CcUC02G041620 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G041620
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Mitochondrial distribution and morphology protein 34
Location	CicolChr02: 36699766 .. 36702973 (-)
RNA-Seq Expression	CcUC02G041620
Synteny	CcUC02G041620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGTCGATTCAAAAGTTAAAGTTGCACTATAGTTATTAGAAACATAGAGATATATATATATATATATTATTTGTTGCAGCCAAGGACATAGAGAAGACAAGTTAGAGAGGAAATTGAAGTGGGAAAGAATGGCGAGATACAACAACTACTACTACTACAACAGGTACCCTTACTTGGAGTACTTGACATTGCCTCCTTTGCAGCTTTGTGTGTTTGGTATGATCCTTCTGCTGGTGATGGCCTTTTCATGGTACATTTTCTATGACTCCTTTCTTGAGGATTTCATCTTCCAACTCAAGCTCTTCCTCCTCACTGTCCCCTTGCTTCTCCTCCTCCTCCTACACATTCTCTCCTTCGGCCTCCCCTTTCTCGTCCCCTTGCCCCAGCAGGACTACCTCCACCGTGCCGGTGGCTCACCCTGGGGCGTCGCCCTCCTCCTCGTCTTCCTTCTCTATGTCATCTCTCACCAGTCTCACTACCACCAACGTTGGTTCCCTTTCGGGTATAGATAATCGTTATTTTTCCAACTGCTTGTATTAACTACTTGAATTATGCTTAAGTTTTGGTTTTGTGGAGTATTGCTATTTTGTGTATTATTTATGTCACTGGAATTGTTGTATTACAATAATGACTTTGTCGTCTACATCTATTGCAAGTTTGCTTTTGTGAATTATGATAGAGATTTATTATGGTTTTGTTTCATAATCATTTCATTTTTAAAAATTAAGTCTGGTTCCTCTTAATTTCTTACAATGGTTTTCATTTTTCTTAACTAAAAGAATTGAATTATTCTTAGCCATAATTCCTAAAACAAAAATAATTTTTAGAAACTACTTTTCTTAGTTCTCAAAATTTAATTTATAAGTCTTTGAAAACATTGGAACAAAGTAGATAACAAAATAAGTAATGTGGTGCATGTTTTAGGAGTGATTTTGAAGTTGTTAAAAATCAGTTTTATTATAATCAAAATCATTCCGAAACACTCTTTTAATCAATAGATAAATATTTGATTTTACACCTTTAAATGCAATTTTTATATCATCAAAATTGGTTTTGAGTGATTAAAATTATGTTTCAAATTAATTTTCAAAATGACAAAAGTGATTTTATCCATTTTAAAATCACTCTCCAAATTAGCCTTAAACATGAGAGGAGTGTTTAGAAGTTTCATTTTCGTAAAATTAAAAAACTAAAAATCAAATGGTTACTAAGCAGAGCCTTAAGTTTTGGTTCTTAATTTTTGAAAACTAAGCTTACAAATATTAATAACATTCGTAAGTTTGAATGGTTTGAGAGTAAGTCAATTTGTAAAATAAAAAAAAAAAATATATATATATATATATATATTAATTTTGTTTTTAGAATTTAATTAAGAAAACAATAGTTGATTAAACAAGGATTTAATCATAATTAGAAAATGGAAAGGAAAGAAACAGACATCGTAAAAACAAATTAAACATACAAATCCATAGATAAAAAGTGAAGAAGAAAATGATGGCCATTGAGCCTAAATGCGAAATGGTTATGAAGAGTAAAATGTAATATTAAAATTAACAAATAATAATCATTGAGGGAAACGCAAAATTGGAATATTTATCGTTGTGTATAAAGTTAATTTAAAGTAGGTTGGATTCTTTAGGTTTGAGTGATGGTTTGTGTATGGATGCTTGGTGTCCCAATCACATTTGTGCTCACACAACCAAACAAATATTTCAGAAAAAAGAATCACATTTTCAATTTCCTCTCTCCCTCTCTGTCTCTACACACCGTCACCCTCTCAGTTTATTTCTTTATATAATATTTTCTCAGAAGGAAAAATAATAACTAACATCAACCTTATTTATTGCTGATCTGACCCTACAAAATTATAGTTAAATTATAAATTTGTCCTGGTTGCCACGTGGTAATGAGTTTTCCTTTTCCAAAAATAAAAACAAAATAAAAACTATAAATTATAAATTTACTCCTACAAAGTTAGAATTTAGTTTATGTGATTTGTAATTAGAATTTAGTCTCTATGGTCCCGCAAAACATTTGCAAATGCATATTTTATCTAATTATAGAAACTGTTTGTGAGAACTCATCAAGTTAGATGGACAATAATTCTAATTTTTAAAATTATAGGGACTAATCTCTAACTTTCTCCAAACCATGGGGACTACTTTTTTAAATTTAACTATATCAAATTTATGCCCCTAAATTTTGGAGTTGTATCGATTAAAACTCCAAATTGGTAATTTGTAATAATTTAAATCTTGAATTTGATGAGTCTAAGACTCCTAATATTGATATGGTCTATCACTTATATACCCTTAATATTGATATAGTAAAATGGATAGATTTCAAAATCAAAATCAAAATTTTGTTATATCTGTAAATATTGTGCTATATCTACAAATACTTTGGATTTGATTGCTATATTTGCAACTGTTCCTTCTTTTTACGACAAGAATTTAACTTGATACAACCATCCATTGAAATTTGGCTATAAATTGATATTTAAAAAAAAAAAAAAGGAAAGAAAAAAAACGCACATATAATAACACTAGATATAGTTTAAAGATTTGACGATAGAGGATTATTTAGAAATGCACTCATTTTTATGCGTCCGAGTAGTCTGTACATGCGAAGAAAAATGAATTAGAAATATTTTGAAAAGAATTAAGGTGAAAATAAATTATGATGAAACAGTTAAATAATTTTCAGCCTAATAGGCTCCTTCCTTCTGTTGTAGTCTGGGAAGGGGAACAAAACTCCAAATTTGAGATCAAAGAAGCTTTCAAAACTTGAAGGAGTGAGAATGAAAGCTTCAGAGCTTTCAACTCCAACGAATGCCGTAGAATGCAAGGACAGGCCCCAAAAACCGCCCTTCAGGCCTGCTAAAGACGACACCAAGCTCCTTCTTCAAGATCCGGTTCTCTCTCGCCCAAATTAACTCTTACCACTAATTCCTTCCTTCTACTTTCATTCTTGAATTTTGTTGTACCAATGTGCACCTACTGAAGATTGTTCCCATTTCTTTCTTTTGCTATAGATACGGAGGTCAGATCCAATTGACACTGAGGAAGCCGTGCTCCGACCACCTCCCTTCCATTTCTCTGTTCCGAAATCAAAGAACCCTTCTCAAATGGGGTGAAAGAAAAACTTTAGATTTCTTATTTTCATGTTATGTCTGTTCTTGTTGTTCCATTCCATGAATGATCGCGT

mRNA sequence

TTGGTCGATTCAAAAGTTAAAGTTGCACTATAGTTATTAGAAACATAGAGATATATATATATATATATTATTTGTTGCAGCCAAGGACATAGAGAAGACAAGTTAGAGAGGAAATTGAAGTGGGAAAGAATGGCGAGATACAACAACTACTACTACTACAACAGGTACCCTTACTTGGAGTACTTGACATTGCCTCCTTTGCAGCTTTGTGTGTTTGGTATGATCCTTCTGCTGGTGATGGCCTTTTCATGGTACATTTTCTATGACTCCTTTCTTGAGGATTTCATCTTCCAACTCAAGCTCTTCCTCCTCACTGTCCCCTTGCTTCTCCTCCTCCTCCTACACATTCTCTCCTTCGGCCTCCCCTTTCTCGTCCCCTTGCCCCAGCAGGACTACCTCCACCGTGCCGGTGGCTCACCCTGGGGCGTCGCCCTCCTCCTCGTCTTCCTTCTCTATGTCATCTCTCACCAGTCTCACTACCACCAACGTTGGTTCCCTTTCGGTCTGGGAAGGGGAACAAAACTCCAAATTTGAGATCAAAGAAGCTTTCAAAACTTGAAGGAGTGAGAATGAAAGCTTCAGAGCTTTCAACTCCAACGAATGCCGTAGAATGCAAGGACAGGCCCCAAAAACCGCCCTTCAGGCCTGCTAAAGACGACACCAAGCTCCTTCTTCAAGATCCGATACGGAGGTCAGATCCAATTGACACTGAGGAAGCCGTGCTCCGACCACCTCCCTTCCATTTCTCTGTTCCGAAATCAAAGAACCCTTCTCAAATGGGGTGAAAGAAAAACTTTAGATTTCTTATTTTCATGTTATGTCTGTTCTTGTTGTTCCATTCCATGAATGATCGCGT

Coding sequence (CDS)

ATGAAAGCTTCAGAGCTTTCAACTCCAACGAATGCCGTAGAATGCAAGGACAGGCCCCAAAAACCGCCCTTCAGGCCTGCTAAAGACGACACCAAGCTCCTTCTTCAAGATCCGATACGGAGGTCAGATCCAATTGACACTGAGGAAGCCGTGCTCCGACCACCTCCCTTCCATTTCTCTGTTCCGAAATCAAAGAACCCTTCTCAAATGGGGTGA

Protein sequence

MKASELSTPTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPFHFSVPKSKNPSQMG

Homology

[Close]

BLAST of CcUC02G041620 vs. NCBI nr
Match: KGN54090.1 (hypothetical protein Csa_017904 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 3.4e-29
Identity = 65/71 (91.55%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 1  MKASELSTPTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPFHFS 60
          MKASELS+P+N VECK+RPQKPPFRPAKDDTKLLLQDPIRRSDPI+TEEAVLRPPPFHFS
Sbjct: 1  MKASELSSPSNTVECKERPQKPPFRPAKDDTKLLLQDPIRRSDPIETEEAVLRPPPFHFS 60

Query: 61 VPKSKNPSQMG 72
          +PKSKNPSQMG
Sbjct: 61 LPKSKNPSQMG 71

[Close]

BLAST of CcUC02G041620 vs. NCBI nr
Match: KAG7035826.1 (hypothetical protein SDJN02_02625 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 122.1 bits (305), Expect = 1.9e-24
Identity = 61/74 (82.43%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 1  MKASELSTPTN---AVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPF 60
          M+ASELSTPTN    VECKDRP+KPPFRPAKDDTKL+LQDPIRRSDPI+TEEAVLRPPPF
Sbjct: 1  MRASELSTPTNPTTTVECKDRPRKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 60

Query: 61 HFSVPKSKNPSQMG 72
           FSV +SKN S+MG
Sbjct: 61 QFSVSESKNSSKMG 74

[Close]

BLAST of CcUC02G041620 vs. NCBI nr
Match: KAG6605875.1 (hypothetical protein SDJN03_03192, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 121.7 bits (304), Expect = 2.5e-24
Identity = 61/74 (82.43%), Postives = 66/74 (89.19%), Query Frame = 0


Query: 1  MKASELSTPTN---AVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPF 60
          M+ASELSTPTN    VECKDRP KPPFRPAKDDTKL+LQDPIRRSDPI+TEEAVLRPPPF
Sbjct: 1  MRASELSTPTNPTTTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 60

Query: 61 HFSVPKSKNPSQMG 72
           FSV +SKN S+MG
Sbjct: 61 QFSVSESKNSSKMG 74

[Close]

BLAST of CcUC02G041620 vs. NCBI nr
Match: XP_022995760.1 (uncharacterized protein LOC111491196 [Cucurbita maxima])

HSP 1 Score: 120.9 bits (302), Expect = 4.3e-24
Identity = 61/74 (82.43%), Postives = 65/74 (87.84%), Query Frame = 0


Query: 1  MKASELST---PTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPF 60
          M+ SELST   PTNA ECKDRP KPPFRPAKDDTKL+LQDPIRRSDPI+TEEAVLRPPPF
Sbjct: 11 MRTSELSTPTNPTNAAECKDRPLKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 70

Query: 61 HFSVPKSKNPSQMG 72
           FSV KSKN S+MG
Sbjct: 71 QFSVSKSKNSSKMG 84

[Close]

BLAST of CcUC02G041620 vs. NCBI nr
Match: XP_010257524.1 (PREDICTED: uncharacterized protein LOC104597593 [Nelumbo nucifera] >DAD42157.1 TPA_asm: hypothetical protein HUJ06_000387 [Nelumbo nucifera])

HSP 1 Score: 76.3 bits (186), Expect = 1.2e-10
Identity = 41/62 (66.13%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 1  MKASELSTPTNAVE-----CKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPP 58
          MK SE+   T+  E       D+PQKPPFRPAKDDTK +LQDPI RSDPI+TEEAVLR P
Sbjct: 1  MKGSEILIKTSESEGETKSFSDKPQKPPFRPAKDDTKPILQDPILRSDPIETEEAVLRLP 60

[Close]

BLAST of CcUC02G041620 vs. ExPASy TrEMBL
Match: A0A0A0KWV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280670 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-29
Identity = 65/71 (91.55%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 1  MKASELSTPTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPFHFS 60
          MKASELS+P+N VECK+RPQKPPFRPAKDDTKLLLQDPIRRSDPI+TEEAVLRPPPFHFS
Sbjct: 1  MKASELSSPSNTVECKERPQKPPFRPAKDDTKLLLQDPIRRSDPIETEEAVLRPPPFHFS 60

Query: 61 VPKSKNPSQMG 72
          +PKSKNPSQMG
Sbjct: 61 LPKSKNPSQMG 71

[Close]

BLAST of CcUC02G041620 vs. ExPASy TrEMBL
Match: A0A6J1K4U9 (uncharacterized protein LOC111491196 OS=Cucurbita maxima OX=3661 GN=LOC111491196 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.1e-24
Identity = 61/74 (82.43%), Postives = 65/74 (87.84%), Query Frame = 0


Query: 1  MKASELST---PTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPF 60
          M+ SELST   PTNA ECKDRP KPPFRPAKDDTKL+LQDPIRRSDPI+TEEAVLRPPPF
Sbjct: 11 MRTSELSTPTNPTNAAECKDRPLKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 70

Query: 61 HFSVPKSKNPSQMG 72
           FSV KSKN S+MG
Sbjct: 71 QFSVSKSKNSSKMG 84

[Close]

BLAST of CcUC02G041620 vs. ExPASy TrEMBL
Match: A0A1U7ZV42 (uncharacterized protein LOC104597593 OS=Nelumbo nucifera OX=4432 GN=LOC104597593 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.9e-11
Identity = 41/62 (66.13%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 1  MKASELSTPTNAVE-----CKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPP 58
          MK SE+   T+  E       D+PQKPPFRPAKDDTK +LQDPI RSDPI+TEEAVLR P
Sbjct: 1  MKGSEILIKTSESEGETKSFSDKPQKPPFRPAKDDTKPILQDPILRSDPIETEEAVLRLP 60

[Close]

BLAST of CcUC02G041620 vs. ExPASy TrEMBL
Match: A0A1Q3CXU0 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28330 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.7e-10
Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 1  MKASELSTPTNAVECK-----DRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPP 60
          M+A+E+S  +N+   +     D+PQKPPFRPAKDDTK  L DP+ RSDPI+TEEAVLR P
Sbjct: 1  MRATEISKKSNSNSNQSQLKTDKPQKPPFRPAKDDTKPALHDPLLRSDPIETEEAVLRLP 60

Query: 61 PFHFSVPK 64
          PF    PK
Sbjct: 61 PFPVIKPK 68

[Close]

BLAST of CcUC02G041620 vs. ExPASy TrEMBL
Match: W9QLE6 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013727 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.7e-10
Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 0


Query: 1  MKASELST--PTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPFH 60
          MKASE S     N  + +++P KP FRPAKDDTK +LQDPI RSDPI+TEEAVLR PPF 
Sbjct: 1  MKASESSVKPSNNYPQNREKPTKPSFRPAKDDTKPILQDPILRSDPIETEEAVLRLPPFP 60

Query: 61 FSVPKSKNP 68
          F+  ++ NP
Sbjct: 61 FA--RTTNP 67

[Close]

BLAST of CcUC02G041620 vs. TAIR 10
Match: AT2G20480.1 (unknown protein; Has 19 Blast hits to 19 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 3.8e-10
Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 0


Query: 2  KASELSTPTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPF 58
          K++E     NA     + QKPPFRPA DDTK +LQDPI RSDP++TEEAVLR P F
Sbjct: 3  KSTETPARPNATV---KTQKPPFRPAVDDTKPVLQDPILRSDPMETEEAVLRLPSF 55

The following BLAST results are available for this feature:

BLAST of CcUC02G041620 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN54090.1	3.4e-29	91.55	hypothetical protein Csa_017904 [Cucumis sativus]	[more]
KAG7035826.1	1.9e-24	82.43	hypothetical protein SDJN02_02625 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6605875.1	2.5e-24	82.43	hypothetical protein SDJN03_03192, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022995760.1	4.3e-24	82.43	uncharacterized protein LOC111491196 [Cucurbita maxima]	[more]
XP_010257524.1	1.2e-10	66.13	PREDICTED: uncharacterized protein LOC104597593 [Nelumbo nucifera] >DAD42157.1 T...	[more]

BLAST of CcUC02G041620 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC02G041620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWV8	1.7e-29	91.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280670 PE=4 SV=1	[more]
A0A6J1K4U9	2.1e-24	82.43	uncharacterized protein LOC111491196 OS=Cucurbita maxima OX=3661 GN=LOC111491196...	[more]
A0A1U7ZV42	5.9e-11	66.13	uncharacterized protein LOC104597593 OS=Nelumbo nucifera OX=4432 GN=LOC104597593...	[more]
A0A1Q3CXU0	1.7e-10	58.82	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28330 PE=4...	[more]
W9QLE6	1.7e-10	60.87	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013727 PE=4 SV=1	[more]

BLAST of CcUC02G041620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20480.1	3.8e-10	60.71	unknown protein; Has 19 Blast hits to 19 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..48
None	No IPR available	PANTHER	PTHR37207	OS09G0446000 PROTEIN	coord: 12..67
None	No IPR available	PANTHER	PTHR37207:SF1	OS09G0446000 PROTEIN	coord: 12..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G041620.1	CcUC02G041620.1	mRNA