CcUC02G039320 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G039320
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Serine/arginine repetitive matrix protein 1-like
Location	CicolChr02: 34648304 .. 34648999 (+)
RNA-Seq Expression	CcUC02G039320
Synteny	CcUC02G039320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACGTCCCGCCGGTCACCGCCGTCCAACGCCTCTCCCGGAACCCTAACCCTAACCCTAACCCAACCCAACAATCCAACCGATCAACTCCATTTCACCGACGAAGATGAACTCAATCTCCTGAATTACTACCTCCAAATCGCCAGATCCGAAAACCCCACCAAGAATTCTCAACCCACTCTCGATTCTCCGACCTTGGACCGCATCCAGACCGCTCTCGGCCCCAAATTCACCCACTCCCACATCGCCGATAAGCTCCACCGCCTCAAACTCCTGTACCACAAATTCGCAAGAACCAAGTCTTTCATCAAGACTCCCCACCACCGTCAGATCCTCGAGCTCGGCCGCTGCATCTGGGGAAAATCCCCCACACCTATAACAAGAAAACCACAGGTAATTTCACCTTCACGAGCACTTTCACGAAGAATCAAACAAAGGTCAATCTCAAGACTCTCAAGGAAAGAAAAGGTTGATCTGAAGAACTATCCTGTTCTTGTGGGTGAATTTTCTCGGCTGTTTCCGGGCAATGGGGTGTGGAGAGAAGGGCTGAGGGCAATGGAAGAGAAGAGTTTGAATGATATGAATGAGAAGTGGGTTTTGTTGCATATTGAAGGGGCAGAGCTTAAGGCAAGAAGGGCTTCATTATTAAAGCAGCAACTTAGAATTACAGAGACTTCTGAAGATGTGAATTAG

mRNA sequence

ATGTCAACGTCCCGCCGGTCACCGCCGTCCAACGCCTCTCCCGGAACCCTAACCCTAACCCTAACCCAACCCAACAATCCAACCGATCAACTCCATTTCACCGACGAAGATGAACTCAATCTCCTGAATTACTACCTCCAAATCGCCAGATCCGAAAACCCCACCAAGAATTCTCAACCCACTCTCGATTCTCCGACCTTGGACCGCATCCAGACCGCTCTCGGCCCCAAATTCACCCACTCCCACATCGCCGATAAGCTCCACCGCCTCAAACTCCTGTACCACAAATTCGCAAGAACCAAGTCTTTCATCAAGACTCCCCACCACCGTCAGATCCTCGAGCTCGGCCGCTGCATCTGGGGAAAATCCCCCACACCTATAACAAGAAAACCACAGGTAATTTCACCTTCACGAGCACTTTCACGAAGAATCAAACAAAGGTCAATCTCAAGACTCTCAAGGAAAGAAAAGGTTGATCTGAAGAACTATCCTGTTCTTGTGGGTGAATTTTCTCGGCTGTTTCCGGGCAATGGGGTGTGGAGAGAAGGGCTGAGGGCAATGGAAGAGAAGAGTTTGAATGATATGAATGAGAAGTGGGTTTTGTTGCATATTGAAGGGGCAGAGCTTAAGGCAAGAAGGGCTTCATTATTAAAGCAGCAACTTAGAATTACAGAGACTTCTGAAGATGTGAATTAG

Coding sequence (CDS)

ATGTCAACGTCCCGCCGGTCACCGCCGTCCAACGCCTCTCCCGGAACCCTAACCCTAACCCTAACCCAACCCAACAATCCAACCGATCAACTCCATTTCACCGACGAAGATGAACTCAATCTCCTGAATTACTACCTCCAAATCGCCAGATCCGAAAACCCCACCAAGAATTCTCAACCCACTCTCGATTCTCCGACCTTGGACCGCATCCAGACCGCTCTCGGCCCCAAATTCACCCACTCCCACATCGCCGATAAGCTCCACCGCCTCAAACTCCTGTACCACAAATTCGCAAGAACCAAGTCTTTCATCAAGACTCCCCACCACCGTCAGATCCTCGAGCTCGGCCGCTGCATCTGGGGAAAATCCCCCACACCTATAACAAGAAAACCACAGGTAATTTCACCTTCACGAGCACTTTCACGAAGAATCAAACAAAGGTCAATCTCAAGACTCTCAAGGAAAGAAAAGGTTGATCTGAAGAACTATCCTGTTCTTGTGGGTGAATTTTCTCGGCTGTTTCCGGGCAATGGGGTGTGGAGAGAAGGGCTGAGGGCAATGGAAGAGAAGAGTTTGAATGATATGAATGAGAAGTGGGTTTTGTTGCATATTGAAGGGGCAGAGCTTAAGGCAAGAAGGGCTTCATTATTAAAGCAGCAACTTAGAATTACAGAGACTTCTGAAGATGTGAATTAG

Protein sequence

MSTSRRSPPSNASPGTLTLTLTQPNNPTDQLHFTDEDELNLLNYYLQIARSENPTKNSQPTLDSPTLDRIQTALGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGRCIWGKSPTPITRKPQVISPSRALSRRIKQRSISRLSRKEKVDLKNYPVLVGEFSRLFPGNGVWREGLRAMEEKSLNDMNEKWVLLHIEGAELKARRASLLKQQLRITETSEDVN

Homology

[Close]

BLAST of CcUC02G039320 vs. NCBI nr
Match: KGN46890.1 (hypothetical protein Csa_020607 [Cucumis sativus])

HSP 1 Score: 354.4 bits (908), Expect = 7.6e-94
Identity = 186/235 (79.15%), Postives = 201/235 (85.53%), Query Frame = 0


Query: 1   MSTSRRSPPSNASPGTLTLTLTQPNNPTDQLHFTDEDELNLLNYYLQIARSENPTKNSQP 60
           MST  RSPPS+ASP     TLTQ NN  DQLHF DEDE+NLLN YLQI+RSENPTKNS P
Sbjct: 1   MSTLHRSPPSSASPE----TLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNSLP 60

Query: 61  TLDSPTLDRIQTALGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGRCIW 120
           TLDS   DR+QTA+GPKF+HS IADKLHRLKLLYHKFARTKSFIKTPH RQIL+LGR IW
Sbjct: 61  TLDSQAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIW 120

Query: 121 GKSPTPITRKPQVISPSRALSRRIKQRSISRLSRKE----KVDLKNYPVLVGEFSRLFPG 180
           GKSPTP+TRKPQVISPSR LSRRIKQRSI   +RKE     VDLKN+PVLV EFSR FPG
Sbjct: 121 GKSPTPVTRKPQVISPSRLLSRRIKQRSI---TRKEGVGVDVDLKNFPVLVAEFSRQFPG 180

Query: 181 NGVWREGLRAMEEKSLNDMNEKWVLLHIEGAELKARRASLLKQQLRITETSEDVN 232
           NGVWR+GLR M EK+L DMNEKWVLLHIEGAELKARRA+LLK+QLR TET+EDVN
Sbjct: 181 NGVWRDGLRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLRTTETNEDVN 228

[Close]

BLAST of CcUC02G039320 vs. NCBI nr
Match: KAA0037301.1 (serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa] >TYK24183.1 serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 354.0 bits (907), Expect = 9.9e-94
Identity = 186/228 (81.58%), Postives = 199/228 (87.28%), Query Frame = 0


Query: 1   MSTSRRSPPSNASPG--TLTLTLTQPNNPTDQLHFTDEDELNLLNYYLQIARSENPTKNS 60
           MST  RS PSNASP   TLTLTLTQPNN TDQLHFTDEDE+NLL  YLQI+RSENPTKNS
Sbjct: 1   MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNS 60

Query: 61  QPTLDSPTLDRIQTALGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGRC 120
            PTLDSP  DR+QTA+GPKF+HS IADKLHRLKLLYHKFARTKSFIKTPH RQIL+LGR 
Sbjct: 61  LPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRS 120

Query: 121 IWGKSPTPITRKPQVISPSRALSRRIKQRSISRLSRKE----KVDLKNYPVLVGEFSRLF 180
           IWGKSPTPITRKPQVISPSR LSRRIKQRS    +RKE     +DLKN+PVLV EFS+ F
Sbjct: 121 IWGKSPTPITRKPQVISPSRILSRRIKQRS---STRKEGVGVDIDLKNFPVLVAEFSQQF 180

Query: 181 PGNGVWREGLRAMEEKSLNDMNEKWVLLHIEGAELKARRASLLKQQLR 223
           PGNGVWREGLR MEEK+L DMNEKWVLLHIEGAELKARRA+LLKQQL+
Sbjct: 181 PGNGVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQLK 225

[Close]

BLAST of CcUC02G039320 vs. NCBI nr
Match: KAG6570827.1 (hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 294.3 bits (752), Expect = 9.3e-76
Identity = 160/225 (71.11%), Postives = 177/225 (78.67%), Query Frame = 0


Query: 1   MSTSRRSPPSNASPGTLTLTLTQPNNPTDQLHFTDEDELNLLNYYLQIARSENPTKNSQP 60
           MST  R PPSNASP TLT             HF++EDELNLLN YLQIARS NPT NSQP
Sbjct: 1   MSTPHRFPPSNASPETLT-------------HFSEEDELNLLNCYLQIARSANPTSNSQP 60

Query: 61  TLDSPTLDRIQTALGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGRCIW 120
           TLDSP LDRI+TAL PKFT+SHIADKLHRLKL YHK ARTKS IKTPHHR+ILE+GR IW
Sbjct: 61  TLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRILEIGRSIW 120

Query: 121 GKSPTPITRKPQVISPSRALSRRIKQRSISRLSRKEKVDLKNYPVLVGEFSRLFPGNGVW 180
           GK PT  T KPQ I   RA+ RRIKQRS    S K+ VDL ++PVL+ EFSR FPGNGVW
Sbjct: 121 GKPPTSRT-KPQAI--LRAIPRRIKQRS---GSSKKGVDLNDFPVLLSEFSRRFPGNGVW 180

Query: 181 REGLRAMEEKSLNDMNEKWVLLHIEGAELKARRASLLKQQLRITE 226
           +EGLR MEEKSL DMNEKWVLLHIE AELKARRA+LL++QLR+ +
Sbjct: 181 KEGLRGMEEKSLRDMNEKWVLLHIEEAELKARRAALLQKQLRLAD 206

[Close]

BLAST of CcUC02G039320 vs. NCBI nr
Match: KAG6606028.1 (hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 270.8 bits (691), Expect = 1.1e-68
Identity = 152/231 (65.80%), Postives = 173/231 (74.89%), Query Frame = 0


Query: 1   MSTSRRSPPS---NASPGTLTLTLTQPNNPTDQLHFTDEDELNLLNYYLQIARSENPTKN 60
           MST RRSPPS    AS       LTQ      Q+HFTDEDEL+LLN YL++A S    KN
Sbjct: 1   MSTPRRSPPSTGNRASSDAAPEPLTQSQKNQLQVHFTDEDELDLLNCYLEVAGS----KN 60

Query: 61  SQPTLDSPTLDRIQTALGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGR 120
           SQPTLDSP LDRI TALG KF HSHIADKLHRLK+ YHKFARTKSFIKTPHH +ILE+GR
Sbjct: 61  SQPTLDSPALDRIATALGHKFRHSHIADKLHRLKIQYHKFARTKSFIKTPHHLRILEIGR 120

Query: 121 CIWGKSPTPITRKPQVISPSRALSRRIKQRSISRLSRKEKVDLKNYPVLVGEFSRLFPGN 180
            IWGK   P T KPQVI      SRRI+ RS+   ++K+ VDLKN+PVLV EFSR FPGN
Sbjct: 121 SIWGKPHIPRT-KPQVI------SRRIRGRSV---AKKKGVDLKNFPVLVSEFSRQFPGN 180

Query: 181 GVWREGLRAMEEKSLNDMNEKWVLLHIEGAELKARRASLLKQQLRITETSE 229
           GVWREGL+ MEE SL  MNEKWVLLHIE AELKARR +L+++Q+  T+T +
Sbjct: 181 GVWREGLKGMEEWSLKGMNEKWVLLHIEEAELKARRVALIQRQIGTTQTKD 217

[Close]

BLAST of CcUC02G039320 vs. NCBI nr
Match: XP_006424433.1 (probable transcription factor At1g11510 [Citrus clementina] >ESR37673.1 hypothetical protein CICLE_v10029167mg [Citrus clementina])

HSP 1 Score: 148.7 bits (374), Expect = 6.3e-32
Identity = 81/215 (37.67%), Postives = 132/215 (61.40%), Query Frame = 0


Query: 18  TLTLTQPNNPTDQLHFTDEDELNLLNYYLQIAR-----SENPTKNSQPTLDSPTLDRIQT 77
           T  ++ P +P  ++ FTD DE+ LL  + ++A      S + T NS  TLDS + +RI +
Sbjct: 13  TSPVSSPTSPNGRV-FTDSDEIRLLKIFKKLAEQNRSSSSSSTPNSTITLDSSSFNRINS 72

Query: 78  ALGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGRCIWGKSPTPITRKPQ 137
           +LG KFTH+ I DK+ RL++ YHK AR+KS IKTPH + + ++ + IWGK  T   ++ +
Sbjct: 73  SLGSKFTHAQITDKIRRLRVKYHKQARSKSLIKTPHDQALFKIAQLIWGKKKTNRKKEAK 132

Query: 138 VISPSRAL---SRRIKQRSISRLSR-KEKVDLKNYPVLVGEFSRLFPGNGVWREGLRAME 197
            +  S +        +Q++     R +E  +L  YPVL GE S+  P N VWRE L+++ 
Sbjct: 133 KVQNSASADDEDEGEEQKNEQNEEREREGAELDEYPVLAGELSKYLPMNLVWREALKSLG 192

Query: 198 EKSLNDMNEKWVLLHIEGAELKARRASLLKQQLRI 224
              L +MN+KW+L+ IE A++ +++A L+K+Q ++
Sbjct: 193 NDKLKEMNDKWMLIGIEEAKIVSKKADLVKEQTQL 226

[Close]

BLAST of CcUC02G039320 vs. ExPASy TrEMBL
Match: A0A0A0KAX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148320 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.7e-94
Identity = 186/235 (79.15%), Postives = 201/235 (85.53%), Query Frame = 0


Query: 1   MSTSRRSPPSNASPGTLTLTLTQPNNPTDQLHFTDEDELNLLNYYLQIARSENPTKNSQP 60
           MST  RSPPS+ASP     TLTQ NN  DQLHF DEDE+NLLN YLQI+RSENPTKNS P
Sbjct: 1   MSTLHRSPPSSASPE----TLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNSLP 60

Query: 61  TLDSPTLDRIQTALGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGRCIW 120
           TLDS   DR+QTA+GPKF+HS IADKLHRLKLLYHKFARTKSFIKTPH RQIL+LGR IW
Sbjct: 61  TLDSQAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIW 120

Query: 121 GKSPTPITRKPQVISPSRALSRRIKQRSISRLSRKE----KVDLKNYPVLVGEFSRLFPG 180
           GKSPTP+TRKPQVISPSR LSRRIKQRSI   +RKE     VDLKN+PVLV EFSR FPG
Sbjct: 121 GKSPTPVTRKPQVISPSRLLSRRIKQRSI---TRKEGVGVDVDLKNFPVLVAEFSRQFPG 180

Query: 181 NGVWREGLRAMEEKSLNDMNEKWVLLHIEGAELKARRASLLKQQLRITETSEDVN 232
           NGVWR+GLR M EK+L DMNEKWVLLHIEGAELKARRA+LLK+QLR TET+EDVN
Sbjct: 181 NGVWRDGLRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLRTTETNEDVN 228

[Close]

BLAST of CcUC02G039320 vs. ExPASy TrEMBL
Match: A0A5A7T6T1 (Serine/arginine repetitive matrix protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1754G00170 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.8e-94
Identity = 186/228 (81.58%), Postives = 199/228 (87.28%), Query Frame = 0


Query: 1   MSTSRRSPPSNASPG--TLTLTLTQPNNPTDQLHFTDEDELNLLNYYLQIARSENPTKNS 60
           MST  RS PSNASP   TLTLTLTQPNN TDQLHFTDEDE+NLL  YLQI+RSENPTKNS
Sbjct: 1   MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNS 60

Query: 61  QPTLDSPTLDRIQTALGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGRC 120
            PTLDSP  DR+QTA+GPKF+HS IADKLHRLKLLYHKFARTKSFIKTPH RQIL+LGR 
Sbjct: 61  LPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRS 120

Query: 121 IWGKSPTPITRKPQVISPSRALSRRIKQRSISRLSRKE----KVDLKNYPVLVGEFSRLF 180
           IWGKSPTPITRKPQVISPSR LSRRIKQRS    +RKE     +DLKN+PVLV EFS+ F
Sbjct: 121 IWGKSPTPITRKPQVISPSRILSRRIKQRS---STRKEGVGVDIDLKNFPVLVAEFSQQF 180

Query: 181 PGNGVWREGLRAMEEKSLNDMNEKWVLLHIEGAELKARRASLLKQQLR 223
           PGNGVWREGLR MEEK+L DMNEKWVLLHIEGAELKARRA+LLKQQL+
Sbjct: 181 PGNGVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQLK 225

[Close]

BLAST of CcUC02G039320 vs. ExPASy TrEMBL
Match: V4RSW9 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029167mg PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.1e-32
Identity = 81/215 (37.67%), Postives = 132/215 (61.40%), Query Frame = 0


Query: 18  TLTLTQPNNPTDQLHFTDEDELNLLNYYLQIAR-----SENPTKNSQPTLDSPTLDRIQT 77
           T  ++ P +P  ++ FTD DE+ LL  + ++A      S + T NS  TLDS + +RI +
Sbjct: 13  TSPVSSPTSPNGRV-FTDSDEIRLLKIFKKLAEQNRSSSSSSTPNSTITLDSSSFNRINS 72

Query: 78  ALGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGRCIWGKSPTPITRKPQ 137
           +LG KFTH+ I DK+ RL++ YHK AR+KS IKTPH + + ++ + IWGK  T   ++ +
Sbjct: 73  SLGSKFTHAQITDKIRRLRVKYHKQARSKSLIKTPHDQALFKIAQLIWGKKKTNRKKEAK 132

Query: 138 VISPSRAL---SRRIKQRSISRLSR-KEKVDLKNYPVLVGEFSRLFPGNGVWREGLRAME 197
            +  S +        +Q++     R +E  +L  YPVL GE S+  P N VWRE L+++ 
Sbjct: 133 KVQNSASADDEDEGEEQKNEQNEEREREGAELDEYPVLAGELSKYLPMNLVWREALKSLG 192

Query: 198 EKSLNDMNEKWVLLHIEGAELKARRASLLKQQLRI 224
              L +MN+KW+L+ IE A++ +++A L+K+Q ++
Sbjct: 193 NDKLKEMNDKWMLIGIEEAKIVSKKADLVKEQTQL 226

[Close]

BLAST of CcUC02G039320 vs. ExPASy TrEMBL
Match: A0A2H5MZL8 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_281630 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 3.4e-31
Identity = 83/225 (36.89%), Postives = 135/225 (60.00%), Query Frame = 0


Query: 11  NASPGTLTLTLTQP-NNPTDQ--LHFTDEDELNLLNYYLQIAR-----SENPTKNSQPTL 70
           +++P       T P ++PT Q    FTD DE+ LL  + ++A      S + T NS  TL
Sbjct: 2   SSTPRKRKQVATSPVSSPTSQNGRVFTDSDEIRLLKIFKKLAEQNRSSSSSSTPNSTITL 61

Query: 71  DSPTLDRIQTALGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGRCIWGK 130
           DS + +RI ++LG KFTH+ I DK+ RL++ YHK AR+KS +KTPH + + ++ + IWGK
Sbjct: 62  DSSSFNRINSSLGSKFTHAQITDKIRRLRVKYHKQARSKSLVKTPHDQALFKIAQLIWGK 121

Query: 131 SPTPITRKPQVISPSRAL---SRRIKQRSISRLSR-KEKVDLKNYPVLVGEFSRLFPGNG 190
             T   ++ + +  S +        +Q++     R +E  +L  YPVL GE S+  P N 
Sbjct: 122 KKTNRKKEAKKVQNSASADDEDEGEEQKNEQNEEREREGAELDEYPVLAGELSKYLPMNL 181

Query: 191 VWREGLRAMEEKSLNDMNEKWVLLHIEGAELKARRASLLKQQLRI 224
           VWRE L+++    L +MN+KW+L+ IE A++ +++A L+K+Q ++
Sbjct: 182 VWREALKSLGNDKLKEMNDKWMLIGIEEAKIVSKKADLVKEQTQL 226

[Close]

BLAST of CcUC02G039320 vs. ExPASy TrEMBL
Match: A0A6P3Z773 (probable transcription factor At1g61730 OS=Ziziphus jujuba OX=326968 GN=LOC107410682 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 8.3e-30
Identity = 92/236 (38.98%), Postives = 135/236 (57.20%), Query Frame = 0


Query: 2   STSRRSPPSNASPGTLTLTLTQPN----NPTDQLH----------FTDEDELNLLNYYLQ 61
           S+S+R+ PS+ SP T T T  QP+    +P +Q            FT+EDE +LL  +  
Sbjct: 9   SSSKRNKPSSNSPTTTTNT-KQPSSSSRSPPEQFSGSQKIRPQRLFTEEDETHLLQIFYH 68

Query: 62  IARSENPTKNSQPTLDSPTLDRIQTALGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTP 121
           I +S  P+      ++SP LDRI+ +LG +F+H+ I DKL RL+L YHK ARTKS IKT 
Sbjct: 69  ITKSSPPSS----AINSPNLDRIEKSLGLRFSHTQIIDKLRRLRLKYHKQARTKSLIKTH 128

Query: 122 HHRQILELGRCIWGKSPTPITRKPQVISPSRALSRRIKQRSISRLSRKEKVDLKNYPVLV 181
           H R++ ++ R IWG+            S SR   +  +++      R   V L+ +PVL 
Sbjct: 129 HDREVYKIARKIWGRKG----------SNSRG-GKTEEEKEKEEEQRIGDVGLEEFPVLK 188

Query: 182 GEFSRLFPGNGVWREGLRAMEEKSLNDMNEKWVLLHIEGAELKARRASLLKQQLRI 224
            E   +  GN VW++GL  +EEK+L  +NEKW+LL +E AE+ A RA L K+ + +
Sbjct: 189 HEAFGVLQGNVVWKKGLMGLEEKTLKGLNEKWMLLKMEEAEVMATRAELEKEVVEL 228

The following BLAST results are available for this feature:

BLAST of CcUC02G039320 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46890.1	7.6e-94	79.15	hypothetical protein Csa_020607 [Cucumis sativus]	[more]
KAA0037301.1	9.9e-94	81.58	serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa] >TYK...	[more]
KAG6570827.1	9.3e-76	71.11	hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6606028.1	1.1e-68	65.80	hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_006424433.1	6.3e-32	37.67	probable transcription factor At1g11510 [Citrus clementina] >ESR37673.1 hypothet...	[more]

BLAST of CcUC02G039320 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC02G039320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAX7	3.7e-94	79.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148320 PE=3 SV=1	[more]
A0A5A7T6T1	4.8e-94	81.58	Serine/arginine repetitive matrix protein 1-like OS=Cucumis melo var. makuwa OX=...	[more]
V4RSW9	3.1e-32	37.67	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029167mg PE=3 ...	[more]
A0A2H5MZL8	3.4e-31	36.89	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_281630 PE=3 SV=1	[more]
A0A6P3Z773	8.3e-30	38.98	probable transcription factor At1g61730 OS=Ziziphus jujuba OX=326968 GN=LOC10741...	[more]

BLAST of CcUC02G039320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007592	GLABROUS1 enhancer-binding protein family	PFAM	PF04504	DUF573	coord: 32..121 e-value: 2.1E-8 score: 34.7
IPR007592	GLABROUS1 enhancer-binding protein family	PANTHER	PTHR31662	BNAANNG10740D PROTEIN-RELATED	coord: 5..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR31662:SF39	SUBFAMILY NOT NAMED	coord: 5..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G039320.1	CcUC02G039320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus