CcUC03G047460 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GCCCCAATTACTCTGCGTCACATAAACAAATAAAGATATCTACAGCATAATTCTCCATTTCTCACTAGAAAAACCTTTAACTTCGTTAAAAAAAGGTATTCAAAAGGCTGGTGGTAGAAATGGCACAAGCTATTGCATCAATGGCAGGGCTCTGTGGTTCCTCTCAGGCTGTATTGGAAGGTAGCCTTCAAATTAGTGGCTCATCCCGCTTGAGTGTGGCTGGCAGCAGCAGGCCCTCTCTCCCCCGGTCTGGGTTGATGATCAAAGCCCAGCAAGTTCCTGCTGAGCCTGAGACCAGCCGCAGGGCTGTTCTTGGTTTGGTCGCCGCCGGTCTCGCCTCCGGCTCTTTCGTTCAAGCCGTTCTCGCTGATGCTAAGCCCATCAAGCTCGGTCCTCCTCCCCCTCCCTCCGGTGGACTCCGTAAGTGATTCATCATTAAATTTACCGTAATCCATCAACTTAACTGAGAGCTCATTCACGGGCAATGTTTTGATTGTTGCAGCTGGGACTTTGAACTCGGACCAGCCAAGGGACTTGGACCTGCCACTGAAAGAGAGGTTCTTCTTGCAACCACAAAGTCCAGAATTGGCTGTGGCGAGGGCAAAAGAGTCTGCCAAGGACATCATCAATGTAAAGGGGCAGATAGAGAAGAAGGCTTGGCCATTTGTCCGTGATGACCTTCGTCTTAAGGCAGAGTACCTTCGTTATGATCTCAAGACAATCATTTCTGCCAAGCCTAAGGAAGAGAAGCAGGCCCTTAAGGACCTCACAGGAAAGCTCTTCCAAGACATCAACAACGTTAGTATAGTTTCATTAAATTTTGGCATTGATTTGATTGCATGTCTCTTCTATTGTTTCTAATGTTTGCATTTTCTCCACAAATCAACTGGGAAACTTGCAGTTGGATTATGCAGCAAAGATTAAGAGCAGCTCAGAAGCAGAGAAGTATTATGCTCAGACTGTGTCAACCCTCAACGATGTCCTCTCCAAGATTGGTTAGAAGAAGAGCATTTTCTGTTAATTTGATGTAAAATTATTTGTGAAGATATGCGAGACTCTCCAGTTTGAACCAATGTTATATCCACGGAATTTGGTTTCACCCCTCAACTCGAACTCTTTCAAATTTCTTATTGCTTTGCTTATTTTGTTCAGTGACACTACAGTTTTCACTACTCTTACATTTGGTATGGCATTAATAGCAATGCAACCAGAACATACTTCCATAGCCGTAAGGGATCCTTCGATTTGTAGTAATCCTAGATTACCGCTTCATGGACATCCAAATTACTATGTGTGGATTGTGGTAATTTTAAAATAGTCGGGCATCCAAAGATATAGGACATCCTAAAATCACCCAATTTCAAGATTGCCTTAGAAATCGATGCAATTACACTCCCTATCTTTAGCCCTAAATTATTAGCCACCACATTACTTTCGTTCTCTCATCACTTTTAATTAAGATATTTTTCCATCTATACAACACTCTCACATGGAACTCTAATGTCTATCTCTAAGGTATTTTTCATGTTGCTTTTCTTGCTTTCTTCTCCATTCTACTTATTTTTTTTCTACCTTTTACATCTTTTTTATTGGGAGTTGTCTATTTATCTTTTATCATTTTTTTGAATTATGTCGAGACCTTACTTTGAAATTAAAGATCTCATTGTCTCTCATTTAGATGTGTCTAGTCTTCACTACAATCAAACATAAGAAGAAACTGGCTTGGATCTATACATCATGGTGAAATTGGCTCCAAGCCCATTAACAGTTGTATATGATTTCTCATACAGAATCAGATTTAGCGCAAAAAGTTCTTGCCAGAATCATTTAATAAAGACTTATTACATGATCAGTTTTTTAAAGTTGCTTCGAATACGATTCGTAGCATATTTTACCAATGGATTTTCCACTGAATCTTTACTAAACAGAAGTTTCAGAAAAAATGAAAAGGCAACCCATATTTTGTTTTGCCTATGTCGGTGTGGTATGATATATATTGTCTGGCAATTGCTGAAAAAGGAAAACGGTATATATTCCCAATGTGAACTAAGACGTGGACTCAAAATCTCTTATAAATCAATAAATTAGAGGTTATATGTCATTACAGGAAACTGCTGTCAATTGGGTTATACATGTTGTGGTTCAGAAGGATTTGCTTTGGGCTTCCTCTGTTCTTCTCTATAAGCTGCTGTTGCAGAAACGTAATAAGCGACCGTAG GCCCCAATTACTCTGCGTCACATAAACAAATAAAGATATCTACAGCATAATTCTCCATTTCTCACTAGAAAAACCTTTAACTTCGTTAAAAAAAGGTATTCAAAAGGCTGGTGGTAGAAATGGCACAAGCTATTGCATCAATGGCAGGGCTCTGTGGTTCCTCTCAGGCTGTATTGGAAGGTAGCCTTCAAATTAGTGGCTCATCCCGCTTGAGTGTGGCTGGCAGCAGCAGGCCCTCTCTCCCCCGGTCTGGGTTGATGATCAAAGCCCAGCAAGTTCCTGCTGAGCCTGAGACCAGCCGCAGGGCTGTTCTTGGTTTGGTCGCCGCCGGTCTCGCCTCCGGCTCTTTCGTTCAAGCCGTTCTCGCTGATGCTAAGCCCATCAAGCTCGGTCCTCCTCCCCCTCCCTCCGGTGGACTCCCTGGGACTTTGAACTCGGACCAGCCAAGGGACTTGGACCTGCCACTGAAAGAGAGGTTCTTCTTGCAACCACAAAGTCCAGAATTGGCTGTGGCGAGGGCAAAAGAGTCTGCCAAGGACATCATCAATGTAAAGGGGCAGATAGAGAAGAAGGCTTGGCCATTTGTCCGTGATGACCTTCGTCTTAAGGCAGAGTACCTTCGTTATGATCTCAAGACAATCATTTCTGCCAAGCCTAAGGAAGAGAAGCAGGCCCTTAAGGACCTCACAGGAAAGCTCTTCCAAGACATCAACAACTTGGATTATGCAGCAAAGATTAAGAGCAGCTCAGAAGCAGAGAAGTATTATGCTCAGACTGTGTCAACCCTCAACGATGTCCTCTCCAAGATTGTTTTCACTACTCTTACATTTGGTATGGCATTAATAGCAATGCAACCAGAACATACTTCCATAGCCGTAAGGGATCCTTCGATTTGTAGTAATCCTAGATTACCGCTTCATGGACATCCAAATTACTATGTGTGGATTGTGGAAACTGCTGTCAATTGGGTTATACATGTTGTGGTTCAGAAGGATTTGCTTTGGGCTTCCTCTGTTCTTCTCTATAAGCTGCTGTTGCAGAAACGTAATAAGCGACCGTAG ATGGCACAAGCTATTGCATCAATGGCAGGGCTCTGTGGTTCCTCTCAGGCTGTATTGGAAGGTAGCCTTCAAATTAGTGGCTCATCCCGCTTGAGTGTGGCTGGCAGCAGCAGGCCCTCTCTCCCCCGGTCTGGGTTGATGATCAAAGCCCAGCAAGTTCCTGCTGAGCCTGAGACCAGCCGCAGGGCTGTTCTTGGTTTGGTCGCCGCCGGTCTCGCCTCCGGCTCTTTCGTTCAAGCCGTTCTCGCTGATGCTAAGCCCATCAAGCTCGGTCCTCCTCCCCCTCCCTCCGGTGGACTCCCTGGGACTTTGAACTCGGACCAGCCAAGGGACTTGGACCTGCCACTGAAAGAGAGGTTCTTCTTGCAACCACAAAGTCCAGAATTGGCTGTGGCGAGGGCAAAAGAGTCTGCCAAGGACATCATCAATGTAAAGGGGCAGATAGAGAAGAAGGCTTGGCCATTTGTCCGTGATGACCTTCGTCTTAAGGCAGAGTACCTTCGTTATGATCTCAAGACAATCATTTCTGCCAAGCCTAAGGAAGAGAAGCAGGCCCTTAAGGACCTCACAGGAAAGCTCTTCCAAGACATCAACAACTTGGATTATGCAGCAAAGATTAAGAGCAGCTCAGAAGCAGAGAAGTATTATGCTCAGACTGTGTCAACCCTCAACGATGTCCTCTCCAAGATTGTTTTCACTACTCTTACATTTGGTATGGCATTAATAGCAATGCAACCAGAACATACTTCCATAGCCGTAAGGGATCCTTCGATTTGTAGTAATCCTAGATTACCGCTTCATGGACATCCAAATTACTATGTGTGGATTGTGGAAACTGCTGTCAATTGGGTTATACATGTTGTGGTTCAGAAGGATTTGCTTTGGGCTTCCTCTGTTCTTCTCTATAAGCTGCTGTTGCAGAAACGTAATAAGCGACCGTAG MAQAIASMAGLCGSSQAVLEGSLQISGSSRLSVAGSSRPSLPRSGLMIKAQQVPAEPETSRRAVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDQPRDLDLPLKERFFLQPQSPELAVARAKESAKDIINVKGQIEKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKIVFTTLTFGMALIAMQPEHTSIAVRDPSICSNPRLPLHGHPNYYVWIVETAVNWVIHVVVQKDLLWASSVLLYKLLLQKRNKRP Homology
BLAST of CcUC03G047460 vs. NCBI nr
Match: XP_038894859.1 (oxygen-evolving enhancer protein 3, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 416.4 bits (1069), Expect = 2.2e-112 Identity = 221/230 (96.09%), Postives = 228/230 (99.13%), Query Frame = 0
BLAST of CcUC03G047460 vs. NCBI nr
Match: XP_008441634.1 (PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Cucumis melo] >KAA0056901.1 oxygen-evolving enhancer protein 3-2 [Cucumis melo var. makuwa] >TYJ99404.1 oxygen-evolving enhancer protein 3-2 [Cucumis melo var. makuwa]) HSP 1 Score: 415.2 bits (1066), Expect = 4.9e-112 Identity = 219/230 (95.22%), Postives = 228/230 (99.13%), Query Frame = 0
BLAST of CcUC03G047460 vs. NCBI nr
Match: XP_004145092.1 (oxygen-evolving enhancer protein 3-2, chloroplastic [Cucumis sativus] >KGN64579.1 hypothetical protein Csa_013929 [Cucumis sativus]) HSP 1 Score: 410.6 bits (1054), Expect = 1.2e-110 Identity = 217/230 (94.35%), Postives = 226/230 (98.26%), Query Frame = 0
BLAST of CcUC03G047460 vs. NCBI nr
Match: XP_023542762.1 (oxygen-evolving enhancer protein 3-2, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 403.7 bits (1036), Expect = 1.5e-108 Identity = 215/227 (94.71%), Postives = 224/227 (98.68%), Query Frame = 0
BLAST of CcUC03G047460 vs. NCBI nr
Match: XP_022954636.1 (oxygen-evolving enhancer protein 3-2, chloroplastic-like [Cucurbita moschata] >KAG6573219.1 Oxygen-evolving enhancer protein 3-2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 402.9 bits (1034), Expect = 2.5e-108 Identity = 215/227 (94.71%), Postives = 223/227 (98.24%), Query Frame = 0
BLAST of CcUC03G047460 vs. ExPASy Swiss-Prot
Match: Q41932 (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBQ2 PE=1 SV=2) HSP 1 Score: 293.5 bits (750), Expect = 2.8e-78 Identity = 159/230 (69.13%), Postives = 197/230 (85.65%), Query Frame = 0
BLAST of CcUC03G047460 vs. ExPASy Swiss-Prot
Match: P12301 (Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSBQ PE=1 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 1.4e-77 Identity = 159/231 (68.83%), Postives = 195/231 (84.42%), Query Frame = 0
BLAST of CcUC03G047460 vs. ExPASy Swiss-Prot
Match: Q9XFT3 (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBQ1 PE=1 SV=3) HSP 1 Score: 272.3 bits (695), Expect = 6.7e-72 Identity = 157/228 (68.86%), Postives = 187/228 (82.02%), Query Frame = 0
BLAST of CcUC03G047460 vs. ExPASy Swiss-Prot
Match: P83646 (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_025465 PE=1 SV=2) HSP 1 Score: 256.5 bits (654), Expect = 3.8e-67 Identity = 145/231 (62.77%), Postives = 170/231 (73.59%), Query Frame = 0
BLAST of CcUC03G047460 vs. ExPASy Swiss-Prot
Match: Q0D5P8 (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0544800 PE=2 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 3.8e-67 Identity = 145/231 (62.77%), Postives = 170/231 (73.59%), Query Frame = 0
BLAST of CcUC03G047460 vs. ExPASy TrEMBL
Match: A0A5A7UTR7 (Oxygen-evolving enhancer protein 3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006220 PE=3 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 2.4e-112 Identity = 219/230 (95.22%), Postives = 228/230 (99.13%), Query Frame = 0
BLAST of CcUC03G047460 vs. ExPASy TrEMBL
Match: A0A1S3B3E7 (oxygen-evolving enhancer protein 3-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485714 PE=3 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 2.4e-112 Identity = 219/230 (95.22%), Postives = 228/230 (99.13%), Query Frame = 0
BLAST of CcUC03G047460 vs. ExPASy TrEMBL
Match: A0A0A0LUC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G066480 PE=3 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 5.8e-111 Identity = 217/230 (94.35%), Postives = 226/230 (98.26%), Query Frame = 0
BLAST of CcUC03G047460 vs. ExPASy TrEMBL
Match: A0A6J1GRF4 (oxygen-evolving enhancer protein 3-2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456840 PE=3 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 1.2e-108 Identity = 215/227 (94.71%), Postives = 223/227 (98.24%), Query Frame = 0
BLAST of CcUC03G047460 vs. ExPASy TrEMBL
Match: A0A6J1JZ74 (oxygen-evolving enhancer protein 3-2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111490175 PE=3 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 2.7e-108 Identity = 215/229 (93.89%), Postives = 223/229 (97.38%), Query Frame = 0
BLAST of CcUC03G047460 vs. TAIR 10
Match: AT4G05180.1 (photosystem II subunit Q-2 ) HSP 1 Score: 293.5 bits (750), Expect = 2.0e-79 Identity = 159/230 (69.13%), Postives = 197/230 (85.65%), Query Frame = 0
BLAST of CcUC03G047460 vs. TAIR 10
Match: AT4G21280.1 (photosystem II subunit QA ) HSP 1 Score: 276.9 bits (707), Expect = 1.9e-74 Identity = 157/227 (69.16%), Postives = 187/227 (82.38%), Query Frame = 0
BLAST of CcUC03G047460 vs. TAIR 10
Match: AT4G21280.2 (photosystem II subunit QA ) HSP 1 Score: 272.3 bits (695), Expect = 4.8e-73 Identity = 157/228 (68.86%), Postives = 187/228 (82.02%), Query Frame = 0
BLAST of CcUC03G047460 vs. TAIR 10
Match: AT3G01440.1 (PsbQ-like 1 ) HSP 1 Score: 63.5 bits (153), Expect = 3.4e-10 Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 0
BLAST of CcUC03G047460 vs. TAIR 10
Match: AT1G14150.1 (PsbQ-like 2 ) HSP 1 Score: 60.1 bits (144), Expect = 3.7e-09 Identity = 29/112 (25.89%), Postives = 64/112 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|