Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCGCTCCAATTTCGCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAAGAACCAGTACCACTCCCCAGCCTCTCTTCCTTCCATGGCCGCTCTTCAAAATTCAAACCACAAACCCATTTTCCTTTCTCATCTTCTTTCATTTGCCCTTTCTGTAACCCTAAGCTCACCATTTCCTTCTCTCGCAATCCCTTCTCTTAACTCCCTCTCCTCTCCACTTTCTCCCACTACTCCATTTTCTCAATCCAAGAACTTACCAACTGGACTAGAAAACGGGTATGCTCTGAATCTTGTAATTTCAACTGTTTCTGTTCAATTTTGTTACTAGTTCATGGTTTCTGTGTGCCCCAAATTTGCATTGGTTTTCTGAATTGATTCATTGACATTGTAGCTAACTGCCTCTTTGGGGGTTTCCCTCAATGTTGTTCACCTTAATGTTGCAGGAAAATTATGCCCTGCCCATCAACCAATCCGTCTTGTGTTTCCACAAATCCTAAATCATCTTCTTTTGCATTCCCTTTAAACATTCCTGAGAATTTCAGTGGGAATCCAATTCAGGTTTTAGTTCTCTGAAAGCCGAGCATGATTTGCTTGTATATTCTTCTACAAAATTGGTTTCTCTTGGTGGTGTTGCTTTTTCATGTTCCTGCTCTACGTTTATTTGCAGAAGCTGCAGGAAGCAATCCTTGAAACACAGAGGAATCCAAAAATTCAGGTGGTGGAGGATACCCCTTATGGTAATTGAATTGAACTTATCAATTGAAGATTTAGACTTTGCATTTCTGATTTATATACATATTTTAATTAGACTGCTGAGGTGAGATGAGAATGGATTCTATTTACCATAGTGACTGTCGGCTTATTCTTTTGAATTCAATAGTGCTTTAACATAGATAAAGTAGTAAATCCTTGGTTGAGTTATAACTTCTAAGTTTGATTTTTGAATTCTCAAAAATAGGTAATAGTTCCTTAAAGTTTCATTGTTATATCTATAGGTTCTTTTAACTTTATAAAGGATCTATGTGGCCCAAAATTACATGGCTGCACATGGCTTGGTTATGACTCTATAAAATATTTAACCTACAAATTTTGGGGAAAATTGATACTCCTGTGGTTTGAATTTTTATATATTGATCAACCCTAAAGTAGTAGAATGACATCTTCATGCTCTAGTCATAGCCAACTAAATCTTTTTATATCTCTTAATATTTCAAATATCGTTAATCGAATTAACTTTGTATGTTTTTAGTGAAGTGACCATGTAAGAATTCGTCGTCCGATTTCATCTTCTTGTTCCTGTATTTTGCTTTGATGTTGAATTTACATCATTTATCTATCAAGATGCATATATTTTTTAGGGAAAATATTAAGTTATACCCATAAACTATAGAAGCTATTAGTTTAAATCTTGAACTAATACTTGTACTAATTTAAACCCTCAACTTTTGTAAATGTATCAATTTACACCTTCCATTATGTGTCGTTTGAAAAAAACCTTGTGTTGTAACTGTATCAACTACACTCCCAAACTTTTATAAATATATCAATTTAGACTCGTAGACAAAATTTCTTTTGAAAATAGTCCATGCATTTACTCTAATTGTCCATTATATAAAACAACGTTTGAAGAAATCTACACACGTTTGAAAAATAATGTACAAATGATTTTCAAATTAGGTAATCGTCAATCAGGGTCTTAAATTTATTGGTTTATGAAAATTTAAAAGTTGAGTTGACTTACATTAAAATTTCACTCAATATTGGTCAAATGAAACTTAGAGGAGGGTGTATATCGATACATTTATGAAAGTTCAAGGTTAAAATTGATACAATTATTAGTTTAGGGTTTTAATTGATACAACCTTCAAACTTTAGGGGTATAAATTGATATTTACCCTATATTTTATATTGAAAAAAAGTGTGTCCCAAATGTGTTTGTGGTCTAATATTTAAGAAATTGATGGGTCACCATGTTCGTGTTTGTGCTTCTTAGTTCGTGGATTTATGCGATTCAAAATCAAAAGTTTGAGGAATTATTTTGTTAAACACTTGTTAAGTTCCAGAACCAATGAAATAGAACTTAGAAAGTGTAGAGACCTATATCGATACTTTTTAGGCGTTAAAATCTTGAGCCTTTTACGTAAAAGAGAGTATGGTTATGGCTTATTGAACAAGATGCATTTATGATTATGACAGGTCAATATTTAGAAGCTGAGGTAGATGGGAACTTTGGGCGAGATGTGATTGAGTTTTTGGTGAAAGGAGATGTGGCTGCATATAGAATCATGGCTACAAAGGTGACTTATGTGTATCCCTTCACAACTGCTTTAGGGGACTCCAAAGGACAGGAAGAACGAATGAGGAAGATCATAGACCAGTTGGATTGGTATTCTCCAACCTTCGAATCCATGGATGACTAG
mRNA sequence
ATGAGTTCGCTCCAATTTCGCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAAGAACCAGTACCACTCCCCAGCCTCTCTTCCTTCCATGGCCGCTCTTCAAAATTCAAACCACAAACCCATTTTCCTTTCTCATCTTCTTTCATTTGCCCTTTCTGTAACCCTAAGCTCACCATTTCCTTCTCTCGCAATCCCTTCTCTTAACTCCCTCTCCTCTCCACTTTCTCCCACTACTCCATTTTCTCAATCCAAGAACTTACCAACTGGACTAGAAAACGGGAAAATTATGCCCTGCCCATCAACCAATCCGTCTTGTGTTTCCACAAATCCTAAATCATCTTCTTTTGCATTCCCTTTAAACATTCCTGAGAATTTCAGTGGGAATCCAATTCAGAAGCTGCAGGAAGCAATCCTTGAAACACAGAGGAATCCAAAAATTCAGGTGGTGGAGGATACCCCTTATGGTCAATATTTAGAAGCTGAGGTAGATGGGAACTTTGGGCGAGATGTGATTGAGTTTTTGGTGAAAGGAGATGTGGCTGCATATAGAATCATGGCTACAAAGGTGACTTATGTGTATCCCTTCACAACTGCTTTAGGGGACTCCAAAGGACAGGAAGAACGAATGAGGAAGATCATAGACCAGTTGGATTGGTATTCTCCAACCTTCGAATCCATGGATGACTAG
Coding sequence (CDS)
ATGAGTTCGCTCCAATTTCGCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAAGAACCAGTACCACTCCCCAGCCTCTCTTCCTTCCATGGCCGCTCTTCAAAATTCAAACCACAAACCCATTTTCCTTTCTCATCTTCTTTCATTTGCCCTTTCTGTAACCCTAAGCTCACCATTTCCTTCTCTCGCAATCCCTTCTCTTAACTCCCTCTCCTCTCCACTTTCTCCCACTACTCCATTTTCTCAATCCAAGAACTTACCAACTGGACTAGAAAACGGGAAAATTATGCCCTGCCCATCAACCAATCCGTCTTGTGTTTCCACAAATCCTAAATCATCTTCTTTTGCATTCCCTTTAAACATTCCTGAGAATTTCAGTGGGAATCCAATTCAGAAGCTGCAGGAAGCAATCCTTGAAACACAGAGGAATCCAAAAATTCAGGTGGTGGAGGATACCCCTTATGGTCAATATTTAGAAGCTGAGGTAGATGGGAACTTTGGGCGAGATGTGATTGAGTTTTTGGTGAAAGGAGATGTGGCTGCATATAGAATCATGGCTACAAAGGTGACTTATGTGTATCCCTTCACAACTGCTTTAGGGGACTCCAAAGGACAGGAAGAACGAATGAGGAAGATCATAGACCAGTTGGATTGGTATTCTCCAACCTTCGAATCCATGGATGACTAG
Protein sequence
MSSLQFRPPLVSPWKKKKKKNQYHSPASLPSMAALQNSNHKPIFLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD
Homology
BLAST of CcUC03G046120 vs. NCBI nr
Match:
XP_038893869.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic [Benincasa hispida])
HSP 1 Score: 448.0 bits (1151), Expect = 5.0e-122
Identity = 224/230 (97.39%), Postives = 228/230 (99.13%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKKKKKNQYHSPASLPSMAALQNSNHKPIFLSHLLSFALSVTLSSP 60
MSSLQFRPPLVSPWKKKKKKNQYHSP S PSMAALQNSNHKPIFLSH+LSFALS+TLSSP
Sbjct: 1 MSSLQFRPPLVSPWKKKKKKNQYHSPNSFPSMAALQNSNHKPIFLSHILSFALSITLSSP 60
Query: 61 FPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFAFP 120
FPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFAFP
Sbjct: 61 FPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFAFP 120
Query: 121 LNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGD 180
LNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGD
Sbjct: 121 LNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGD 180
Query: 181 VAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 231
VAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL+WYSPTF+SMDD
Sbjct: 181 VAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLNWYSPTFDSMDD 230
BLAST of CcUC03G046120 vs. NCBI nr
Match:
XP_004154123.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis sativus] >KGN64418.1 hypothetical protein Csa_013578 [Cucumis sativus])
HSP 1 Score: 431.4 bits (1108), Expect = 4.9e-117
Identity = 216/232 (93.10%), Postives = 224/232 (96.55%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKK--KKKNQYHSPASLPSMAALQNSNHKPIFLSHLLSFALSVTLS 60
MSSLQFRPPLVSPWKKK KNQYHSP S+PSM+ LQN+NHKPIFLSHLLSFALS+TLS
Sbjct: 1 MSSLQFRPPLVSPWKKKDNNNKNQYHSPVSVPSMSTLQNANHKPIFLSHLLSFALSITLS 60
Query: 61 SPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFA 120
SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPS NPSCVSTNPKSSSFA
Sbjct: 61 SPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSANPSCVSTNPKSSSFA 120
Query: 121 FPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVK 180
FPLNIP+NFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV+
Sbjct: 121 FPLNIPDNFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVR 180
Query: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 231
GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 232
BLAST of CcUC03G046120 vs. NCBI nr
Match:
XP_008439847.1 (PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis melo] >KAA0055338.1 thylakoid lumenal 17.9 kDa protein [Cucumis melo var. makuwa] >TYJ99264.1 thylakoid lumenal 17.9 kDa protein [Cucumis melo var. makuwa])
HSP 1 Score: 427.9 bits (1099), Expect = 5.4e-116
Identity = 216/233 (92.70%), Postives = 224/233 (96.14%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKK---KKKNQYHSPASLPSMAALQNSNHKPIFLSHLLSFALSVTL 60
MSSLQFRP LVSPWKKK KNQYHSP S+PSM+ALQN NHKPIFLSHLLSFALS+TL
Sbjct: 1 MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60
Query: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
+SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF
Sbjct: 61 TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
Query: 121 AFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
AFPLNIP+NFSGNPIQKLQEAILETQRNPKIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 231
KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 233
BLAST of CcUC03G046120 vs. NCBI nr
Match:
XP_022137359.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 [Momordica charantia])
HSP 1 Score: 392.5 bits (1007), Expect = 2.5e-105
Identity = 204/233 (87.55%), Postives = 212/233 (90.99%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKKKKKNQYHSP----ASLPSMAALQNSNHKPIFLSHLLSFALSVT 60
MSSL+F PPLVSPWKKKKKKN HSP SLPSMAALQNS+ KPI LSHLLSFALSVT
Sbjct: 1 MSSLRFPPPLVSPWKKKKKKNN-HSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVT 60
Query: 61 LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSS 120
LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNL GLENGKI PCPSTNP+CVSTNPKSSS
Sbjct: 61 LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSS 120
Query: 121 FAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
FAFPL+IPENF+ NPIQKLQE IL+TQRN KIQVVEDTPYGQYLEAEVDGNFGRDVIEFL
Sbjct: 121 FAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
Query: 181 VKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMD 230
VKGDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTF+SMD
Sbjct: 181 VKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
BLAST of CcUC03G046120 vs. NCBI nr
Match:
KAG7012320.1 (Thylakoid lumenal 17.9 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 390.6 bits (1002), Expect = 9.5e-105
Identity = 198/234 (84.62%), Postives = 213/234 (91.03%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKKKKKNQYHSP----ASLPSMAALQNSNHKPIFLSHLLSFALSVT 60
MSSL FRP LVSPWKKKK NQ+ S S PSMAAL N NHKPIF+SHLLSFALS+T
Sbjct: 1 MSSLHFRPALVSPWKKKKNNNQFLSAVLNRTSPPSMAALPNPNHKPIFISHLLSFALSIT 60
Query: 61 LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSS 120
L+SPFPSLAIPS NSLSSPLSPTTPFSQSK+LP GLENGKI PCPSTNPSCVSTNPKSSS
Sbjct: 61 LTSPFPSLAIPSFNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS 120
Query: 121 FAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
FAFPL+IPE+++GNPIQKLQE ILETQRN KIQ+VEDTPYGQY+EAEVDGNFGRDVIEFL
Sbjct: 121 FAFPLSIPESYTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYMEAEVDGNFGRDVIEFL 180
Query: 181 VKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 231
V+GDVAAYRIMA KVTYVYPFTTALGDSKGQEERM+KII++LDWYSPTFESM D
Sbjct: 181 VRGDVAAYRIMAAKVTYVYPFTTALGDSKGQEERMKKIIEELDWYSPTFESMVD 234
BLAST of CcUC03G046120 vs. ExPASy Swiss-Prot
Match:
Q9SW33 (Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g24930 PE=1 SV=1)
HSP 1 Score: 251.1 bits (640), Expect = 1.2e-65
Identity = 133/195 (68.21%), Postives = 161/195 (82.56%), Query Frame = 0
Query: 37 NSNHKPI-FLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENG 96
+S PI L L+SFAL+++L+S P+LAIPSL+S S PL TTPF+QSK + TGL NG
Sbjct: 34 SSTSPPISLLPKLISFALAISLTSFSPALAIPSLSS-SQPL--TTPFTQSKFVQTGLLNG 93
Query: 97 KIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTP 156
KI PCPSTNP CVSTNP SSSF+FPL IPE + +PI+KL+EAI+ TQ+NPK V+EDTP
Sbjct: 94 KIRPCPSTNPGCVSTNPTSSSFSFPLTIPETDTQDPIEKLKEAIMSTQKNPKFVVLEDTP 153
Query: 157 YGQYLEAEVD-GNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKI 216
YG+Y+EAEV+ G F RDV+EFLVK DV AYR MATKVT+VYPFTTA GDSKGQEER++K+
Sbjct: 154 YGRYVEAEVEGGGFSRDVMEFLVKQDVVAYRCMATKVTFVYPFTTAFGDSKGQEERLKKL 213
Query: 217 IDQLDWYSPTFESMD 230
IDQL WY+PTFESM+
Sbjct: 214 IDQLGWYAPTFESME 225
BLAST of CcUC03G046120 vs. ExPASy TrEMBL
Match:
A0A0A0LRK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050570 PE=4 SV=1)
HSP 1 Score: 431.4 bits (1108), Expect = 2.4e-117
Identity = 216/232 (93.10%), Postives = 224/232 (96.55%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKK--KKKNQYHSPASLPSMAALQNSNHKPIFLSHLLSFALSVTLS 60
MSSLQFRPPLVSPWKKK KNQYHSP S+PSM+ LQN+NHKPIFLSHLLSFALS+TLS
Sbjct: 1 MSSLQFRPPLVSPWKKKDNNNKNQYHSPVSVPSMSTLQNANHKPIFLSHLLSFALSITLS 60
Query: 61 SPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFA 120
SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPS NPSCVSTNPKSSSFA
Sbjct: 61 SPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSANPSCVSTNPKSSSFA 120
Query: 121 FPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVK 180
FPLNIP+NFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV+
Sbjct: 121 FPLNIPDNFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVR 180
Query: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 231
GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 232
BLAST of CcUC03G046120 vs. ExPASy TrEMBL
Match:
A0A5A7UK02 (Thylakoid lumenal 17.9 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004760 PE=4 SV=1)
HSP 1 Score: 427.9 bits (1099), Expect = 2.6e-116
Identity = 216/233 (92.70%), Postives = 224/233 (96.14%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKK---KKKNQYHSPASLPSMAALQNSNHKPIFLSHLLSFALSVTL 60
MSSLQFRP LVSPWKKK KNQYHSP S+PSM+ALQN NHKPIFLSHLLSFALS+TL
Sbjct: 1 MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60
Query: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
+SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF
Sbjct: 61 TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
Query: 121 AFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
AFPLNIP+NFSGNPIQKLQEAILETQRNPKIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 231
KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 233
BLAST of CcUC03G046120 vs. ExPASy TrEMBL
Match:
A0A1S3AZP3 (thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484512 PE=4 SV=1)
HSP 1 Score: 427.9 bits (1099), Expect = 2.6e-116
Identity = 216/233 (92.70%), Postives = 224/233 (96.14%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKK---KKKNQYHSPASLPSMAALQNSNHKPIFLSHLLSFALSVTL 60
MSSLQFRP LVSPWKKK KNQYHSP S+PSM+ALQN NHKPIFLSHLLSFALS+TL
Sbjct: 1 MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60
Query: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
+SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF
Sbjct: 61 TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
Query: 121 AFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
AFPLNIP+NFSGNPIQKLQEAILETQRNPKIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 231
KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 233
BLAST of CcUC03G046120 vs. ExPASy TrEMBL
Match:
A0A6J1C708 (thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111008832 PE=4 SV=1)
HSP 1 Score: 392.5 bits (1007), Expect = 1.2e-105
Identity = 204/233 (87.55%), Postives = 212/233 (90.99%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKKKKKNQYHSP----ASLPSMAALQNSNHKPIFLSHLLSFALSVT 60
MSSL+F PPLVSPWKKKKKKN HSP SLPSMAALQNS+ KPI LSHLLSFALSVT
Sbjct: 1 MSSLRFPPPLVSPWKKKKKKNN-HSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVT 60
Query: 61 LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSS 120
LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNL GLENGKI PCPSTNP+CVSTNPKSSS
Sbjct: 61 LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSS 120
Query: 121 FAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
FAFPL+IPENF+ NPIQKLQE IL+TQRN KIQVVEDTPYGQYLEAEVDGNFGRDVIEFL
Sbjct: 121 FAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
Query: 181 VKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMD 230
VKGDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTF+SMD
Sbjct: 181 VKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
BLAST of CcUC03G046120 vs. ExPASy TrEMBL
Match:
A0A6J1GT70 (thylakoid lumenal 17.9 kDa protein, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457250 PE=4 SV=1)
HSP 1 Score: 390.6 bits (1002), Expect = 4.6e-105
Identity = 199/234 (85.04%), Postives = 213/234 (91.03%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKKKKKNQYHSP----ASLPSMAALQNSNHKPIFLSHLLSFALSVT 60
MSSL FRP LVSPWKKKKK NQ+ S S PSMAAL N NHKPIF+SHLLSFALS+T
Sbjct: 1 MSSLHFRPALVSPWKKKKKNNQFLSAVLNRTSPPSMAALPNPNHKPIFISHLLSFALSIT 60
Query: 61 LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSS 120
L+SPFPSLAIPS NSLSSPLSPTTPFSQSK+LP GLENGKI PCPSTNPSCVSTNPKSSS
Sbjct: 61 LTSPFPSLAIPSFNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS 120
Query: 121 FAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
FAF L+IPE+F+GNPIQKLQE ILETQRN KIQ+VEDTPYGQY+EAEVDGNFGRDVIEFL
Sbjct: 121 FAFSLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYMEAEVDGNFGRDVIEFL 180
Query: 181 VKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 231
V+GDVAAYRIMA KVTYVYPFTTALGDSKGQEERM+KII++LDWYSPTFESM D
Sbjct: 181 VRGDVAAYRIMAAKVTYVYPFTTALGDSKGQEERMKKIIEELDWYSPTFESMVD 234
BLAST of CcUC03G046120 vs. TAIR 10
Match:
AT4G24930.1 (thylakoid lumenal 17.9 kDa protein, chloroplast )
HSP 1 Score: 251.1 bits (640), Expect = 8.4e-67
Identity = 133/195 (68.21%), Postives = 161/195 (82.56%), Query Frame = 0
Query: 37 NSNHKPI-FLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENG 96
+S PI L L+SFAL+++L+S P+LAIPSL+S S PL TTPF+QSK + TGL NG
Sbjct: 34 SSTSPPISLLPKLISFALAISLTSFSPALAIPSLSS-SQPL--TTPFTQSKFVQTGLLNG 93
Query: 97 KIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTP 156
KI PCPSTNP CVSTNP SSSF+FPL IPE + +PI+KL+EAI+ TQ+NPK V+EDTP
Sbjct: 94 KIRPCPSTNPGCVSTNPTSSSFSFPLTIPETDTQDPIEKLKEAIMSTQKNPKFVVLEDTP 153
Query: 157 YGQYLEAEVD-GNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKI 216
YG+Y+EAEV+ G F RDV+EFLVK DV AYR MATKVT+VYPFTTA GDSKGQEER++K+
Sbjct: 154 YGRYVEAEVEGGGFSRDVMEFLVKQDVVAYRCMATKVTFVYPFTTAFGDSKGQEERLKKL 213
Query: 217 IDQLDWYSPTFESMD 230
IDQL WY+PTFESM+
Sbjct: 214 IDQLGWYAPTFESME 225
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038893869.1 | 5.0e-122 | 97.39 | thylakoid lumenal 17.9 kDa protein, chloroplastic [Benincasa hispida] | [more] |
XP_004154123.1 | 4.9e-117 | 93.10 | thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis sativus] >KGN64418.1 ... | [more] |
XP_008439847.1 | 5.4e-116 | 92.70 | PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis melo] >KAA... | [more] |
XP_022137359.1 | 2.5e-105 | 87.55 | thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 [Momordica cha... | [more] |
KAG7012320.1 | 9.5e-105 | 84.62 | Thylakoid lumenal 17.9 kDa protein, chloroplastic, partial [Cucurbita argyrosper... | [more] |
Match Name | E-value | Identity | Description | |
Q9SW33 | 1.2e-65 | 68.21 | Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LRK9 | 2.4e-117 | 93.10 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050570 PE=4 SV=1 | [more] |
A0A5A7UK02 | 2.6e-116 | 92.70 | Thylakoid lumenal 17.9 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
A0A1S3AZP3 | 2.6e-116 | 92.70 | thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC... | [more] |
A0A6J1C708 | 1.2e-105 | 87.55 | thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 OS=Momordica c... | [more] |
A0A6J1GT70 | 4.6e-105 | 85.04 | thylakoid lumenal 17.9 kDa protein, chloroplastic isoform X2 OS=Cucurbita moscha... | [more] |
Match Name | E-value | Identity | Description | |
AT4G24930.1 | 8.4e-67 | 68.21 | thylakoid lumenal 17.9 kDa protein, chloroplast | [more] |