CcUC03G055760 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC03G055760
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionThiF domain-containing protein
LocationCicolChr03: 27686963 .. 27687331 (+)
RNA-Seq ExpressionCcUC03G055760
SyntenyCcUC03G055760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACCTGCAGCAAATCCTAAGAAACAATTATGCAAGTACTTAAAGCCCGGCGCGTTGGCGCAAATGCGAGACTCACGAATCAGAGCCAAAAGGAAAAGAGACAAATCGGTGAATCAAATATACCTCTGCCGTACTTCTGCTCTGGAATCGTCTCCGGTTTCCGGTACCGCCGCTCAATCGGAGATTAAGATCGTCGAGGATTTCAGTGTCGGTCCTCCGTTGTGCCTTAATAGGAAGAAGATCGCCGCGATTAGGCCGACCAATTGGTTTCCGAACCCTAATTTGGAGATTCCAACTACCGATTTAACTCGAGACCGCCCGGTTATTGATGCGCTTAGTAGCGATGTTGCTGCCCCTCAAGTTTGA

mRNA sequence

ATGGAACCTGCAGCAAATCCTAAGAAACAATTATGCAAGTACTTAAAGCCCGGCGCGTTGGCGCAAATGCGAGACTCACGAATCAGAGCCAAAAGGAAAAGAGACAAATCGGTGAATCAAATATACCTCTGCCGTACTTCTGCTCTGGAATCGTCTCCGGTTTCCGGTACCGCCGCTCAATCGGAGATTAAGATCGTCGAGGATTTCAGTGTCGGTCCTCCGTTGTGCCTTAATAGGAAGAAGATCGCCGCGATTAGGCCGACCAATTGGTTTCCGAACCCTAATTTGGAGATTCCAACTACCGATTTAACTCGAGACCGCCCGGTTATTGATGCGCTTAGTAGCGATGTTGCTGCCCCTCAAGTTTGA

Coding sequence (CDS)

ATGGAACCTGCAGCAAATCCTAAGAAACAATTATGCAAGTACTTAAAGCCCGGCGCGTTGGCGCAAATGCGAGACTCACGAATCAGAGCCAAAAGGAAAAGAGACAAATCGGTGAATCAAATATACCTCTGCCGTACTTCTGCTCTGGAATCGTCTCCGGTTTCCGGTACCGCCGCTCAATCGGAGATTAAGATCGTCGAGGATTTCAGTGTCGGTCCTCCGTTGTGCCTTAATAGGAAGAAGATCGCCGCGATTAGGCCGACCAATTGGTTTCCGAACCCTAATTTGGAGATTCCAACTACCGATTTAACTCGAGACCGCCCGGTTATTGATGCGCTTAGTAGCGATGTTGCTGCCCCTCAAGTTTGA

Protein sequence

MEPAANPKKQLCKYLKPGALAQMRDSRIRAKRKRDKSVNQIYLCRTSALESSPVSGTAAQSEIKIVEDFSVGPPLCLNRKKIAAIRPTNWFPNPNLEIPTTDLTRDRPVIDALSSDVAAPQV
Homology
BLAST of CcUC03G055760 vs. NCBI nr
Match: XP_038902395.1 (uncharacterized protein LOC120089036 [Benincasa hispida])

HSP 1 Score: 123.2 bits (308), Expect = 1.5e-24
Identity = 73/123 (59.35%), Postives = 89/123 (72.36%), Query Frame = 0

Query: 2   EPAANPKKQLCKYLKPGALAQMRDSRIRAKRKRDKSVNQIYLCRTSALESSPVSGTAAQS 61
           +P A+  +Q  KYLKPGALAQMRDS+I AK  R  S++QIYL RTS L SSP+S T  QS
Sbjct: 10  KPYADRTEQFHKYLKPGALAQMRDSQISAKWYRFNSLSQIYLRRTSPLPSSPLS-TIGQS 69

Query: 62  EIKIVEDFSV-----GPPLCLNRKKIAAIRPTNWFPNPNLEIPTTDLTRDRPVIDALSSD 120
           EI +V+DF         P CL RKK+AAI+ T WFP+PNL+ PTTD+TRD PV+D  +SD
Sbjct: 70  EIDVVDDFPSLAGRGYGPFCLKRKKLAAIKAT-WFPSPNLQTPTTDITRD-PVVDVFNSD 129

BLAST of CcUC03G055760 vs. NCBI nr
Match: XP_023513131.1 (uncharacterized protein LOC111777660 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-22
Identity = 72/120 (60.00%), Postives = 87/120 (72.50%), Query Frame = 0

Query: 5   ANPKKQLCKYLKPGALAQMRDSRIRAKRKRDKSVNQIYLCRTSALESSPVSGTAAQSEIK 64
           AN  +Q  KYLKPGALA+MRDSRI A+  R  S++QIYL RT++LESSP+S    QSEI 
Sbjct: 13  ANRTEQFHKYLKPGALAKMRDSRISARSYRYNSLSQIYLRRTASLESSPLS-AIGQSEID 72

Query: 65  IVEDF-----SVGPPLCLNRKKIAAIRPTNWFPNPNLEIPTTDLTRDRPVIDALSSDVAA 120
            V+DF      V  PLCL RKK A I+ T WFP+PNL+ PTTDLT + P+IDA +SDVAA
Sbjct: 73  -VDDFPSLAGRVYGPLCLKRKKFAGIKST-WFPSPNLQTPTTDLTGE-PIIDAFNSDVAA 128

BLAST of CcUC03G055760 vs. NCBI nr
Match: XP_022986202.1 (uncharacterized protein LOC111484017 [Cucurbita maxima])

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-21
Identity = 69/120 (57.50%), Postives = 87/120 (72.50%), Query Frame = 0

Query: 5   ANPKKQLCKYLKPGALAQMRDSRIRAKRKRDKSVNQIYLCRTSALESSPVSGTAAQSEIK 64
           AN  +Q  K+LKPGALA+MRDSRI A+  R  S++QI+L RT++LESSP+S    QSEI 
Sbjct: 13  ANRTEQFHKFLKPGALAKMRDSRISARSYRYNSLSQIHLRRTASLESSPLS-AIGQSEID 72

Query: 65  IVEDF-----SVGPPLCLNRKKIAAIRPTNWFPNPNLEIPTTDLTRDRPVIDALSSDVAA 120
            V+DF      V  PLCL RKK+A I+ T WFP+PNL+ PTTDLT D  ++DA +SDVAA
Sbjct: 73  -VDDFPSLSGRVYGPLCLKRKKLAGIK-TTWFPSPNLQTPTTDLTGDH-IVDAFNSDVAA 128

BLAST of CcUC03G055760 vs. NCBI nr
Match: XP_022944248.1 (uncharacterized protein LOC111448755 [Cucurbita moschata] >KAG6570884.1 hypothetical protein SDJN03_29799, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010732.1 hypothetical protein SDJN02_27528, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-19
Identity = 67/120 (55.83%), Postives = 85/120 (70.83%), Query Frame = 0

Query: 5   ANPKKQLCKYLKPGALAQMRDSRIRAKRKRDKSVNQIYLCRTSALESSPVSGTAAQSEIK 64
           AN  +Q  KYLKPGALA++RDSRI A+  R  S++QIYL RT++ ESSP+S +  QSEI 
Sbjct: 13  ANRTEQFHKYLKPGALAKIRDSRISARLYRYNSLSQIYLRRTASPESSPLS-SIGQSEID 72

Query: 65  IVEDF-----SVGPPLCLNRKKIAAIRPTNWFPNPNLEIPTTDLTRDRPVIDALSSDVAA 120
            V+DF      V  PLCL RKK + I+ T WFP+PNL+ PT DL+ D  +IDA +SDVAA
Sbjct: 73  -VDDFPSLSGRVYGPLCLKRKKFSGIKST-WFPSPNLQTPTADLSGD-SIIDAFNSDVAA 128

BLAST of CcUC03G055760 vs. NCBI nr
Match: KAA0055730.1 (hypothetical protein E6C27_scaffold181G001140 [Cucumis melo var. makuwa])

HSP 1 Score: 94.0 bits (232), Expect = 9.7e-16
Identity = 53/100 (53.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query: 1   MEPAANPKKQLCKYLKPGALAQMRDSRIRAKRKRDKSVNQIYLCRTSALESSPVSGTAAQ 60
           M+ ++N +KQ  KY KPG LA+MRD +I +KR R KSV++IYL R  ALES P+     Q
Sbjct: 1   MKNSSNFEKQSRKYFKPGELARMRDLQIISKRNRVKSVSKIYLHR--ALESPPIFDIYNQ 60

Query: 61  SEIKIVEDFSVGPPLCLNRKKIAAIRPTNWFPNPNLEIPT 101
            E+++ ED   G P  L+RKKI  I+P N F NPNLEIPT
Sbjct: 61  LELRVTEDSRGGAPFFLDRKKITTIKPLNCFSNPNLEIPT 98

BLAST of CcUC03G055760 vs. ExPASy TrEMBL
Match: A0A6J1J6X7 (uncharacterized protein LOC111484017 OS=Cucurbita maxima OX=3661 GN=LOC111484017 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 5.8e-22
Identity = 69/120 (57.50%), Postives = 87/120 (72.50%), Query Frame = 0

Query: 5   ANPKKQLCKYLKPGALAQMRDSRIRAKRKRDKSVNQIYLCRTSALESSPVSGTAAQSEIK 64
           AN  +Q  K+LKPGALA+MRDSRI A+  R  S++QI+L RT++LESSP+S    QSEI 
Sbjct: 13  ANRTEQFHKFLKPGALAKMRDSRISARSYRYNSLSQIHLRRTASLESSPLS-AIGQSEID 72

Query: 65  IVEDF-----SVGPPLCLNRKKIAAIRPTNWFPNPNLEIPTTDLTRDRPVIDALSSDVAA 120
            V+DF      V  PLCL RKK+A I+ T WFP+PNL+ PTTDLT D  ++DA +SDVAA
Sbjct: 73  -VDDFPSLSGRVYGPLCLKRKKLAGIK-TTWFPSPNLQTPTTDLTGDH-IVDAFNSDVAA 128

BLAST of CcUC03G055760 vs. ExPASy TrEMBL
Match: A0A6J1FXV4 (uncharacterized protein LOC111448755 OS=Cucurbita moschata OX=3662 GN=LOC111448755 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 9.2e-20
Identity = 67/120 (55.83%), Postives = 85/120 (70.83%), Query Frame = 0

Query: 5   ANPKKQLCKYLKPGALAQMRDSRIRAKRKRDKSVNQIYLCRTSALESSPVSGTAAQSEIK 64
           AN  +Q  KYLKPGALA++RDSRI A+  R  S++QIYL RT++ ESSP+S +  QSEI 
Sbjct: 13  ANRTEQFHKYLKPGALAKIRDSRISARLYRYNSLSQIYLRRTASPESSPLS-SIGQSEID 72

Query: 65  IVEDF-----SVGPPLCLNRKKIAAIRPTNWFPNPNLEIPTTDLTRDRPVIDALSSDVAA 120
            V+DF      V  PLCL RKK + I+ T WFP+PNL+ PT DL+ D  +IDA +SDVAA
Sbjct: 73  -VDDFPSLSGRVYGPLCLKRKKFSGIKST-WFPSPNLQTPTADLSGD-SIIDAFNSDVAA 128

BLAST of CcUC03G055760 vs. ExPASy TrEMBL
Match: A0A5A7UKR6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001140 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 4.7e-16
Identity = 53/100 (53.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query: 1   MEPAANPKKQLCKYLKPGALAQMRDSRIRAKRKRDKSVNQIYLCRTSALESSPVSGTAAQ 60
           M+ ++N +KQ  KY KPG LA+MRD +I +KR R KSV++IYL R  ALES P+     Q
Sbjct: 1   MKNSSNFEKQSRKYFKPGELARMRDLQIISKRNRVKSVSKIYLHR--ALESPPIFDIYNQ 60

Query: 61  SEIKIVEDFSVGPPLCLNRKKIAAIRPTNWFPNPNLEIPT 101
            E+++ ED   G P  L+RKKI  I+P N F NPNLEIPT
Sbjct: 61  LELRVTEDSRGGAPFFLDRKKITTIKPLNCFSNPNLEIPT 98

BLAST of CcUC03G055760 vs. ExPASy TrEMBL
Match: A0A0A0LZ95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600090 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.2e-14
Identity = 52/115 (45.22%), Postives = 71/115 (61.74%), Query Frame = 0

Query: 1   MEPAANPKKQLCKYLKPGALAQMRDSRIRAKRKRDKSVNQIYLCRTSALESSPVSGTAAQ 60
           M+  +N KKQ  KY KPG LAQ+RDS+I AKR R KS+++I  C    +ES  +   + Q
Sbjct: 1   MKSESNDKKQSRKYFKPGELAQIRDSQINAKRNRVKSISKI--CLHPIVESPSIFDISNQ 60

Query: 61  SEIKIVEDFSVGPPLCLNRKKIAAIRPTNWFPNPNLEIPTTDLTRDRPVIDALSS 116
            E ++ +    G     NRKKIAAI+P N F NPNLE P  +LT D+ +I ++ S
Sbjct: 61  LEFRMAKVCPNGASFFPNRKKIAAIKPDNLFSNPNLESPIIELTSDQLIIGSVDS 113

BLAST of CcUC03G055760 vs. ExPASy TrEMBL
Match: A0A5D3CF62 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001100 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.0e-10
Identity = 43/78 (55.13%), Postives = 52/78 (66.67%), Query Frame = 0

Query: 23  MRDSRIRAKRKRDKSVNQIYLCRTSALESSPVSGTAAQSEIKIVEDFSVGPPLCLNRKKI 82
           MRD +I AKR R KSV++IYL R  ALES P+     Q E+++ ED   G P  L+RKKI
Sbjct: 1   MRDLQIIAKRNRVKSVSKIYLHR--ALESPPIFDIYNQLELRVTEDSRGGAPFFLDRKKI 60

Query: 83  AAIRPTNWFPNPNLEIPT 101
             I+P N F NPNLEIPT
Sbjct: 61  TTIKPLNCFSNPNLEIPT 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038902395.11.5e-2459.35uncharacterized protein LOC120089036 [Benincasa hispida][more]
XP_023513131.11.4e-2260.00uncharacterized protein LOC111777660 [Cucurbita pepo subsp. pepo][more]
XP_022986202.11.2e-2157.50uncharacterized protein LOC111484017 [Cucurbita maxima][more]
XP_022944248.11.9e-1955.83uncharacterized protein LOC111448755 [Cucurbita moschata] >KAG6570884.1 hypothet... [more]
KAA0055730.19.7e-1653.00hypothetical protein E6C27_scaffold181G001140 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1J6X75.8e-2257.50uncharacterized protein LOC111484017 OS=Cucurbita maxima OX=3661 GN=LOC111484017... [more]
A0A6J1FXV49.2e-2055.83uncharacterized protein LOC111448755 OS=Cucurbita moschata OX=3662 GN=LOC1114487... [more]
A0A5A7UKR64.7e-1653.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LZ951.2e-1445.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600090 PE=4 SV=1[more]
A0A5D3CF621.0e-1055.13Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35495:SF10SUBFAMILY NOT NAMEDcoord: 9..119
NoneNo IPR availablePANTHERPTHR35495OS06G0679600 PROTEINcoord: 9..119

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC03G055760.1CcUC03G055760.1mRNA