CcUC03G046180 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC03G046180
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	squamosa promoter-binding-like protein 13A
Location	CicolChr03: 4141382 .. 4144169 (-)
RNA-Seq Expression	CcUC03G046180
Synteny	CcUC03G046180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACTTTTCTTTTGCCTCCTTCACAATCTGCTTTATTTGGATTTAATGGAATCTATGTCAGTGAATGAACTGGAAAGAACAAACCAATCCACTTCTGCTGCACTAGTTTGGGGAACAATCTCTTACCATTCATTCACTACTCTCTCTCTCCTTTTCATTTAATTTAATTTAATTTTCCTCTCCCTCTCTCCCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTTTTGGAACTTCTAAGTTCCAATCTTCTTGGAAGGCCAACATCCAACCCCTTTCAAAGTAAGCATTTTTTTGAGTTAGCTTGAAATTTTGAGTAAATGGGGTCGGTGTATGGATCTTGTAGCTTCAAGGGAAAGTAATTTTGAGTTTTTTTTTTTTTTTTCCTTGTAGAAGAGCTTGAGAAAAATGGCATCATCTACCTCAGGATCATCAAAGAGAGCCAGAGGAACTCATAATGGTAACACTCAACCAGTTTCTTGCCTTGTAGATGGCTGCAATTCAGATCTAAGCATCTGTAGAGATTACCATAGGCGCCATAAAGTTTGTGAGTTGCATTCAAAAACTCCTCAAGTCACAATTGGTGGTCTCAAGCAGAGATTTTGCCAGCAGTGTAGTAGGTAAAACTTTGGGACTTGGATTTCTTTTTTTGGTCTTTTTTTTCTTTTGCTAATCATGGTATGTCTCTGCTCTGTTCTCTGTCAACAACTTTTGAGCACAACCCATTATTTTATTCTTGAAGAAAAGCAACTCCATGGAACATTTTTATACTTACAAAGAAAATGCATAGTTTTGATTTTCCTTTTTGGATGGAAATGGGAACTGTTGGGTGTTTTTATGTGAATAAATTTGTCCTCTTTCTGTATGGTTAAAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAGAAGGTTTGGCTCTGGAATTAGATGTGCTTTTGAGTCTTTTCATGAGAAAGTTTTCTGAGTTTCTACACAGAATAAAAAGTTGAGATAAGTAGACAATGAAAGTTCCAAAACTTGCAGAAAAAATTTACCCAATTTTGGTATCTTAAATTTGAAGGCATTGTTGAATTCCCATCTGCTCTGTTTTGCAATGCTCTGTTTTTTTTTCTTTTTCTGGGTGTTTGTTTAGGTTTCATTCACTTGAGGAATTTGACGAAGGAAAGAGAAGCTGCCGCAAACGACTTGATGGCCATAACCGGCGCCGGAGAAAGCCTCAAACTGACCTCTTGCCTCGATCTGCCGCTCCTTTCTCCTACCATCAAGGTCAGAACTTTTTTTTCCTTTTTCTTGCTTTTAACATAGAAATCGATAATTCAAAAATTTTGGATAGTTGCAGAAATTACACCTCTAAATAATAATGATTAAGCTTTTAAAATTATATAATTTTTATAATCACGAGAGTTTGAGGGTCCAATTTTAGAATTTGTATAAATTTGAGAGCTCAAATTTTAGCACTAAAGGTTTTAGTGTATAATTGTATCTACCACTATAAATTACCTTACAATTTGTTTCAAAAATCAATTTTTATTCAATTTTAACTTTTAATTTCGTTAAATTACAACGAAGTATGGATAAATTTTACAAACCTAACTTCAAACTTTAAAAAATGCTACAATTTTAATTTTTTTAGAAATGTTTTTACGCCAAATACCGTCAAAAAAAAATACTACAGTGTAAAACATGAGAAAAATATGAAATTGATAAAATTTTAGATATATATAATATTTGTAAACTGATCAAAATTATTTTTTTGTAGAATTTTAAATGGTAAGATTTTTACACCGTTTTTTTTTTTTTTTTTTTGGGTTAAAATTAGATAGAAAAGTAGCAAAATTTAAATTGAAGTAAAAATTGCAACACTTTCCAAGTCTAGTTTGATTAAATTATTTCTCTAGGTTAATTGATTTTCTCTAATCTTAAAAGAAAAATTGTATAGTATTAAATTTTCATCCACAACATTAATATCAATTCATTTCTATTTAAATCGATTCAATGTTTACATACAAAATCAACCAACATTCTCGATATATTATTAAAAAAAAAAATCATAAAACATATGTGTGTTCCATTTGATTGAGACCTCAACAAGTTTATTGGTTGATTTACAATGGAAAAATCTAAAAGCAATTCTTTCAGGTCCCCAGTTGTTGCCATTTACAAGCTCACAAGTTTTCCCATCGACCGCCGTGAGCAGCCACGGGTGGTCGTCTGGCGTCAGCGAAGGTGCAATAGATCCCGCCGCCCACCACAACCACAACCCACAACTAAACTTCCTCGAAAAACAGAGCCTATTTGCAAAAGCATCCGACCAAAGCAACAACAACAACTACAAACCCTCGCAGCCATTAGGGTTCTTGCACGGCGGCGGCGGCGGCAGCCGGAACAAGATGATTTACGACAGGTTCAGAATTGGGGTTAATGAATCAGATTGTGCTCTCTCTCTTCTGTCATCACCACCGACACAGATTCAGAGTGATCATCAACCACAGCAACACCGTAACGCCGCCATTTCTCTGCTCCATCCATTAACCTATCAAAACACTTTTGAGAATTCTGATTCTTCTTCCATTCAGATTCCAAATGACACTCATCATCATCATCATCATCATCATCCTCATGGGGCTCTTAATTTCCCCGGAATCTTTGGAATTTCCTCCGACAATCCTGGAAATCAATCCCCTTCTACTCTTCCTTTTCACTGGGAGTAAAAAACCAAATTATGATCGTTATCTTAATTTTGTTGATTTCATTTAATCAACCCCGATTTGTAGACTCCTTTCC

mRNA sequence

GGACTTTTCTTTTGCCTCCTTCACAATCTGCTTTATTTGGATTTAATGGAATCTATGTCAGTGAATGAACTGGAAAGAACAAACCAATCCACTTCTGCTGCACTAGTTTGGGGAACAATCTCTTACCATTCATTCACTACTCTCTCTCTCCTTTTCATTTAATTTAATTTAATTTTCCTCTCCCTCTCTCCCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTTTTGGAACTTCTAAGTTCCAATCTTCTTGGAAGGCCAACATCCAACCCCTTTCAAAAAGAGCTTGAGAAAAATGGCATCATCTACCTCAGGATCATCAAAGAGAGCCAGAGGAACTCATAATGGTAACACTCAACCAGTTTCTTGCCTTGTAGATGGCTGCAATTCAGATCTAAGCATCTGTAGAGATTACCATAGGCGCCATAAAGTTTGTGAGTTGCATTCAAAAACTCCTCAAGTCACAATTGGTGGTCTCAAGCAGAGATTTTGCCAGCAGTGTAGTAGAAGGTTTGGCTCTGGAATTAGATGTGCTTTTGAGTCTTTTCATGAGAAAAAAAAATTTACCCAATTTTGGTATCTTAAATTTGAAGGCATTGTTGAATTCCCATCTGCTCTGTTTTGCAATGCTCTGTTTCATTCACTTGAGGAATTTGACGAAGGAAAGAGAAGCTGCCGCAAACGACTTGATGGCCATAACCGGCGCCGGAGAAAGCCTCAAACTGACCTCTTGCCTCGATCTGCCGCTCCTTTCTCCTACCATCAAGGTCCCCAGTTGTTGCCATTTACAAGCTCACAAGTTTTCCCATCGACCGCCGTGAGCAGCCACGGGTGGTCGTCTGGCGTCAGCGAAGGTGCAATAGATCCCGCCGCCCACCACAACCACAACCCACAACTAAACTTCCTCGAAAAACAGAGCCTATTTGCAAAAGCATCCGACCAAAGCAACAACAACAACTACAAACCCTCGCAGCCATTAGGGTTCTTGCACGGCGGCGGCGGCGGCAGCCGGAACAAGATGATTTACGACAGGTTCAGAATTGGGGTTAATGAATCAGATTGTGCTCTCTCTCTTCTGTCATCACCACCGACACAGATTCAGAGTGATCATCAACCACAGCAACACCGTAACGCCGCCATTTCTCTGCTCCATCCATTAACCTATCAAAACACTTTTGAGAATTCTGATTCTTCTTCCATTCAGATTCCAAATGACACTCATCATCATCATCATCATCATCATCCTCATGGGGCTCTTAATTTCCCCGGAATCTTTGGAATTTCCTCCGACAATCCTGGAAATCAATCCCCTTCTACTCTTCCTTTTCACTGGGAGTAAAAAACCAAATTATGATCGTTATCTTAATTTTGTTGATTTCATTTAATCAACCCCGATTTGTAGACTCCTTTCC

Coding sequence (CDS)

ATGGCATCATCTACCTCAGGATCATCAAAGAGAGCCAGAGGAACTCATAATGGTAACACTCAACCAGTTTCTTGCCTTGTAGATGGCTGCAATTCAGATCTAAGCATCTGTAGAGATTACCATAGGCGCCATAAAGTTTGTGAGTTGCATTCAAAAACTCCTCAAGTCACAATTGGTGGTCTCAAGCAGAGATTTTGCCAGCAGTGTAGTAGAAGGTTTGGCTCTGGAATTAGATGTGCTTTTGAGTCTTTTCATGAGAAAAAAAAATTTACCCAATTTTGGTATCTTAAATTTGAAGGCATTGTTGAATTCCCATCTGCTCTGTTTTGCAATGCTCTGTTTCATTCACTTGAGGAATTTGACGAAGGAAAGAGAAGCTGCCGCAAACGACTTGATGGCCATAACCGGCGCCGGAGAAAGCCTCAAACTGACCTCTTGCCTCGATCTGCCGCTCCTTTCTCCTACCATCAAGGTCCCCAGTTGTTGCCATTTACAAGCTCACAAGTTTTCCCATCGACCGCCGTGAGCAGCCACGGGTGGTCGTCTGGCGTCAGCGAAGGTGCAATAGATCCCGCCGCCCACCACAACCACAACCCACAACTAAACTTCCTCGAAAAACAGAGCCTATTTGCAAAAGCATCCGACCAAAGCAACAACAACAACTACAAACCCTCGCAGCCATTAGGGTTCTTGCACGGCGGCGGCGGCGGCAGCCGGAACAAGATGATTTACGACAGGTTCAGAATTGGGGTTAATGAATCAGATTGTGCTCTCTCTCTTCTGTCATCACCACCGACACAGATTCAGAGTGATCATCAACCACAGCAACACCGTAACGCCGCCATTTCTCTGCTCCATCCATTAACCTATCAAAACACTTTTGAGAATTCTGATTCTTCTTCCATTCAGATTCCAAATGACACTCATCATCATCATCATCATCATCATCCTCATGGGGCTCTTAATTTCCCCGGAATCTTTGGAATTTCCTCCGACAATCCTGGAAATCAATCCCCTTCTACTCTTCCTTTTCACTGGGAGTAA

Protein sequence

MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQVFPSTAVSSHGWSSGVSEGAIDPAAHHNHNPQLNFLEKQSLFAKASDQSNNNNYKPSQPLGFLHGGGGGSRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQHRNAAISLLHPLTYQNTFENSDSSSIQIPNDTHHHHHHHHPHGALNFPGIFGISSDNPGNQSPSTLPFHWE

Homology

[Close]

BLAST of CcUC03G046180 vs. NCBI nr
Match: XP_011652208.1 (squamosa promoter-binding-like protein 13A [Cucumis sativus] >XP_031736289.1 squamosa promoter-binding-like protein 13A [Cucumis sativus] >KGN64421.1 hypothetical protein Csa_014174 [Cucumis sativus])

HSP 1 Score: 520.0 bits (1338), Expect = 1.6e-143
Identity = 270/356 (75.84%), Postives = 281/356 (78.93%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTI G
Sbjct: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 61  LKQRFCQQCSR------------------------------------------FHSLEEF 120

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA-PFSYHQGPQLLPFTSSQVFPSTAVSSHG 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA PFSYHQGPQLLPFTSSQVFPST VSSHG
Sbjct: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAGPFSYHQGPQLLPFTSSQVFPSTTVSSHG 180

Query: 181 WSSGVSEGAIDPAAHHNHNPQLNFLEK-QSLFAKASDQSNN-NNYKPSQPLGFLHGGGGG 240
           WSSG S+ A D   HHN NPQLNF+EK QSLF + SDQ+N+ NNYK S PLG +HGGGG 
Sbjct: 181 WSSGGSDNATDSGVHHNRNPQLNFVEKQQSLFVETSDQTNSINNYKASPPLGLMHGGGGS 240

Query: 241 SRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQHRNAAISLLHPLTYQNTFENS 300
            RNKMIYDRFRIG+NESDCALSLLSSP TQIQSDHQPQQ RNA+ISLLHPLT+QN F+NS
Sbjct: 241 ERNKMIYDRFRIGINESDCALSLLSSPQTQIQSDHQPQQQRNASISLLHPLTHQNAFDNS 300

Query: 301 ---DSSSIQIPNDTHHHHHHH---HPHGALNFPGIFGISSDNPGNQSPSTLPFHWE 348
               SSS+QI NDTHHHHHHH   HPHG LNF GIFGISSDNPGNQSPSTLPFHWE
Sbjct: 301 SDTSSSSVQISNDTHHHHHHHPHPHPHGVLNFSGIFGISSDNPGNQSPSTLPFHWE 314

[Close]

BLAST of CcUC03G046180 vs. NCBI nr
Match: XP_008439882.1 (PREDICTED: squamosa promoter-binding-like protein 13A [Cucumis melo] >KAA0055341.1 squamosa promoter-binding-like protein 13A [Cucumis melo var. makuwa] >TYJ99267.1 squamosa promoter-binding-like protein 13A [Cucumis melo var. makuwa])

HSP 1 Score: 513.1 bits (1320), Expect = 1.9e-141
Identity = 275/364 (75.55%), Postives = 283/364 (77.75%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTI G
Sbjct: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 61  LKQRFCQQCSR------------------------------------------FHSLEEF 120

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA-PFSYHQGPQLLPFTSSQVFPSTAVSSHG 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA PFSYHQGP LLPFTSSQVFPST VSSHG
Sbjct: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAGPFSYHQGPPLLPFTSSQVFPSTTVSSHG 180

Query: 181 WSSGVSEGAIDPAAHHNHNPQLNFLEK-QSLFAKASDQSNN-NNYKPSQPLGFLHGGGGG 240
           WSSG S+ A DP  HHN NPQLNFLEK QS+F + SDQ+NN NNYK S PLG LHGGGGG
Sbjct: 181 WSSGGSDNATDPGVHHNRNPQLNFLEKQQSIFVETSDQTNNINNYKASPPLGLLHGGGGG 240

Query: 241 S-RNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQP----QQHRNAAISLLHPL--TY 300
           S RNKMIYDRFRIG+NESDCALSLLSSP TQIQSDHQP    QQ RNAAISLLHPL  T+
Sbjct: 241 SERNKMIYDRFRIGINESDCALSLLSSPQTQIQSDHQPQQQQQQQRNAAISLLHPLSTTH 300

Query: 301 QNTFENS---DSSSIQIPNDT----HHHHHHHHPHGALNFPGIFGISSDNPGNQSPSTLP 348
           QN F+NS    SSS+QI NDT    HHHHHHHHPHG LNF GIFGISSDNPGNQSPSTLP
Sbjct: 301 QNAFDNSSDTSSSSVQISNDTHHHHHHHHHHHHPHGVLNFSGIFGISSDNPGNQSPSTLP 322

[Close]

BLAST of CcUC03G046180 vs. NCBI nr
Match: XP_038893774.1 (squamosa promoter-binding-like protein 13A [Benincasa hispida] >XP_038893775.1 squamosa promoter-binding-like protein 13A [Benincasa hispida] >XP_038893776.1 squamosa promoter-binding-like protein 13A [Benincasa hispida])

HSP 1 Score: 510.8 bits (1314), Expect = 9.5e-141
Identity = 269/367 (73.30%), Postives = 277/367 (75.48%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTI G
Sbjct: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTISG 60

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 61  LKQRFCQQCSR------------------------------------------FHSLEEF 120

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQVFPSTAVSSHGW 180
           DEGKRSCRKRLDGHNRRRRKPQTD LPRSA  FSYHQGPQLLPFTSSQVFPST VSSHGW
Sbjct: 121 DEGKRSCRKRLDGHNRRRRKPQTDPLPRSAGSFSYHQGPQLLPFTSSQVFPSTTVSSHGW 180

Query: 181 SSGVSEGAIDPAAHHNHNPQLNFLEKQSLFAKASDQSNNNNYKPSQPLGFLHGG------ 240
           SSGVS+GA DPA HHN NPQLNFLEKQSLF +ASDQS+NNNYK SQPLGFLHGG      
Sbjct: 181 SSGVSDGATDPAVHHNRNPQLNFLEKQSLFVEASDQSSNNNYKASQPLGFLHGGPTTCQP 240

Query: 241 -------------GGGSRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQHRNAA 300
                        GG  RNKMIYDRF+IGV+ESDCALSLLSSP TQIQSDHQ QQ RN A
Sbjct: 241 LLRTINTLPDNGDGGSERNKMIYDRFKIGVSESDCALSLLSSPQTQIQSDHQLQQQRNVA 300

Query: 301 ISLLHPLTYQNTFENSDSSSIQIPNDTHHHH-HHHHPHGALNFPGIFGISSDNPGNQSPS 348
           IS+LHPLT+ NTF+ SDSSS QIPND HHHH     PH ALNF GIFGISSDN GNQSPS
Sbjct: 301 ISMLHPLTHPNTFDTSDSSSGQIPNDIHHHHPPPPPPHAALNFSGIFGISSDNSGNQSPS 325

[Close]

BLAST of CcUC03G046180 vs. NCBI nr
Match: XP_023542691.1 (squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399.1 bits (1024), Expect = 4.0e-107
Identity = 227/388 (58.51%), Postives = 249/388 (64.18%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARG +N  +QPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTIGG
Sbjct: 70  MASSTSGSSKRARGANNAGSQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGG 129

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 130 LKQRFCQQCSR------------------------------------------FHSLEEF 189

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQVFPSTAVSSHGW 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSA PFSYHQG  LLP+TS+QV+PST VSSHGW
Sbjct: 190 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGPFSYHQGSHLLPYTSAQVYPSTTVSSHGW 249

Query: 181 SSGVSEGAIDPAAHHNHNPQLNFLEKQSLFAKASDQSNNNNYKPSQPLGFLH-------- 240
           SS     A+      + + QLNFLEKQSLF + SD S  NNYK +Q L F+H        
Sbjct: 250 SSTGETAAL------HRDQQLNFLEKQSLFVEQSDHS--NNYKTAQTLAFMHGGPTTTCQ 309

Query: 241 --------------GGGGGSRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQ--- 300
                         GGGGG RNKMIYDRFRIGV+ESDCALSLLSSP  Q Q+DHQPQ   
Sbjct: 310 HLLRSMNTLSENGGGGGGGERNKMIYDRFRIGVSESDCALSLLSSP--QAQTDHQPQQQP 369

Query: 301 ----QHRNAAISLLHPLTYQNTFENSDSSSIQIPNDTHHHHHHHHPH------------G 348
               Q   +  S    L+     + S + S+  P + HHHHHHHH H            G
Sbjct: 370 QPQPQQAESGSSGHLDLSRIEQHQRSAAVSLLQPLNNHHHHHHHHSHNSYENSDSDNHGG 405

[Close]

BLAST of CcUC03G046180 vs. NCBI nr
Match: KAG6573138.1 (Squamosa promoter-binding-like protein 16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 390.6 bits (1002), Expect = 1.4e-104
Identity = 221/380 (58.16%), Postives = 247/380 (65.00%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARG +N  +QPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTIGG
Sbjct: 1   MASSTSGSSKRARGANNAGSQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGG 60

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 61  LKQRFCQQCSR------------------------------------------FHSLEEF 120

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQVFPSTAVSSHGW 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSA PFSYHQG  LLP+TS+QV+PST VSSHGW
Sbjct: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGPFSYHQGSHLLPYTSAQVYPSTTVSSHGW 180

Query: 181 SSGVSEGAIDPAAHHNHNPQLNFLEKQSLFAKASDQSNNNNYKPSQPLGFLH-------- 240
           SS     A+      + + QLNFLEKQSLF + SD S  NNYK +Q L F+H        
Sbjct: 181 SSTGETAAL------HRDQQLNFLEKQSLFVEQSDHS--NNYKTAQTLAFMHGGPTTTCQ 240

Query: 241 -------------GGGGGSRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQH-- 300
                        GGGGG RNKMIYDRFRIGV+ESDCALSLLSSP  Q Q+DHQPQQ   
Sbjct: 241 PLLRSMNTLSENGGGGGGERNKMIYDRFRIGVSESDCALSLLSSP--QAQTDHQPQQQPQ 300

Query: 301 -RNAAISLLHPLTYQNTFENSDSSSIQIPNDTHHHHHHHHPH---------GALNFPGIF 348
            + A       L      ++  S+++ +    +HHHH H+ +         GALNFPGIF
Sbjct: 301 PQQAESGSSGHLDLGRIEQHQRSAAVSLLQPLNHHHHSHNSYENSDSDNHGGALNFPGIF 328

[Close]

BLAST of CcUC03G046180 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.6e-42
Identity = 130/351 (37.04%), Postives = 167/351 (47.58%), Query Frame = 0


Query: 4   STSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQ 63
           S S SSKR RG   G  Q   CLVDGC+SD S CR+YH+RHKVC++HSKTP VTI G KQ
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEG 123
           RFCQQCSR                                          FH+LEEFDEG
Sbjct: 140 RFCQQCSR------------------------------------------FHALEEFDEG 199

Query: 124 KRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFT-SSQVFPSTAVSSHGWSS 183
           KRSCRKRLDGHNRRRRKPQ + + R A  F+  QG +LL F+  S VFP+T+V +  W +
Sbjct: 200 KRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGN 259

Query: 184 GVSEGAIDPAAHHNHNPQLNFLEKQSLFAKAS-----DQSNNNNYKPSQPLGFLHGGGGG 243
            +   A+  AA+ +   Q       S  AK         S N+    ++   FL      
Sbjct: 260 SLVSVAV--AANGSSYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQ-EEES 319

Query: 244 SRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQHRNAAISLLHPLTY-QNTFEN 303
           SR   + +R    +++SDCALSLLSS  + +   H  Q   + +   +  + Y    FEN
Sbjct: 320 SRTASLCERMTSCIHDSDCALSLLSSSSSSV--PHLLQPPLSLSQEAVETVFYGSGLFEN 359

Query: 304 SDSSSIQIPNDTHHHHHHHHPHGALNFPGIFGISSDNPGNQSPSTLPFHWE 348
           + + S                           + S N   + P T PFHWE
Sbjct: 380 ASAVSDG------------------------SVISGNEAVRLPQTFPFHWE 359

[Close]

BLAST of CcUC03G046180 vs. ExPASy Swiss-Prot
Match: P0DI11 (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.6e-42
Identity = 130/351 (37.04%), Postives = 167/351 (47.58%), Query Frame = 0


Query: 4   STSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQ 63
           S S SSKR RG   G  Q   CLVDGC+SD S CR+YH+RHKVC++HSKTP VTI G KQ
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEG 123
           RFCQQCSR                                          FH+LEEFDEG
Sbjct: 140 RFCQQCSR------------------------------------------FHALEEFDEG 199

Query: 124 KRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFT-SSQVFPSTAVSSHGWSS 183
           KRSCRKRLDGHNRRRRKPQ + + R A  F+  QG +LL F+  S VFP+T+V +  W +
Sbjct: 200 KRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGN 259

Query: 184 GVSEGAIDPAAHHNHNPQLNFLEKQSLFAKAS-----DQSNNNNYKPSQPLGFLHGGGGG 243
            +   A+  AA+ +   Q       S  AK         S N+    ++   FL      
Sbjct: 260 SLVSVAV--AANGSSYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQ-EEES 319

Query: 244 SRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQHRNAAISLLHPLTY-QNTFEN 303
           SR   + +R    +++SDCALSLLSS  + +   H  Q   + +   +  + Y    FEN
Sbjct: 320 SRTASLCERMTSCIHDSDCALSLLSSSSSSV--PHLLQPPLSLSQEAVETVFYGSGLFEN 359

Query: 304 SDSSSIQIPNDTHHHHHHHHPHGALNFPGIFGISSDNPGNQSPSTLPFHWE 348
           + + S                           + S N   + P T PFHWE
Sbjct: 380 ASAVSDG------------------------SVISGNEAVRLPQTFPFHWE 359

[Close]

BLAST of CcUC03G046180 vs. ExPASy Swiss-Prot
Match: Q6YZE8 (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL16 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.4e-32
Identity = 127/417 (30.46%), Postives = 159/417 (38.13%), Query Frame = 0


Query: 2   ASSTSGSSKRARG-THNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 61
           A+++S  +KR RG    G  Q  SC VDGC  DLS CRDYHRRHKVCE HSKTP V + G
Sbjct: 94  AAASSAPAKRPRGAAAAGQQQCPSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSG 153

Query: 62  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 121
            + RFCQQCSR                                          FH L+EF
Sbjct: 154 REMRFCQQCSR------------------------------------------FHLLQEF 213

Query: 122 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQVFPSTAVSSHGW 181
           DE KRSCRKRLDGHNRRRRKPQ D +  SA+  +  QG +  PF       +T      W
Sbjct: 214 DEAKRSCRKRLDGHNRRRRKPQPDPM-NSASYLASQQGARFSPF-------ATPRPEASW 273

Query: 182 SSGVSEGAIDPAAHHNHNPQLNFLEKQSLFAKASDQSNNNNYKPSQPLGF---------- 241
            +G+ +    P   H+  P      +Q      SD      +     + F          
Sbjct: 274 -TGMIKTEESPYYTHHQIPLGISSRQQHFVGSTSDGGRRFPFLQEGEISFGTGAGAGGVP 333

Query: 242 -------------------------LHGGGGGSRNKMIYDRFRIGVNESDCALSLLSSPP 301
                                     HGGGG    KM  D     V +SDCALSLLS+P 
Sbjct: 334 MDQAAAAAAASVCQPLLKTVAPPPPPHGGGGSGGGKMFSDGGLTQVLDSDCALSLLSAPA 393

Query: 302 TQIQSD-------HQPQQHRNAAISLLHPLTYQNTFENSDSSSIQIPNDTHHHHHHHHPH 348
                D        QP +H    I +  PL     F     SS       HH        
Sbjct: 394 NSTAIDVGGGRVVVQPTEH----IPMAQPLISGLQFGGGGGSSAWFAARPHHQAATGAAA 453

[Close]

BLAST of CcUC03G046180 vs. ExPASy Swiss-Prot
Match: Q0J0K1 (Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL18 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.7e-31
Identity = 106/322 (32.92%), Postives = 136/322 (42.24%), Query Frame = 0


Query: 4   STSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQ 63
           STS   +   G   G  Q  SC VDGC +DLS  RDYHRRHKVCE HSKTP V + G + 
Sbjct: 94  STSTLKRPRGGGGGGGGQCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREM 153

Query: 64  RFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEG 123
           RFCQQCSR                                          FH L EFDE 
Sbjct: 154 RFCQQCSR------------------------------------------FHLLGEFDEA 213

Query: 124 KRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQVFPSTAVSSHGWSSG 183
           KRSCRKRLDGHNRRRRKPQ D +  S +  +  QG +   FT  +  PS       W  G
Sbjct: 214 KRSCRKRLDGHNRRRRKPQADSM-SSGSFMTSQQGTRFASFTPPRPEPS-------W-PG 273

Query: 184 VSEGAIDPAAHHNHNPQLNFLEKQSLFAKASDQSNNNNYKPSQ--PLGFLH-------GG 243
           + +    P   H+H+P      +Q  F  +   +    + P +     FLH       GG
Sbjct: 274 IIKSEETPYYSHHHHPHPVMTSRQPHFVGSPSSATTAAFSPKEGRRFPFLHEGDQISFGG 333

Query: 244 GGGSRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQHRNAAISLLHPLTYQNTF 303
           GGG+            +  S C  ++++ PP +  S ++                    F
Sbjct: 334 GGGAAAAAT-------LEISVCQTTVVAPPPPESSSSNK-------------------MF 338

Query: 304 ENSDSSSIQIPNDTHHHHHHHH 317
            +   ++      T HHHHHHH
Sbjct: 394 SSDGLTTATTTTTTAHHHHHHH 338

[Close]

BLAST of CcUC03G046180 vs. ExPASy Swiss-Prot
Match: Q49I55 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.6e-29
Identity = 104/289 (35.99%), Postives = 128/289 (44.29%), Query Frame = 0


Query: 4   STSGSSKRARGTHNGNTQP---VSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 63
           + +G++KR R    G  Q     SC VDGC +DL  CRDYHRRHKVCE HSKTP V + G
Sbjct: 80  AAAGAAKRPRPAGPGGQQQQQCPSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPVVVVAG 139

Query: 64  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 123
            + RFCQQCSR                                          FH L EF
Sbjct: 140 REMRFCQQCSR------------------------------------------FHLLAEF 199

Query: 124 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQV----------- 183
           D  KRSCRKRLDGHNRRRRKPQ D +  SA+  +  QG +  PF   ++           
Sbjct: 200 DADKRSCRKRLDGHNRRRRKPQPDTM-ASASFIASQQGTRFSPFAHPRLEASWPPGVMKT 259

Query: 184 ----------FPSTAVSSHGWSSGVSEGAIDPAAHHNHNPQLNFLEKQSL-FAKASDQSN 243
                      P  + SS      V+ GA  P A+     +  FL++  + FA       
Sbjct: 260 EESPYHITHQIPLGSSSSSRQQHFVALGAATP-AYAKEGRRFPFLQEGEISFATGVVLEP 319

Query: 244 NNNYKPSQPL---GFLHGGGGGSRNKMIYDRFRIGVNESDCALSLLSSP 265
                  QPL   G      G   +KM  D+    V +SDCALSLLS+P
Sbjct: 320 PAAAPACQPLLRTGAPSESSGAGGSKMFSDQGLARVLDSDCALSLLSAP 324

[Close]

BLAST of CcUC03G046180 vs. ExPASy TrEMBL
Match: A0A0A0LWQ4 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G051590 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 7.6e-144
Identity = 270/356 (75.84%), Postives = 281/356 (78.93%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTI G
Sbjct: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 61  LKQRFCQQCSR------------------------------------------FHSLEEF 120

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA-PFSYHQGPQLLPFTSSQVFPSTAVSSHG 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA PFSYHQGPQLLPFTSSQVFPST VSSHG
Sbjct: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAGPFSYHQGPQLLPFTSSQVFPSTTVSSHG 180

Query: 181 WSSGVSEGAIDPAAHHNHNPQLNFLEK-QSLFAKASDQSNN-NNYKPSQPLGFLHGGGGG 240
           WSSG S+ A D   HHN NPQLNF+EK QSLF + SDQ+N+ NNYK S PLG +HGGGG 
Sbjct: 181 WSSGGSDNATDSGVHHNRNPQLNFVEKQQSLFVETSDQTNSINNYKASPPLGLMHGGGGS 240

Query: 241 SRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQHRNAAISLLHPLTYQNTFENS 300
            RNKMIYDRFRIG+NESDCALSLLSSP TQIQSDHQPQQ RNA+ISLLHPLT+QN F+NS
Sbjct: 241 ERNKMIYDRFRIGINESDCALSLLSSPQTQIQSDHQPQQQRNASISLLHPLTHQNAFDNS 300

Query: 301 ---DSSSIQIPNDTHHHHHHH---HPHGALNFPGIFGISSDNPGNQSPSTLPFHWE 348
               SSS+QI NDTHHHHHHH   HPHG LNF GIFGISSDNPGNQSPSTLPFHWE
Sbjct: 301 SDTSSSSVQISNDTHHHHHHHPHPHPHGVLNFSGIFGISSDNPGNQSPSTLPFHWE 314

[Close]

BLAST of CcUC03G046180 vs. ExPASy TrEMBL
Match: A0A5A7UP61 (Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004790 PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 9.3e-142
Identity = 275/364 (75.55%), Postives = 283/364 (77.75%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTI G
Sbjct: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 61  LKQRFCQQCSR------------------------------------------FHSLEEF 120

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA-PFSYHQGPQLLPFTSSQVFPSTAVSSHG 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA PFSYHQGP LLPFTSSQVFPST VSSHG
Sbjct: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAGPFSYHQGPPLLPFTSSQVFPSTTVSSHG 180

Query: 181 WSSGVSEGAIDPAAHHNHNPQLNFLEK-QSLFAKASDQSNN-NNYKPSQPLGFLHGGGGG 240
           WSSG S+ A DP  HHN NPQLNFLEK QS+F + SDQ+NN NNYK S PLG LHGGGGG
Sbjct: 181 WSSGGSDNATDPGVHHNRNPQLNFLEKQQSIFVETSDQTNNINNYKASPPLGLLHGGGGG 240

Query: 241 S-RNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQP----QQHRNAAISLLHPL--TY 300
           S RNKMIYDRFRIG+NESDCALSLLSSP TQIQSDHQP    QQ RNAAISLLHPL  T+
Sbjct: 241 SERNKMIYDRFRIGINESDCALSLLSSPQTQIQSDHQPQQQQQQQRNAAISLLHPLSTTH 300

Query: 301 QNTFENS---DSSSIQIPNDT----HHHHHHHHPHGALNFPGIFGISSDNPGNQSPSTLP 348
           QN F+NS    SSS+QI NDT    HHHHHHHHPHG LNF GIFGISSDNPGNQSPSTLP
Sbjct: 301 QNAFDNSSDTSSSSVQISNDTHHHHHHHHHHHHPHGVLNFSGIFGISSDNPGNQSPSTLP 322

[Close]

BLAST of CcUC03G046180 vs. ExPASy TrEMBL
Match: A0A1S3AZD9 (squamosa promoter-binding-like protein 13A OS=Cucumis melo OX=3656 GN=LOC103484534 PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 9.3e-142
Identity = 275/364 (75.55%), Postives = 283/364 (77.75%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTI G
Sbjct: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 61  LKQRFCQQCSR------------------------------------------FHSLEEF 120

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA-PFSYHQGPQLLPFTSSQVFPSTAVSSHG 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA PFSYHQGP LLPFTSSQVFPST VSSHG
Sbjct: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAGPFSYHQGPPLLPFTSSQVFPSTTVSSHG 180

Query: 181 WSSGVSEGAIDPAAHHNHNPQLNFLEK-QSLFAKASDQSNN-NNYKPSQPLGFLHGGGGG 240
           WSSG S+ A DP  HHN NPQLNFLEK QS+F + SDQ+NN NNYK S PLG LHGGGGG
Sbjct: 181 WSSGGSDNATDPGVHHNRNPQLNFLEKQQSIFVETSDQTNNINNYKASPPLGLLHGGGGG 240

Query: 241 S-RNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQP----QQHRNAAISLLHPL--TY 300
           S RNKMIYDRFRIG+NESDCALSLLSSP TQIQSDHQP    QQ RNAAISLLHPL  T+
Sbjct: 241 SERNKMIYDRFRIGINESDCALSLLSSPQTQIQSDHQPQQQQQQQRNAAISLLHPLSTTH 300

Query: 301 QNTFENS---DSSSIQIPNDT----HHHHHHHHPHGALNFPGIFGISSDNPGNQSPSTLP 348
           QN F+NS    SSS+QI NDT    HHHHHHHHPHG LNF GIFGISSDNPGNQSPSTLP
Sbjct: 301 QNAFDNSSDTSSSSVQISNDTHHHHHHHHHHHHPHGVLNFSGIFGISSDNPGNQSPSTLP 322

[Close]

BLAST of CcUC03G046180 vs. ExPASy TrEMBL
Match: A0A6J1GVH8 (squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC111457246 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 1.2e-104
Identity = 221/382 (57.85%), Postives = 247/382 (64.66%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARG +N  +QPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTIGG
Sbjct: 64  MASSTSGSSKRARGANNAGSQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGG 123

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 124 LKQRFCQQCSR------------------------------------------FHSLEEF 183

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQVFPSTAVSSHGW 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSA PFSYHQG  LL +TS+QV+PST VSSHGW
Sbjct: 184 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGPFSYHQGSHLLAYTSAQVYPSTTVSSHGW 243

Query: 181 SSGVSEGAIDPAAHHNHNPQLNFLEKQSLFAKASDQSNNNNYKPSQPLGFLH-------- 240
           SS     A+      + + QLNFLEKQSLF + SD S  NNYK +Q L F+H        
Sbjct: 244 SSTGETAAL------HRDQQLNFLEKQSLFVEQSDHS--NNYKTAQTLAFMHGGPTTTCQ 303

Query: 241 ---------------GGGGGSRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQH 300
                          GGGGG RNKMIYDRFRIGV+ESDCALSLLSSP  Q Q+DHQPQQ 
Sbjct: 304 PLLRSMNTLSENGGGGGGGGERNKMIYDRFRIGVSESDCALSLLSSP--QAQTDHQPQQQ 363

Query: 301 ---RNAAISLLHPLTYQNTFENSDSSSIQIPNDTHHHHHHHHPH---------GALNFPG 348
              + A       L      ++  S+++ +    +HHHH H+ +         GALNFPG
Sbjct: 364 PQPQQAESGSSGHLDLGRIEQHQRSAAVSLLQPLNHHHHSHNSYENSDSDNHGGALNFPG 393

[Close]

BLAST of CcUC03G046180 vs. ExPASy TrEMBL
Match: A0A6J1JZ22 (squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111490133 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 2.6e-104
Identity = 228/392 (58.16%), Postives = 249/392 (63.52%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARG +N  +QPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTIGG
Sbjct: 70  MASSTSGSSKRARGANNAGSQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGG 129

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 130 LKQRFCQQCSR------------------------------------------FHSLEEF 189

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQVFPSTAVSSHGW 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSA PFSYHQG  LLP+T +QV+PST VSSHGW
Sbjct: 190 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGPFSYHQGSHLLPYTRAQVYPSTTVSSHGW 249

Query: 181 SSGVSEGAIDPAAHHNHNPQLNFLEKQSLFAKASDQSNNNNYKPSQPLGFLH-------- 240
           SS          A  + + QLNFLEKQSLF + S  S  NNYK +Q L F+H        
Sbjct: 250 SS------TGETAGLHRDQQLNFLEKQSLFVEQSHHS--NNYKTAQTLAFMHGGPTTTCQ 309

Query: 241 ---------------GGGGGSRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQ-- 300
                          GGGGG RNKMIYDRFRIGV+ESDCALSLLSSP  Q Q+DHQPQ  
Sbjct: 310 PLLRSMNTLSENGGGGGGGGERNKMIYDRFRIGVSESDCALSLLSSP--QAQTDHQPQPQ 369

Query: 301 ----------------QH-RNAAISLLHPLTY---QNTFENSDSSSIQIPNDTHHHHHHH 348
                           QH R+AA+SLL PL++    N++ENSDS       D H      
Sbjct: 370 QAESGSSGHLDLSRIEQHQRSAAVSLLQPLSHHHSHNSYENSDS-------DNH------ 394

[Close]

BLAST of CcUC03G046180 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-43
Identity = 130/351 (37.04%), Postives = 167/351 (47.58%), Query Frame = 0


Query: 4   STSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQ 63
           S S SSKR RG   G  Q   CLVDGC+SD S CR+YH+RHKVC++HSKTP VTI G KQ
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEG 123
           RFCQQCSR                                          FH+LEEFDEG
Sbjct: 140 RFCQQCSR------------------------------------------FHALEEFDEG 199

Query: 124 KRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFT-SSQVFPSTAVSSHGWSS 183
           KRSCRKRLDGHNRRRRKPQ + + R A  F+  QG +LL F+  S VFP+T+V +  W +
Sbjct: 200 KRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGN 259

Query: 184 GVSEGAIDPAAHHNHNPQLNFLEKQSLFAKAS-----DQSNNNNYKPSQPLGFLHGGGGG 243
            +   A+  AA+ +   Q       S  AK         S N+    ++   FL      
Sbjct: 260 SLVSVAV--AANGSSYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQ-EEES 319

Query: 244 SRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQHRNAAISLLHPLTY-QNTFEN 303
           SR   + +R    +++SDCALSLLSS  + +   H  Q   + +   +  + Y    FEN
Sbjct: 320 SRTASLCERMTSCIHDSDCALSLLSSSSSSV--PHLLQPPLSLSQEAVETVFYGSGLFEN 359

Query: 304 SDSSSIQIPNDTHHHHHHHHPHGALNFPGIFGISSDNPGNQSPSTLPFHWE 348
           + + S                           + S N   + P T PFHWE
Sbjct: 380 ASAVSDG------------------------SVISGNEAVRLPQTFPFHWE 359

[Close]

BLAST of CcUC03G046180 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-43
Identity = 130/351 (37.04%), Postives = 167/351 (47.58%), Query Frame = 0


Query: 4   STSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQ 63
           S S SSKR RG   G  Q   CLVDGC+SD S CR+YH+RHKVC++HSKTP VTI G KQ
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEG 123
           RFCQQCSR                                          FH+LEEFDEG
Sbjct: 140 RFCQQCSR------------------------------------------FHALEEFDEG 199

Query: 124 KRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFT-SSQVFPSTAVSSHGWSS 183
           KRSCRKRLDGHNRRRRKPQ + + R A  F+  QG +LL F+  S VFP+T+V +  W +
Sbjct: 200 KRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGN 259

Query: 184 GVSEGAIDPAAHHNHNPQLNFLEKQSLFAKAS-----DQSNNNNYKPSQPLGFLHGGGGG 243
            +   A+  AA+ +   Q       S  AK         S N+    ++   FL      
Sbjct: 260 SLVSVAV--AANGSSYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQ-EEES 319

Query: 244 SRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQHRNAAISLLHPLTY-QNTFEN 303
           SR   + +R    +++SDCALSLLSS  + +   H  Q   + +   +  + Y    FEN
Sbjct: 320 SRTASLCERMTSCIHDSDCALSLLSSSSSSV--PHLLQPPLSLSQEAVETVFYGSGLFEN 359

Query: 304 SDSSSIQIPNDTHHHHHHHHPHGALNFPGIFGISSDNPGNQSPSTLPFHWE 348
           + + S                           + S N   + P T PFHWE
Sbjct: 380 ASAVSDG------------------------SVISGNEAVRLPQTFPFHWE 359

[Close]

BLAST of CcUC03G046180 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-43
Identity = 130/351 (37.04%), Postives = 167/351 (47.58%), Query Frame = 0


Query: 4   STSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQ 63
           S S SSKR RG   G  Q   CLVDGC+SD S CR+YH+RHKVC++HSKTP VTI G KQ
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEG 123
           RFCQQCSR                                          FH+LEEFDEG
Sbjct: 140 RFCQQCSR------------------------------------------FHALEEFDEG 199

Query: 124 KRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFT-SSQVFPSTAVSSHGWSS 183
           KRSCRKRLDGHNRRRRKPQ + + R A  F+  QG +LL F+  S VFP+T+V +  W +
Sbjct: 200 KRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGN 259

Query: 184 GVSEGAIDPAAHHNHNPQLNFLEKQSLFAKAS-----DQSNNNNYKPSQPLGFLHGGGGG 243
            +   A+  AA+ +   Q       S  AK         S N+    ++   FL      
Sbjct: 260 SLVSVAV--AANGSSYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQ-EEES 319

Query: 244 SRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQHRNAAISLLHPLTY-QNTFEN 303
           SR   + +R    +++SDCALSLLSS  + +   H  Q   + +   +  + Y    FEN
Sbjct: 320 SRTASLCERMTSCIHDSDCALSLLSSSSSSV--PHLLQPPLSLSQEAVETVFYGSGLFEN 359

Query: 304 SDSSSIQIPNDTHHHHHHHHPHGALNFPGIFGISSDNPGNQSPSTLPFHWE 348
           + + S                           + S N   + P T PFHWE
Sbjct: 380 ASAVSDG------------------------SVISGNEAVRLPQTFPFHWE 359

[Close]

BLAST of CcUC03G046180 vs. TAIR 10
Match: AT1G76580.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-23
Identity = 61/139 (43.88%), Postives = 67/139 (48.20%), Query Frame = 0


Query: 8   SSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQRFCQ 67
           S     G   G   P  C VD C  DLSI +DYHRRHKVCE+HSK  +  +G   QRFCQ
Sbjct: 66  SGSPGSGGGGGGNYP-KCQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQRFCQ 125

Query: 68  QCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEGKRSC 127
           QCSR                                          FH L EFDEGKRSC
Sbjct: 126 QCSR------------------------------------------FHLLSEFDEGKRSC 161

Query: 128 RKRLDGHNRRRRKPQTDLL 147
           R+RLDGHNRRRRK Q D +
Sbjct: 186 RRRLDGHNRRRRKTQPDAI 161

[Close]

BLAST of CcUC03G046180 vs. TAIR 10
Match: AT3G60030.1 (squamosa promoter-binding protein-like 12 )

HSP 1 Score: 107.5 bits (267), Expect = 2.3e-23
Identity = 55/127 (43.31%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 20  TQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQRFCQQCSRRFGSGIRC 79
           ++ + C VD C +DLS  +DYHRRHKVCE+HSK     +GG+ QRFCQQCSR        
Sbjct: 122 SRAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSR-------- 181

Query: 80  AFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEGKRSCRKRLDGHNRRRR 139
                                             FH LEEFDEGKRSCR+RL GHN+RRR
Sbjct: 182 ----------------------------------FHVLEEFDEGKRSCRRRLAGHNKRRR 206

Query: 140 KPQTDLL 147
           K   D +
Sbjct: 242 KANPDTI 206

The following BLAST results are available for this feature:

BLAST of CcUC03G046180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652208.1	1.6e-143	75.84	squamosa promoter-binding-like protein 13A [Cucumis sativus] >XP_031736289.1 squ...	[more]
XP_008439882.1	1.9e-141	75.55	PREDICTED: squamosa promoter-binding-like protein 13A [Cucumis melo] >KAA0055341...	[more]
XP_038893774.1	9.5e-141	73.30	squamosa promoter-binding-like protein 13A [Benincasa hispida] >XP_038893775.1 s...	[more]
XP_023542691.1	4.0e-107	58.51	squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo]	[more]
KAG6573138.1	1.4e-104	58.16	Squamosa promoter-binding-like protein 16, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of CcUC03G046180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DI20	1.6e-42	37.04	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
P0DI11	1.6e-42	37.04	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
Q6YZE8	4.4e-32	30.46	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q0J0K1	3.7e-31	32.92	Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q49I55	1.6e-29	35.99	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1	[more]

BLAST of CcUC03G046180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWQ4	7.6e-144	75.84	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G051590 PE...	[more]
A0A5A7UP61	9.3e-142	75.55	Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3AZD9	9.3e-142	75.55	squamosa promoter-binding-like protein 13A OS=Cucumis melo OX=3656 GN=LOC1034845...	[more]
A0A6J1GVH8	1.2e-104	57.85	squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JZ22	2.6e-104	58.16	squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CcUC03G046180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50570.1	1.2e-43	37.04	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	1.2e-43	37.04	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	1.2e-43	37.04	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT1G76580.1	1.3e-23	43.88	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT3G60030.1	2.3e-23	43.31	squamosa promoter-binding protein-like 12	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 25..71 e-value: 1.1E-15 score: 57.6 coord: 113..140 e-value: 3.6E-8 score: 33.6
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 22..141 score: 22.811371
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 16..128 e-value: 9.2E-32 score: 111.0
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 106..146
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 23..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..347
None	No IPR available	PANTHER	PTHR31251:SF144	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A ISOFORM X1	coord: 1..73 coord: 113..347
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 1..73 coord: 113..347

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC03G046180.1	CcUC03G046180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding