CcUC03G045890 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC03G045890
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	WD repeat-containing protein 74
Location	CicolChr03: 3937889 .. 3939535 (+)
RNA-Seq Expression	CcUC03G045890
Synteny	CcUC03G045890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAAATTTCTTCGGTAGGGTTTATCAGTCCAGCGAAAAACTGTGTGGCAACTGATCTGCAAACTATGCCTCGTACGACGAAGGTTGATTGCAGCGGCTGTCCTCCGCTTCGTGCCCTAACGTTCGATGTTCTTGGTCTTGTCAAAGGTAATAATGGCAATCTAAAGTTTCCACTTTACTCTGCCACGGTTTCCTTTGAATTTTCTTCTCAATTTCATTGTTCCGCCACTGAACAGTCATTGAAGCTCGGGGCAAGGAAGGAGAGATTCCGAAAGTCGTTGATAGATGGGGCGAACCTGATTTCTCCAAATCAGTGCTTGCAGCTTCTCTTGTTGATCGTAAATTCGACCCTGTAGGTTTCTTTCTTGCTACTTTTCGAATCGTTCATTGTTATCGTACCCTCTTATAAAAAATTTTTATGTGTCATTGTTGTGGATTCATAGTCATTGGAAGTTCTACGTTCAATATATTTTGTGTTTTCTATCTAGGCTGTGGGTGTGCTTTGGTTTTCTGGCCTTACAATTTCTTCTCTTGATTAGTGGGGGTTATACTTATACCGACCTCCACTGGGTTGATGTCTGCCTATTGGGAGATTGTATATTTCACTTCTCATTTAAGTTCAATTCAAACGCTACATTATTCTTAGTGCATCAAATCACTTCCTTTTCTTTTTTTTAATTGCAGTTATTAGCTGTTGCTCGAAAAAATGGTCTGGTAAGTTGTTCAGATTTCTAGTAATGTGAATCATGCTCGCACATCTTTATACAATAAACTAGTGCACTCCTCTTAGTTAATCATGTTTCTGCTGTTTGCTGCAGATTGAAGTTCTTAATCCTTTGAATGGCAATCTTCACGTTGCAATTTCGGACAATACCCATACTTCTCCTCCACCAAAAGATGAAGCTATTGTTGGAATGCATTTATTTTCAAAAGATGAATTGGAGGTGGCGGCATCTAGGTTATATATCAGTTTATAATTTGTGAGCTTGTTATATTATCATTTGATAGAAGTGCAAAAGTTATAATCCTTTTGTTAACAATGAAATATCAAATTTTCTCTTAAACCATCTATGCTGAAATTCCTCATTGTTTGATTATTTATTTTTAGGCGTTGCACCTTGCTTTCATGTACAACAAAAGGAAATGCAAGCATGAGGTCGATTGAATTTTCTAGTTCATCTTCGAACGATACCTCTACCAATCTTGTAAAAACGTGGAAAGTATGTGGTTCCGGTGATGTTATGTGTTCTAAAGTTGATGGAAGTGAAACCCATGCATTGTTTGGAGGGTGAGTAGAGATCATGTTTGAATTTTTAGTGTTATCTTTATATCGGCATTAATGACCTTTACCTTTTTGTATGCACAGGAAGGGTGTTGAAGTTAATATGTGGAATCTAGAACAGTGTACTAAGATTTGGACAGCAAAAGCGGTATGCTTCTTAGTTCTCCTTTGCACTTCTGTATAAAGCAGTCAGTCCTAGAGAATTTTTTTATATCCTTTTGAAACTTTTTCATTTGATTCAGCCGAAGAAGAACAGCCTTGGTATTTTCACACCAACTTGGTTCACATCAGCAACATTTCTTAGTAAAGATGATCACCGTAAGTTTGCAGCTGGTACCAACAGCCATCAGGTAATTGTAATTCAT

mRNA sequence

CTGAAATTTCTTCGGTAGGGTTTATCAGTCCAGCGAAAAACTGTGTGGCAACTGATCTGCAAACTATGCCTCGTACGACGAAGGTTGATTGCAGCGGCTGTCCTCCGCTTCGTGCCCTAACGTTCGATGTTCTTGGTCTTGTCAAAGTCATTGAAGCTCGGGGCAAGGAAGGAGAGATTCCGAAAGTCGTTGATAGATGGGGCGAACCTGATTTCTCCAAATCAGTGCTTGCAGCTTCTCTTGTTGATCGTAAATTCGACCCTTTATTAGCTGTTGCTCGAAAAAATGGTCTGATTGAAGTTCTTAATCCTTTGAATGGCAATCTTCACGTTGCAATTTCGGACAATACCCATACTTCTCCTCCACCAAAAGATGAAGCTATTGTTGGAATGCATTTATTTTCAAAAGATGAATTGGAGGTGGCGGCATCTAGGCGTTGCACCTTGCTTTCATGTACAACAAAAGGAAATGCAAGCATGAGGTCGATTGAATTTTCTAGTTCATCTTCGAACGATACCTCTACCAATCTTGTAAAAACGTGGAAAGTATGTGGTTCCGGTGATGTTATGTGTTCTAAAGTTGATGGAAGTGAAACCCATGCATTGTTTGGAGGGAAGGGTGTTGAAGTTAATATGTGGAATCTAGAACAGTGTACTAAGATTTGGACAGCAAAAGCGCCGAAGAAGAACAGCCTTGGTATTTTCACACCAACTTGGTTCACATCAGCAACATTTCTTAGTAAAGATGATCACCGTAAGTTTGCAGCTGGTACCAACAGCCATCAGGTAATTGTAATTCAT

Coding sequence (CDS)

ATGCCTCGTACGACGAAGGTTGATTGCAGCGGCTGTCCTCCGCTTCGTGCCCTAACGTTCGATGTTCTTGGTCTTGTCAAAGTCATTGAAGCTCGGGGCAAGGAAGGAGAGATTCCGAAAGTCGTTGATAGATGGGGCGAACCTGATTTCTCCAAATCAGTGCTTGCAGCTTCTCTTGTTGATCGTAAATTCGACCCTTTATTAGCTGTTGCTCGAAAAAATGGTCTGATTGAAGTTCTTAATCCTTTGAATGGCAATCTTCACGTTGCAATTTCGGACAATACCCATACTTCTCCTCCACCAAAAGATGAAGCTATTGTTGGAATGCATTTATTTTCAAAAGATGAATTGGAGGTGGCGGCATCTAGGCGTTGCACCTTGCTTTCATGTACAACAAAAGGAAATGCAAGCATGAGGTCGATTGAATTTTCTAGTTCATCTTCGAACGATACCTCTACCAATCTTGTAAAAACGTGGAAAGTATGTGGTTCCGGTGATGTTATGTGTTCTAAAGTTGATGGAAGTGAAACCCATGCATTGTTTGGAGGGAAGGGTGTTGAAGTTAATATGTGGAATCTAGAACAGTGTACTAAGATTTGGACAGCAAAAGCGCCGAAGAAGAACAGCCTTGGTATTTTCACACCAACTTGGTTCACATCAGCAACATTTCTTAGTAAAGATGATCACCGTAAGTTTGCAGCTGGTACCAACAGCCATCAGGTAATTGTAATTCAT

Protein sequence

MPRTTKVDCSGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVDRWGEPDFSKSVLAASLVDRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTHTSPPPKDEAIVGMHLFSKDELEVAASRRCTLLSCTTKGNASMRSIEFSSSSSNDTSTNLVKTWKVCGSGDVMCSKVDGSETHALFGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQVIVIH

Homology

[Close]

BLAST of CcUC03G045890 vs. NCBI nr
Match: XP_008439461.1 (PREDICTED: WD repeat-containing protein 74 [Cucumis melo] >ADN33953.1 WD-repeat protein [Cucumis melo subsp. melo] >TYJ99243.1 WD repeat-containing protein 74 [Cucumis melo var. makuwa])

HSP 1 Score: 467.6 bits (1202), Expect = 6.5e-128
Identity = 230/241 (95.44%), Postives = 233/241 (96.68%), Query Frame = 0


Query: 1   MPRTTKVDCSGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVDRWGEPDFSKSVLAASLV 60
           MPRTT +DC GCPPLRALTFDVLGLVKVIEARGKEGEIPKVV+RWGEPDFSKSVLAASL 
Sbjct: 1   MPRTTTLDCPGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLA 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTHTSPPPKDEAIVGMHLFSKDELEVA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNT TSPPPKDEAIVGMHLFSKDELEV 
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLFSKDELEV- 120

Query: 121 ASRRCTLLSCTTKGNASMRSIEFSSSSSNDTSTNLVKTWKVCGSGDVMCSKVDGSETHAL 180
            SRRCTLLSCTTKGNASMRSIEFSSSSS D STNLVKTWKVCGSGDVMCSKVDGSETHAL
Sbjct: 121 ESRRCTLLSCTTKGNASMRSIEFSSSSSRDASTNLVKTWKVCGSGDVMCSKVDGSETHAL 180

Query: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240
           FGGKGVEVNMWNLEQCTKIWTAKAPKKN+LGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ
Sbjct: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNNLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240

Query: 241 V 242
           V
Sbjct: 241 V 240

[Close]

BLAST of CcUC03G045890 vs. NCBI nr
Match: XP_038894722.1 (LOW QUALITY PROTEIN: WD repeat-containing protein 74 [Benincasa hispida])

HSP 1 Score: 464.9 bits (1195), Expect = 4.2e-127
Identity = 228/241 (94.61%), Postives = 232/241 (96.27%), Query Frame = 0


Query: 1   MPRTTKVDCSGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVDRWGEPDFSKSVLAASLV 60
           MPRTT VDC GCPPLRALTFDVLGLVKVIEARGKEGEIPKVVDRWGEPDFSKSVLAASL+
Sbjct: 1   MPRTTTVDCRGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVDRWGEPDFSKSVLAASLI 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTHTSPPPKDEAIVGMHLFSKDELEVA 120
           DRKFDPLLAVARKNGLIEVLNPLNG+LHV ISDNT TSPPPKDEAIVGMHLFSKDELEV 
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGDLHVVISDNTDTSPPPKDEAIVGMHLFSKDELEV- 120

Query: 121 ASRRCTLLSCTTKGNASMRSIEFSSSSSNDTSTNLVKTWKVCGSGDVMCSKVDGSETHAL 180
            SR CTLLSCTTKGNASMRS EFSSSSS DTSTNLV++WKVCGSGDVMCSKVDGSETHAL
Sbjct: 121 ESRHCTLLSCTTKGNASMRSFEFSSSSSKDTSTNLVRSWKVCGSGDVMCSKVDGSETHAL 180

Query: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240
           FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ
Sbjct: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240

Query: 241 V 242
           V
Sbjct: 241 V 240

[Close]

BLAST of CcUC03G045890 vs. NCBI nr
Match: KAA0055318.1 (WD repeat-containing protein 74 [Cucumis melo var. makuwa])

HSP 1 Score: 462.6 bits (1189), Expect = 2.1e-126
Identity = 228/241 (94.61%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 1   MPRTTKVDCSGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVDRWGEPDFSKSVLAASLV 60
           MPRTT +DC GCPPLRALTFDVLGLVKVIEARGKEGEIPKVV+RWGEPDFSKSVLAASL 
Sbjct: 1   MPRTTTLDCPGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLA 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTHTSPPPKDEAIVGMHLFSKDELEVA 120
           DRKFDPLLAVARKNGLIEVLNPLNG LHVAISDNT TSPPPKDEAIVGMHLFSKDELEV 
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGTLHVAISDNTDTSPPPKDEAIVGMHLFSKDELEV- 120

Query: 121 ASRRCTLLSCTTKGNASMRSIEFSSSSSNDTSTNLVKTWKVCGSGDVMCSKVDGSETHAL 180
            SRRCTLLSCTTKGNASMRSIEFSSSSS D STNLVKTWKVCGSGDVMCSKVDGSETHAL
Sbjct: 121 ESRRCTLLSCTTKGNASMRSIEFSSSSSRDASTNLVKTWKVCGSGDVMCSKVDGSETHAL 180

Query: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240
           FGGKGVEVNMWNLEQCTKIWTAKAPKKN+LGIFTPTWFTSATFLSK DHRKFAAGTNSHQ
Sbjct: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNNLGIFTPTWFTSATFLSKHDHRKFAAGTNSHQ 240

Query: 241 V 242
           V
Sbjct: 241 V 240

[Close]

BLAST of CcUC03G045890 vs. NCBI nr
Match: XP_022923633.1 (WD repeat-containing protein 74-like [Cucurbita moschata])

HSP 1 Score: 462.2 bits (1188), Expect = 2.7e-126
Identity = 226/241 (93.78%), Postives = 232/241 (96.27%), Query Frame = 0


Query: 1   MPRTTKVDCSGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVDRWGEPDFSKSVLAASLV 60
           MPRTTKVDC GCPPLRAL FDVLGL+KVIEARGKEGEIPKVV+RWGEPDFSKSVLAASLV
Sbjct: 1   MPRTTKVDCPGCPPLRALMFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTHTSPPPKDEAIVGMHLFSKDELEVA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNT TSPPPKDEAIVGMHL SKDE E+ 
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESEL- 120

Query: 121 ASRRCTLLSCTTKGNASMRSIEFSSSSSNDTSTNLVKTWKVCGSGDVMCSKVDGSETHAL 180
           ASRRCTLLSCTTKGNASMR+IEFSSSSS DTSTNL +TWK+C SGDVMCSKVDGSETHAL
Sbjct: 121 ASRRCTLLSCTTKGNASMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHAL 180

Query: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240
           FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ
Sbjct: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240

Query: 241 V 242
           V
Sbjct: 241 V 240

[Close]

BLAST of CcUC03G045890 vs. NCBI nr
Match: KAG6584141.1 (WD repeat-containing protein 74, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 461.8 bits (1187), Expect = 3.6e-126
Identity = 226/241 (93.78%), Postives = 232/241 (96.27%), Query Frame = 0


Query: 1   MPRTTKVDCSGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVDRWGEPDFSKSVLAASLV 60
           MPRTTKVDC GCPPLRALTFDVLGL+KVIEARGKEGEIPKVV+RWGEPDFSKSVLAASLV
Sbjct: 1   MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTHTSPPPKDEAIVGMHLFSKDELEVA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNT TSPPPKDEAIVGMHL SKDE E+ 
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESEL- 120

Query: 121 ASRRCTLLSCTTKGNASMRSIEFSSSSSNDTSTNLVKTWKVCGSGDVMCSKVDGSETHAL 180
           ASRRCTLLSCTTKGNASMR+IEFSSSSS DTSTNL +TWK+C SGDVMCSKVDGSETHAL
Sbjct: 121 ASRRCTLLSCTTKGNASMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHAL 180

Query: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240
           FGGKGVEVNMWNLEQCTKIWTAKAPKKNS GIFTPTWFTSATFLSKDDHRKFAAGTNSHQ
Sbjct: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNSHGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240

Query: 241 V 242
           V
Sbjct: 241 V 240

[Close]

BLAST of CcUC03G045890 vs. ExPASy TrEMBL
Match: A0A5D3BIZ1 (WD repeat-containing protein 74 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004540 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.2e-128
Identity = 230/241 (95.44%), Postives = 233/241 (96.68%), Query Frame = 0


Query: 1   MPRTTKVDCSGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVDRWGEPDFSKSVLAASLV 60
           MPRTT +DC GCPPLRALTFDVLGLVKVIEARGKEGEIPKVV+RWGEPDFSKSVLAASL 
Sbjct: 1   MPRTTTLDCPGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLA 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTHTSPPPKDEAIVGMHLFSKDELEVA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNT TSPPPKDEAIVGMHLFSKDELEV 
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLFSKDELEV- 120

Query: 121 ASRRCTLLSCTTKGNASMRSIEFSSSSSNDTSTNLVKTWKVCGSGDVMCSKVDGSETHAL 180
            SRRCTLLSCTTKGNASMRSIEFSSSSS D STNLVKTWKVCGSGDVMCSKVDGSETHAL
Sbjct: 121 ESRRCTLLSCTTKGNASMRSIEFSSSSSRDASTNLVKTWKVCGSGDVMCSKVDGSETHAL 180

Query: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240
           FGGKGVEVNMWNLEQCTKIWTAKAPKKN+LGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ
Sbjct: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNNLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240

Query: 241 V 242
           V
Sbjct: 241 V 240

[Close]

BLAST of CcUC03G045890 vs. ExPASy TrEMBL
Match: E5GBV4 (WD-repeat protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.2e-128
Identity = 230/241 (95.44%), Postives = 233/241 (96.68%), Query Frame = 0


Query: 1   MPRTTKVDCSGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVDRWGEPDFSKSVLAASLV 60
           MPRTT +DC GCPPLRALTFDVLGLVKVIEARGKEGEIPKVV+RWGEPDFSKSVLAASL 
Sbjct: 1   MPRTTTLDCPGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLA 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTHTSPPPKDEAIVGMHLFSKDELEVA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNT TSPPPKDEAIVGMHLFSKDELEV 
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLFSKDELEV- 120

Query: 121 ASRRCTLLSCTTKGNASMRSIEFSSSSSNDTSTNLVKTWKVCGSGDVMCSKVDGSETHAL 180
            SRRCTLLSCTTKGNASMRSIEFSSSSS D STNLVKTWKVCGSGDVMCSKVDGSETHAL
Sbjct: 121 ESRRCTLLSCTTKGNASMRSIEFSSSSSRDASTNLVKTWKVCGSGDVMCSKVDGSETHAL 180

Query: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240
           FGGKGVEVNMWNLEQCTKIWTAKAPKKN+LGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ
Sbjct: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNNLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240

Query: 241 V 242
           V
Sbjct: 241 V 240

[Close]

BLAST of CcUC03G045890 vs. ExPASy TrEMBL
Match: A0A1S3AYE7 (WD repeat-containing protein 74 OS=Cucumis melo OX=3656 GN=LOC103484256 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.2e-128
Identity = 230/241 (95.44%), Postives = 233/241 (96.68%), Query Frame = 0


Query: 1   MPRTTKVDCSGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVDRWGEPDFSKSVLAASLV 60
           MPRTT +DC GCPPLRALTFDVLGLVKVIEARGKEGEIPKVV+RWGEPDFSKSVLAASL 
Sbjct: 1   MPRTTTLDCPGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLA 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTHTSPPPKDEAIVGMHLFSKDELEVA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNT TSPPPKDEAIVGMHLFSKDELEV 
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLFSKDELEV- 120

Query: 121 ASRRCTLLSCTTKGNASMRSIEFSSSSSNDTSTNLVKTWKVCGSGDVMCSKVDGSETHAL 180
            SRRCTLLSCTTKGNASMRSIEFSSSSS D STNLVKTWKVCGSGDVMCSKVDGSETHAL
Sbjct: 121 ESRRCTLLSCTTKGNASMRSIEFSSSSSRDASTNLVKTWKVCGSGDVMCSKVDGSETHAL 180

Query: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240
           FGGKGVEVNMWNLEQCTKIWTAKAPKKN+LGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ
Sbjct: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNNLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240

Query: 241 V 242
           V
Sbjct: 241 V 240

[Close]

BLAST of CcUC03G045890 vs. ExPASy TrEMBL
Match: A0A5A7UJY9 (WD repeat-containing protein 74 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G001610 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.0e-126
Identity = 228/241 (94.61%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 1   MPRTTKVDCSGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVDRWGEPDFSKSVLAASLV 60
           MPRTT +DC GCPPLRALTFDVLGLVKVIEARGKEGEIPKVV+RWGEPDFSKSVLAASL 
Sbjct: 1   MPRTTTLDCPGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLA 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTHTSPPPKDEAIVGMHLFSKDELEVA 120
           DRKFDPLLAVARKNGLIEVLNPLNG LHVAISDNT TSPPPKDEAIVGMHLFSKDELEV 
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGTLHVAISDNTDTSPPPKDEAIVGMHLFSKDELEV- 120

Query: 121 ASRRCTLLSCTTKGNASMRSIEFSSSSSNDTSTNLVKTWKVCGSGDVMCSKVDGSETHAL 180
            SRRCTLLSCTTKGNASMRSIEFSSSSS D STNLVKTWKVCGSGDVMCSKVDGSETHAL
Sbjct: 121 ESRRCTLLSCTTKGNASMRSIEFSSSSSRDASTNLVKTWKVCGSGDVMCSKVDGSETHAL 180

Query: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240
           FGGKGVEVNMWNLEQCTKIWTAKAPKKN+LGIFTPTWFTSATFLSK DHRKFAAGTNSHQ
Sbjct: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNNLGIFTPTWFTSATFLSKHDHRKFAAGTNSHQ 240

Query: 241 V 242
           V
Sbjct: 241 V 240

[Close]

BLAST of CcUC03G045890 vs. ExPASy TrEMBL
Match: A0A6J1EA63 (WD repeat-containing protein 74-like OS=Cucurbita moschata OX=3662 GN=LOC111431283 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.3e-126
Identity = 226/241 (93.78%), Postives = 232/241 (96.27%), Query Frame = 0


Query: 1   MPRTTKVDCSGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVDRWGEPDFSKSVLAASLV 60
           MPRTTKVDC GCPPLRAL FDVLGL+KVIEARGKEGEIPKVV+RWGEPDFSKSVLAASLV
Sbjct: 1   MPRTTKVDCPGCPPLRALMFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTHTSPPPKDEAIVGMHLFSKDELEVA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNT TSPPPKDEAIVGMHL SKDE E+ 
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESEL- 120

Query: 121 ASRRCTLLSCTTKGNASMRSIEFSSSSSNDTSTNLVKTWKVCGSGDVMCSKVDGSETHAL 180
           ASRRCTLLSCTTKGNASMR+IEFSSSSS DTSTNL +TWK+C SGDVMCSKVDGSETHAL
Sbjct: 121 ASRRCTLLSCTTKGNASMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHAL 180

Query: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240
           FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ
Sbjct: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240

Query: 241 V 242
           V
Sbjct: 241 V 240

[Close]

BLAST of CcUC03G045890 vs. TAIR 10
Match: AT1G29320.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 293.9 bits (751), Expect = 1.2e-79
Identity = 144/241 (59.75%), Postives = 176/241 (73.03%), Query Frame = 0


Query: 1   MPRTTKVDCSGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVDRWGEPDFSKSVLAASLV 60
           MPR    +  GCPP RALTFD LGL+KV EARG+E  IP VV+ WGE + S+SVLAAS+ 
Sbjct: 1   MPRVIPPENLGCPPFRALTFDSLGLIKVTEARGQERGIPTVVNTWGEMNASRSVLAASID 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTHTSPPPKDEAIVGMHLFSKDELEVA 120
           DR  +PLLAVARK+G +EV+NP NG+LH + S        P+D  I  +HLF K +++  
Sbjct: 61  DRLRNPLLAVARKDGNVEVINPCNGDLHFSYSVFGDDGCSPEDNEISALHLFRK-KIDDQ 120

Query: 121 ASRRCTLLSCTTKGNASMRSIEFSSSSSNDTSTNLVKTWKVCGSGDVMCSKVDGSETHAL 180
             R CTLL+CT KG+ S+RS++F  +  N T     KTWK CGSG+++  KVDGSE  +L
Sbjct: 121 TERSCTLLTCTKKGDVSLRSVKFPDAHGNSTDDASPKTWKACGSGEILVGKVDGSENFSL 180

Query: 181 FGGKGVEVNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQ 240
           FGGK VE N+W+LEQCTKIW+AK P KN+LGIFTPTWFTSATFLSKDDHRKF  GT SHQ
Sbjct: 181 FGGKRVEANIWDLEQCTKIWSAKCPPKNNLGIFTPTWFTSATFLSKDDHRKFVTGTKSHQ 240

Query: 241 V 242
           V
Sbjct: 241 V 240

The following BLAST results are available for this feature:

BLAST of CcUC03G045890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439461.1	6.5e-128	95.44	PREDICTED: WD repeat-containing protein 74 [Cucumis melo] >ADN33953.1 WD-repeat ...	[more]
XP_038894722.1	4.2e-127	94.61	LOW QUALITY PROTEIN: WD repeat-containing protein 74 [Benincasa hispida]	[more]
KAA0055318.1	2.1e-126	94.61	WD repeat-containing protein 74 [Cucumis melo var. makuwa]	[more]
XP_022923633.1	2.7e-126	93.78	WD repeat-containing protein 74-like [Cucurbita moschata]	[more]
KAG6584141.1	3.6e-126	93.78	WD repeat-containing protein 74, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CcUC03G045890 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC03G045890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BIZ1	3.2e-128	95.44	WD repeat-containing protein 74 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
E5GBV4	3.2e-128	95.44	WD-repeat protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3AYE7	3.2e-128	95.44	WD repeat-containing protein 74 OS=Cucumis melo OX=3656 GN=LOC103484256 PE=4 SV=...	[more]
A0A5A7UJY9	1.0e-126	94.61	WD repeat-containing protein 74 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A6J1EA63	1.3e-126	93.78	WD repeat-containing protein 74-like OS=Cucurbita moschata OX=3662 GN=LOC1114312...	[more]

BLAST of CcUC03G045890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29320.1	1.2e-79	59.75	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR16038:SF5	BNAANNG21410D PROTEIN	coord: 1..242
IPR037379	WDR74/Nsa1	PANTHER	PTHR16038	NOP SEVEN ASSOCIATED PROTEIN 1	coord: 1..242
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 65..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC03G045890.1	CcUC03G045890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042273	ribosomal large subunit biogenesis
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor