CcUC03G044390 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC03G044390
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	YrdC-like domain-containing protein
Location	CicolChr03: 2234512 .. 2239953 (+)
RNA-Seq Expression	CcUC03G044390
Synteny	CcUC03G044390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCACCTCACTCCGCCAACTGGGCGTCGACACTCATCCCGCAATTGCTCACTGCAAATCTTTTGATTTCAAATCCTTCACAATCCCACTTCTCTTTCTTCAAAACCCCGCTAGGGGTTCGCGGGGTTAGCTTCTTGGTCATCACGGTTGCTACAGACCTCTACCTCAATGAACACCCTTCCGGCGAAAATGGTTGAGAGTCTCTCTTTAATCAGAACCTTTGCGACTTTTCCCTCTTCTCACCGAGGTTTGCTTTCATTTTTTTTCATTTTTTTTTTTTTTTAATTTTTATAAATGCTTTAACTGATTATTGTAGGATCGAAACATTAATTACACAGATTTTTACGTTTTAGGTTCTCCCAATTATGGGCTACTTTCGTTCTTCCAACAAAATAGAGGATCAAGGTTGAGTTTTCCTAAAACGACATGGAGCTTGGAAAAATGTAGTATGCGCGTCGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGATGCTCTTAAAGCTGGGAAGGTTATTGCTGTCCCTACTGATACTCTCTATGGACTCGCTTGTGATGCTTGGTATGCCATTCCTATTATGGTTTTTTTTTTTGTGTGTAATTGTCTTATTTTGTGAGTTCTTATTCTTTTTGTTGCGGAAATTGAGGTGACAACACCTTCTGTTTATTCTTTTGTCAATGAGGAATGCCCTTATCAATAGTAATATAGATCTTTCATAAGAGGGGAGATTGATTCTTGCGATCTTGTTTAGTACAAAGTTTTTGGTGAGAGGTCTTGACCAGGAGTGCTTGTCTCACACTCACTCCCTTGGTTCTGATATGGGTGATGATGGTAGGAGCGCAGGTGGTAGTTCTGTTACTAGGTGATGTGGGTGAAAGATAGCTTGGCCGGAATTTAGTCTCGTGCAAAGCAAGGGACTCTTCTTCAGGAAAAGATGTCTTTCAGAGGCTTTGGTATGGGTGTAGCTAATTTCAAATAGTAGAGGAAAATGTTGCACGGTAGCATAAGAGAATCCTCGCGGGAAGATCCTTGCCCCGTGTTGCAACTGTCACGGAGGAAAATTGATGTAGGGATCATTTAGTTATTTTTATACTGTATTGTTACCGTTTTCAGTTTTTGTGTTGTAAGGCTTTAGTGGGCTGGCTGATCTTTAAGTTAGTTTTGTATTTGCCTATAAATAGGCTTGTTATCATCCCGGTTATAACATAATTAATAATACTCCAAGTTTGAAACTTTTTTCCAAGAGGTTTTCTTACATTAAAAACGAGTGGAGAATCTTCAAGAAGAAACTGGGAGTACCTTTCTTGTAGAGGTTAGACCTTCCAACACCGTTTCGATGTCCTTCTCATTCTCTCATCACATGAACATCTTTTTGTTTGAGAAGATGGTTAAGGAATCTGTTGCTTTGCTAAGGGCGTTTTGAAGGAACGTGTGGTCGAAATAGTGAGTTTGGTGTGAGAAGAGTCCTCTTGTAATTCTTGGTCTTTGATTAACAATGGACTTTGAGAAGTTTGTATACTGGTAGAAAGTTCATTCTATGATAACGCAACACTCATTTCAGTTGTGCAATTGGTTTAGTCCCATGAAATGCAAGTTGGATTACAGTTGGTAGATCAACAATGTTCTTGGGTGGATGGGTGAAAGTGAATGATGAGATGGCCCCTCATATTCATTTGTTAGAATTGTTTTGTAAAGGTAGTTCTTTATTGCGGGTGGGACGATATAGATGATGTTCTGGTTTAGGGGAGACTTTTTGTGAGGATGTCTCTTTATGAGCTTGTGTGTGGAGGAGATGGGCTCATTTTGTTTGGGTTTTCTGTAAATTGTGAAGGATAGTACTATTTTTGCATTTCTTTCTTGGTGATGGTCCAGTGGTTAGTGTTTGGATGGGGACTACTGGAAGAAATCCTTTGGTTTGTACCCTTGTTTTACAAGTTTGTGGAGTATCTTCCCTGTAAAAAATTGAAGATTTTTAAGAGAGCTTGAGAGCCAACGGGAGAGCCAAAGAGGTTGTAACATCTGAGCTTAGGAGGGTTATATAAATGAACTGAGACCACGTTAGGATATGAAAGCATGGTTAAGATAGGCTTAAAATAATTGATAGCTACTACCAATACCAACAAGGTGCACCTCCCTTTTCTGTGGCTCAATCATACGAACTTCAAAGTTAAGCATGCTTAGCTTGGAGCAATTCTAAGTTGGGTGACCTCCTGGGAAATTTTCGAGTAAGCATTTGAGTGGGGACAAAGTAGACTGAAAGGATCCTTGTTGGTTTGTAGTGAACATTCTTTACTCTTGGAACTAGTTTAAGATACGTAGATAATGTGGCTAGGTCACAGGAGATGCAAGGGAATGCTAGGGCCATCAATTCCCAAATTTGGATTCCGAATCTAAGTCTGAATCCTGAGCTTGGGGTGTTACAGAAGTCTCGTGAAAAAGAGCCCTTGGAGAGATTTGGTTTGGGCCTAAATTTCCGAAGATTTATGTACTTATCTCTCTTATGCACAACAACTAGAGCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTCTTTTTTTTTTAAAATCTTAGGCTAGTATTGTGGTAGGCTCTTTTTCCCTTTTCCTTTTCCTTTTTTATTTTTTGTATTGAGTATGTACTCTTTCACTTGTATTAACGAAGCTTATGCTTAGTTTTCATCCAGAATAATAACAGAAAATAGCCTTATGTAAAATTTTATTCTTCAACTCCAATGTCAATATTTATTGCCCTGACTTGTGCATAAGACAGTTGACTGTTTAAAAGAAGATAAAATGATCTTTTTGTTAAATCTTGAATGTCATTTTGGACAGTCGTCTAAAAGACATACTTTTATTTGGTTGCCTTTATCTCGCCCATTCCTGTTCTGAAATCCACCATTTTTCCTGTTTGATAGAACAATTGTTTTACTGCACGAATTATTTGGGAAGTACTGTATGGTGATACAATGTTATAAAATTGAGAGATACTTATGAAATACATCATTGTGTTTGAACTTAATCGTTACCACACTCTTCAGGATCTAAAAATGGTTTATCAATTAAGTATAATTTTTTAGATAGAATTTTCAAGTTTTCAAAAACACTCTTCTTTCATGAAAATATAGGAAGTATACTCTATAATTTTGTTAAATCATGAGATGTGTTTTTCAGAAAGAGGGTAACACAATATTCATTTTCGAAGTGCAAAGTTGATGAACAAAATTGAAGAGAGGTGTTTTCGTGTTTGTGAAACTATATGCACAAAGTAACTATTTCTAAACTTATAGCGTTGCAGTTTGCATTTATTTAACTGTGGTTTTCTGTGGGGATTAATTTTGCAGTTCTTCTGGAGCAGTCCATAGGATTTATGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGATGTCTCTGACATAACTCGTTTTGCTGTAACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCCTGGGCCTGTAACTGTTGTACTAAAAAGAGGTTTGTATTAGAAATCTGCTTGTTTATGCTGAGATAATAAATAACGCACTAAAGGTTGACAGTATTTTCGAACAATTAACCTTGAGGAGCATTATTTGATTGAAATAAAGTAAATAGGTTAATAAACACTGCTAATCCTTAAAATGAAGTAGCAATTTAATCAATAAACAGTATATAAGAATAACAATTTAGTTCATGTACTTATTATAAAAATCTAATCTCTACTTTGAAAAATTTTGTCAAAATAAAGTGTGAATTTTTACAATGCAATGACATCTTTGTTATTTTATAGACACATCCGCTATCTAATCCGTTTATTGATCTATATTTGGAAGAAATCTCATTCAATCTTTAACAATATTCTTCAAAAGGCAATTTCAAATGCCGTTTCTGAAAGTTAGTATTTGTCACATCGCCTATAAAAATAAGATATTAATTTTTTACATCCCATGTTAATGGATTGTACTGTAGATATTTAAATAGTTGCCCCCATGTCACACCTGCGTATCTGAGATTATGTTCATACATTTTAGTCTCCAATCTTCTTGTAGTCTGAGTATTTTACATTTAGGTATTTTGCAGGTGAGGCGAGTATTCTTGAGAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTTCGTGTACCCGATGCTGACTTTATTAGACTGATTTCTCGTAGATCAGAGACAGCATTGGCCCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGCGTTAATGACTTTGAAAACCTATGGCAACACTGTGCTTATGTATACGACGGTGGCGTTCTTCCTGCTGGACGAGCAGGCTCGACGATCATTGACCTCACCAAGCGTGGCACATATAAGATTCTCAGAGCTGGAAGGTACATTTCTTGTGATTCTTCTATTTACCTTAATAAGTGAAAGTAGTCTCCTATTGTAATGACTTTGCCACTGTAATACTGAAATTTTGAGGGAAAATATTAGGCGCGGATGGAAAACCATGTAGTTTTTGTTTTTTAGTTTTTGAAAATTAAGCCTCTAAACATCCCTTTCAGCTTTAAATTTCTTGCTTTATTATCTACTTTCTACCAATGTTTTCAAAAACCAAACCAAGTTTTGAAAATTAAAAAAATAGTTTTAAAACACTCATTTCTAGAATTTGACGAAGAATTCAACTCTCTTACTTATGAAAAATAAAAACAATTGTAAGAAATTGAGAGAAATTAGGCTTAATTTTTCAAAACAAAAAACCATAAGCTTACCAAATGGGGTTTAAAATTTTAGTTTGTCATTTTCTTGCCTAGTTCTATTAGGATAAAGCTTTGTCAAACTCCAAGAGCTAACAATACTATTTCTAGTCTTTTAACTCCACTCAAGGGCGATACTGTTACATAAATGATGGGTTGATTTAACACGATGTGATAAATAATAGATAGAAAAACATAGATAGTTCGACAAAAGTTTAAATAATTTAAGATTACATTAAATCACAGCTCAGGCTTCAGCAGCTGAAACTGTTTTGAAGTTTTTAGGTAAATTGAACCATCGTCATCATCATCAAAATTTTGGAAACAAAAGCATGAAGCAAATTAGAAGTGATTATATTTCTTTGTGATAGTTCTCATGATATTGATTGTACATTTGCAGTGCAAAGGAGCAGACTGTTGCAACACTTGAAAGGTATTCACTATTAGAAGAAGCAGCTAGCATTTGAGCATCAGAATCTTGTCTTCTTGTTCATTATCATAGAGGTTGCAAAGATTTTTTTGGTAGGCTGAGTTAAAGTAGATCAAGTCTAGATTGAGTCTTATGGCTTTACCATTTCATTTTTTATAATAACTATATTTCCGTTTGTTTATTAAGTTCTTGTTTTTATTTGTATAATTATGTAACATTTAG

mRNA sequence

CCCACCTCACTCCGCCAACTGGGCGTCGACACTCATCCCGCAATTGCTCACTGCAAATCTTTTGATTTCAAATCCTTCACAATCCCACTTCTCTTTCTTCAAAACCCCGCTAGGGGTTCGCGGGGTTAGCTTCTTGGTCATCACGGTTGCTACAGACCTCTACCTCAATGAACACCCTTCCGGCGAAAATGGTTGAGAGTCTCTCTTTAATCAGAACCTTTGCGACTTTTCCCTCTTCTCACCGAGATTTTTACGTTTTAGGTTCTCCCAATTATGGGCTACTTTCGTTCTTCCAACAAAATAGAGGATCAAGGTTGAGTTTTCCTAAAACGACATGGAGCTTGGAAAAATGTAGTATGCGCGTCGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGATGCTCTTAAAGCTGGGAAGGTTATTGCTGTCCCTACTGATACTCTCTATGGACTCGCTTGTGATGCTTGTTCTTCTGGAGCAGTCCATAGGATTTATGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGATGTCTCTGACATAACTCGTTTTGCTGTAACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCCTGGGCCTGTAACTGTTGTACTAAAAAGAGGTGAGGCGAGTATTCTTGAGAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTTCGTGTACCCGATGCTGACTTTATTAGACTGATTTCTCGTAGATCAGAGACAGCATTGGCCCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGCGTTAATGACTTTGAAAACCTATGGCAACACTGTGCTTATGTATACGACGGTGGCGTTCTTCCTGCTGGACGAGCAGGCTCGACGATCATTGACCTCACCAAGCGTGGCACATATAAGATTCTCAGAGCTGGAAGTGCAAAGGAGCAGACTGTTGCAACACTTGAAAGGTATTCACTATTAGAAGAAGCAGCTAGCATTTGAGCATCAGAATCTTGTCTTCTTGTTCATTATCATAGAGGTTGCAAAGATTTTTTTGGTAGGCTGAGTTAAAGTAGATCAAGTCTAGATTGAGTCTTATGGCTTTACCATTTCATTTTTTATAATAACTATATTTCCGTTTGTTTATTAAGTTCTTGTTTTTATTTGTATAATTATGTAACATTTAG

Coding sequence (CDS)

ATGAACACCCTTCCGGCGAAAATGGTTGAGAGTCTCTCTTTAATCAGAACCTTTGCGACTTTTCCCTCTTCTCACCGAGATTTTTACGTTTTAGGTTCTCCCAATTATGGGCTACTTTCGTTCTTCCAACAAAATAGAGGATCAAGGTTGAGTTTTCCTAAAACGACATGGAGCTTGGAAAAATGTAGTATGCGCGTCGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGATGCTCTTAAAGCTGGGAAGGTTATTGCTGTCCCTACTGATACTCTCTATGGACTCGCTTGTGATGCTTGTTCTTCTGGAGCAGTCCATAGGATTTATGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGATGTCTCTGACATAACTCGTTTTGCTGTAACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCCTGGGCCTGTAACTGTTGTACTAAAAAGAGGTGAGGCGAGTATTCTTGAGAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTTCGTGTACCCGATGCTGACTTTATTAGACTGATTTCTCGTAGATCAGAGACAGCATTGGCCCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGCGTTAATGACTTTGAAAACCTATGGCAACACTGTGCTTATGTATACGACGGTGGCGTTCTTCCTGCTGGACGAGCAGGCTCGACGATCATTGACCTCACCAAGCGTGGCACATATAAGATTCTCAGAGCTGGAAGTGCAAAGGAGCAGACTGTTGCAACACTTGAAAGGTATTCACTATTAGAAGAAGCAGCTAGCATTTGA

Protein sequence

MNTLPAKMVESLSLIRTFATFPSSHRDFYVLGSPNYGLLSFFQQNRGSRLSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSGAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTKRGTYKILRAGSAKEQTVATLERYSLLEEAASI

Homology

[Close]

BLAST of CcUC03G044390 vs. NCBI nr
Match: XP_038893581.1 (yrdC domain-containing protein, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 531.9 bits (1369), Expect = 3.3e-147
Identity = 272/286 (95.10%), Postives = 275/286 (96.15%), Query Frame = 0


Query: 1   MNTLPAKMVESLSLIRTFATFPSSHRDFYVLGSPNYGLLSFFQQNRGSRLSFPKTTWSLE 60
           MN LPAKMVESLSLIRTF TFPSSH     LGSPNYGL+SF QQNRGSR+SFPKTTWSLE
Sbjct: 1   MNILPAKMVESLSLIRTFVTFPSSH-----LGSPNYGLVSFLQQNRGSRVSFPKTTWSLE 60

Query: 61  KCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSGAVHRIYEI 120
           KC MRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS AVHRIYEI
Sbjct: 61  KCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSEAVHRIYEI 120

Query: 121 KGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPG 180
           KGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPG
Sbjct: 121 KGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPG 180

Query: 181 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240
           LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL
Sbjct: 181 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240

Query: 241 PAGRAGSTIIDLTKRGTYKILRAGSAKEQTVATLERYSLLEEAASI 287
           PAGRAGSTIIDLT+RGTYKILRAGSAKEQTVA LERYSLLEEAASI
Sbjct: 241 PAGRAGSTIIDLTERGTYKILRAGSAKEQTVAILERYSLLEEAASI 281

[Close]

BLAST of CcUC03G044390 vs. NCBI nr
Match: XP_004148791.1 (yrdC domain-containing protein, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 506.5 bits (1303), Expect = 1.5e-139
Identity = 255/286 (89.16%), Postives = 271/286 (94.76%), Query Frame = 0


Query: 1   MNTLPAKMVESLSLIRTFATFPSSHRDFYVLGSPNYGLLSFFQQNRGSRLSFPKTTWSLE 60
           MNTLPAKM +SLSLIRTF TFPSS      LGS NYG++SF Q+NRGSR+SF KT WSLE
Sbjct: 1   MNTLPAKMADSLSLIRTFTTFPSSQ-----LGSSNYGIVSFLQRNRGSRVSFLKTNWSLE 60

Query: 61  KCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSGAVHRIYEI 120
           KC MRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACS+ AVHRIYEI
Sbjct: 61  KCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEI 120

Query: 121 KGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPG 180
           KGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGE+S+L+KSLNPG
Sbjct: 121 KGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPG 180

Query: 181 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240
           LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL
Sbjct: 181 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240

Query: 241 PAGRAGSTIIDLTKRGTYKILRAGSAKEQTVATLERYSLLEEAASI 287
           PAGRAGSTIIDLT++GT+KI+RAGSA+EQT+ATLERYSLLE AA+I
Sbjct: 241 PAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI 281

[Close]

BLAST of CcUC03G044390 vs. NCBI nr
Match: XP_023521571.1 (yrdC domain-containing protein, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023523156.1 yrdC domain-containing protein, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 502.3 bits (1292), Expect = 2.8e-138
Identity = 256/285 (89.82%), Postives = 267/285 (93.68%), Query Frame = 0


Query: 1   MNTLPAKMVESLSLIRTFATFPSSHRDFYVLGSPNYGLLSFFQQNRGSRLSFPKTTWSLE 60
           MNTLPAKMVE LSLIRTFATFPSS      LG+PNYG +SF   NRGSRL+FPKT WSLE
Sbjct: 6   MNTLPAKMVEGLSLIRTFATFPSSQ-----LGAPNYGFVSFLHHNRGSRLNFPKTVWSLE 65

Query: 61  KCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSGAVHRIYEI 120
           KCSMRVEN LQALRPASEAFAQEAT+ALKAGKVIAVPTDTLYGLACDACSS AV+RIYEI
Sbjct: 66  KCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEI 125

Query: 121 KGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPG 180
           KGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGE+SILEKSLNPG
Sbjct: 126 KGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKRGESSILEKSLNPG 185

Query: 181 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240
           L+SIGVRVPDADFIRLISRRS TALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL
Sbjct: 186 LESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 245

Query: 241 PAGRAGSTIIDLTKRGTYKILRAGSAKEQTVATLERYSLLEEAAS 286
           PAGRAGSTIIDLTKRGT+KI+RAGSAKEQTVATL+RYSLLE+A S
Sbjct: 246 PAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLKRYSLLEDADS 285

[Close]

BLAST of CcUC03G044390 vs. NCBI nr
Match: XP_008465284.1 (PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis melo] >KAA0036981.1 yrdC domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 502.3 bits (1292), Expect = 2.8e-138
Identity = 251/286 (87.76%), Postives = 271/286 (94.76%), Query Frame = 0


Query: 1   MNTLPAKMVESLSLIRTFATFPSSHRDFYVLGSPNYGLLSFFQQNRGSRLSFPKTTWSLE 60
           MNTLPAKM +SLSLIRTFATFPSSH     LGS NYG++SF Q+NRGSR+SF KT WSLE
Sbjct: 1   MNTLPAKMADSLSLIRTFATFPSSH-----LGSSNYGIVSFLQRNRGSRVSFLKTDWSLE 60

Query: 61  KCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSGAVHRIYEI 120
           KC M VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACS+ AVHRIYEI
Sbjct: 61  KCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEI 120

Query: 121 KGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPG 180
           KGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGE+S+L+KSLNPG
Sbjct: 121 KGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPG 180

Query: 181 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240
           LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL
Sbjct: 181 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240

Query: 241 PAGRAGSTIIDLTKRGTYKILRAGSAKEQTVATLERYSLLEEAASI 287
           PAGRAGSTI+DLT+RGT+KI+RAGSA++QT+ATL+RYSLLE AA+I
Sbjct: 241 PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI 281

[Close]

BLAST of CcUC03G044390 vs. NCBI nr
Match: XP_022998259.1 (yrdC domain-containing protein, mitochondrial [Cucurbita maxima])

HSP 1 Score: 499.6 bits (1285), Expect = 1.8e-137
Identity = 255/285 (89.47%), Postives = 265/285 (92.98%), Query Frame = 0


Query: 1   MNTLPAKMVESLSLIRTFATFPSSHRDFYVLGSPNYGLLSFFQQNRGSRLSFPKTTWSLE 60
           MNT PAKMVE LSLIRTFATFPSS      LG+PNYG +SF   NRGSRL+FPKT WSLE
Sbjct: 6   MNTFPAKMVEGLSLIRTFATFPSSQ-----LGAPNYGFVSFLHHNRGSRLNFPKTAWSLE 65

Query: 61  KCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSGAVHRIYEI 120
           KCSMRVEN LQALRPASEAFAQEAT+ALKAGKVIAVPTDTLYGLACDACSS AV+RIYEI
Sbjct: 66  KCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEI 125

Query: 121 KGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPG 180
           KGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGE+SILEKSLNPG
Sbjct: 126 KGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKRGESSILEKSLNPG 185

Query: 181 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240
           L+SIGVRVPDADFIRLISRRS TALALTSANLSG+PSSVCVNDFENLWQHCAYVYDGGVL
Sbjct: 186 LESIGVRVPDADFIRLISRRSGTALALTSANLSGRPSSVCVNDFENLWQHCAYVYDGGVL 245

Query: 241 PAGRAGSTIIDLTKRGTYKILRAGSAKEQTVATLERYSLLEEAAS 286
           PAGRAGSTIIDLTKRG +KI+RAGSAKEQTVATLERYSLLEEA S
Sbjct: 246 PAGRAGSTIIDLTKRGMFKIIRAGSAKEQTVATLERYSLLEEADS 285

[Close]

BLAST of CcUC03G044390 vs. ExPASy Swiss-Prot
Match: Q0VC80 (YrdC domain-containing protein, mitochondrial OS=Bos taurus OX=9913 GN=YRDC PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.4e-44
Identity = 97/207 (46.86%), Postives = 132/207 (63.77%), Query Frame = 0


Query: 84  ATDALKAGKVIAVPTDTLYGLACDACSSGAVHRIYEIKGRKLTSPLAICVGDVSDITRFA 143
           A   L+AG V+AVPTDTLYGLAC A  S A+  +Y +KGR  T PLA+C+G V+D+ R+ 
Sbjct: 71  AVAELRAGAVVAVPTDTLYGLACSASCSEALGAVYRVKGRSETKPLAVCLGRVADVYRYC 130

Query: 144 VTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSET 203
               +P GLL  LLPGPVT+V++R E   L K LNP    +G+R+PD  F++ +++    
Sbjct: 131 HV-RVPEGLLKDLLPGPVTLVMERSEE--LNKDLNPFTPLVGIRIPDHAFMQDLAQMFGG 190

Query: 204 ALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTKRGTY 263
            LALTSANLS Q SS+ V +F++LW H + + DGG +     P  R GST++DL+  G +
Sbjct: 191 PLALTSANLSSQSSSLNVEEFQDLWPHLSLIIDGGPIGDGQSPECRLGSTVVDLSVPGKF 250

Query: 264 KILRAGSAKEQTVATLERYSLLEEAAS 286
            I+R G A E T A L+ Y LL    S
Sbjct: 251 GIIRPGCALESTSAILQEYGLLPSHGS 274

[Close]

BLAST of CcUC03G044390 vs. ExPASy Swiss-Prot
Match: Q86U90 (YrdC domain-containing protein, mitochondrial OS=Homo sapiens OX=9606 GN=YRDC PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.2e-43
Identity = 98/208 (47.12%), Postives = 133/208 (63.94%), Query Frame = 0


Query: 84  ATDALKAGKVIAVPTDTLYGLACDACSSGAVHRIYEIKGRKLTSPLAICVGDVSDITRFA 143
           A   L+AG V+AVPTDTLYGLAC A  S A+  +Y +KGR    PLA+C+G V+D+ R+ 
Sbjct: 73  AVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAVCLGRVADVYRYC 132

Query: 144 VTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSET 203
               +P GLL  LLPGPVT+V++R E   L K LNP    +G+R+PD  F++ +++  E 
Sbjct: 133 RV-RVPEGLLKDLLPGPVTLVMERSEE--LNKDLNPFTPLVGIRIPDHAFMQDLAQMFEG 192

Query: 204 ALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTKRGTY 263
            LALTSANLS Q SS+ V +F++LW   + V DGG +     P  R GST++DL+  G +
Sbjct: 193 PLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGDGQSPECRLGSTVVDLSVPGKF 252

Query: 264 KILRAGSAKEQTVATL-ERYSLLEEAAS 286
            I+R G A E T A L ++Y LL   AS
Sbjct: 253 GIIRPGCALESTTAILQQKYGLLPSHAS 277

[Close]

BLAST of CcUC03G044390 vs. ExPASy Swiss-Prot
Match: Q499R4 (YrdC domain-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Yrdc PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.7e-42
Identity = 103/245 (42.04%), Postives = 144/245 (58.78%), Query Frame = 0


Query: 47  GSRLSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLAC 106
           G+RL     + ++E  S       +ALR         A   L+AG V+AVPTDTLYGLAC
Sbjct: 45  GARLLRLPESEAVEAASPERSGWTEALR--------AAVAELRAGAVVAVPTDTLYGLAC 104

Query: 107 DACSSGAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLK 166
            A  S A+  +Y +KGR    PLA+C+G V+D+ R+     +P  LL+ L PGPVT+V++
Sbjct: 105 SASCSAALSCVYRLKGRSEAKPLAVCLGRVADVYRYCQV-RVPRELLEDLFPGPVTLVME 164

Query: 167 RGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFEN 226
           R E   L K LNP    +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++
Sbjct: 165 RSEE--LNKDLNPFTPLVGIRIPDHAFMLDLAQMFGGPLALTSANLSSQASSLSVEEFQD 224

Query: 227 LWQHCAYVYDGGVL-----PAGRAGSTIIDLTKRGTYKILRAGSAKEQTVATLE-RYSLL 286
           LW H + V DGG +     P  R GST++DL+  G + I+R+G A E T A L+ +Y LL
Sbjct: 225 LWPHLSLVIDGGPIGDSESPECRLGSTVVDLSVPGKFGIIRSGCALENTTAILQGKYGLL 278

[Close]

BLAST of CcUC03G044390 vs. ExPASy Swiss-Prot
Match: Q3U5F4 (YrdC domain-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Yrdc PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.0e-42
Identity = 95/208 (45.67%), Postives = 131/208 (62.98%), Query Frame = 0


Query: 84  ATDALKAGKVIAVPTDTLYGLACDACSSGAVHRIYEIKGRKLTSPLAICVGDVSDITRFA 143
           A   L+AG V+AVPTDTLYGLAC A SS A+  +Y +KGR    PLA+C+G V+D+ R+ 
Sbjct: 74  AVAELRAGAVVAVPTDTLYGLACSASSSAALSCVYRLKGRSEAKPLAVCLGRVADVYRYC 133

Query: 144 VTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSET 203
               +P  LL+ L PGPVT+V++R E   L K LNP    +G+R+PD  F+  +++    
Sbjct: 134 QV-RVPRELLEDLFPGPVTLVMERSEE--LNKDLNPFTRLVGIRIPDHAFMLDLAQMFGG 193

Query: 204 ALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTKRGTY 263
            LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST++DL+  G +
Sbjct: 194 PLALTSANLSSQASSLSVEEFQDLWPHLSLVIDGGPIGDSQSPECRLGSTVVDLSVPGKF 253

Query: 264 KILRAGSAKEQTVATL-ERYSLLEEAAS 286
            I+R G A E T + L ++Y LL    S
Sbjct: 254 GIIRPGCALENTTSILQQKYGLLPSQGS 278

[Close]

BLAST of CcUC03G044390 vs. ExPASy Swiss-Prot
Match: Q60369 (Putative threonylcarbamoyl-AMP synthase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0062 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.7e-21
Identity = 61/165 (36.97%), Postives = 95/165 (57.58%), Query Frame = 0


Query: 91  GKVIAVPTDTLYGLACDACSSGAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPS 150
           GK++   TDTLYG++ +A +  AV ++Y IK R+   PL+ICV D ++I ++A  + L  
Sbjct: 32  GKIVICGTDTLYGISANALNEKAVRKVYNIKRREFNKPLSICVRDKNEIEKYAYVNDLAK 91

Query: 151 GLLDSLLPGPVTVVLKR--GEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALT 210
            ++D  LPGP+T++LK+  G   I+ K      D IG+R+PD   IR +   S   L  T
Sbjct: 92  KIIDKFLPGPLTIILKKKPGIPDIVAK------DYIGIRIPDEPIIREL---SIVPLTTT 151

Query: 211 SANLSGQPSSVCVNDFE-NLWQHCAYVYDGGVLPAGRAGSTIIDL 253
           SAN+SG+ S   V++ +  + +   YV D G     +  STII +
Sbjct: 152 SANISGKESPTTVDEIDKEVLKKVDYVIDIGKCKYSKP-STIIKI 186

[Close]

BLAST of CcUC03G044390 vs. ExPASy TrEMBL
Match: A0A0A0LUP4 (YrdC-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G077210 PE=3 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 7.1e-140
Identity = 255/286 (89.16%), Postives = 271/286 (94.76%), Query Frame = 0


Query: 1   MNTLPAKMVESLSLIRTFATFPSSHRDFYVLGSPNYGLLSFFQQNRGSRLSFPKTTWSLE 60
           MNTLPAKM +SLSLIRTF TFPSS      LGS NYG++SF Q+NRGSR+SF KT WSLE
Sbjct: 1   MNTLPAKMADSLSLIRTFTTFPSSQ-----LGSSNYGIVSFLQRNRGSRVSFLKTNWSLE 60

Query: 61  KCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSGAVHRIYEI 120
           KC MRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACS+ AVHRIYEI
Sbjct: 61  KCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEI 120

Query: 121 KGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPG 180
           KGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGE+S+L+KSLNPG
Sbjct: 121 KGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPG 180

Query: 181 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240
           LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL
Sbjct: 181 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240

Query: 241 PAGRAGSTIIDLTKRGTYKILRAGSAKEQTVATLERYSLLEEAASI 287
           PAGRAGSTIIDLT++GT+KI+RAGSA+EQT+ATLERYSLLE AA+I
Sbjct: 241 PAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI 281

[Close]

BLAST of CcUC03G044390 vs. ExPASy TrEMBL
Match: A0A5A7T5W1 (YrdC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00620 PE=3 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.3e-138
Identity = 251/286 (87.76%), Postives = 271/286 (94.76%), Query Frame = 0


Query: 1   MNTLPAKMVESLSLIRTFATFPSSHRDFYVLGSPNYGLLSFFQQNRGSRLSFPKTTWSLE 60
           MNTLPAKM +SLSLIRTFATFPSSH     LGS NYG++SF Q+NRGSR+SF KT WSLE
Sbjct: 1   MNTLPAKMADSLSLIRTFATFPSSH-----LGSSNYGIVSFLQRNRGSRVSFLKTDWSLE 60

Query: 61  KCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSGAVHRIYEI 120
           KC M VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACS+ AVHRIYEI
Sbjct: 61  KCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEI 120

Query: 121 KGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPG 180
           KGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGE+S+L+KSLNPG
Sbjct: 121 KGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPG 180

Query: 181 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240
           LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL
Sbjct: 181 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240

Query: 241 PAGRAGSTIIDLTKRGTYKILRAGSAKEQTVATLERYSLLEEAASI 287
           PAGRAGSTI+DLT+RGT+KI+RAGSA++QT+ATL+RYSLLE AA+I
Sbjct: 241 PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI 281

[Close]

BLAST of CcUC03G044390 vs. ExPASy TrEMBL
Match: A0A1S3CNI2 (yrdC domain-containing protein, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502936 PE=3 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.3e-138
Identity = 251/286 (87.76%), Postives = 271/286 (94.76%), Query Frame = 0


Query: 1   MNTLPAKMVESLSLIRTFATFPSSHRDFYVLGSPNYGLLSFFQQNRGSRLSFPKTTWSLE 60
           MNTLPAKM +SLSLIRTFATFPSSH     LGS NYG++SF Q+NRGSR+SF KT WSLE
Sbjct: 1   MNTLPAKMADSLSLIRTFATFPSSH-----LGSSNYGIVSFLQRNRGSRVSFLKTDWSLE 60

Query: 61  KCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSGAVHRIYEI 120
           KC M VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACS+ AVHRIYEI
Sbjct: 61  KCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEI 120

Query: 121 KGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPG 180
           KGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGE+S+L+KSLNPG
Sbjct: 121 KGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPG 180

Query: 181 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240
           LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL
Sbjct: 181 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240

Query: 241 PAGRAGSTIIDLTKRGTYKILRAGSAKEQTVATLERYSLLEEAASI 287
           PAGRAGSTI+DLT+RGT+KI+RAGSA++QT+ATL+RYSLLE AA+I
Sbjct: 241 PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI 281

[Close]

BLAST of CcUC03G044390 vs. ExPASy TrEMBL
Match: A0A6J1KDV4 (yrdC domain-containing protein, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111492950 PE=3 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 8.7e-138
Identity = 255/285 (89.47%), Postives = 265/285 (92.98%), Query Frame = 0


Query: 1   MNTLPAKMVESLSLIRTFATFPSSHRDFYVLGSPNYGLLSFFQQNRGSRLSFPKTTWSLE 60
           MNT PAKMVE LSLIRTFATFPSS      LG+PNYG +SF   NRGSRL+FPKT WSLE
Sbjct: 6   MNTFPAKMVEGLSLIRTFATFPSSQ-----LGAPNYGFVSFLHHNRGSRLNFPKTAWSLE 65

Query: 61  KCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSGAVHRIYEI 120
           KCSMRVEN LQALRPASEAFAQEAT+ALKAGKVIAVPTDTLYGLACDACSS AV+RIYEI
Sbjct: 66  KCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEI 125

Query: 121 KGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPG 180
           KGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGE+SILEKSLNPG
Sbjct: 126 KGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKRGESSILEKSLNPG 185

Query: 181 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240
           L+SIGVRVPDADFIRLISRRS TALALTSANLSG+PSSVCVNDFENLWQHCAYVYDGGVL
Sbjct: 186 LESIGVRVPDADFIRLISRRSGTALALTSANLSGRPSSVCVNDFENLWQHCAYVYDGGVL 245

Query: 241 PAGRAGSTIIDLTKRGTYKILRAGSAKEQTVATLERYSLLEEAAS 286
           PAGRAGSTIIDLTKRG +KI+RAGSAKEQTVATLERYSLLEEA S
Sbjct: 246 PAGRAGSTIIDLTKRGMFKIIRAGSAKEQTVATLERYSLLEEADS 285

[Close]

BLAST of CcUC03G044390 vs. ExPASy TrEMBL
Match: A0A6J1G9Z7 (yrdC domain-containing protein, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111452294 PE=3 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.3e-137
Identity = 253/285 (88.77%), Postives = 266/285 (93.33%), Query Frame = 0


Query: 1   MNTLPAKMVESLSLIRTFATFPSSHRDFYVLGSPNYGLLSFFQQNRGSRLSFPKTTWSLE 60
           MNTLPAKMVE LS+IRTFATFPSS      LG+P+YG +SF   NRGSRL+FPKT WSLE
Sbjct: 6   MNTLPAKMVEGLSIIRTFATFPSSQ-----LGAPSYGFVSFLHHNRGSRLNFPKTVWSLE 65

Query: 61  KCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSGAVHRIYEI 120
           KCSMRVEN LQALRPASEAFAQEA +ALKAGKVIAVPTDTLYGLACDACSS AV+RIYEI
Sbjct: 66  KCSMRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEI 125

Query: 121 KGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPG 180
           KGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGE+SILEKSLNPG
Sbjct: 126 KGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKRGESSILEKSLNPG 185

Query: 181 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240
           L+SIGVRVPDADFIRLISRRS TALALTSANLSGQPSSVCV+DFENLWQHCAYVYDGG+L
Sbjct: 186 LESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGIL 245

Query: 241 PAGRAGSTIIDLTKRGTYKILRAGSAKEQTVATLERYSLLEEAAS 286
           PAGRAGSTIIDLTKRGT+KI+RAGSAKEQTVATLERYSLLEEA S
Sbjct: 246 PAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEADS 285

[Close]

BLAST of CcUC03G044390 vs. TAIR 10
Match: AT5G60590.2 (DHBP synthase RibB-like alpha/beta domain )

HSP 1 Score: 332.4 bits (851), Expect = 3.6e-91
Identity = 172/248 (69.35%), Postives = 196/248 (79.03%), Query Frame = 0


Query: 38  LLSFFQQNRGSRLSF---PKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVI 97
           L  F   N+  RL +    K  WSLE+    V +    + PA+EA+AQEA +A+K+ KVI
Sbjct: 30  LRCFSIANQSRRLRWGLQKKMVWSLERAETCVVSKSCLVHPATEAYAQEAIEAIKSEKVI 89

Query: 98  AVPTDTLYGLACDACSSGAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLD 157
           AVPTDTLYG ACDACS  AV RIYEIKGRKLTSPLAICVGDV DI R A T HLP GLLD
Sbjct: 90  AVPTDTLYGFACDACSLEAVSRIYEIKGRKLTSPLAICVGDVLDIKRVATTSHLPHGLLD 149

Query: 158 SLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSG 217
           SLLPGPVT+VL+RGE+SILEKSLNPG+ +IGVRVPD +FIR +SR S + LALTSANLSG
Sbjct: 150 SLLPGPVTLVLQRGESSILEKSLNPGIGTIGVRVPDCEFIREVSRGSGSVLALTSANLSG 209

Query: 218 QPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTKRGTYKILRAGSAKEQTVATL 277
             SSVCV DFENLWQHCAYVYDGG+LP+GRAGSTI+DLTK G YKI+R GSAK+ TVA L
Sbjct: 210 DRSSVCVKDFENLWQHCAYVYDGGLLPSGRAGSTIVDLTKVGKYKIIRPGSAKQATVAIL 269

Query: 278 ERYSLLEE 283
           E+Y L EE
Sbjct: 270 EKYLLEEE 277

[Close]

BLAST of CcUC03G044390 vs. TAIR 10
Match: AT5G60590.1 (DHBP synthase RibB-like alpha/beta domain )

HSP 1 Score: 158.3 bits (399), Expect = 9.2e-39
Identity = 85/133 (63.91%), Postives = 97/133 (72.93%), Query Frame = 0


Query: 38  LLSFFQQNRGSRLSF---PKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVI 97
           L  F   N+  RL +    K  WSLE+    V +    + PA+EA+AQEA +A+K+ KVI
Sbjct: 30  LRCFSIANQSRRLRWGLQKKMVWSLERAETCVVSKSCLVHPATEAYAQEAIEAIKSEKVI 89

Query: 98  AVPTDTLYGLACDACSSGAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLD 157
           AVPTDTLYG ACDACS  AV RIYEIKGRKLTSPLAICVGDV DI R A T HLP GLLD
Sbjct: 90  AVPTDTLYGFACDACSLEAVSRIYEIKGRKLTSPLAICVGDVLDIKRVATTSHLPHGLLD 149

Query: 158 SLLPGPVTVVLKR 168
           SLLPGPVT+VL+R
Sbjct: 150 SLLPGPVTLVLQR 162

[Close]

BLAST of CcUC03G044390 vs. TAIR 10
Match: AT3G01920.1 (DHBP synthase RibB-like alpha/beta domain )

HSP 1 Score: 66.6 bits (161), Expect = 3.6e-11
Identity = 61/207 (29.47%), Postives = 94/207 (45.41%), Query Frame = 0


Query: 82  QEATDALKAGKVIAVPTDTLYGLACDACSSGAVHRIYEIKGRKLTSPLAICVGDVSDITR 141
           Q   D LK G V  +PTDT+Y +ACD  +  AV R+  IK  + + PL+I    + DI  
Sbjct: 84  QPVIDLLKQGAVGVIPTDTVYAIACDCKNHSAVERLRRIKKIESSKPLSILCRSLRDIDT 143

Query: 142 FAVTDHLPSG----------LLDSLLPGPVTVVLKRGEASILEKSLNPGLDS-------- 201
           F  T   P G           +   LPGP T +L   +  + ++ +  G  S        
Sbjct: 144 F--TMGFPRGDGHGHANVFRAVKQCLPGPYTFILTASK-ELPKQCVGYGTTSVKYASRKN 203

Query: 202 IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLW-----QHCAYVYDGG 261
           +GVR+ D    + I ++ +  L  TS  + G   +  + D   +      +   +V DGG
Sbjct: 204 VGVRISDDALCQAILQQMDAPLICTS--VKGPKENEWMIDPTAIGDIYGPEGLDFVVDGG 263

Query: 262 VLPAGRAGSTIIDLTKRGTY-KILRAG 265
           +  A    STI+D+T  G Y K++R G
Sbjct: 264 IRVA--EPSTIVDMT--GPYPKVIREG 281

The following BLAST results are available for this feature:

BLAST of CcUC03G044390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893581.1	3.3e-147	95.10	yrdC domain-containing protein, mitochondrial isoform X1 [Benincasa hispida]	[more]
XP_004148791.1	1.5e-139	89.16	yrdC domain-containing protein, mitochondrial isoform X1 [Cucumis sativus]	[more]
XP_023521571.1	2.8e-138	89.82	yrdC domain-containing protein, mitochondrial-like [Cucurbita pepo subsp. pepo] ...	[more]
XP_008465284.1	2.8e-138	87.76	PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis melo] >KAA0036...	[more]
XP_022998259.1	1.8e-137	89.47	yrdC domain-containing protein, mitochondrial [Cucurbita maxima]	[more]

BLAST of CcUC03G044390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0VC80	1.4e-44	46.86	YrdC domain-containing protein, mitochondrial OS=Bos taurus OX=9913 GN=YRDC PE=2...	[more]
Q86U90	1.2e-43	47.12	YrdC domain-containing protein, mitochondrial OS=Homo sapiens OX=9606 GN=YRDC PE...	[more]
Q499R4	1.7e-42	42.04	YrdC domain-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Y...	[more]
Q3U5F4	3.0e-42	45.67	YrdC domain-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Yrdc P...	[more]
Q60369	1.7e-21	36.97	Putative threonylcarbamoyl-AMP synthase OS=Methanocaldococcus jannaschii (strain...	[more]

BLAST of CcUC03G044390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUP4	7.1e-140	89.16	YrdC-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G077210 P...	[more]
A0A5A7T5W1	1.3e-138	87.76	YrdC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3CNI2	1.3e-138	87.76	yrdC domain-containing protein, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A6J1KDV4	8.7e-138	89.47	yrdC domain-containing protein, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1G9Z7	3.3e-137	88.77	yrdC domain-containing protein, mitochondrial OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of CcUC03G044390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60590.2	3.6e-91	69.35	DHBP synthase RibB-like alpha/beta domain	[more]
AT5G60590.1	9.2e-39	63.91	DHBP synthase RibB-like alpha/beta domain	[more]
AT3G01920.1	3.6e-11	29.47	DHBP synthase RibB-like alpha/beta domain	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.870.10	DHBP synthase	coord: 71..275 e-value: 2.0E-57 score: 195.5
None	No IPR available	PANTHER	PTHR17490:SF10	YRDC DOMAIN-CONTAINING PROTEIN, MITOCHONDRIAL	coord: 44..283
None	No IPR available	PANTHER	PTHR17490	SUA5	coord: 44..283
IPR006070	YrdC-like domain	TIGRFAM	TIGR00057	TIGR00057	coord: 80..270 e-value: 3.7E-42 score: 141.8
IPR006070	YrdC-like domain	PFAM	PF01300	Sua5_yciO_yrdC	coord: 87..264 e-value: 7.1E-46 score: 155.9
IPR006070	YrdC-like domain	PROSITE	PS51163	YRDC	coord: 78..266 score: 25.745005
IPR017945	DHBP synthase RibB-like alpha/beta domain superfamily	SUPERFAMILY	55821	YrdC/RibB	coord: 79..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC03G044390.1	CcUC03G044390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006450	regulation of translational fidelity
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005666	RNA polymerase III complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0003725	double-stranded RNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000049	tRNA binding