CcUC03G047440 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC03G047440
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr03: 5244605 .. 5248023 (+)
RNA-Seq ExpressionCcUC03G047440
SyntenyCcUC03G047440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATCCTCTTATGCAAAAGTAAAGCTGGTGAACAGAAGAACTCTGCCGACTCAGGCGACTGGTGGCCGAAGAACATGGTCTTGTGATGTATCAATGGCACCCGGAGGCATAAACTGCCACATGGATACTCCTGGATATCCAATCACAGGTACCAATTTCCCCCCAACAACCTGATTTGGAGAAGCAAATGCAGCAGGAATTGCAGGAGGGTGAGGCAAGAAGGTTGGTTGTGTATTGAAGGCCTTCATTTTCTGTTCAAGGCTGTCTTTTGCTTCTTTCAGCCTCTGTTTTTCGTCTCGTAGTTCATTCTTTTCAGCCTACATAAAGAAAGCTTTACTCAAAATAACATCAAACATCAATTGAAGTTATATCCAATGTTGACAAGTACAAACCACATAAGTTTTGAAAACTTACAATACAGGAACTATGAACTTAAGAATGATATATATAAAATAAATAAAATTAAAATAAAAATCAAATAAAATAAAAAGAAGCCAGATGAACCTTCATTTCATTAATCTTCTCCAAAGAACTCTCATTAGACTCCTTCAGCTTCTGAGCCTCATCCCTTAGCTGTATAATCATTCGAACTGCATCACCCAAAATAACAGACTTGTCAATTTTGGGAGGCCTTCCATGATTGAGGATGGAATTCAATTCCAGAAACCTTTAATGGACAAAGAGAAAATATGAGGTCTGGGAGGGGAGCGGAGCAGAGCCAAGAATGGCGAAAAAGACGAATGTAACAGAATTTAGATGCCTGTCATTTAGTTTATCCCTCCTCATTTTTTCTTTATGTGCCTTGGACTCAAATGCATTTGATCCAGAGCTCATCCTGTCAACAGTAAGAACACTACCATGCTCTTGTAAGGGCATATCCAATATAATATGCTAAAACTGAATGCTACAGCATTAGAACATAAACAATGATGCTAATCCTTGTAATTTAAAATAACCCAAGTTGGGAACTTGGGTATCAATAACTGCTCACCTTTTCCTGGACCCAGATTCTTTTACATCGTCTGCCATTCCAAGTGGGTCATCGAAGTCTGCCCTGAAAAGCTAACAACAGAAGAGTGAGTTTTTTAATATAGGTTAAATTAAAAGTTTAGTTTATGAACTTTAAGTTTGTGTCTATTTGGTCTTTGAATTTTAAAATGTGTCTCATAGGATCTTACAATTTCAACTTTGTGTACAATAGATCTTGAAATTTCAATTTTGTGTCAAATAGATTCCTTGCCTATTCGACATTTTTTTTAAGTTTAAAACCTACTAGACACAAAATTGAAATTTTAGAGGCCTATTAGACATATAGTTCGATTTTATATATTATATATTAATTCATCTTTTAAATTCAAACAAGGTCAGAGACCTATTAAATACATAATTGAAAGGTCCAGTACTTATTAAATATTTTTAAAGTTTAATGACTTATTAGACGTTTTAATGTTTAGAGAACCTTCAAATAAAAGCTTCAAAGATTAAGAACTCAACTAAATATTTCTCTATCACGTAAAAGGACGCAGAAAACAGAGTTAAGCTTTCGAATCAATAGGGTATTGCAAAATTGAGGGAAAATAGTTTTCAGAGGTTTGAACTCAAAACCTATATCTAATATTATATTAAATCACCGCTAAATCAAAAGAAAAAAATTATAGGTTAGACAAATTAGTCACGAGACTTAATACATGAACACCAAATATAAAACAGAGAAGAAAGCAATAACGAAAAAGCTTGACTTCAAGAACTTCACTTTGATGCCATGTTCAGAAACTATTAGAATAAAGGCTGGTTTGGAGCATTCATGAGAAGAATGTCTAGATGAAATACTGGTAGAACTCCTAGCCAACCTAAGACGTTTTTAAATCAAATTTTACTCAATGAAACAAAGTTAATGAAACAAAGTTAAATTACAGAAAATACCTTTGAACTTATTTGCATAAAAATACCCCTTCACAATATTATGGAGATATTGGTACATACCCCTATTTAGGGGACCACTCAAAATTTGGCATTTTGCTGACGCCATCAGATGGTAAATTTACCATTTTAATCTTTCTTCCTTCTTTTTCTGTAGCTTTTTTTTCTTTTTCTTTTTCCTGCTTTTCTTCTTCTTTTTTCTTTTTCTTTTTTTTTTTTTTTCATTTCCGGTGATTTCTTTTGCTTATGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCTTCTTCTTTTTTTTTTTTCTTTTTTTTTTTTTTTCATTTCCGGTGATTTCTTTTGCTTATGTCACCCTCTGTTTTCTGGCGGTTTTCCTTTTTTCTTTTCCGGAGATTTTTGTTTCTATTGCTCTCTTTTTTTTTTTTTCACTTTTTGGCGAGATTTCCTTCTCGCCCTTTTGTTTTTCAAATCATATAGTAAGTTGGAGCATGAATCAGAAGAAGTGAGAGGGAGACCAAGAATTAAGAGAAAGAGGCGAGAGTGAGAATTCGAATGAAAGAAAAAACTCAAAGGAAAAAGCAGAAACGGGAGGAAGAAATTAGATGAAGAATTCAAACGAATGGAAAAAAATCAAGGAAAAATGAAGGAGAGAGAAATGAGATGAAAGAGCGAGAGGAATGAGTCAAGAACAAGAGGAAAAAGCAAGAAATCTAGGTTGCGTCCGGCCTCGCGCATGCAAAACACGCACAGCTGACATAAGTAAAAGGATAAATTTTGAGCGTTTATGAAAGTGAGGCCAAATTTTGAATGGCCTAGCATCCGTACACATTTTCCAATATTACGCTTTAACCTTTCATAAATATTTTGAAATTACCCGATTCCAGGACCTGATTCTGGTTCAACATTCTATTAGATTTCTATAACAGGTATATGTTTTAAACAAATGCAAATATCAGAAATACTCTTCGTAACTTAAACATGAAGAACTACATAGTCCCATAATCAAGCATGTAAGTAACATCCACATGAAAACCCAGAAGAAAATATTTGTAAAAGAGGAAAACAAAGCAGAAAACTGAATTGCCTATGCCGAAACAGAAGTACAACTCAACCCATTCACTTCAACAACATACAATCAACCAGAGATAAATGCGGCTTAATTAATTATCTATCTGTTAGAACACCAACAAGAGCAGAAAAGAACAAAAACCTGAAGGATGCAGTGAAATCGCAAGAAGGCAAAGTGAAAGAGGGAAGATCCAGCGAAGGTAGGTCACCACCGGGGACAGGAATGTCCTCAATCATACCGTAA

mRNA sequence

GAATCCTCTTATGCAAAAGTAAAGCTGGTGAACAGAAGAACTCTGCCGACTCAGGCGACTGGTGGCCGAAGAACATGGTCTTGTGATGTACCAATTTCCCCCCAACAACCTGATTTGGAGAAGCAAATGCAGCAGGAATTGCAGGAGGGTGAGGCAAGAAGGTTGGTTAGAAAATATGAGGTCTGGGAGGGGAGCGGAGCAGAGCCAAGAATGGCGAAAAAGACGAATGTAACAGAATTTAGATGCCTGTCATTTAGTTTATCCCTCCTCATTTTTTCTTTATGTGCCTTGGACTCAAATGCATTTGATCCAGAGCTCATCCTAACACCAACAAGAGCAGAAAAGAACAAAAACCTGAAGGATGCAGTGAAATCGCAAGAAGGCAAAGTGAAAGAGGGAAGATCCAGCGAAGGTAGGTCACCACCGGGGACAGGAATGTCCTCAATCATACCGTAA

Coding sequence (CDS)

GAATCCTCTTATGCAAAAGTAAAGCTGGTGAACAGAAGAACTCTGCCGACTCAGGCGACTGGTGGCCGAAGAACATGGTCTTGTGATGTACCAATTTCCCCCCAACAACCTGATTTGGAGAAGCAAATGCAGCAGGAATTGCAGGAGGGTGAGGCAAGAAGGTTGGTTAGAAAATATGAGGTCTGGGAGGGGAGCGGAGCAGAGCCAAGAATGGCGAAAAAGACGAATGTAACAGAATTTAGATGCCTGTCATTTAGTTTATCCCTCCTCATTTTTTCTTTATGTGCCTTGGACTCAAATGCATTTGATCCAGAGCTCATCCTAACACCAACAAGAGCAGAAAAGAACAAAAACCTGAAGGATGCAGTGAAATCGCAAGAAGGCAAAGTGAAAGAGGGAAGATCCAGCGAAGGTAGGTCACCACCGGGGACAGGAATGTCCTCAATCATACCGTAA

Protein sequence

ESSYAKVKLVNRRTLPTQATGGRRTWSCDVPISPQQPDLEKQMQQELQEGEARRLVRKYEVWEGSGAEPRMAKKTNVTEFRCLSFSLSLLIFSLCALDSNAFDPELILTPTRAEKNKNLKDAVKSQEGKVKEGRSSEGRSPPGTGMSSIIP
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC03G047440.1CcUC03G047440.1mRNA