CcUC02G041320 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G041320
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr02: 36477925 .. 36480970 (-)
RNA-Seq Expression	CcUC02G041320
Synteny	CcUC02G041320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACCAAAGGTAGATCAAGTAGGGAGTAGAGCACGTGTTCCCTCAAACTACTCTTTTATGTACGTAGTTTTGCAAATATAACAATCAGGTTCAAAATATTTGCAGATATAGTATAAGGTAAAAAAATTAAATTTGCTTTCAAAATCTATTAGTGATAGACCATATTAATAGCAAAGTCTTTCAGTGATAGGTCATATTACTGATAGAAGTCTATCGTAGATAGATTTTGTTATATTTGTAATTTTTTAAAAATATTGTTATACACTTAATTATTACTCCGAAAAGTTTTATCCAATGTAATTGTCCATATATGTTCACCACATATTAAACAAAATCCTCGGTGGAAGGAAAAATGTCTACAAGTGGTAAGGTTCGAGTCTCGACTTTTACATTTTGAAATTGTTTTCTTTTTTATTATTATTATTATTTATTATTATTTTAATAAATTTTAATAAAACATTTCATTAAGAAAATCTGAAATATACATATATTTTTAAATAATTAAATAATTAATATTCGATGGACTTCGGCTTAAGATCTGATCCAAATTCAACCCAAACTTTTATCCAAAGAGTCAAGTCCAATGGTTGAGTCCAAGAATGAGATATATTCTCCTTTTTTTTTTTTATGTCCATTACAAATTTTCTAATTATTAACTAAAATATACTATTTATTCAACAATTATTTTTAAATATAGCAAAATGTGTAAAAAAATATTTATAAATATAACAAAATATCAAGTCTATCACTGATAATCATTGATAGACTATTGTCATCTATCACTGTCTATTAGTACTAAATACTGATAGATGTCTATCGGTATCTATCATTGGTAGATAGTAACATTTTGTTATATTTCTAAATATTTTAAGCAATTTTGACATTTAAAATAATTATCCTAATTATTATCATGTTCACGTTTTATTTATAAATATGATATTTAACATTCGTATGATGCATTAGGATCTTAAAGAAGTAAAAGAAAAAAAAGGACAACAGGTCTTAAGTAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAANAAAGAAAAGAAGAGAGATTTTGAGAAGTGGGAAACCGAATCTATCAAATCAGATTTTAAAATCCAACGAGGCATCTTGTTTCTTTTGTCAAGTACCGATGGATTTTATTTTGTGAAGAAGCATACAAAATAATTATATATTTTCACTGTTTATCATTAATCAAGTTGGGCTAATGACAATCGGCTTGAGTCTTTTTGTAGGAATGATTCAAGTTTGAATATGCCGTTTGATGTCACCAAAGGTAGATCAAGTAGGGAGTAGAGCACGTGTTCCCTCAAACTACTCTTTTATGTACGTAGTTTTGCAAATATAACAATCAGGTTCAAAATATTTGCAGATATAGTATAAGGTAAAAAAATTAAATTTGCTTTCAAAATCTATTAGTGATAGACCATATTAATAGCAAAGTCTTTCAGTGATAGGTCATATTACTGATAGAAGTCTATCGTAGATAGATTTTGTTATATTTGTAATTTTTTAAAAATATTGTTATACACTTAATTATTACTCCGAAAAGTTTTATCCAATGTAATTGTCCATATATGTTCACCACATATTAAACAAAATCCTCGGTGGAAGGAAAAATGTCTACAAGTGGTAAGGTTCGAGTCTCGACTTTTACATTTTGAAATTGTTTTCTTTTTTATTATTATTATTATTTATTATTATTTTAATAAATTTTAATAAAACATTTCATTAAGAAAATCTGAAATATACATATATTTTTAAATAATTAAATAATTAATATTCGATGGACTTCGGCTTAAGATCTGATCCAAATTCAACCCAAACTTTTATCCAAAGAGTCAAGTCCAATGGTTGAGTCCAAGAATGAGATATATTCTCCTTTTTTTTTTTTATGTCCATTACAAATTTTCTAATTATTAACTAAAATATACTATTTATTCAACAATTATTTTTAAATATAGCAAAATGTGTAAAAAAATATTTATAAATATAACAAAATATCAAGTCTATCACTGATAATCATTGATAGACTATTGTCATCTATCACTGTCTATTAGTACTAAATACTGATAGATGTCTATCGGTATCTATCATTGGTAGATAGTAACATTTTGTTATATTTCTAAATATTTTAAGCAATTTTGACATTTAAAATAATTATCCTAATTATTATCATGTTCACGTTTTATTTATAAATATGATATTTAACATTCGTATGATGCATTAGGATCTTAAAGAAGTAAAAGAAAAAAAAGGACAACAGGTCTTAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAAGAATTTATCATTTATCATTTAATTCAAAGTTTCTACTTAACATGTGGATAGTTCATGCACCATTTTTTCTCGCCCTTCCTATTGTAAAAAAAAAAATAAAAATAAAAAAATAATTTCAAACTAACTCGAGGGCAGGTGCTTTAATTGGAGGGACCAATAAATAACAGTGGTCAATATATTACAAGTGTGGGGATTAAGGTATTTGCATACATATCTTATACAATAAAAATCCATTGGAAGATGGACCGCGTACCAAGATTAATTTACGGTGATCACATGTGTACTTGGATCTAGAGAACTTAATGAAAGAACTTGTTTATGAATATCAATCACCAACCAGACTTCAATTTTGATTTTATAATAACTCAACTTATAAATTTTTAAATTTATAAGACTTCAATTTTGGTTTTATATTAAGTCAACTTTTAAATTCATAAAACTATTATTTTCCTTTTAATTTACTTGTATATGGACGTGTGACGCACGTTAAACATAAAAAATAAAATAATAAATTATAAAATTTATAAAAACGTGCGATACACATGAATCGTTGCTAGTTATTCATAAAAGGGACTATTTTTGTCAATTATCAACTATTGGTATTGGATGATTGAGACAATTAATCTTATCCAAACTAATAATATAATAATAGATGGCGAGTGAGACAAAAGGAGAAGAGGCGGACGATTATTTATTTTCTGTTTGTAAAGTTTGAATCATCCTACATGTGA

mRNA sequence

ATGTCACCAAAGGATCTTAAAGAAGTAAAAGAAAAAAAAGGACAACAGGGACCAATAAATAACAGTGGTCAATATATTACAAGTGTGGGGATTAAGGTATTTGCATACATATCTTATACAATAAAAATCCATTGGAAGATGGACCGCGTACCAAGATTAATTTACGGTGATCACATATGGCGAGTGAGACAAAAGGAGAAGAGGCGGACGATTATTTATTTTCTGTTTGTAAAGTTTGAATCATCCTACATGTGA

Coding sequence (CDS)

ATGTCACCAAAGGATCTTAAAGAAGTAAAAGAAAAAAAAGGACAACAGGGACCAATAAATAACAGTGGTCAATATATTACAAGTGTGGGGATTAAGGTATTTGCATACATATCTTATACAATAAAAATCCATTGGAAGATGGACCGCGTACCAAGATTAATTTACGGTGATCACATATGGCGAGTGAGACAAAAGGAGAAGAGGCGGACGATTATTTATTTTCTGTTTGTAAAGTTTGAATCATCCTACATGTGA

Protein sequence

MSPKDLKEVKEKKGQQGPINNSGQYITSVGIKVFAYISYTIKIHWKMDRVPRLIYGDHIWRVRQKEKRRTIIYFLFVKFESSYM

Homology

The following BLAST results are available for this feature:

BLAST of CcUC02G041320 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC02G041320 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC02G041320 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC02G041320 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G041320.1	CcUC02G041320.1	mRNA