATGGTGTAGATATTCAAGAGGCCTTCAGCAATGGACGAATCAGAGCTCAATAGAAAGGATATTTTATCCCTTCAACCACTAGTGGATTTAATTCTGGATTCAATTCAACAATGTCTTCAGATATCTTTATCTGAGAGGGTACATTCCCTGCTTCTTGTTATGCAAGTTTTCATTTCTGAAGATTTTGGTGTTATTGATGACTCTTCATTTGTGCTTCAAGAACTTCACTCTCTGTTTGTTGTTTTACAGACCTCTGCTGAAAAGCTAGAGAGTTTAATTGCTGAAGGTAGACATTCTTCTCGTTGTGAAGAAGAAGAACACCTCATATGTGCACAAGTGAGCTAAATTTGCTAATTCTTTCATGGATTTTTCCACTGTTGTCATTGAGTTTGCATATATAATTGGAAGTTGAGATTATGCTTGCAGCATGAAGCTGGCCATTTCCTTGTTGGCTATTTGATGGGTGTTCTTCCAAAAGAATATGAGGTGCCAAGCATTCAAGCTCTAAGCCAGAACAGATTTGCTGAAGGAAAAGTTTCATTTGTTGGTTTTGAATTTCTTGGGGAAGTAAGATCATTTTCACGCTGCCTATATCACCTGTTTTCGTCAAGATTCAAACTGGGTTTCTTCGGATCTTTCTTTCTATATTTTTGATCTATAAGGCTTCTTAGAAAATCTAGTCAAGACAATTTTGGGTTTTTACCTTGCTGTTTCAAAGAAATATGATAGATTATCAATGCCTGTTAAGAGCTGATTCTTGCTATTTCTTCCGCTCCTTCTACCCGATTGGTTTAGCATGTGAGATTTTAAAATTCAATATAATCTCATGAAGGTTTATAAATATTCTTATGGCTTTACTTTTACTTTTAAGGTTCACATAATAGATGACCCAAATTTTGGAAGAAAAAATGAGTTTTGCCCTACTTTATAAAAATGAGATTTTTCGATATTTGTTGATGTCAAATTCGGGTTAAATTACCAAAAAAATGACCTTCGCACATGCGAAGAGTAAATTCATAACTTCACAAGATCATGACATCAACAAAAGGTCAATTACCATTGTTTTTAAAAAGTGGGACATTCTTTATTTTTTGACCTCCAAAATGGGTCAACTGTACAATTTTCTCTTACTTTTATCCCTCCATGCAGATTTATTCAGTAAGGATTTTGGGGGGAAATGTTGATGTCAGAAATTTGCATAACAGGGTGAGATTTCTTTCTATTAGGGTTGAATGGTTATTTGATTTCTGGTTATAGAAACAATATCAAACAATTGTTTTTGGTAACATAGAATATGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGTAATTAATTTATTGGGTTATAGCTTATTTTAATGTACCAACCCTGATTTCTAAAGCTTTAATCTATTCTGTATCATTCAGGCAAATAAAGGCAGAATTTCCTCAAAGGTGAACAGTTCACATCTTACTCTACATGCTATTCACTAAAGCCTTCAATGGCTTTCTCTTTGCAGCTTTGATCCATTGGAACATGTTCTTGTAACTCATCCAACCTTTTGAGAAAGACTACGACATTGAAAATTCATGAGTTTTAATGATCTTAAGCTTACATTCTTAAAACTGCATTATAGCCTGTCAAACAAATATTCAATTATCAATGACATTGAAAAAGAATTCATTTTGAAGATGATTTTGTTTTCCTCTGCTGTTTCAGATATTGAACCAGTTTTCATGTGTAGCATTAGGAGGCTTAGTGGCTGAGCTTCTAGTTGCTGGAAATTCTGATGGCCATCTAGCAGATATGCTCAAGGTAAAAGCAAGCAACTTCCTCTTCTTCTTTTCCATTTTGCACTACCTATTATTTCATGGTGTTGTTTGCAACAGCTGGGGAGTGTTCTTACATGGCTTGGCCTTTCCAAGTCTGAAGCTGATCTTCATTTAAAATGGGCTGCAACAAACACGGCATTCATAATGTCCCAGCATTGTGAAACAAGATCAAGACTCGCAGAGGCCATGGTGCTGGGGAAACCGATTGGGCTCTGTATCGACGCAATTGAAAACTGTTTGCAGGGAATGGAGATATGAAAACGAATTTTCGTGATATTTGAATAGCCATGGCCACCACTACTCAGGAGTGATCTGATGAGTTTTTTGGAAAATCAAATGTAGTTGAGTGAAGCAACTGTCTTGGAAGATAGTGCGCGCGACGTGGTCCAAACCATCGAGAAAAAATGTGATCGTCTTGGACGATGAGTCATTCATGAG TATACATCATGATATTTTATCAACATATTTGTGATACAAACAAAATTCTCAATATCAAAATCCATATTTTAATCAAAAGTGCTCACAGCTTGAAGTTTCTTGTAAGATTATGCTTTATTTCATCCGAATTTTGAAAGTACAATCTCGTTGAAGCATTTTAACAAACAGTTTGAAGGCGATATGAAGAACAAGAAAGAAACTGCTAACAGTTCCATCTGAAAATCACACCGGCAGCAAAGCAATTACGAGATTCCGATGAAAATCTTTGCAATTACTGACCTGACGAGCAGCGCCGAAGCATCGAACGCCGTCGGGCTTGCCTTGCGATTCCTTGAGGAGGAAGAGAGCCGCTCGGTCATCGCCTTTGGCTAACTCTCTGTCGATTTGCTCGAGCACTTGTCGCCGCCGGAGACCGACCTCCGATGAACAATTCCAGATTCCGGTCGCTCGAATACATGGACGGCAACGTAAACCTGCATACTGCATTGAACTTCTTTAATCCGAAGCAATCGCACAGGAGGAGAATTTATTGTAAGAAATCTCAAGACGTTTTGTCTGGTTACTATTCTGAAGTTCGCAATAGTTTTCGACCTCACACTCACGGCTATGGATAATTTGAGAATAATTTGGAAATTCCAGAAGCTGAATTGAAAACGACGTCGTATATTCTAAAAAATTGTCTCCTGGTTGTGGATTAACTTCTTTTTCATTTCTTTCTCGGGAAACGCCAACCGGGAGTGTTATGTAATATGTTCTTCACTACTGCTGATTACGATTTCACTTCCAACCTACAGTTTCATCGGAGGATTCCGGTGACCGGAGACGTCATTTCATCGGTGAAGCGCGGGGAATCTGTTGATGGTGCAGCGAAACGACGTCGAGCTCTGAAGCTTGTGGATCGAGCACTCTCGAAGCGGCAATACAAATCCGCTCTTTCGTTGGTTAAGCAGTTGCAAGGGAAACCCTATGGCCTTCGTGCTTTCGGTGCCGCCAAGCAGATATTCAAGAGGCCTTCAGCAATGGACGAATCAGAGCTCAATAGAAAGGATATTTTATCCCTTCAACCACTAGTGGATTTAATTCTGGATTCAATTCAACAATGTCTTCAGATATCTTTATCTGAGAGGGTACATTCCCTGCTTCTTGTTATGCAAGTTTTCATTTCTGAAGATTTTGGTGTTATTGATGACTCTTCATTTGTGCTTCAAGAACTTCACTCTCTGTTTGTTGTTTTACAGACCTCTGCTGAAAAGCTAGAGAGTTTAATTGCTGAAGGTAGACATTCTTCTCGTTGTGAAGAAGAAGAACACCTCATATGTGCACAACATGAAGCTGGCCATTTCCTTGTTGGCTATTTGATGGGTGTTCTTCCAAAAGAATATGAGGTGCCAAGCATTCAAGCTCTAAGCCAGAACAGATTTGCTGAAGGAAAAGTTTCATTTGTTGGTTTTGAATTTCTTGGGGAAATATTGAACCAGTTTTCATGTGTAGCATTAGGAGGCTTAGTGGCTGAGCTTCTAGTTGCTGGAAATTCTGATGGCCATCTAGCAGATATGCTCAAGCTGGGGAGTGTTCTTACATGGCTTGGCCTTTCCAAGTCTGAAGCTGATCTTCATTTAAAATGGGCTGCAACAAACACGGCATTCATAATGTCCCAGCATTGTGAAACAAGATCAAGACTCGCAGAGGCCATGGTGCTGGGGAAACCGATTGGGCTCTGTATCGACGCAATTGAAAACTGTTTGCAGGGAATGGAGATATGAAAACGAATTTTCGTGATATTTGAATAGCCATGGCCACCACTACTCAGGAGTGATCTGATGAGTTTTTTGGAAAATCAAATGTAGTTGAGTGAAGCAACTGTCTTGGAAGATAGTGCGCGCGACGTGGTCCAAACCATCGAGAAAAAATGTGATCGTCTTGGACGATGAGTCATTCATGAG ATGTTCTTCACTACTGCTGATTACGATTTCACTTCCAACCTACAGTTTCATCGGAGGATTCCGGTGACCGGAGACGTCATTTCATCGGTGAAGCGCGGGGAATCTGTTGATGGTGCAGCGAAACGACGTCGAGCTCTGAAGCTTGTGGATCGAGCACTCTCGAAGCGGCAATACAAATCCGCTCTTTCGTTGGTTAAGCAGTTGCAAGGGAAACCCTATGGCCTTCGTGCTTTCGGTGCCGCCAAGCAGATATTCAAGAGGCCTTCAGCAATGGACGAATCAGAGCTCAATAGAAAGGATATTTTATCCCTTCAACCACTAGTGGATTTAATTCTGGATTCAATTCAACAATGTCTTCAGATATCTTTATCTGAGAGGGTACATTCCCTGCTTCTTGTTATGCAAGTTTTCATTTCTGAAGATTTTGGTGTTATTGATGACTCTTCATTTGTGCTTCAAGAACTTCACTCTCTGTTTGTTGTTTTACAGACCTCTGCTGAAAAGCTAGAGAGTTTAATTGCTGAAGGTAGACATTCTTCTCGTTGTGAAGAAGAAGAACACCTCATATGTGCACAACATGAAGCTGGCCATTTCCTTGTTGGCTATTTGATGGGTGTTCTTCCAAAAGAATATGAGGTGCCAAGCATTCAAGCTCTAAGCCAGAACAGATTTGCTGAAGGAAAAGTTTCATTTGTTGGTTTTGAATTTCTTGGGGAAATATTGAACCAGTTTTCATGTGTAGCATTAGGAGGCTTAGTGGCTGAGCTTCTAGTTGCTGGAAATTCTGATGGCCATCTAGCAGATATGCTCAAGCTGGGGAGTGTTCTTACATGGCTTGGCCTTTCCAAGTCTGAAGCTGATCTTCATTTAAAATGGGCTGCAACAAACACGGCATTCATAATGTCCCAGCATTGTGAAACAAGATCAAGACTCGCAGAGGCCATGGTGCTGGGGAAACCGATTGGGCTCTGTATCGACGCAATTGAAAACTGTTTGCAGGGAATGGAGATATGA MFFTTADYDFTSNLQFHRRIPVTGDVISSVKRGESVDGAAKRRRALKLVDRALSKRQYKSALSLVKQLQGKPYGLRAFGAAKQIFKRPSAMDESELNRKDILSLQPLVDLILDSIQQCLQISLSERVHSLLLVMQVFISEDFGVIDDSSFVLQELHSLFVVLQTSAEKLESLIAEGRHSSRCEEEEHLICAQHEAGHFLVGYLMGVLPKEYEVPSIQALSQNRFAEGKVSFVGFEFLGEILNQFSCVALGGLVAELLVAGNSDGHLADMLKLGSVLTWLGLSKSEADLHLKWAATNTAFIMSQHCETRSRLAEAMVLGKPIGLCIDAIENCLQGMEI Homology
BLAST of CcUC03G057900 vs. NCBI nr
Match: XP_038879283.1 (uncharacterized protein LOC120071224 isoform X1 [Benincasa hispida]) HSP 1 Score: 498.4 bits (1282), Expect = 4.7e-137 Identity = 271/365 (74.25%), Postives = 284/365 (77.81%), Query Frame = 0
BLAST of CcUC03G057900 vs. NCBI nr
Match: XP_022968757.1 (uncharacterized protein LOC111467900 isoform X2 [Cucurbita maxima]) HSP 1 Score: 462.6 bits (1189), Expect = 2.9e-126 Identity = 256/352 (72.73%), Postives = 267/352 (75.85%), Query Frame = 0
BLAST of CcUC03G057900 vs. NCBI nr
Match: XP_022968755.1 (uncharacterized protein LOC111467900 isoform X1 [Cucurbita maxima] >XP_022968756.1 uncharacterized protein LOC111467900 isoform X1 [Cucurbita maxima]) HSP 1 Score: 458.0 bits (1177), Expect = 7.1e-125 Identity = 257/371 (69.27%), Postives = 268/371 (72.24%), Query Frame = 0
BLAST of CcUC03G057900 vs. NCBI nr
Match: XP_004135797.2 (uncharacterized protein LOC101213254 isoform X2 [Cucumis sativus]) HSP 1 Score: 449.1 bits (1154), Expect = 3.3e-122 Identity = 249/365 (68.22%), Postives = 265/365 (72.60%), Query Frame = 0
BLAST of CcUC03G057900 vs. NCBI nr
Match: TYK10198.1 (uncharacterized protein E5676_scaffold16G003430 [Cucumis melo var. makuwa]) HSP 1 Score: 448.7 bits (1153), Expect = 4.3e-122 Identity = 240/334 (71.86%), Postives = 259/334 (77.54%), Query Frame = 0
BLAST of CcUC03G057900 vs. ExPASy TrEMBL
Match: A0A6J1HUE1 (uncharacterized protein LOC111467900 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467900 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 1.4e-126 Identity = 256/352 (72.73%), Postives = 267/352 (75.85%), Query Frame = 0
BLAST of CcUC03G057900 vs. ExPASy TrEMBL
Match: A0A6J1HY40 (uncharacterized protein LOC111467900 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467900 PE=4 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 3.4e-125 Identity = 257/371 (69.27%), Postives = 268/371 (72.24%), Query Frame = 0
BLAST of CcUC03G057900 vs. ExPASy TrEMBL
Match: A0A5D3CG48 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003430 PE=4 SV=1) HSP 1 Score: 448.7 bits (1153), Expect = 2.1e-122 Identity = 240/334 (71.86%), Postives = 259/334 (77.54%), Query Frame = 0
BLAST of CcUC03G057900 vs. ExPASy TrEMBL
Match: A0A1S3BP83 (uncharacterized protein LOC103492218 OS=Cucumis melo OX=3656 GN=LOC103492218 PE=4 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 1.8e-118 Identity = 241/362 (66.57%), Postives = 261/362 (72.10%), Query Frame = 0
BLAST of CcUC03G057900 vs. ExPASy TrEMBL
Match: A0A6J1HDU1 (uncharacterized protein LOC111461960 OS=Cucurbita moschata OX=3662 GN=LOC111461960 PE=4 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 2.6e-117 Identity = 248/371 (66.85%), Postives = 258/371 (69.54%), Query Frame = 0
BLAST of CcUC03G057900 vs. TAIR 10
Match: AT5G27290.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 159.1 bits (401), Expect = 6.3e-39 Identity = 116/319 (36.36%), Postives = 176/319 (55.17%), Query Frame = 0
BLAST of CcUC03G057900 vs. TAIR 10
Match: AT1G54680.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27290.1). ) HSP 1 Score: 154.5 bits (389), Expect = 1.6e-37 Identity = 78/173 (45.09%), Postives = 108/173 (62.43%), Query Frame = 0
BLAST of CcUC03G057900 vs. TAIR 10
Match: AT1G54680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27290.1); Has 200 Blast hits to 200 proteins in 57 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). ) HSP 1 Score: 152.5 bits (384), Expect = 5.9e-37 Identity = 78/179 (43.58%), Postives = 108/179 (60.34%), Query Frame = 0
BLAST of CcUC03G057900 vs. TAIR 10
Match: AT1G54680.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 152.5 bits (384), Expect = 5.9e-37 Identity = 78/179 (43.58%), Postives = 108/179 (60.34%), Query Frame = 0
BLAST of CcUC03G057900 vs. TAIR 10
Match: AT5G27290.2 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 199 Blast hits to 194 proteins in 57 species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 105.1 bits (261), Expect = 1.1e-22 Identity = 89/240 (37.08%), Postives = 128/240 (53.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|