CcUC03G042480 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGATCGAGTCCACTATTTTCTACGCATATGGTTGCCACATTGCTCTCTCGTCAACGCTTCTCTACTACATGCACAAGAAAGGTTTATTCGTGGATGGAGTTCACAAGTTTCACGTTACTCTGGACCAGACTCACGAGTCATGTGTTATGGGGCCAGCTGACATGAACCAAAGTTTGGCTAACGTTAAAAACTTGAGGACCTTATACACGATTTGCTTATCCGTTTTTGTCAATACTATCCAACTACACCCTAAATGGGACATTTGTTTTTGTAGTTACATTATTTTTTTAAAAAAAATTTTTTCTCACCACACTATTTTTGTTATTTTTAGATAAATTTATTATTAGAGAATTTAGTCTCAATATTAAATAAGTTTCAAAGCAGGGAGACTAAAATGATACTTTTTACAACGAATATTACATCCCATATACATAAATTATTTTGTATGGAATATAATATTTTGACGACATAGTCTAAAAGAAAGTTTTAATATACATGGGTTAAAATTTTAATTATATTTTACAAATGTCCTTTGTGTTGTACTTGTAGCGAAATTCTTGGCTACAAATGCTTAGATCTGCAGTCCAACAGTATATATAAAGGATCGCCCATCACCCATAGGCCTACAAAACCCCAACATTTCTCAACTCCGTCATTATTTATTTAACTAACTGCCCCTCCGGCAGCTGCTCGTCGGAATTACGAAACTGGCAAACTCAGAGTGGTCGTCGGAGCAAAGGGAGAGCGTTGGGAGAGTGAGAGCCCTTTACGAGGCATTGGGTTCCAAAGACGTGGAGACGGTGCACCGCCTTCTGGCCCCGGACCTGGAGTGGTGGTTCCATGGTCCTCCGTCGCACCAGTACTTGATGCGCCTCCTCACCGGCGCCTCCTCCTCCTTTGTCTTCGCACCAATCTCTGTCGTCCCATTTGGGCCCAATTTCGTCCTGGCGGAAGGCTACAACACAAAACGCGCCGTTTCCTGGGTCCACGCCTGGACCATTACTGATGGGATCATCACCCACGTCAAGGAATATCTCAACACCTCTGTTACTGTCAAGTGCTTCTCCTCCGCCGCCGACGGGGACTCGCCTTCCGCATCTCCACCGCCTAACTGCCAGAGTGTGTGGCAGAGCAAGGTCTGGGGAGAATCTGTGGTGCCTGCTCTTGTTTTGGCTCTTTAG ATGTGGATCGAGTCCACTATTTTCTACGCATATGGTTGCCACATTGCTCTCTCGTCAACGCTTCTCTACTACATGCACAAGAAAGGTTTATTCGTGGATGGAGTTCACAAGTTTCACCTGCTCGTCGGAATTACGAAACTGGCAAACTCAGAGTGGTCGTCGGAGCAAAGGGAGAGCGTTGGGAGAGTGAGAGCCCTTTACGAGGCATTGGGTTCCAAAGACGTGGAGACGGTGCACCGCCTTCTGGCCCCGGACCTGGAGTGGTGGTTCCATGGTCCTCCGTCGCACCAGTACTTGATGCGCCTCCTCACCGGCGCCTCCTCCTCCTTTGTCTTCGCACCAATCTCTGTCGTCCCATTTGGGCCCAATTTCGTCCTGGCGGAAGGCTACAACACAAAACGCGCCGTTTCCTGGGTCCACGCCTGGACCATTACTGATGGGATCATCACCCACGTCAAGGAATATCTCAACACCTCTGTTACTGTCAAGTGCTTCTCCTCCGCCGCCGACGGGGACTCGCCTTCCGCATCTCCACCGCCTAACTGCCAGAGTGTGTGGCAGAGCAAGGTCTGGGGAGAATCTGTGGTGCCTGCTCTTGTTTTGGCTCTTTAG ATGTGGATCGAGTCCACTATTTTCTACGCATATGGTTGCCACATTGCTCTCTCGTCAACGCTTCTCTACTACATGCACAAGAAAGGTTTATTCGTGGATGGAGTTCACAAGTTTCACCTGCTCGTCGGAATTACGAAACTGGCAAACTCAGAGTGGTCGTCGGAGCAAAGGGAGAGCGTTGGGAGAGTGAGAGCCCTTTACGAGGCATTGGGTTCCAAAGACGTGGAGACGGTGCACCGCCTTCTGGCCCCGGACCTGGAGTGGTGGTTCCATGGTCCTCCGTCGCACCAGTACTTGATGCGCCTCCTCACCGGCGCCTCCTCCTCCTTTGTCTTCGCACCAATCTCTGTCGTCCCATTTGGGCCCAATTTCGTCCTGGCGGAAGGCTACAACACAAAACGCGCCGTTTCCTGGGTCCACGCCTGGACCATTACTGATGGGATCATCACCCACGTCAAGGAATATCTCAACACCTCTGTTACTGTCAAGTGCTTCTCCTCCGCCGCCGACGGGGACTCGCCTTCCGCATCTCCACCGCCTAACTGCCAGAGTGTGTGGCAGAGCAAGGTCTGGGGAGAATCTGTGGTGCCTGCTCTTGTTTTGGCTCTTTAG MWIESTIFYAYGCHIALSSTLLYYMHKKGLFVDGVHKFHLLVGITKLANSEWSSEQRESVGRVRALYEALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASSSFVFAPISVVPFGPNFVLAEGYNTKRAVSWVHAWTITDGIITHVKEYLNTSVTVKCFSSAADGDSPSASPPPNCQSVWQSKVWGESVVPALVLAL Homology
BLAST of CcUC03G042480 vs. NCBI nr
Match: KAA0059984.1 (putative Senescence associated protein 20 [Cucumis melo var. makuwa] >TYJ97243.1 putative Senescence associated protein 20 [Cucumis melo var. makuwa]) HSP 1 Score: 291.2 bits (744), Expect = 6.9e-75 Identity = 143/163 (87.73%), Postives = 151/163 (92.64%), Query Frame = 0
BLAST of CcUC03G042480 vs. NCBI nr
Match: KAG6607351.1 (Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 257.7 bits (657), Expect = 8.5e-65 Identity = 139/179 (77.65%), Postives = 149/179 (83.24%), Query Frame = 0
BLAST of CcUC03G042480 vs. NCBI nr
Match: KAG7037026.1 (Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 255.0 bits (650), Expect = 5.5e-64 Identity = 138/174 (79.31%), Postives = 146/174 (83.91%), Query Frame = 0
BLAST of CcUC03G042480 vs. NCBI nr
Match: XP_017982445.1 (PREDICTED: uncharacterized protein LOC18591051 [Theobroma cacao]) HSP 1 Score: 190.7 bits (483), Expect = 1.3e-44 Identity = 95/160 (59.38%), Postives = 117/160 (73.12%), Query Frame = 0
BLAST of CcUC03G042480 vs. NCBI nr
Match: XP_038893485.1 (senescence associated gene 20-like [Benincasa hispida]) HSP 1 Score: 190.7 bits (483), Expect = 1.3e-44 Identity = 94/106 (88.68%), Postives = 98/106 (92.45%), Query Frame = 0
BLAST of CcUC03G042480 vs. ExPASy Swiss-Prot
Match: Q94AK6 (Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.5e-19 Identity = 54/111 (48.65%), Postives = 74/111 (66.67%), Query Frame = 0
BLAST of CcUC03G042480 vs. ExPASy Swiss-Prot
Match: P20144 (Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13 Identity = 49/111 (44.14%), Postives = 70/111 (63.06%), Query Frame = 0
BLAST of CcUC03G042480 vs. ExPASy TrEMBL
Match: A0A5A7UY51 (Putative Senescence associated protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00340 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 3.4e-75 Identity = 143/163 (87.73%), Postives = 151/163 (92.64%), Query Frame = 0
BLAST of CcUC03G042480 vs. ExPASy TrEMBL
Match: A0A061GYQ0 (Senescence associated gene 20, putative OS=Theobroma cacao OX=3641 GN=TCM_042245 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 6.2e-45 Identity = 95/160 (59.38%), Postives = 117/160 (73.12%), Query Frame = 0
BLAST of CcUC03G042480 vs. ExPASy TrEMBL
Match: A0A1U7ZU64 (uncharacterized protein LOC104597350 OS=Nelumbo nucifera OX=4432 GN=LOC104597350 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 3.7e-42 Identity = 96/165 (58.18%), Postives = 119/165 (72.12%), Query Frame = 0
BLAST of CcUC03G042480 vs. ExPASy TrEMBL
Match: A0A1R3K5H8 (Wound-induced protein, Wun1 OS=Corchorus olitorius OX=93759 GN=COLO4_11170 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 8.3e-42 Identity = 93/157 (59.24%), Postives = 113/157 (71.97%), Query Frame = 0
BLAST of CcUC03G042480 vs. ExPASy TrEMBL
Match: A0A2N9EI45 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2202 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 3.2e-41 Identity = 99/172 (57.56%), Postives = 120/172 (69.77%), Query Frame = 0
BLAST of CcUC03G042480 vs. TAIR 10
Match: AT5G01740.1 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 103.2 bits (256), Expect = 2.5e-22 Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 0
BLAST of CcUC03G042480 vs. TAIR 10
Match: AT3G10985.1 (senescence associated gene 20 ) HSP 1 Score: 97.1 bits (240), Expect = 1.8e-20 Identity = 54/111 (48.65%), Postives = 74/111 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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