CcUC03G051500 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC03G051500
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionmediator of RNA polymerase II transcription subunit 1 isoform X1
LocationCicolChr03: 11948110 .. 11953917 (-)
RNA-Seq ExpressionCcUC03G051500
SyntenyCcUC03G051500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTCACATTTGTTCGCCGTCTCCCCTTCAAGACTTCTTCTATACGCTCGCTTCATCTTCTCTCTTTCTCTTTATCTCTCTATCTCTCTCTCCGCCCTTCCGTTTCTCTCTGCCGTTTTACGTTCTCTCCGCCACCGCACGGCGGCTGAAGCTGACAACCGAACCGAACAAACAGACAAAAACCCTATTCGCTATTCCGAACAACCCAAAGCCTCATTTTCTCTCATTCCCAATCCCTTTCCCTCTCTCTCCGCCGCCGCTTTCTTTCTTCACACTCTGAAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTATCTATCTATCTATATTGTTGTTGCCCTCTTCAGACGCATTTCTTTTTGTTTTGGGGATATACAGCAACCACTGGGGGGCAGTTTTTGAAACAGTTGCGCCTTCTGGGGTTCTTCAATCAGTCTTGAGGGTAGGGTTAGTTCTTCCTCTTCATCGGATATCTCACAGGTTATATTATCTATCTCTTGTGTATTTTCTTGCGGGTTTGGACCTCTGCGGAAGTTTTTTTTTTTCTGAGGGTGCATATTTGGTTTAGGGTTTCTGATATTTTTCTTTTGGGCACATTCAGTCGGAGTTGGGATTCTGGTTATTCCAATTTCTTATTTCGTTAGGGTTTCTTTTTATTCTCTGATCGAACTGTTTTGACGGGGACAATCTTCGGTTTTGGAATTGCTCCACCTCTTTATTCTTGAGGTATACCTTCTTATATTTCTGCATCTCAACCGATTCCCTCAAAGATGAGGGTTTTCCGAGCGTGTTTTGCTGACCGAATCTACACTTAATCGAACACGGAGGCTGGGAGAAGATAGTGTGAGGTCTTTCCTCTTTTATCATTCTTTTCAATTGAACCGCTTCATCTTATCCCCGCTATTTCCTCTGTTTTCGTCATCTGAAATCCCACTCCCGTATGAGAATTAGGTTATATTGATTTTGCACATAAGATAAGATAAATCCCGTTCAGAATGCGTTCAGCTTGTAGCCAAATTGGTAGCTACTTGCTTGAATACCGGCGGTCGTGAAGTAGGATAGTTGTTGAAGATAACTTCTTTAGTAGCATTTAGGACATAAATTTTGAGAACCATCCTCTGGGTTCACTACCGTGCGCGAGTTTGCAACGCTGAAGCAATTCACTGCGCATGTCTCTCTTTGCTGGAACCCTGGATATGCCATAAAGTTGATGACACATGGTTTGTTGCCGTGAATTGCATAGTCAGGGATGCTCGTGAAAGTTCATCCAGCTTAAAATAGAGGTTAGGCATTTGAAATAATAAAGTACAGGCTAGGGTTTTATAAATTCCTCTGCACAAGGAGTACGGTTTTTGGAAATTTGAGGCGGTAAAGAAGGCAAGAAGTGTTTTTTTCTTCTGATATTTTGATCATGTTCAGTATTCCTTATGGAAAGAAGTGAACCCACATTAGTTCCAGAATGGTTGAGAAGTACTGGAAGCGTTACTGGTGGCGGCAATTCAAACCACCATTTTCCGTCGTCTTCTTCCCACTCAGGTACTGCTTTTCTTTTTTTTTTTTTCATTGTTGCATGCTTCGAATAAAGATGACTTGCCTCTGTTTTGATATTGTGAACGCTGTTAATGTATATCCTGTGTTGTTGTGTAGATGTCCCCTCTCTATCTCAATTGAGAAATAGAACTTCCAAGACCGCCAGCGATTTTGACACCTCGCGTTCTGCTTTTCTGGATCGGACATCTTCATCAAATTCAAGGAGAAGTTCAAGTAATGGTTCTTCCAAACATGCATATAGTAGCTTTAACAGGGGTCATCGTGATAAGGATCGTGAGAAAGAAAAGGATAGGTTAAACTTTGGGGATAATTGGGACCGTGACTCTCATGACCCTCTTGGAAAGATTCTTTCCAACAGGATTGATAAGGATGCTTTGCGGCGGTCCCATTCAATGGTATCCAGGAAGCAAGGTGAGCGTGAGTTGTTTCATAGAAGAGTTGCAACAGAAATGAAAAGTCACAACAGCAATGGAATTCTTTCTGGAGCTAGTGTCGGTAGTAGCATTCAGAAAGCTGTATTTGAAAAGGATTTCCCATCTCTGGGATCTGAAGACAAGCAGGGAGCATCAGAAATTGGAAGAGTTTCATCTCCTGGTTTGAGCTCGCCAGTTCAAAGCTTGCCTATTGGCAATTCAGCCTTAATTGTTGGTGGAGAGGGATGGACATCTGCTCTTGCTGAGGTGCCCAGTATGATCGGAAGCACCACAGGGTCACCGTCATTTCAACAAATTGTTCCTGCTACATCAGGGGCAGGGCCTCTGAGTATTACAGCCGGACTTAATATGGCCGAAGCGTTGGTGCAGGTTCCATCTCGAGCTCGTGCTGCTCCCCAGGTATCTGAGGTACTATACTAACCTTCTTGTGCTGTACAGTATGTTCTCCTTTTGGTCTAACAGTCTCATCCTTTACCCCCACTTTGGTAGTTATCTGTCAAGACCCAGAGGCTTGAGGAATTGGCTATTAAACAGTCCAGGCAATTAATACCAGTGACGCCTTCTATGCCAAAAGCTATGGTAATTGGAGCTAATGCAATTGTTGAATCTTTGTTGTTAGACCTTTTCCTGCTTCTATATATTTTAATTATTTGGTGTTTGTTGGTTTGAAAATGTAAAGGTTTGTAATTAAAATATATAAGAGAACTGAGAACCATCTGAACCGAACCTAGACAACTTTTGCCAATATCTGATTTCAGCTGGGACTAATACTCTCTTCAAAGCTGCTTTTGTGTTGTAGTATTAGGCACTTAGCATGTATAAACTATGTGTATGTTTTGACATTTTTCTGCTACTACATTTTAGGCTGGTGACTGATGATTTAAATTTTTGGATTTAGCTTGTTAAATAAACTCTGCTACTAAATTTTAGGAACTGTATATTTTTGTGGAAGTTGGTTATTCAAGTGTTCTATCTCTTCAACTTACTCATTGACTAAAGAGCAGTGTTTATGCGTTAGATAGCGGAAGTTAAAACATTTGTTAGAAGTTTCAAAGTTATTTGCGATGTGGAAGATAGGCTAGATCACTTTTCCTCCTTCTATTTGATTAAGAACTCAATTTTTAGAACTCAAGGACACAGTTGTAGGAACAGATCCTATCCAAGTAAGGTTGTATGAGAAACTCAATTTAAGGACGGTTGGAAGAACAAAATGCAAGTGAGCCCCATAACGGCCGCCAGGGATTTAGGAATTGGTTATTTTAACTTCTTCGAAGCGTTTTGTCCTTGCTTTCTTGCCTCAACCCTTTTGGAAATTTGTAAGAACTAGACGATAGGGAGGAGATAACCAGATTTGATTTTGGACCCCATGTCATAGTGTTCATATATGTGCCTTGCTACTTTTGACACTTTGCGAACTGAATTATCTTTGGTTAACCACTTTTTATTCTCTCTCGAGGATGGAATAGGTCAGTGTTAGATTAAATATGCTTTAAAGGAAGTGTGAAGTTTCTATTATTAGCGTTGTTCATTTGAGATTGTTGTGCTGTAGCCAATATGTGACTGATGGCTAGTATCCTTTGTTTGTTAACGTGTTCTATTTGGTAGGCAAGTTTTCTGTTAACTGATTGCCAACCCCTCTTCAGTATTAATAGTTGTAACTTGACTGAGCATTCCTCTTCTGAAATATTCTCATTTGTCTTCTGTTTTGTTTTTTGAAGCTGATGTAAATAATTGTTGAGTTTCAGTATGGTGATGTAATAAACTTGCTTGGCAGTATAGTTCTTAAAATAGTTTTAGAACAAAAAAAATGCAAATATTTTGTTGTGTTTTATTTAATGATTCCAAAATTAATTCATATATTCTTATATATGTTTAAATTCAATAATCTAAGTTTAAATGGATTTAAATATGTATTCTTATATTTACATTCTGAAGAAATAAATGAGAATGGAAAATTATACCATATCTTTGCTAATAATCTTAAGTAGACTTGTCTGTAAAAAAAAATTTGATTAAATACATCCAGGATGTTCTCCACCCTCGTAATATGAATACAGTTAGTTTTTACGTTTTGAATAATCCCCTCTGTACCATGGTGTAAAGTTCTACAACGGAAATCTTCTGTTTGTATCTTCTGTTTATACCATCGTGACGTATCTCTCATTATTATATCTAACTGCAAATCTTCTGTTTCTCCCCTTAGATAATCATTAGCTTTTTTGTGTTTTTTGTTTGACAGGTGCTTAATTCTTCGGATAAATCAAAGCCCAAATTAGCATCAAGAACTGCAGAACTTAGTGTAACCATCAAGGGTGGACAGCCACAGCCGTTGTCAGTTCATGCCAACCAATCTCGTGGAGGACATGTCAAGTCCGATGCTCAAAAAAGTTCTCATGGGAAGTTTCTTGTTTTGAAACCTGTAAGAGAAAATGGTGTCTCCCTTACAGCAAAGGATGTCTCAAGTCCAACTAGTAATGCAAATAGCATGGCAGCAAACAGCCAGTTCGCTCTTGCACCTTCAGTTCCACATCCTCCTTTGAGAAGCCCAAATAATACAAATGTTTCTTCCGTAGAGCGCAAAATTGCTAGCTTAGATCTCAAATCCGGAACAACTTTAGAAAAAAGACCATCCTTATCTCAAGTCCAGAGCCGGAATGATTTCTTTAACCTCATTAAGAAGAAAACTTCAATGAGTTCTTCTGCCGTTCTCTCAGATTCATGCTCTTCTGTGAAATCTCCTTCAATTGGCCAATCTAATGAACTAACAAGGGAAGAAATTGACATTCCCGCAAGTCCTCGTATTATTGAAAATGGTTCTGTGGAGGATAGAAATGGAGATAGTTCTGAAGAGGTTCAAGCATCCTGTGATAGTGGTGAAAAAACTGAGAGCCACGTTGCTGCAGAATCTCTAGATGAAGAGGAGGCTGCCTTTCTTCGTTCTCTTGGCTGGGATGAAAACTGTGGTGAGGACGAAGGTCTTACTGAAGAAGAAATCAATTCTTTCTATCGGGAGGTAATAAATACTTCTATTGCTTTCACTGCAATGCTTTTCAAAATACTGTTGTTTTCTCTGTTATCTGATGAAGTTGTAAATTCAATTCTTAATTGCAGTACATGAACTTGAAGCCATCTCTAAAGATGGGTCGATGCATTCAGCCAAAGATATTTGTGCCATCTGAATCTCACGAGGACAGCAAGGATGGAGCCGGTTCTGAATTGAGCTCATCTGACTCGGAAGCCTGAATTACTTTTTTCTTTTTCACTCATGAGAAGTTGCTAGTTCACAATTTTTAATGGCAGTGGGGGTTAGTTTTTTTTTTTTGTCTTCTTTTTAAATTTTTTTTTTCTCTTTTTGTTTTCATGGTTTTAAAGAAATGCTGATGAGAGTTGGGTTGGAAGAAGAGGTGGATGTTAATTGAACACTGAACAGTGCAAATAGTGCAATAAGTTACAGTTGCCCCAAATCATCCTTGCTGCCTTAGCTTTACAGCGGGAGTTTTTGCGGTTTTTGAAAAGGGCAGTTGATGATGAGGTTTGGCGGGCCTGAAAGATGTATGCAAATTCCATCTTTTGGTTTATTTTGGTTTTTGATTCTTGAAGTTACTAGGAAAAAAGAAAAAAGAAAAAAAAGAAAAAAGAGTTACGCTTCTTCAAAGGAAATTGGGAAATTATGGAAAATGAAAAAAGGTTTCTATCTTCGTTCGGTATAATATTGATTTATTGTTTTGGGATGTTACCTTTCTAAGTTGGTAGTACTAGCCTTGTTTGACATTGAATTGCACTAATTACACATGAATAAGAGGATTAGATTTAGA

mRNA sequence

TTTTTCACATTTGTTCGCCGTCTCCCCTTCAAGACTTCTTCTATACGCTCGCTTCATCTTCTCTCTTTCTCTTTATCTCTCTATCTCTCTCTCCGCCCTTCCGTTTCTCTCTGCCGTTTTACGTTCTCTCCGCCACCGCACGGCGGCTGAAGCTGACAACCGAACCGAACAAACAGACAAAAACCCTATTCGCTATTCCGAACAACCCAAAGCCTCATTTTCTCTCATTCCCAATCCCTTTCCCTCTCTCTCCGCCGCCGCTTTCTTTCTTCACACTCTGAAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTATCTATCTATCTATATTGTTGTTGCCCTCTTCAGACGCATTTCTTTTTGTTTTGGGGATATACAGCAACCACTGGGGGGCAGTTTTTGAAACAGTTGCGCCTTCTGGGGTTCTTCAATCAGTCTTGAGGGTAGGGTTAGTTCTTCCTCTTCATCGGATATCTCACAGGTTATATTATCTATCTCTTGTGTATTTTCTTGCGGGTTTGGACCTCTGCGGAAGTTTTTTTTTTTCTGAGGGTGCATATTTGGTTTAGGGTTTCTGATATTTTTCTTTTGGGCACATTCAGTCGGAGTTGGGATTCTGGTTATTCCAATTTCTTATTTCGTTAGGGTTTCTTTTTATTCTCTGATCGAACTGTTTTGACGGGGACAATCTTCGGTTTTGGAATTGCTCCACCTCTTTATTCTTGAGGTATACCTTCTTATATTTCTGCATCTCAACCGATTCCCTCAAAGATGAGGGTTTTCCGAGCGTGTTTTGCTGACCGAATCTACACTTAATCGAACACGGAGGCTGGGAGAAGATAGTGTGAGGTCTTTCCTCTTTTATCATTCTTTTCAATTGAACCGCTTCATCTTATCCCCGCTATTTCCTCTGTTTTCGTCATCTGAAATCCCACTCCCGTATGAGAATTAGGTTATATTGATTTTGCACATAAGATAAGATAAATCCCGTTCAGAATGCGTTCAGCTTGTAGCCAAATTGGTAGCTACTTGCTTGAATACCGGCGGTCGTGAAGTAGGATAGTTGTTGAAGATAACTTCTTTAGTAGCATTTAGGACATAAATTTTGAGAACCATCCTCTGGGTTCACTACCGTGCGCGAGTTTGCAACGCTGAAGCAATTCACTGCGCATGTCTCTCTTTGCTGGAACCCTGGATATGCCATAAAGTTGATGACACATGGTTTGTTGCCGTGAATTGCATAGTCAGGGATGCTCGTGAAAGTTCATCCAGCTTAAAATAGAGGTTAGGCATTTGAAATAATAAAGTACAGGCTAGGGTTTTATAAATTCCTCTGCACAAGGAGTACGGTTTTTGGAAATTTGAGGCGGTAAAGAAGGCAAGAAGTGTTTTTTTCTTCTGATATTTTGATCATGTTCAGTATTCCTTATGGAAAGAAGTGAACCCACATTAGTTCCAGAATGGTTGAGAAGTACTGGAAGCGTTACTGGTGGCGGCAATTCAAACCACCATTTTCCGTCGTCTTCTTCCCACTCAGATGTCCCCTCTCTATCTCAATTGAGAAATAGAACTTCCAAGACCGCCAGCGATTTTGACACCTCGCGTTCTGCTTTTCTGGATCGGACATCTTCATCAAATTCAAGGAGAAGTTCAAGTAATGGTTCTTCCAAACATGCATATAGTAGCTTTAACAGGGGTCATCGTGATAAGGATCGTGAGAAAGAAAAGGATAGGTTAAACTTTGGGGATAATTGGGACCGTGACTCTCATGACCCTCTTGGAAAGATTCTTTCCAACAGGATTGATAAGGATGCTTTGCGGCGGTCCCATTCAATGGTATCCAGGAAGCAAGGTGAGCGTGAGTTGTTTCATAGAAGAGTTGCAACAGAAATGAAAAGTCACAACAGCAATGGAATTCTTTCTGGAGCTAGTGTCGGTAGTAGCATTCAGAAAGCTGTATTTGAAAAGGATTTCCCATCTCTGGGATCTGAAGACAAGCAGGGAGCATCAGAAATTGGAAGAGTTTCATCTCCTGGTTTGAGCTCGCCAGTTCAAAGCTTGCCTATTGGCAATTCAGCCTTAATTGTTGGTGGAGAGGGATGGACATCTGCTCTTGCTGAGGTGCCCAGTATGATCGGAAGCACCACAGGGTCACCGTCATTTCAACAAATTGTTCCTGCTACATCAGGGGCAGGGCCTCTGAGTATTACAGCCGGACTTAATATGGCCGAAGCGTTGGTGCAGGTTCCATCTCGAGCTCGTGCTGCTCCCCAGTTATCTGTCAAGACCCAGAGGCTTGAGGAATTGGCTATTAAACAGTCCAGGCAATTAATACCAGTGACGCCTTCTATGCCAAAAGCTATGGTAATTGGAGCTAATGCAATTGTGCTTAATTCTTCGGATAAATCAAAGCCCAAATTAGCATCAAGAACTGCAGAACTTAGTGTAACCATCAAGGGTGGACAGCCACAGCCGTTGTCAGTTCATGCCAACCAATCTCGTGGAGGACATGTCAAGTCCGATGCTCAAAAAAGTTCTCATGGGAAGTTTCTTGTTTTGAAACCTGTAAGAGAAAATGGTGTCTCCCTTACAGCAAAGGATGTCTCAAGTCCAACTAGTAATGCAAATAGCATGGCAGCAAACAGCCAGTTCGCTCTTGCACCTTCAGTTCCACATCCTCCTTTGAGAAGCCCAAATAATACAAATGTTTCTTCCGTAGAGCGCAAAATTGCTAGCTTAGATCTCAAATCCGGAACAACTTTAGAAAAAAGACCATCCTTATCTCAAGTCCAGAGCCGGAATGATTTCTTTAACCTCATTAAGAAGAAAACTTCAATGAGTTCTTCTGCCGTTCTCTCAGATTCATGCTCTTCTGTGAAATCTCCTTCAATTGGCCAATCTAATGAACTAACAAGGGAAGAAATTGACATTCCCGCAAGTCCTCGTATTATTGAAAATGGTTCTGTGGAGGATAGAAATGGAGATAGTTCTGAAGAGGTTCAAGCATCCTGTGATAGTGGTGAAAAAACTGAGAGCCACGTTGCTGCAGAATCTCTAGATGAAGAGGAGGCTGCCTTTCTTCGTTCTCTTGGCTGGGATGAAAACTGTGGTGAGGACGAAGGTCTTACTGAAGAAGAAATCAATTCTTTCTATCGGGAGTACATGAACTTGAAGCCATCTCTAAAGATGGGTCGATGCATTCAGCCAAAGATATTTGTGCCATCTGAATCTCACGAGGACAGCAAGGATGGAGCCGGTTCTGAATTGAGCTCATCTGACTCGGAAGCCTGAATTACTTTTTTCTTTTTCACTCATGAGAAGTTGCTAGTTCACAATTTTTAATGGCAGTGGGGGTTAGTTTTTTTTTTTTGTCTTCTTTTTAAATTTTTTTTTTCTCTTTTTGTTTTCATGGTTTTAAAGAAATGCTGATGAGAGTTGGGTTGGAAGAAGAGGTGGATGTTAATTGAACACTGAACAGTGCAAATAGTGCAATAAGTTACAGTTGCCCCAAATCATCCTTGCTGCCTTAGCTTTACAGCGGGAGTTTTTGCGGTTTTTGAAAAGGGCAGTTGATGATGAGGTTTGGCGGGCCTGAAAGATGTATGCAAATTCCATCTTTTGGTTTATTTTGGTTTTTGATTCTTGAAGTTACTAGGAAAAAAGAAAAAAGAAAAAAAAGAAAAAAGAGTTACGCTTCTTCAAAGGAAATTGGGAAATTATGGAAAATGAAAAAAGGTTTCTATCTTCGTTCGGTATAATATTGATTTATTGTTTTGGGATGTTACCTTTCTAAGTTGGTAGTACTAGCCTTGTTTGACATTGAATTGCACTAATTACACATGAATAAGAGGATTAGATTTAGA

Coding sequence (CDS)

ATGGAAAGAAGTGAACCCACATTAGTTCCAGAATGGTTGAGAAGTACTGGAAGCGTTACTGGTGGCGGCAATTCAAACCACCATTTTCCGTCGTCTTCTTCCCACTCAGATGTCCCCTCTCTATCTCAATTGAGAAATAGAACTTCCAAGACCGCCAGCGATTTTGACACCTCGCGTTCTGCTTTTCTGGATCGGACATCTTCATCAAATTCAAGGAGAAGTTCAAGTAATGGTTCTTCCAAACATGCATATAGTAGCTTTAACAGGGGTCATCGTGATAAGGATCGTGAGAAAGAAAAGGATAGGTTAAACTTTGGGGATAATTGGGACCGTGACTCTCATGACCCTCTTGGAAAGATTCTTTCCAACAGGATTGATAAGGATGCTTTGCGGCGGTCCCATTCAATGGTATCCAGGAAGCAAGGTGAGCGTGAGTTGTTTCATAGAAGAGTTGCAACAGAAATGAAAAGTCACAACAGCAATGGAATTCTTTCTGGAGCTAGTGTCGGTAGTAGCATTCAGAAAGCTGTATTTGAAAAGGATTTCCCATCTCTGGGATCTGAAGACAAGCAGGGAGCATCAGAAATTGGAAGAGTTTCATCTCCTGGTTTGAGCTCGCCAGTTCAAAGCTTGCCTATTGGCAATTCAGCCTTAATTGTTGGTGGAGAGGGATGGACATCTGCTCTTGCTGAGGTGCCCAGTATGATCGGAAGCACCACAGGGTCACCGTCATTTCAACAAATTGTTCCTGCTACATCAGGGGCAGGGCCTCTGAGTATTACAGCCGGACTTAATATGGCCGAAGCGTTGGTGCAGGTTCCATCTCGAGCTCGTGCTGCTCCCCAGTTATCTGTCAAGACCCAGAGGCTTGAGGAATTGGCTATTAAACAGTCCAGGCAATTAATACCAGTGACGCCTTCTATGCCAAAAGCTATGGTAATTGGAGCTAATGCAATTGTGCTTAATTCTTCGGATAAATCAAAGCCCAAATTAGCATCAAGAACTGCAGAACTTAGTGTAACCATCAAGGGTGGACAGCCACAGCCGTTGTCAGTTCATGCCAACCAATCTCGTGGAGGACATGTCAAGTCCGATGCTCAAAAAAGTTCTCATGGGAAGTTTCTTGTTTTGAAACCTGTAAGAGAAAATGGTGTCTCCCTTACAGCAAAGGATGTCTCAAGTCCAACTAGTAATGCAAATAGCATGGCAGCAAACAGCCAGTTCGCTCTTGCACCTTCAGTTCCACATCCTCCTTTGAGAAGCCCAAATAATACAAATGTTTCTTCCGTAGAGCGCAAAATTGCTAGCTTAGATCTCAAATCCGGAACAACTTTAGAAAAAAGACCATCCTTATCTCAAGTCCAGAGCCGGAATGATTTCTTTAACCTCATTAAGAAGAAAACTTCAATGAGTTCTTCTGCCGTTCTCTCAGATTCATGCTCTTCTGTGAAATCTCCTTCAATTGGCCAATCTAATGAACTAACAAGGGAAGAAATTGACATTCCCGCAAGTCCTCGTATTATTGAAAATGGTTCTGTGGAGGATAGAAATGGAGATAGTTCTGAAGAGGTTCAAGCATCCTGTGATAGTGGTGAAAAAACTGAGAGCCACGTTGCTGCAGAATCTCTAGATGAAGAGGAGGCTGCCTTTCTTCGTTCTCTTGGCTGGGATGAAAACTGTGGTGAGGACGAAGGTCTTACTGAAGAAGAAATCAATTCTTTCTATCGGGAGTACATGAACTTGAAGCCATCTCTAAAGATGGGTCGATGCATTCAGCCAAAGATATTTGTGCCATCTGAATCTCACGAGGACAGCAAGGATGGAGCCGGTTCTGAATTGAGCTCATCTGACTCGGAAGCCTGA

Protein sequence

MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQLRNRTSKTASDFDTSRSAFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDSHDPLGKILSNRIDKDALRRSHSMVSRKQGERELFHRRVATEMKSHNSNGILSGASVGSSIQKAVFEKDFPSLGSEDKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTGSPSFQQIVPATSGAGPLSITAGLNMAEALVQVPSRARAAPQLSVKTQRLEELAIKQSRQLIPVTPSMPKAMVIGANAIVLNSSDKSKPKLASRTAELSVTIKGGQPQPLSVHANQSRGGHVKSDAQKSSHGKFLVLKPVRENGVSLTAKDVSSPTSNANSMAANSQFALAPSVPHPPLRSPNNTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIGQSNELTREEIDIPASPRIIENGSVEDRNGDSSEEVQASCDSGEKTESHVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCIQPKIFVPSESHEDSKDGAGSELSSSDSEA
Homology
BLAST of CcUC03G051500 vs. NCBI nr
Match: XP_008460470.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X2 [Cucumis melo])

HSP 1 Score: 1039.3 bits (2686), Expect = 1.4e-299
Identity = 572/622 (91.96%), Postives = 587/622 (94.37%), Query Frame = 0

Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQLRNRTSKTASDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQ RNR SKT  DFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDSHDPLGKI 120
           +FLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRD+HDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGERELFHRRVATEMKSHN-SNGILSGASVGSSIQKAVFE 180
           LSNRIDKDALRRSHSMVSRKQG  ELFHRRV TE+KSHN SNGILSG SVGSSIQKAVFE
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQG--ELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFE 180

Query: 181 KDFPSLGSEDKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240
           KDFPSLGSE+KQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST
Sbjct: 181 KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240

Query: 241 TGSPSFQQIVPATSGAGPLSITAGLNMAEALVQVPSRARAAPQLSVKTQRLEELAIKQSR 300
            GS SFQQ VPATSGAGPLS+TAGLNMAEALVQ PSR R APQLSVKTQRLEELAIKQSR
Sbjct: 241 PGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQLSVKTQRLEELAIKQSR 300

Query: 301 QLIPVTPSMPKAMVIGANAIVLNSSDKSKPKLASRTAELSVTIKGGQPQPLSVHANQSRG 360
           QLIPVTPSMPKAM       VL+SSDKSKPKLASRT EL+ TIKGGQPQP SVHANQSR 
Sbjct: 301 QLIPVTPSMPKAM-------VLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRV 360

Query: 361 GHVKSDAQKSSHGKFLVLKPVRENGVSLTAKDVSSPTSNANSMAANSQFALAPSVPHPPL 420
           GHVK DAQKSSHGKFLVLKPVRENGVSL AKDVSSPTSNANSMAANSQFALAPSVPH PL
Sbjct: 361 GHVKPDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPL 420

Query: 421 RSPNNTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDS 480
           RSPNNTNVSSVERKIASLDLK+GTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDS
Sbjct: 421 RSPNNTNVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDS 480

Query: 481 CSSVKSPSIGQSNELTREEIDIPASPRIIENGSVEDRNGDSSEEVQASCDSGEKTESHVA 540
           CSSVKSPSIGQSNELT EE+ IPASPR+IENG+VE+RNG+SSEEVQ S DSGEKTESHVA
Sbjct: 481 CSSVKSPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVA 540

Query: 541 AESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCIQPKIFVPS 600
           AESLDEEEAAFLRSLGWDE+CGEDEGLTEEEINSFYREYMNLKPSLK+GRCIQPKIFVPS
Sbjct: 541 AESLDEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPS 600

Query: 601 ESHEDSK-DGAGSELSSSDSEA 621
           ES EDSK DGAGSELSSSDSEA
Sbjct: 601 ESREDSKDDGAGSELSSSDSEA 613

BLAST of CcUC03G051500 vs. NCBI nr
Match: XP_038907228.1 (mediator of RNA polymerase II transcription subunit 1 isoform X2 [Benincasa hispida])

HSP 1 Score: 1035.4 bits (2676), Expect = 2.0e-298
Identity = 567/621 (91.30%), Postives = 584/621 (94.04%), Query Frame = 0

Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQLRNRTSKTASDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGG NSNHHFPSSSSHSDVPSLSQ RNR SKT  DFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGSNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDSHDPLGKI 120
           AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGD+WDRDS DPLGKI
Sbjct: 61  AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDSWDRDSPDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGERELFHRRVATEMKSH-NSNGILSGASVGSSIQKAVFE 180
           LSN+IDKDALRRSHSMVSRK GERELFHRR ATE+K+H NSNGILSG SV SSIQKAVFE
Sbjct: 121 LSNKIDKDALRRSHSMVSRKLGERELFHRRAATELKNHNNSNGILSGTSVSSSIQKAVFE 180

Query: 181 KDFPSLGSEDKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240
           KDFPSLGSE+KQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST
Sbjct: 181 KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240

Query: 241 TGSPSFQQIVPATSGAGPLSITAGLNMAEALVQVPSRARAAPQLSVKTQRLEELAIKQSR 300
           TGS SFQQ VPATSGAGPLS+TAGLNMAEALVQ PSRARA PQLSVKTQRLEELAIKQSR
Sbjct: 241 TGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARATPQLSVKTQRLEELAIKQSR 300

Query: 301 QLIPVTPSMPKAMVIGANAIVLNSSDKSKPKLASRTAELSVTIKGGQPQPLSVHANQSRG 360
           QLIPVTPSM KAM       VLN SDKSKPKLASRT EL+VTIKGGQ QPLSVHANQSRG
Sbjct: 301 QLIPVTPSMTKAM-------VLNPSDKSKPKLASRTGELNVTIKGGQQQPLSVHANQSRG 360

Query: 361 GHVKSDAQKSSHGKFLVLKPVRENGVSLTAKDVSSPTSNANSMAANSQFALAPSVPHPPL 420
           G VKSDAQKS+HGKFLVLKPVRENG+SL AKDVSSPTSNANSMA NSQFALA +V H PL
Sbjct: 361 GLVKSDAQKSAHGKFLVLKPVRENGISLAAKDVSSPTSNANSMAVNSQFALASAVAHAPL 420

Query: 421 RSPNNTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDS 480
           RSPNNTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSM SSAVLSDS
Sbjct: 421 RSPNNTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSM-SSAVLSDS 480

Query: 481 CSSVKSPSIGQSNELTREEIDIPASPRIIENGSVEDRNGDSSEEVQASCDSGEKTESHVA 540
           CSSVKSPSI  SNELTREE D+PASPR+IENG+VE+RNGD SEEV+ASCD+GEKTESHVA
Sbjct: 481 CSSVKSPSISHSNELTREETDMPASPRVIENGAVENRNGDGSEEVRASCDTGEKTESHVA 540

Query: 541 AESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCIQPKIFVPS 600
           AESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCI+PKIFVPS
Sbjct: 541 AESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCIKPKIFVPS 600

Query: 601 ESHEDSKDGAGSELSSSDSEA 621
           ESHEDSKDGAGSELSSSDSEA
Sbjct: 601 ESHEDSKDGAGSELSSSDSEA 613

BLAST of CcUC03G051500 vs. NCBI nr
Match: XP_008460469.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis melo] >KAA0067384.1 mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis melo var. makuwa] >TYK26525.1 mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1033.9 bits (2672), Expect = 5.8e-298
Identity = 572/625 (91.52%), Postives = 587/625 (93.92%), Query Frame = 0

Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQLRNRTSKTASDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQ RNR SKT  DFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDSHDPLGKI 120
           +FLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRD+HDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGERELFHRRVATEMKSHN-SNGILSGASVGSSIQKAVFE 180
           LSNRIDKDALRRSHSMVSRKQG  ELFHRRV TE+KSHN SNGILSG SVGSSIQKAVFE
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQG--ELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFE 180

Query: 181 KDFPSLGSEDKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240
           KDFPSLGSE+KQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST
Sbjct: 181 KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240

Query: 241 TGSPSFQQIVPATSGAGPLSITAGLNMAEALVQVPSRARAAPQ---LSVKTQRLEELAIK 300
            GS SFQQ VPATSGAGPLS+TAGLNMAEALVQ PSR R APQ   LSVKTQRLEELAIK
Sbjct: 241 PGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIK 300

Query: 301 QSRQLIPVTPSMPKAMVIGANAIVLNSSDKSKPKLASRTAELSVTIKGGQPQPLSVHANQ 360
           QSRQLIPVTPSMPKAM       VL+SSDKSKPKLASRT EL+ TIKGGQPQP SVHANQ
Sbjct: 301 QSRQLIPVTPSMPKAM-------VLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQ 360

Query: 361 SRGGHVKSDAQKSSHGKFLVLKPVRENGVSLTAKDVSSPTSNANSMAANSQFALAPSVPH 420
           SR GHVK DAQKSSHGKFLVLKPVRENGVSL AKDVSSPTSNANSMAANSQFALAPSVPH
Sbjct: 361 SRVGHVKPDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPH 420

Query: 421 PPLRSPNNTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVL 480
            PLRSPNNTNVSSVERKIASLDLK+GTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVL
Sbjct: 421 APLRSPNNTNVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVL 480

Query: 481 SDSCSSVKSPSIGQSNELTREEIDIPASPRIIENGSVEDRNGDSSEEVQASCDSGEKTES 540
           SDSCSSVKSPSIGQSNELT EE+ IPASPR+IENG+VE+RNG+SSEEVQ S DSGEKTES
Sbjct: 481 SDSCSSVKSPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTES 540

Query: 541 HVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCIQPKIF 600
           HVAAESLDEEEAAFLRSLGWDE+CGEDEGLTEEEINSFYREYMNLKPSLK+GRCIQPKIF
Sbjct: 541 HVAAESLDEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIF 600

Query: 601 VPSESHEDSK-DGAGSELSSSDSEA 621
           VPSES EDSK DGAGSELSSSDSEA
Sbjct: 601 VPSESREDSKDDGAGSELSSSDSEA 616

BLAST of CcUC03G051500 vs. NCBI nr
Match: XP_038907227.1 (mediator of RNA polymerase II transcription subunit 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 1030.0 bits (2662), Expect = 8.3e-297
Identity = 567/624 (90.87%), Postives = 584/624 (93.59%), Query Frame = 0

Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQLRNRTSKTASDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGG NSNHHFPSSSSHSDVPSLSQ RNR SKT  DFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGSNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDSHDPLGKI 120
           AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGD+WDRDS DPLGKI
Sbjct: 61  AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDSWDRDSPDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGERELFHRRVATEMKSH-NSNGILSGASVGSSIQKAVFE 180
           LSN+IDKDALRRSHSMVSRK GERELFHRR ATE+K+H NSNGILSG SV SSIQKAVFE
Sbjct: 121 LSNKIDKDALRRSHSMVSRKLGERELFHRRAATELKNHNNSNGILSGTSVSSSIQKAVFE 180

Query: 181 KDFPSLGSEDKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240
           KDFPSLGSE+KQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST
Sbjct: 181 KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240

Query: 241 TGSPSFQQIVPATSGAGPLSITAGLNMAEALVQVPSRARAAPQ---LSVKTQRLEELAIK 300
           TGS SFQQ VPATSGAGPLS+TAGLNMAEALVQ PSRARA PQ   LSVKTQRLEELAIK
Sbjct: 241 TGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARATPQVSELSVKTQRLEELAIK 300

Query: 301 QSRQLIPVTPSMPKAMVIGANAIVLNSSDKSKPKLASRTAELSVTIKGGQPQPLSVHANQ 360
           QSRQLIPVTPSM KAM       VLN SDKSKPKLASRT EL+VTIKGGQ QPLSVHANQ
Sbjct: 301 QSRQLIPVTPSMTKAM-------VLNPSDKSKPKLASRTGELNVTIKGGQQQPLSVHANQ 360

Query: 361 SRGGHVKSDAQKSSHGKFLVLKPVRENGVSLTAKDVSSPTSNANSMAANSQFALAPSVPH 420
           SRGG VKSDAQKS+HGKFLVLKPVRENG+SL AKDVSSPTSNANSMA NSQFALA +V H
Sbjct: 361 SRGGLVKSDAQKSAHGKFLVLKPVRENGISLAAKDVSSPTSNANSMAVNSQFALASAVAH 420

Query: 421 PPLRSPNNTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVL 480
            PLRSPNNTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSM SSAVL
Sbjct: 421 APLRSPNNTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSM-SSAVL 480

Query: 481 SDSCSSVKSPSIGQSNELTREEIDIPASPRIIENGSVEDRNGDSSEEVQASCDSGEKTES 540
           SDSCSSVKSPSI  SNELTREE D+PASPR+IENG+VE+RNGD SEEV+ASCD+GEKTES
Sbjct: 481 SDSCSSVKSPSISHSNELTREETDMPASPRVIENGAVENRNGDGSEEVRASCDTGEKTES 540

Query: 541 HVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCIQPKIF 600
           HVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCI+PKIF
Sbjct: 541 HVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCIKPKIF 600

Query: 601 VPSESHEDSKDGAGSELSSSDSEA 621
           VPSESHEDSKDGAGSELSSSDSEA
Sbjct: 601 VPSESHEDSKDGAGSELSSSDSEA 616

BLAST of CcUC03G051500 vs. NCBI nr
Match: XP_011655200.1 (mediator of RNA polymerase II transcription subunit 1 isoform X2 [Cucumis sativus] >KGN51281.2 hypothetical protein Csa_009411 [Cucumis sativus])

HSP 1 Score: 1019.6 bits (2635), Expect = 1.1e-293
Identity = 564/622 (90.68%), Postives = 583/622 (93.73%), Query Frame = 0

Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQLRNRTSKTASDFDTSRS 60
           MERSEPTLVPEWLRSTGSV GGGN NHHFPSSSSHSDVPSLSQ RNR SKT  DFD+SRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVAGGGNPNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDSSRS 60

Query: 61  AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDSHDPLGKI 120
           +FLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRD+HDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGERELFHRRVATEMKSHN-SNGILSGASVGSSIQKAVFE 180
           LSNRIDKDALRRSHSMVSRKQG  ELFHRRV TE+KSHN SNGILSG SVGSSIQKAVFE
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQG--ELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFE 180

Query: 181 KDFPSLGSEDKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240
           KDFPSLGSE+KQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST
Sbjct: 181 KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240

Query: 241 TGSPSFQQIVPATSGAGPLSITAGLNMAEALVQVPSRARAAPQLSVKTQRLEELAIKQSR 300
           TGS SFQQ VPATSGAGPLS+TAGLNMAEALVQ PSRARAAPQLSVKTQRLEELAIKQSR
Sbjct: 241 TGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQLSVKTQRLEELAIKQSR 300

Query: 301 QLIPVTPSMPKAMVIGANAIVLNSSDKSKPKLASRTAELSVTIKGGQPQPLSVHANQSRG 360
           QLIPVTPSMPKAM       VL+SSDKSKPKLASRT EL+ TIKGGQPQPL VHANQSR 
Sbjct: 301 QLIPVTPSMPKAM-------VLSSSDKSKPKLASRTGELNATIKGGQPQPLLVHANQSRV 360

Query: 361 GHVKSDAQKSSHGKFLVLKPVRENGVSLTAKDVSSPTSNANSMAANSQFALAPSVPHPPL 420
           GHVK DAQKSSHGKFLVLKPVRENGVSL AKDVSSPTSNANSMAANSQFALAPSVPH PL
Sbjct: 361 GHVKPDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPL 420

Query: 421 RSPNNTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDS 480
           RSPNN NVSS+ERKIASLDLK+GTTLEKRPSLSQVQSRNDFF LIKKKTSM+SSAVLSDS
Sbjct: 421 RSPNNINVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMNSSAVLSDS 480

Query: 481 CSSVKSPSIGQSNELTREEIDIPASPRIIENGSVEDRNGDSSEEVQASCDSGEKTESHVA 540
           CSSVKSPSIGQSNELT EE+   ASPR+IENG+VE+RNG+SSEEVQ S DSGEKTESHVA
Sbjct: 481 CSSVKSPSIGQSNELTSEEMG-TASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVA 540

Query: 541 AESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCIQPKIFVPS 600
           AESLDEEEAAFLRSLGWDE+CGEDEGLTEEEINSFYREY+NLKPSLK+GRCIQPKIFVPS
Sbjct: 541 AESLDEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYVNLKPSLKIGRCIQPKIFVPS 600

Query: 601 ESHEDSK-DGAGSELSSSDSEA 621
           ES  DSK DGAGSELSSSDSEA
Sbjct: 601 ESRVDSKDDGAGSELSSSDSEA 612

BLAST of CcUC03G051500 vs. ExPASy TrEMBL
Match: A0A1S3CC42 (mediator of RNA polymerase II transcription subunit 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499274 PE=4 SV=1)

HSP 1 Score: 1039.3 bits (2686), Expect = 6.6e-300
Identity = 572/622 (91.96%), Postives = 587/622 (94.37%), Query Frame = 0

Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQLRNRTSKTASDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQ RNR SKT  DFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDSHDPLGKI 120
           +FLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRD+HDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGERELFHRRVATEMKSHN-SNGILSGASVGSSIQKAVFE 180
           LSNRIDKDALRRSHSMVSRKQG  ELFHRRV TE+KSHN SNGILSG SVGSSIQKAVFE
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQG--ELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFE 180

Query: 181 KDFPSLGSEDKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240
           KDFPSLGSE+KQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST
Sbjct: 181 KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240

Query: 241 TGSPSFQQIVPATSGAGPLSITAGLNMAEALVQVPSRARAAPQLSVKTQRLEELAIKQSR 300
            GS SFQQ VPATSGAGPLS+TAGLNMAEALVQ PSR R APQLSVKTQRLEELAIKQSR
Sbjct: 241 PGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQLSVKTQRLEELAIKQSR 300

Query: 301 QLIPVTPSMPKAMVIGANAIVLNSSDKSKPKLASRTAELSVTIKGGQPQPLSVHANQSRG 360
           QLIPVTPSMPKAM       VL+SSDKSKPKLASRT EL+ TIKGGQPQP SVHANQSR 
Sbjct: 301 QLIPVTPSMPKAM-------VLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRV 360

Query: 361 GHVKSDAQKSSHGKFLVLKPVRENGVSLTAKDVSSPTSNANSMAANSQFALAPSVPHPPL 420
           GHVK DAQKSSHGKFLVLKPVRENGVSL AKDVSSPTSNANSMAANSQFALAPSVPH PL
Sbjct: 361 GHVKPDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPL 420

Query: 421 RSPNNTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDS 480
           RSPNNTNVSSVERKIASLDLK+GTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDS
Sbjct: 421 RSPNNTNVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDS 480

Query: 481 CSSVKSPSIGQSNELTREEIDIPASPRIIENGSVEDRNGDSSEEVQASCDSGEKTESHVA 540
           CSSVKSPSIGQSNELT EE+ IPASPR+IENG+VE+RNG+SSEEVQ S DSGEKTESHVA
Sbjct: 481 CSSVKSPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVA 540

Query: 541 AESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCIQPKIFVPS 600
           AESLDEEEAAFLRSLGWDE+CGEDEGLTEEEINSFYREYMNLKPSLK+GRCIQPKIFVPS
Sbjct: 541 AESLDEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPS 600

Query: 601 ESHEDSK-DGAGSELSSSDSEA 621
           ES EDSK DGAGSELSSSDSEA
Sbjct: 601 ESREDSKDDGAGSELSSSDSEA 613

BLAST of CcUC03G051500 vs. ExPASy TrEMBL
Match: A0A5D3DT29 (Mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001070 PE=4 SV=1)

HSP 1 Score: 1033.9 bits (2672), Expect = 2.8e-298
Identity = 572/625 (91.52%), Postives = 587/625 (93.92%), Query Frame = 0

Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQLRNRTSKTASDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQ RNR SKT  DFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDSHDPLGKI 120
           +FLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRD+HDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGERELFHRRVATEMKSHN-SNGILSGASVGSSIQKAVFE 180
           LSNRIDKDALRRSHSMVSRKQG  ELFHRRV TE+KSHN SNGILSG SVGSSIQKAVFE
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQG--ELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFE 180

Query: 181 KDFPSLGSEDKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240
           KDFPSLGSE+KQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST
Sbjct: 181 KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240

Query: 241 TGSPSFQQIVPATSGAGPLSITAGLNMAEALVQVPSRARAAPQ---LSVKTQRLEELAIK 300
            GS SFQQ VPATSGAGPLS+TAGLNMAEALVQ PSR R APQ   LSVKTQRLEELAIK
Sbjct: 241 PGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIK 300

Query: 301 QSRQLIPVTPSMPKAMVIGANAIVLNSSDKSKPKLASRTAELSVTIKGGQPQPLSVHANQ 360
           QSRQLIPVTPSMPKAM       VL+SSDKSKPKLASRT EL+ TIKGGQPQP SVHANQ
Sbjct: 301 QSRQLIPVTPSMPKAM-------VLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQ 360

Query: 361 SRGGHVKSDAQKSSHGKFLVLKPVRENGVSLTAKDVSSPTSNANSMAANSQFALAPSVPH 420
           SR GHVK DAQKSSHGKFLVLKPVRENGVSL AKDVSSPTSNANSMAANSQFALAPSVPH
Sbjct: 361 SRVGHVKPDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPH 420

Query: 421 PPLRSPNNTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVL 480
            PLRSPNNTNVSSVERKIASLDLK+GTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVL
Sbjct: 421 APLRSPNNTNVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVL 480

Query: 481 SDSCSSVKSPSIGQSNELTREEIDIPASPRIIENGSVEDRNGDSSEEVQASCDSGEKTES 540
           SDSCSSVKSPSIGQSNELT EE+ IPASPR+IENG+VE+RNG+SSEEVQ S DSGEKTES
Sbjct: 481 SDSCSSVKSPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTES 540

Query: 541 HVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCIQPKIF 600
           HVAAESLDEEEAAFLRSLGWDE+CGEDEGLTEEEINSFYREYMNLKPSLK+GRCIQPKIF
Sbjct: 541 HVAAESLDEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIF 600

Query: 601 VPSESHEDSK-DGAGSELSSSDSEA 621
           VPSES EDSK DGAGSELSSSDSEA
Sbjct: 601 VPSESREDSKDDGAGSELSSSDSEA 616

BLAST of CcUC03G051500 vs. ExPASy TrEMBL
Match: A0A1S3CDT9 (mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499274 PE=4 SV=1)

HSP 1 Score: 1033.9 bits (2672), Expect = 2.8e-298
Identity = 572/625 (91.52%), Postives = 587/625 (93.92%), Query Frame = 0

Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQLRNRTSKTASDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQ RNR SKT  DFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDSHDPLGKI 120
           +FLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRD+HDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGERELFHRRVATEMKSHN-SNGILSGASVGSSIQKAVFE 180
           LSNRIDKDALRRSHSMVSRKQG  ELFHRRV TE+KSHN SNGILSG SVGSSIQKAVFE
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQG--ELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFE 180

Query: 181 KDFPSLGSEDKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240
           KDFPSLGSE+KQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST
Sbjct: 181 KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240

Query: 241 TGSPSFQQIVPATSGAGPLSITAGLNMAEALVQVPSRARAAPQ---LSVKTQRLEELAIK 300
            GS SFQQ VPATSGAGPLS+TAGLNMAEALVQ PSR R APQ   LSVKTQRLEELAIK
Sbjct: 241 PGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIK 300

Query: 301 QSRQLIPVTPSMPKAMVIGANAIVLNSSDKSKPKLASRTAELSVTIKGGQPQPLSVHANQ 360
           QSRQLIPVTPSMPKAM       VL+SSDKSKPKLASRT EL+ TIKGGQPQP SVHANQ
Sbjct: 301 QSRQLIPVTPSMPKAM-------VLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQ 360

Query: 361 SRGGHVKSDAQKSSHGKFLVLKPVRENGVSLTAKDVSSPTSNANSMAANSQFALAPSVPH 420
           SR GHVK DAQKSSHGKFLVLKPVRENGVSL AKDVSSPTSNANSMAANSQFALAPSVPH
Sbjct: 361 SRVGHVKPDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPH 420

Query: 421 PPLRSPNNTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVL 480
            PLRSPNNTNVSSVERKIASLDLK+GTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVL
Sbjct: 421 APLRSPNNTNVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVL 480

Query: 481 SDSCSSVKSPSIGQSNELTREEIDIPASPRIIENGSVEDRNGDSSEEVQASCDSGEKTES 540
           SDSCSSVKSPSIGQSNELT EE+ IPASPR+IENG+VE+RNG+SSEEVQ S DSGEKTES
Sbjct: 481 SDSCSSVKSPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTES 540

Query: 541 HVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCIQPKIF 600
           HVAAESLDEEEAAFLRSLGWDE+CGEDEGLTEEEINSFYREYMNLKPSLK+GRCIQPKIF
Sbjct: 541 HVAAESLDEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIF 600

Query: 601 VPSESHEDSK-DGAGSELSSSDSEA 621
           VPSES EDSK DGAGSELSSSDSEA
Sbjct: 601 VPSESREDSKDDGAGSELSSSDSEA 616

BLAST of CcUC03G051500 vs. ExPASy TrEMBL
Match: A0A0A0KN63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G387430 PE=4 SV=1)

HSP 1 Score: 1014.2 bits (2621), Expect = 2.3e-292
Identity = 564/625 (90.24%), Postives = 583/625 (93.28%), Query Frame = 0

Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQLRNRTSKTASDFDTSRS 60
           MERSEPTLVPEWLRSTGSV GGGN NHHFPSSSSHSDVPSLSQ RNR SKT  DFD+SRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVAGGGNPNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDSSRS 60

Query: 61  AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDSHDPLGKI 120
           +FLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRD+HDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGERELFHRRVATEMKSHN-SNGILSGASVGSSIQKAVFE 180
           LSNRIDKDALRRSHSMVSRKQG  ELFHRRV TE+KSHN SNGILSG SVGSSIQKAVFE
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQG--ELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFE 180

Query: 181 KDFPSLGSEDKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240
           KDFPSLGSE+KQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST
Sbjct: 181 KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240

Query: 241 TGSPSFQQIVPATSGAGPLSITAGLNMAEALVQVPSRARAAPQ---LSVKTQRLEELAIK 300
           TGS SFQQ VPATSGAGPLS+TAGLNMAEALVQ PSRARAAPQ   LSVKTQRLEELAIK
Sbjct: 241 TGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIK 300

Query: 301 QSRQLIPVTPSMPKAMVIGANAIVLNSSDKSKPKLASRTAELSVTIKGGQPQPLSVHANQ 360
           QSRQLIPVTPSMPKAM       VL+SSDKSKPKLASRT EL+ TIKGGQPQPL VHANQ
Sbjct: 301 QSRQLIPVTPSMPKAM-------VLSSSDKSKPKLASRTGELNATIKGGQPQPLLVHANQ 360

Query: 361 SRGGHVKSDAQKSSHGKFLVLKPVRENGVSLTAKDVSSPTSNANSMAANSQFALAPSVPH 420
           SR GHVK DAQKSSHGKFLVLKPVRENGVSL AKDVSSPTSNANSMAANSQFALAPSVPH
Sbjct: 361 SRVGHVKPDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPH 420

Query: 421 PPLRSPNNTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVL 480
            PLRSPNN NVSS+ERKIASLDLK+GTTLEKRPSLSQVQSRNDFF LIKKKTSM+SSAVL
Sbjct: 421 APLRSPNNINVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMNSSAVL 480

Query: 481 SDSCSSVKSPSIGQSNELTREEIDIPASPRIIENGSVEDRNGDSSEEVQASCDSGEKTES 540
           SDSCSSVKSPSIGQSNELT EE+   ASPR+IENG+VE+RNG+SSEEVQ S DSGEKTES
Sbjct: 481 SDSCSSVKSPSIGQSNELTSEEMG-TASPRVIENGAVENRNGNSSEEVQVSRDSGEKTES 540

Query: 541 HVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCIQPKIF 600
           HVAAESLDEEEAAFLRSLGWDE+CGEDEGLTEEEINSFYREY+NLKPSLK+GRCIQPKIF
Sbjct: 541 HVAAESLDEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYVNLKPSLKIGRCIQPKIF 600

Query: 601 VPSESHEDSK-DGAGSELSSSDSEA 621
           VPSES  DSK DGAGSELSSSDSEA
Sbjct: 601 VPSESRVDSKDDGAGSELSSSDSEA 615

BLAST of CcUC03G051500 vs. ExPASy TrEMBL
Match: A0A6J1FM76 (uncharacterized protein LOC111445235 OS=Cucurbita moschata OX=3662 GN=LOC111445235 PE=4 SV=1)

HSP 1 Score: 994.6 bits (2570), Expect = 1.9e-286
Identity = 549/625 (87.84%), Postives = 574/625 (91.84%), Query Frame = 0

Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQLRNRTSKTASDFDTSRS 60
           MERSEPTLVPEWLR+TGSVTGGGNSNHHF S S HSDVPS SQ RNRTSKT  DFDTSR 
Sbjct: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60

Query: 61  AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDSHDPLGKI 120
           AFLDRT+SSNSRRSSSNGS+KHAYSSFNRGHRDKDREKEKDR NFGDNWDRDSHDPLGK+
Sbjct: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGERELFHRRVATEMKS--HNSNGILSGASVGSSIQKAVF 180
           L NR+DKDALRRSHSMVSRKQ   ELFHRRVAT++K+  ++SNG+  G SVGSSIQKAVF
Sbjct: 121 LPNRVDKDALRRSHSMVSRKQD--ELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVF 180

Query: 181 EKDFPSLGSEDKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGS 240
           EKDFPSLGSE+KQGASEIGRVSSPGLSS VQSLPIGNSALIVGGEGWTSALAEVPSMIGS
Sbjct: 181 EKDFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGS 240

Query: 241 TTGSPSFQQIVPATSGAGPLSITAGLNMAEALVQVPSRARAAPQ---LSVKTQRLEELAI 300
           TTGS SFQQ VPATSGAGPLS+TAGLNMAEALVQ PSRARAAPQ   LSVKTQRLEELAI
Sbjct: 241 TTGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAI 300

Query: 301 KQSRQLIPVTPSMPKAMVIGANAIVLNSSDKSKPKLASRTAELSVTIKGGQPQPLSVHAN 360
           KQSRQLIPVTPSMPKA         LNSSDKSKPKLASRT EL+VT+KGGQP P SVHAN
Sbjct: 301 KQSRQLIPVTPSMPKAS-------ALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHAN 360

Query: 361 QSRGGHVKSDAQKSSHGKFLVLKPVRENGVSLTAKDVSSPTSNANSMAANSQFALAPSVP 420
           QSRGGHVKSDAQKSSHGKFLVLKP RENGVS TAKDVSSPTSN     ANSQFALAPSVP
Sbjct: 361 QSRGGHVKSDAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSN-----ANSQFALAPSVP 420

Query: 421 HPPLRSPNNTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAV 480
           H PLRSPNN+NV+SVERK+ASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAV
Sbjct: 421 HAPLRSPNNSNVASVERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAV 480

Query: 481 LSDSCSSVKSPSIGQSNELTREEIDIPASPRIIENGSVEDRNGDSSEEVQASCDSGEKTE 540
           LSDSCSSVKSPSIGQSNELTREEID PASP ++ENG VE+ NGDSSEEV++SCDSGEKTE
Sbjct: 481 LSDSCSSVKSPSIGQSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTE 540

Query: 541 SHVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCIQPKI 600
           +HVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYM+LKPSLKMGR IQPKI
Sbjct: 541 THVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKI 600

Query: 601 FVPSESHEDSKDGAGSELSSSDSEA 621
            VPSESHEDSKDGAGSELSSSDSEA
Sbjct: 601 SVPSESHEDSKDGAGSELSSSDSEA 611

BLAST of CcUC03G051500 vs. TAIR 10
Match: AT1G36990.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink). )

HSP 1 Score: 406.8 bits (1044), Expect = 3.2e-113
Identity = 296/600 (49.33%), Postives = 369/600 (61.50%), Query Frame = 0

Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLS-QLRNRTSKTASDFDTSR 60
           M++ E +L PEWLRS+G  +GGG+SNH   SSSSHSD  SL    RNR S++ SD D+  
Sbjct: 1   MDKGEHSLAPEWLRSSGHASGGGSSNHLLVSSSSHSDSASLQYNSRNRNSRSKSDVDSIH 60

Query: 61  SAFLDRTSSSNSRRSSSNGSSKHAYSS--FNRGHRDKDREKEKDRLNFGDNWDRDSHDPL 120
           S FLDR+SS+NSRR SSNGS+KHAYSS  FNR  RDKDR ++KDR+++ D WD D+  PL
Sbjct: 61  SPFLDRSSSTNSRRGSSNGSAKHAYSSFNFNRSQRDKDRSRDKDRVSYVDPWDLDTSIPL 120

Query: 121 GKILSNRIDKDALRRSHSMVSRKQGERELFHRRVAT----EMKSHNSNGILSGASVGSSI 180
             IL+ R D D LRRSHSMV+RKQGE       V         S+N NG+LSG S+G+S 
Sbjct: 121 RTILTGR-DPDPLRRSHSMVTRKQGEHLSRGLTVGLNNGGSSNSYNGNGLLSGPSIGNSF 180

Query: 181 QKAVFEKDFPSLGSEDKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVP 240
           Q+  F+KDFPSLG+E+KQ   ++ RVSSPG+SS VQ+LP+GNSALI GGEGWTSALAEVP
Sbjct: 181 QRTGFDKDFPSLGAEEKQNGQDVVRVSSPGISSVVQNLPVGNSALI-GGEGWTSALAEVP 240

Query: 241 SMI-----GSTTGSPSFQQIVPATSGAGPLSITAGLNMAEALVQVPSRARAAPQLSVKTQ 300
           ++I     GS T SP    +      AG L+  +GLNMAEALVQ P+R    PQ SVKTQ
Sbjct: 241 NVIEKACTGSLT-SPKANAV-----SAGTLTGPSGLNMAEALVQAPARTHTPPQGSVKTQ 300

Query: 301 RLEELAIKQSRQLIPVTPSMPKAMVIGANAIVLNSSDKSKPKLASRTAELSVTIKGG--- 360
           RLE+LAIKQSRQLIPV PS PK        + LNSSDKSK K   RT E  +        
Sbjct: 301 RLEDLAIKQSRQLIPVVPSAPK-------GLSLNSSDKSKTKQVVRTGETCLAPSRNALQ 360

Query: 361 QPQPLSVHANQSRGGHVKSDAQKSSHGKFLVLKPVRENGVSLTAKDVSSPTSNANSMAAN 420
           QP  L      +  G +K +       K LVLKP RENGVS   K+  SP++N N+ AA+
Sbjct: 361 QPAVLLGSFQSNPSGQIKPEK------KLLVLKPARENGVS-AVKESGSPSANTNTRAAS 420

Query: 421 SQ-FALAPSVPHPPLRSPNNTNVSSVERKIAS-LDLKSGTTLEKRPSLSQVQSRNDFFNL 480
           SQ  +   S    P+RS N    S  E K AS   + SG T+EK+PS +Q QSR+ F++ 
Sbjct: 421 SQLMSNTQSTQSAPVRSTN----SPKELKGASAFSMISGQTIEKKPSAAQAQSRSAFYSA 480

Query: 481 IKKKTSMSSSAVLSDSCSSVKSPSIGQSNELTREEIDIPASPRIIENGSVEDRNGDSSEE 540
           +K+K + S+S + +D  SS  S S     +L   +  I + P              S  E
Sbjct: 481 LKQKQTASTS-ITTDPVSSSTSASSSVEVKLNSSKDLIASDP--------SSSQATSGVE 540

Query: 541 VQASCDSGEKTESHVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKP 584
           V  S      T    A ++ DEEEA FLRSLGW EN GE E LTEEEI+SF  +Y  L+P
Sbjct: 541 VTDSVQVASHTSGFEATDTPDEEEAQFLRSLGWVENNGE-EYLTEEEIDSFLEQYKELRP 564

BLAST of CcUC03G051500 vs. TAIR 10
Match: AT4G08510.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36990.1); Has 888 Blast hits to 321 proteins in 121 species: Archae - 0; Bacteria - 120; Metazoa - 86; Fungi - 24; Plants - 79; Viruses - 0; Other Eukaryotes - 579 (source: NCBI BLink). )

HSP 1 Score: 302.0 bits (772), Expect = 1.1e-81
Identity = 244/595 (41.01%), Postives = 331/595 (55.63%), Query Frame = 0

Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQLRNRTSKTASDFDTSRS 60
           ME+ EP+LVPEWLRS+G  +G G+SN       S SD  SL   +NR +++ SD D+  S
Sbjct: 1   MEKREPSLVPEWLRSSGHGSGVGSSN-------SLSD--SLRNSKNRNARSRSDADSVGS 60

Query: 61  AFLDRTSSSNSRRSSSNGSSKHAYSS--FNRGHRDKDREKEKDRLNFGDNWDRDSHDPLG 120
            FLDR+SS+N+RR SSNGS+KHAYSS  FNR +RDKDR +EKDR+++ D WD DS  P G
Sbjct: 61  PFLDRSSSTNTRRGSSNGSTKHAYSSFNFNRSNRDKDRSREKDRMSYMDPWDNDSSMPFG 120

Query: 121 KILSNRIDKDALRRSHSMVSRKQGERELFHRRVATE----MKSHNSNGILSGASVGSSIQ 180
             L  R  ++ LRRSHSM +RKQG        V  +    + + N +GIL G S   S +
Sbjct: 121 TFLIGR-GEEPLRRSHSMTTRKQGNHLAQGFTVGYKNGGNINTFNGHGILPGTSPVKSSK 180

Query: 181 KAVFEKDFPSLGSEDKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPS 240
           +  F KDFP L  E++ G  ++ R+SSPG S   QSL + N ALI+ GEGWTSALAEVP+
Sbjct: 181 RMGFNKDFPLLRGEERNGGPDVVRISSPGRSPTAQSLSVANPALII-GEGWTSALAEVPN 240

Query: 241 MIGSTTGSPSFQQIVPATSGAGPLSITAGLNMAEALVQVPSRARAAPQLSVKTQRLEELA 300
           +I  + G+ S   +  + + +GP    A  NMAEALVQ P R    PQ     Q LE+ A
Sbjct: 241 VIEKSGGAESHANVGNSATLSGP----ACRNMAEALVQAPGRTGTPPQ----AQTLEDRA 300

Query: 301 IKQSRQLIPVTPSMPKAMVIGANAIVLNSSDKSKPKLASRTAELSVTIKGGQPQPLSV-- 360
           I+QSRQLIPV PS PK         V NSSDKSK K   R+ E  +       Q  SV  
Sbjct: 301 IRQSRQLIPVVPSAPKGS-------VHNSSDKSKTKPMFRSGETGLASSRNTQQQSSVML 360

Query: 361 -HANQSRGGHVKSDAQKSSHGKFLVLKPVRENGVSLTAKDVSSPTSNANSMAANSQFALA 420
            +   + G  +K D  K    K ++LKP RENG       V +  S  NS  A SQ   A
Sbjct: 361 GNMQSNPGSQIKPDTTK----KLVILKPARENG-------VVAGGSPPNSRVAASQPTTA 420

Query: 421 PSVPH-PPLRSPNNTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSM 480
           PS      +RS N       + + AS+++ +G   EK+ SL+Q QSR+ F++ +K+KT  
Sbjct: 421 PSTQFTASVRSTNGPR----DLRGASVNMLAGKAAEKKLSLAQTQSRHAFYSALKQKTCT 480

Query: 481 SSSAVLSDSCSSVKSPSIGQSNELTREEIDIPASPRIIENGSVEDRNGDSSEEVQASCDS 540
           + S   S + S + S    Q+N         P+SP+  E   +        E V+   + 
Sbjct: 481 NISTDPSKTSSCILSSVEEQANSSKELVASDPSSPQAAERDEI-------MESVEKVSNV 540

Query: 541 GEKTESHVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSL 586
            E+     +A   D +EAAFL+SLGWDEN  ++   T EE+  + +++   KPSL
Sbjct: 541 AERISRFESAVRPDPKEAAFLKSLGWDENDSDEYTHTMEEMREWCKKF---KPSL 544

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008460470.11.4e-29991.96PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X2 [Cuc... [more]
XP_038907228.12.0e-29891.30mediator of RNA polymerase II transcription subunit 1 isoform X2 [Benincasa hisp... [more]
XP_008460469.15.8e-29891.52PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cuc... [more]
XP_038907227.18.3e-29790.87mediator of RNA polymerase II transcription subunit 1 isoform X1 [Benincasa hisp... [more]
XP_011655200.11.1e-29390.68mediator of RNA polymerase II transcription subunit 1 isoform X2 [Cucumis sativu... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3CC426.6e-30091.96mediator of RNA polymerase II transcription subunit 1 isoform X2 OS=Cucumis melo... [more]
A0A5D3DT292.8e-29891.52Mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo... [more]
A0A1S3CDT92.8e-29891.52mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo... [more]
A0A0A0KN632.3e-29290.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G387430 PE=4 SV=1[more]
A0A6J1FM761.9e-28687.84uncharacterized protein LOC111445235 OS=Cucurbita moschata OX=3662 GN=LOC1114452... [more]
Match NameE-valueIdentityDescription
AT1G36990.13.2e-11349.33unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXP... [more]
AT4G08510.11.1e-8141.01unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 478..538
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 512..538
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 597..620
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 478..494
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 345..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 345..363
NoneNo IPR availablePANTHERPTHR34112C-JUN-AMINO-TERMINAL KINASE-INTERACTING PROTEINcoord: 1..619

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC03G051500.1CcUC03G051500.1mRNA